ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl01g01 |
|---|---|
| Clone Library Name | barley_pub |
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 186 bits (472), Expect = 2e-47 Identities = 90/126 (71%), Positives = 108/126 (85%) Frame = +1 Query: 70 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GGI+ +TG + + LKG+VVLMRKN LD NDFGATV+DG+ E LG+GVTCQLISST V Sbjct: 2 LGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTAV 61 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 429 D NNG RGKVGAEA+LEQW L ++LP +TTGE++F VTFDW VDKLGVPGAIIVKN+H++ Sbjct: 62 DPNNGNRGKVGAEASLEQW-LTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIVKNHHSN 120 Query: 430 EFFLKT 447 EFFLKT Sbjct: 121 EFFLKT 126
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 186 bits (472), Expect = 2e-47 Identities = 90/126 (71%), Positives = 109/126 (86%) Frame = +1 Query: 70 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GGI+ LTG + A LKGS+VLMRKNALD NDFGATV+DG++E LGRGVTCQL+SS+ V Sbjct: 2 LGGIIGGLTGN-KNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSLV 60 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 429 D NNG RG+VG EA+LEQWL T+LP +TTGE+KF VTF+W V+K+G+PGAIIVKNNHA+ Sbjct: 61 DPNNGNRGRVGTEASLEQWL--TSLPSLTTGESKFGVTFEWEVEKMGIPGAIIVKNNHAA 118 Query: 430 EFFLKT 447 EFFLKT Sbjct: 119 EFFLKT 124
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 183 bits (464), Expect = 2e-46 Identities = 87/126 (69%), Positives = 105/126 (83%) Frame = +1 Query: 70 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GG++ LTG + A LKG+VVLMRKN LD NDFGAT++DG+ E LG+GVTCQLISST V Sbjct: 3 LGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAV 62 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 429 D +NGGRGKVGAEA LEQW+ T+LP +TTGE+KF +TFDW V+KLGVPGAI+V N H+S Sbjct: 63 DQDNGGRGKVGAEAELEQWV--TSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVNNYHSS 120 Query: 430 EFFLKT 447 EF LKT Sbjct: 121 EFLLKT 126
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 132 bits (331), Expect = 5e-31 Identities = 67/126 (53%), Positives = 90/126 (71%) Frame = +1 Query: 70 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNV 249 +GG+ LTG G +KG VLM + LD DF A+++D V E+ G +TCQL+S+T Sbjct: 2 LGGLKDKLTGK-NGNKIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATVA 60 Query: 250 DHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHAS 429 D NN GRG VG+EANLEQ L T+LP ++ GE+K V F+W +DK GVPGAII+KN+H++ Sbjct: 61 DQNNEGRGIVGSEANLEQGL--TDLPSVSQGESKLTVRFNWEMDKHGVPGAIIIKNHHST 118 Query: 430 EFFLKT 447 +FFLKT Sbjct: 119 KFFLKT 124
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 117 bits (292), Expect = 2e-26 Identities = 65/127 (51%), Positives = 87/127 (68%), Gaps = 1/127 (0%) Frame = +1 Query: 70 VGGIVSDLTGGLRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLIS-STN 246 +GGIV + G +KG V+LM+KN LDF + GA+V+DG+++LLG+ V+ QLIS S N Sbjct: 3 LGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISGSVN 62 Query: 247 VDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHA 426 D G GK+ A LE WL T++ IT GE+ F+VTFDW D+ GVPGA I+KN H Sbjct: 63 YD---GLEGKLSNPAYLESWL--TDITPITAGESTFSVTFDWDRDEFGVPGAFIIKNLHL 117 Query: 427 SEFFLKT 447 +EFFLK+ Sbjct: 118 NEFFLKS 124
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 112 bits (279), Expect = 5e-25 Identities = 58/122 (47%), Positives = 80/122 (65%), Gaps = 3/122 (2%) Frame = +1 Query: 91 LTGG---LRGAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNN 261 LTGG +KG+VVLM+KN LDFNDF A+ +D + E LG +T +L+SS D N Sbjct: 9 LTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVSSDVTDSEN 68 Query: 262 GGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEFFL 441 G +GK+G A+LE W+ T + +T GE+ F VTFD+ D G PGA +++N+H SEF L Sbjct: 69 GSKGKLGKAAHLEDWI--TTITSLTAGESAFKVTFDYETD-FGYPGAFLIRNSHFSEFLL 125 Query: 442 KT 447 K+ Sbjct: 126 KS 127
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 107 bits (266), Expect = 2e-23 Identities = 60/128 (46%), Positives = 81/128 (63%), Gaps = 5/128 (3%) Frame = +1 Query: 79 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 243 ++ L GGL G H +KG+VV+M+KNALDF D ++ D + E LG+ V+ QLISS Sbjct: 1 MLGQLVGGLIGGHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSV 60 Query: 244 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH 423 D NG +GK A LE +LL L + GE F VTFDW+ ++ GVPGA ++KN H Sbjct: 61 QSDPANGLQGKHSNPAYLENFLL--TLTPLAAGETAFGVTFDWN-EEFGVPGAFVIKNMH 117 Query: 424 ASEFFLKT 447 +EFFLK+ Sbjct: 118 INEFFLKS 125
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 98.6 bits (244), Expect = 6e-21 Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 5/128 (3%) Frame = +1 Query: 79 IVSDLTGGLRGAH-----LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 243 ++ +T GL G H +KG+VV+M KN LDF D ++ + ++LG+ V+ QLISS Sbjct: 1 MIGQITSGLFGGHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSV 60 Query: 244 NVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNH 423 D NG +GK A LE L T P E F VTFDW+ ++ GVPGA I+KN H Sbjct: 61 QGDPTNGLQGKHSNPAYLENSLF-TLTPLTAGSETAFGVTFDWN-EEFGVPGAFIIKNMH 118 Query: 424 ASEFFLKT 447 +EFFLK+ Sbjct: 119 INEFFLKS 126
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 95.9 bits (237), Expect = 4e-20 Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 6/132 (4%) Frame = +1 Query: 70 VGGIVSDLTGGLRGA----HLKGSVVLMRKNALDFNDFGATVMDGVTELLGR--GVTCQL 231 V G LTG + A ++G+ VL++K+ L DF A+++DGV +LG GV +L Sbjct: 3 VQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAFRL 62 Query: 232 ISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIV 411 +S+T D +NGGRGK+G A+LE+ L + GE+ F V F+W + G+PGA++V Sbjct: 63 VSATARDPSNGGRGKLGKPAHLEE--LVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119 Query: 412 KNNHASEFFLKT 447 N++ SEFFLKT Sbjct: 120 TNSNRSEFFLKT 131
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 88.2 bits (217), Expect = 8e-18 Identities = 58/139 (41%), Positives = 80/139 (57%), Gaps = 19/139 (13%) Frame = +1 Query: 88 DLTGGLRGAH-LKGSVVLMRKNALDFN--------------DFGATV----MDGVTELLG 210 ++TG L H ++G+VVLMRKN LDFN D G + +DG+T LG Sbjct: 4 NVTGLLNKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLG 63 Query: 211 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLG 390 R V+ QLIS+T D N G+GKVG + LE L +LP + GE+ F + F+W ++G Sbjct: 64 RSVSLQLISATKSDAN--GKGKVGKDTFLEGVL--ASLPTLGAGESAFNIHFEWD-HEMG 118 Query: 391 VPGAIIVKNNHASEFFLKT 447 +PGA +KN EFFLK+ Sbjct: 119 IPGAFYIKNYMQVEFFLKS 137
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 84.7 bits (208), Expect = 9e-17 Identities = 57/148 (38%), Positives = 79/148 (53%), Gaps = 19/148 (12%) Frame = +1 Query: 61 MFGVGGIVSDLTGGLRGAH-LKGSVVLMRKNALDFNDFG------------------ATV 183 MF V G+ L G G H +KG+VVLMRKN LDFN + Sbjct: 1 MFSVPGVSGILNRG--GGHKIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGST 58 Query: 184 MDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVT 363 +D +T LGR V QLIS+T N G+GKVG + LE ++ +LP + GE+ F + Sbjct: 59 LDNLTAFLGRSVALQLISATKPLAN--GKGKVGKDTFLEGIIV--SLPTLGAGESAFNIQ 114 Query: 364 FDWSVDKLGVPGAIIVKNNHASEFFLKT 447 F+W + +G+PGA +KN EF+LK+ Sbjct: 115 FEWD-ESMGIPGAFYIKNYMQVEFYLKS 141
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 84.3 bits (207), Expect = 1e-16 Identities = 50/113 (44%), Positives = 70/113 (61%) Frame = +1 Query: 109 GAHLKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAE 288 G +KG+VVLM KN L+ N G+ V D + LGR V+ QLIS+T D + G+GKVG + Sbjct: 5 GHKIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKD 61 Query: 289 ANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNNHASEFFLKT 447 LE + T+LP + GE+ F + F+W +G+PGA +KN EFFLK+ Sbjct: 62 TFLEG--INTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYIKNYMQVEFFLKS 111
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 83.2 bits (204), Expect = 3e-16 Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 14/133 (10%) Frame = +1 Query: 85 SDLTGGL-RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVT 222 S +TG L RG +KG+VVLMRKN LD N D + +D +T LGR V+ Sbjct: 3 SGVTGILNRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVS 62 Query: 223 CQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGA 402 QLIS+T D G+GK+G LE + ++LP + G++ F + F+W D +G+PGA Sbjct: 63 LQLISATKPDAT--GKGKLGKATFLEG--IISSLPTLGAGQSAFKIHFEWD-DDMGIPGA 117 Query: 403 IIVKNNHASEFFL 441 +KN +EFFL Sbjct: 118 FYIKNFMQTEFFL 130
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 79.3 bits (194), Expect = 4e-15 Identities = 53/132 (40%), Positives = 73/132 (55%), Gaps = 15/132 (11%) Frame = +1 Query: 91 LTGGL--RGAHLKGSVVLMRKNALDFN-------------DFGATVMDGVTELLGRGVTC 225 + GGL RG +KG+VVLMRKN L N D + +D +T LGR V+ Sbjct: 1 MLGGLLHRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFLGRPVSL 60 Query: 226 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 405 QLIS+T D N G+GK+G LE + T+LP + G++ F + F+W D G+ GA Sbjct: 61 QLISATKADAN--GKGKLGKATFLEG--IITSLPTLGAGQSAFKINFEWD-DGSGILGAF 115 Query: 406 IVKNNHASEFFL 441 +KN +EFFL Sbjct: 116 YIKNFMQTEFFL 127
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 76.6 bits (187), Expect = 3e-14 Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 22/134 (16%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 219 +G +KG+VVLM KN LDFN + V+D T LGR + Sbjct: 7 KGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRNI 66 Query: 220 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 399 + QLIS+T D G GKVG E LE+ LPT LP + ++ F++ F+W G+PG Sbjct: 67 SMQLISATQTD--GSGNGKVGKEVYLEKH-LPT-LPTLGARQDAFSIFFEWDA-SFGIPG 121 Query: 400 AIIVKNNHASEFFL 441 A +KN EFFL Sbjct: 122 AFYIKNFMTDEFFL 135
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 74.7 bits (182), Expect = 1e-13 Identities = 49/134 (36%), Positives = 68/134 (50%), Gaps = 22/134 (16%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFNDFGAT----------------------VMDGVTELLGRGV 219 RG +KG+VVLM KN DFN+F +T ++DG T + R + Sbjct: 7 RGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRNI 66 Query: 220 TCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPG 399 QLIS+T D G GKVG + LE+ L +LP + ++ F V F+W + G+P Sbjct: 67 AIQLISATKTD--GLGNGKVGKQTFLEKHL--PSLPNLGDRQDAFNVYFEWD-ENFGIPE 121 Query: 400 AIIVKNNHASEFFL 441 A +KN SEFFL Sbjct: 122 AFYIKNFMQSEFFL 135
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 72.4 bits (176), Expect = 5e-13 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 13/129 (10%) Frame = +1 Query: 100 GLRGAHLKGSVVLMRKNALDFND-------------FGATVMDGVTELLGRGVTCQLISS 240 G +G +KG++V+M+KN LD N F + +D +T ++ QLIS+ Sbjct: 5 GQKGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLGFIGSAVDALT-FAATKISIQLISA 63 Query: 241 TNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAIIVKNN 420 T D GG+GK+G NL + LP + GE + V F+W D G+PGA +KN Sbjct: 64 TKAD---GGKGKIGKSTNLRGKI---TLPTLGAGEQAYDVNFEWDSD-FGIPGAFYIKNF 116 Query: 421 HASEFFLKT 447 +EF+LK+ Sbjct: 117 MQNEFYLKS 125
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 69.7 bits (169), Expect = 3e-12 Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 21/133 (15%) Frame = +1 Query: 106 RGAHLKGSVVLMRKNALDFN--------------------DFGATVMDGVTELLGRGVTC 225 RG LKG+V+LM+KN LD N +++D T LGR V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 226 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 405 +LIS+T D + G+GKV EA LE L T++P + ++ F+V F+W +G PGA Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLL--TSIPTLGDKQSAFSVHFEWD-SNMGTPGAF 122 Query: 406 IVKN-NHASEFFL 441 ++N EFFL Sbjct: 123 YIENFMQGGEFFL 135
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 40.4 bits (93), Expect = 0.002 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 1/111 (0%) Frame = +1 Query: 118 LKGSVVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANL 297 L+ ++ + RK D + A +D + +++GR V +LIS+ H + ++ Sbjct: 80 LRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKI--HPRTKKPMQSGRVSI 137 Query: 298 EQWLLPTNLPFITTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASEFFLKT 447 + W G++ T +++VD G PGAI V N H EFFL++ Sbjct: 138 KDWCQKRG----AKGDH-VVYTAEFTVDADFGEPGAIAVANRHNREFFLES 183
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 37.4 bits (85), Expect = 0.017 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Frame = +1 Query: 130 VVLMRKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWL 309 V + R+ D D A +D + + +GR V +L+S T D G K A L W Sbjct: 72 VTVRRRRKEDAKDRFAEQLDALADRVGRSVLLELVS-TETDPRKGTPKKSKPSA-LVGWF 129 Query: 310 LPTNLPFITTGENKFAVTFDWSVDK-LGVPGAIIVKNNHASEFFLKT 447 ++ + T +++VD G PGA+ V N H EF++++ Sbjct: 130 DKKDVK-----AERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIES 171
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 35.4 bits (80), Expect = 0.065 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 5/73 (6%) Frame = -2 Query: 269 RPPLLWSTLVELMSWQVTPRPRSSVT-----PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 R P L++ L S PRPRS+ PS AP + + R+ PL W P+ Sbjct: 228 RSPDLFTPLSRPPSPLSLPRPRSAPARRPPAPSGDTAPPARPHTPLSRIDVRPPLDWGPQ 287 Query: 104 RPPVRSLTMPPTP 66 R ++L+ PPTP Sbjct: 288 R---QTLSRPPTP 297
>YAI7_SCHPO (Q09894) Hypothetical protein C24B11.07c in chromosome I| Length = 561 Score = 34.7 bits (78), Expect = 0.11 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Frame = -2 Query: 314 GRSHCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMR 135 G+ + R SAP+ + + + ++++S RS +PS+ +SLKS R Sbjct: 374 GKPNMGRIPSAPSLSKGRAMTADNMDMLSLTTRRSRRSLYSPSLMQMQQSLKSDYEGLGR 433 Query: 134 TTEPLRWAPR-RPPVR 90 T +P R+APR PPVR Sbjct: 434 TFDP-RFAPRGSPPVR 448
>CAGE_HELPY (Q48252) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 32.3 bits (72), Expect = 0.55 Identities = 23/70 (32%), Positives = 32/70 (45%) Frame = +1 Query: 226 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 405 QLI++ DHN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 406 IVKNNHASEF 435 + NN S F Sbjct: 798 FLDNNDVSPF 807
>CAGE_HELPJ (Q9ZLT4) CAG pathogenicity island protein 23 (Protein picB)| Length = 983 Score = 32.3 bits (72), Expect = 0.55 Identities = 23/70 (32%), Positives = 32/70 (45%) Frame = +1 Query: 226 QLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFITTGENKFAVTFDWSVDKLGVPGAI 405 QLI++ DHN+ G A L + TN F +NK D+S +GV G+ Sbjct: 742 QLINAFGKDHNDPN----GLVARLAPFCKSTNGEFQWLFDNKATDRLDFSKTIIGVDGSS 797 Query: 406 IVKNNHASEF 435 + NN S F Sbjct: 798 FLDNNDVSPF 807
>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor| (EGF-like domain-containing protein 5) (Multiple EGF-like domain protein 5) Length = 600 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = -2 Query: 305 HCSRFASAPTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTE 126 H S P+ P P L ST+ + + V ++S TP A +SS + T Sbjct: 128 HTPTTESPPSRPAPTTLASTVGQPPTTSVVTTAQASSTPGTPTAESPDRSSNSSGVPPTA 187 Query: 125 PLRWAPRRPP 96 P+ AP PP Sbjct: 188 PVTEAPTSPP 197
>UL14_EHV1V (P84404) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 1.6 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 180 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 4 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>UL14_EHV1B (P28949) Hypothetical gene 48 protein| Length = 317 Score = 30.8 bits (68), Expect = 1.6 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -1 Query: 180 GGAEVVEVERVLAHEDDGAL-EVGAPEAPRQVAHDAADAKHLRSISGECGTLAKLARCGA 4 GG EV + + L HED+ L EAPR AAD RS + ARCGA Sbjct: 132 GGGEVGDPQEWLGHEDEALLMRWMLEEAPRVSTRIAADPHSPRSTCPAPRKAPEDARCGA 191
>USH1C_MOUSE (Q9ES64) Harmonin (Usher syndrome type-1C protein homolog) (PDZ| domain-containing protein) Length = 910 Score = 30.4 bits (67), Expect = 2.1 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -2 Query: 221 VTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTPNI 60 V P P S +PS AP L SS + ++ W R PP + +PP P+I Sbjct: 563 VMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP---WVQRTPP--PIPIPPPPSI 611
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = -2 Query: 404 MAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFASAPTFPRPPLLWSTLVELMSW 225 +APGTP + ++S++T + HCS + P P + WS L + W Sbjct: 2528 VAPGTPQVQVEESELT--------LEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 224 Q 222 Q Sbjct: 2576 Q 2576
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 2.7 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -2 Query: 278 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 T P PP M+ +TP P S+ T P+ T +P + ++ T P P Sbjct: 1498 TTPSPP---------MTTPITP-PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPI 1547 Query: 104 RPPVRSLTMPPT 69 PP + T+PPT Sbjct: 1548 TPPTSTTTLPPT 1559 Score = 29.6 bits (65), Expect = 3.5 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 4/74 (5%) Frame = -2 Query: 278 TFPRPPLLWSTLVELMSWQVTPRPRSSVT----PSMTVAPKSLKSSAFLRMRTTEPLRWA 111 T P PP + +T + TP P ++ T P+ T +P + TT P Sbjct: 1584 TTPSPPTITTTTPPPTT---TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640 Query: 110 PRRPPVRSLTMPPT 69 P PP + T PPT Sbjct: 1641 PSPPPTTTTTPPPT 1654 Score = 29.3 bits (64), Expect = 4.6 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Frame = -2 Query: 278 TFPRPPLLWSTLVELMSWQVTPRPRSSVT--PSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 T P PP+ +T + TP P ++ P+ T +P + ++ T P P Sbjct: 1452 TTPSPPISTTTTPPPTT---TPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPI 1508 Query: 104 RPPVRSLTMPPT 69 PP + T+PPT Sbjct: 1509 TPPASTTTLPPT 1520
>TRPM2_HUMAN (O94759) Transient receptor potential cation channel subfamily M| member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen-responsive element-associated Length = 1503 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 136 LMRKNALDFNDFGATVMDGVTELLGRGVTCQLISST 243 LM+K AL F+DF + G L G+TC+LI +T Sbjct: 856 LMKKAALYFSDFWNKLDVGAILLFVAGLTCRLIPAT 891
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 29.6 bits (65), Expect = 3.5 Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = -1 Query: 183 DGGAEVVEVERVLAHEDDG-----ALEVGAPEAPRQVAH-DAADAKHLRSISG 43 DGGA V+ ER A +D+G E G+PE + H D D KH RS SG Sbjct: 15 DGGATPVQDERDSASDDEGNEREQRSEPGSPERQSEDEHSDIEDNKH-RSDSG 66
>NPAS3_HUMAN (Q8IXF0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 933 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -2 Query: 218 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 129 TP P S +PS+ +L+ S F+RM++T Sbjct: 241 TPEPVESTSPSLLTTDNTLERSFFIRMKST 270
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 29.3 bits (64), Expect = 4.6 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Frame = -2 Query: 281 PTFPRP-PLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 P P+P P ++ + S P P++S P+ T +PK T+P + Sbjct: 84 PATPKPTPPTYTPSPKPKSPVYPPPPKASTPPTYTPSPKP---------PATKPPTYPTP 134 Query: 104 RPPVRSLTMPPTPNIF 57 +PP T PPTP ++ Sbjct: 135 KPPA---TKPPTPPVY 147
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 4.6 Identities = 22/74 (29%), Positives = 30/74 (40%) Frame = -2 Query: 284 APTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPR 105 AP PP + + V M V +P SSV P+ T +L S P AP+ Sbjct: 1480 APVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA-TAPSSTLPPSQSSFAHVPSPAPPAPQ 1538 Query: 104 RPPVRSLTMPPTPN 63 P +L+ P N Sbjct: 1539 HPSAAALSSAPADN 1552
>PROML_BRARE (Q9W735) Prominin-like protein (Fragment)| Length = 713 Score = 29.3 bits (64), Expect = 4.6 Identities = 21/83 (25%), Positives = 36/83 (43%) Frame = +1 Query: 142 RKNALDFNDFGATVMDGVTELLGRGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTN 321 RKNA F DF T++ T ++ GV C ++ N+ G + L+ +N Sbjct: 144 RKNADCFEDFLTTLLLTTTFIITAGVLCAYAANQNLSSQLKGMRR----------LVKSN 193 Query: 322 LPFITTGENKFAVTFDWSVDKLG 390 L + T N+ D+ + + G Sbjct: 194 LKDLHTFANQTPAQIDYLISRYG 216
>RMT2_ASHGO (Q759W1) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 413 Score = 29.3 bits (64), Expect = 4.6 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%) Frame = +1 Query: 283 AEANLEQWLLPTNLPFI----TTGENKFAVTFDWSVDKLGVPGAIIVKNNHASE 432 A A + L T L +I T N+ V DW D + V A IVKN +E Sbjct: 191 ATAAHQDTYLQTELEYIPGALVTKHNRDGVMMDWETDIMRVAAASIVKNREPAE 244
>PYRH_DEIRA (Q9RU81) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 6.0 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 40 LPRDRAKMFGVGG----IVSDLTGGLRGAHLKGSVVLMRKNALD 159 L + R +FG G +D T LR + VVLM KNA+D Sbjct: 127 LEKGRVVIFGGGNGAPFFTTDTTSTLRALEIGADVVLMAKNAVD 170
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 28.9 bits (63), Expect = 6.0 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = -1 Query: 183 DGGAEVVEVERVLAHEDDG---ALEVGAPEAPRQVAH-DAADAKH 61 DGGA V+ ER A +D+G E G+PE + H D D KH Sbjct: 13 DGGATPVQDERDSASDDEGNEQRSEPGSPEHQSEDEHSDVEDHKH 57
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 28.9 bits (63), Expect = 6.0 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -2 Query: 281 PTFPRPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPL-RWAPR 105 PT + PL E+ TP P S P APK +K+ A L + P +P Sbjct: 1245 PTSKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPA 1304 Query: 104 RPPVRSLTMPP 72 R P +L PP Sbjct: 1305 RQPPAALAKPP 1315
>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)| Length = 279 Score = 28.9 bits (63), Expect = 6.0 Identities = 19/51 (37%), Positives = 20/51 (39%) Frame = -2 Query: 218 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRSLTMPPTP 66 TP P S TPS T P S T P P P S T PP+P Sbjct: 136 TPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSP---TPTPSPTPSPTPPPSP 183
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 215 PRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVRS 87 P P SS TP++ V P + ++ L +T+P P+ PV S Sbjct: 1026 PPPASSATPALHVQPLAPAAAPSLLQASTQPEVLLPKPAPVYS 1068
>TLP_PRUAV (P50694) Thaumatin-like protein precursor| Length = 245 Score = 28.5 bits (62), Expect = 7.9 Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 10/51 (19%) Frame = -2 Query: 407 MMAPGT------PSLSTD----QSKVTANLFSPVVMNGRFVGRSHCSRFAS 285 M+ PGT P LST S+ + L +PV NGRF R+ CS AS Sbjct: 35 MVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 85
>HUNB_DROIK (O46242) Protein hunchback (Fragments)| Length = 193 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = -2 Query: 269 RPPLLWSTLVELMSWQVTPRPRSSVTPSMTVAPKSLKSSAFLRMRTTEPLRWAPRRPPVR 90 RPP L + + +M + P P ++ T + T A S ++A + +++ + L+ P Sbjct: 101 RPPGLPNPMQTIMPANMRPSPTATTTATTTAAAASTTTAATVALQSNDKLQ---ALTPPM 157 Query: 89 SLTMPPTP 66 +T P +P Sbjct: 158 DVTPPKSP 165
>NPAS3_MOUSE (Q9QZQ0) Neuronal PAS domain protein 3 (Neuronal PAS3) (Member of| PAS protein 6) (MOP6) Length = 925 Score = 28.5 bits (62), Expect = 7.9 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -2 Query: 218 TPRPRSSVTPSMTVAPKSLKSSAFLRMRTT 129 TP P + +PS+ +L+ S F+RM++T Sbjct: 246 TPEPVETTSPSLLTTDNTLERSFFIRMKST 275
>SIPD_SALTY (Q56026) Cell invasion protein sipD (Salmonella invasion protein D)| Length = 343 Score = 28.5 bits (62), Expect = 7.9 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%) Frame = +1 Query: 226 QLISSTNVDHNNGGRG-KVGAEANLEQWLLPTNLP--FITTGENKFAVTFDWS------- 375 Q+ S+T + G G KV EA QWL NLP + + + + VT D + Sbjct: 207 QINSNTVLFPAQSGSGVKVATEAEARQWLSELNLPNSCLKSYGSGYVVTVDLTPLQKMVQ 266 Query: 376 -VDKLGVPG 399 +D LG PG Sbjct: 267 DIDGLGAPG 275
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 111 APEAPRQVAHDAADAKHLRSISGECG 34 AP AP++ AAD H+ S G CG Sbjct: 74 APPAPQKPTQQAADLNHILSERGACG 99
>PEPP2_HUMAN (Q9BQY4) Paired-like homeobox protein PEPP-2 (Testis homeobox gene| 1) Length = 288 Score = 28.5 bits (62), Expect = 7.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -2 Query: 413 LTMMAPGTPSLSTDQSKVTANLFSPVVMNGRFVGRSHCSRFA-SAPTFPRPPL 258 L MA G P + T +TA LF + + F SH S P FP P L Sbjct: 202 LPFMAVGQPVMVTAAEAITAPLFISGMRDDYFWDHSHSSSLCFPMPPFPPPSL 254
>GLGC_ERWCT (Q6CZK2) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 425 Score = 28.5 bits (62), Expect = 7.9 Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 8/102 (7%) Frame = +1 Query: 55 AKMFGVGGIVSDLTGGLRGAHLKGSVVLMRKNALDFN------DFGAT--VMDGVTELLG 210 A+ + + L GG RG LKG L K A+ F DF + + G+ + Sbjct: 13 ARQLPLKSVALILAGG-RGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRI-- 69 Query: 211 RGVTCQLISSTNVDHNNGGRGKVGAEANLEQWLLPTNLPFIT 336 GV Q S T V H G + AE N LLP + T Sbjct: 70 -GVITQYQSHTLVQHIQRGWSFLNAEMNEFVDLLPAQQRYST 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,567,766 Number of Sequences: 219361 Number of extensions: 828911 Number of successful extensions: 3569 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3391 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3518 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
