Clone Name | bastl01f08 |
---|---|
Clone Library Name | barley_pub |
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete sequence Length = 155911 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 380 ggacgcggtggctcaagcccata 402 ||||||||||||||||||||||| Sbjct: 76210 ggacgcggtggctcaagcccata 76232
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tcccctcttctctctctccaaggtct 46 ||||||||||||||||||||| |||| Sbjct: 13452704 tcccctcttctctctctccaaagtct 13452679 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tcccctcttctctctctccaaggtct 46 ||||||||||||||||||||| |||| Sbjct: 13447779 tcccctcttctctctctccaaagtct 13447754 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cacctcacctcgtcctcgtc 231 |||||||||||||||||||| Sbjct: 27259015 cacctcacctcgtcctcgtc 27258996
>gb|AC137073.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0005A11, from chromosome 3, complete sequence Length = 168219 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tcccctcttctctctctccaaggtct 46 ||||||||||||||||||||| |||| Sbjct: 12595 tcccctcttctctctctccaaagtct 12570 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tcccctcttctctctctccaaggtct 46 ||||||||||||||||||||| |||| Sbjct: 7670 tcccctcttctctctctccaaagtct 7645
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 ctcgtcctcgtcctcggtggcg 241 |||||||||||||||||||||| Sbjct: 1961164 ctcgtcctcgtcctcggtggcg 1961143
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tcccctcttctctctctccaaggtct 46 ||||||||||||||||||||| |||| Sbjct: 13448579 tcccctcttctctctctccaaagtct 13448554 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 tcccctcttctctctctccaaggtct 46 ||||||||||||||||||||| |||| Sbjct: 13443654 tcccctcttctctctctccaaagtct 13443629 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cacctcacctcgtcctcgtc 231 |||||||||||||||||||| Sbjct: 27350338 cacctcacctcgtcctcgtc 27350319
>gb|AY190948.1| Drosophila pseudoobscura clone DPSF01_06_H12 (D1436) genomic sequence Length = 43025 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 323 cgatgcagcggcagcagcagca 344 |||||||||||||||||||||| Sbjct: 13012 cgatgcagcggcagcagcagca 12991
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaaggtctcg 352 ||||||||| |||||||||||||||| Sbjct: 2738193 gcagcggcaccagcagcaaggtctcg 2738218
>gb|AC149694.2| Bos taurus BAC CH240-423C21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 186118 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaagg 347 ||||||||||||||||||||| Sbjct: 135306 gcagcggcagcagcagcaagg 135326
>gb|AY394000.1| Rhodococcus sp. TK6 phosphotriesterase (pte) gene, partial cds; acyl-CoA synthetase (acs), short chain dehydrogenase (scd), transport gene (tpg), and cyclohexanol dehydrogenase (chnA) genes, complete cds Length = 5965 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 ggtggcgcctgcggatattcagtgc 259 |||||||||| |||||||||||||| Sbjct: 2984 ggtggcgccttcggatattcagtgc 3008
>ref|XM_541885.2| PREDICTED: Canis familiaris similar to bassoon (LOC484769), mRNA Length = 11766 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 cagcggcagcagcagcaaggtctcg 352 |||| |||||||||||||||||||| Sbjct: 11317 cagcagcagcagcagcaaggtctcg 11341
>ref|XM_568532.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNN00960) partial mRNA Length = 900 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 gatgcagcggcagcagcagca 344 ||||||||||||||||||||| Sbjct: 13 gatgcagcggcagcagcagca 33
>emb|AL132822.15|HSJ1017F8 Human DNA sequence from clone RP5-1017F8 on chromosome 20 Contains a novel gene, part of a novel gene (LOC284757) and a CpG island, complete sequence Length = 118873 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaagg 347 ||||||||||||||||||||| Sbjct: 9821 gcagcggcagcagcagcaagg 9801
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 gagttcgtcgaggccggcgcg 324 ||||||||||||||||||||| Sbjct: 267429 gagttcgtcgaggccggcgcg 267449
>emb|AL021839.1|SPBC19G7 S.pombe chromosome II cosmid c19G7 Length = 37727 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cagcagcagcaaggtctcgac 354 ||||||||||||||||||||| Sbjct: 36055 cagcagcagcaaggtctcgac 36035
>gb|AC113337.2| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0061H20, from chromosome 10, complete sequence Length = 135876 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaagg 347 ||||||||| ||||||||||||||| Sbjct: 66504 cgatgcagcagcagcagcagcaagg 66528
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaagg 347 ||||||||||||||||||||| Sbjct: 1286609 gcagcggcagcagcagcaagg 1286629
>gb|AC090179.4| Homo sapiens chromosome 15, clone RP11-236J21, complete sequence Length = 161586 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaagg 347 ||||||||||||||||||||| Sbjct: 53994 gcagcggcagcagcagcaagg 54014
>ref|NM_001021889.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC19G7.16), partial mRNA Length = 1287 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cagcagcagcaaggtctcgac 354 ||||||||||||||||||||| Sbjct: 1051 cagcagcagcaaggtctcgac 1031
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaagg 347 ||||||||| ||||||||||||||| Sbjct: 4640460 cgatgcagcagcagcagcagcaagg 4640484 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 7810997 gcagcggcagcagcagcaag 7810978
>gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, complete sequence Length = 195806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaagg 347 ||||||||||||||||||||| Sbjct: 35335 gcagcggcagcagcagcaagg 35315
>ref|XM_321339.2| Anopheles gambiae str. PEST ENSANGP00000012821 (ENSANGG00000010332), partial mRNA Length = 1135 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 gatgcagcggcagcagcagca 344 ||||||||||||||||||||| Sbjct: 230 gatgcagcggcagcagcagca 210
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaagg 347 ||||||||| ||||||||||||||| Sbjct: 4641281 cgatgcagcagcagcagcagcaagg 4641305 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 7816096 gcagcggcagcagcagcaag 7816077
>gb|AC122220.4| Mus musculus BAC clone RP23-122B15 from 9, complete sequence Length = 188580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 ttcccctcttctctctctcca 40 ||||||||||||||||||||| Sbjct: 83845 ttcccctcttctctctctcca 83865
>emb|AL513503.2|HS297A17 Homo sapiens chromosome 9 BAC RP11-297A17, complete sequence Length = 160758 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcaagaagtggcaccacccag 174 ||||||||||||||||||||| Sbjct: 74851 tcaagaagtggcaccacccag 74871
>emb|AL606930.13| Mouse DNA sequence from clone RP23-131D5 on chromosome 4, complete sequence Length = 133741 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 acccaggggtgggtgggtggc 189 ||||||||||||||||||||| Sbjct: 103978 acccaggggtgggtgggtggc 103998
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 217 cacctcgtcctcgtcctcggtggcgcct 244 ||||||| |||||||||||| ||||||| Sbjct: 578919 cacctcggcctcgtcctcggcggcgcct 578892
>ref|XM_474176.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaag 346 ||||||||| |||||||||||||| Sbjct: 1001 cgatgcagcagcagcagcagcaag 1024
>ref|XM_464509.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1561 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaaggtct 350 ||||| |||||||||||||||||| Sbjct: 1346 gcagcagcagcagcagcaaggtct 1369
>ref|NM_195586.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0034E23.23), mRNA Length = 450 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 227 gcagcggcagcagcagcaag 208
>gb|U43748.1|AH003505S1 Homo sapiens frataxin (FRDA) gene, promoter region and exon 1 Length = 2465 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 aggacgcggtggctcaagcccata 402 |||||||||||||||| ||||||| Sbjct: 2041 aggacgcggtggctcatgcccata 2064
>gb|AF296171.1| Homo sapiens Friedreich ataxia GAA trinucleotide repeat region Length = 392 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 aggacgcggtggctcaagcccata 402 |||||||||||||||| ||||||| Sbjct: 18 aggacgcggtggctcatgcccata 41
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccaaggtctctcacactca 56 |||||||||||||||||||| Sbjct: 36919 tccaaggtctctcacactca 36900
>ref|XM_611263.2| PREDICTED: Bos taurus similar to putative integral membrane transport UST1r (LOC508494), mRNA Length = 2566 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 gcgatgcagcggcagcagcagcaa 345 |||||||||| ||||||||||||| Sbjct: 2503 gcgatgcagcagcagcagcagcaa 2526
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cacctcacctcgtcctcgtc 231 |||||||||||||||||||| Sbjct: 45380 cacctcacctcgtcctcgtc 45399
>gb|AC134460.4| Mus musculus BAC clone RP23-373D18 from chromosome 10, complete sequence Length = 174545 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 22 cccctcttctctctctccaaggtctctc 49 ||||||||||||| |||| ||||||||| Sbjct: 122768 cccctcttctctccctcccaggtctctc 122741
>gb|BC070877.1| Rattus norvegicus SH3-domain kinase binding protein 1, mRNA (cDNA clone MGC:91419 IMAGE:7096160), complete cds Length = 3310 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 34 cgcgatgcagcagcagcagcagca 57
>gb|BC111599.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone MGC:133420 IMAGE:40080557), complete cds, with stop codon, in Gateway system Length = 3102 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 94 cgcgaggcagcggcagcagcagca 71
>gb|AC149233.1| Pan troglodytes chromosome X clone RP43-034P07 map human ortholog q28, complete sequence Length = 169963 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctcacttgaacaactgccgc 72 |||||||||||||||||||| Sbjct: 50525 ctcacttgaacaactgccgc 50506
>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gacatacaaaggctgcagca 371 |||||||||||||||||||| Sbjct: 109473 gacatacaaaggctgcagca 109454
>ref|XM_453563.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D11264g predicted mRNA Length = 2040 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 457 gcagcggcagcagcagcaag 476
>ref|NM_012465.2| Homo sapiens tolloid-like 2 (TLL2), mRNA Length = 6753 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 290 cgcgaggcagcggcagcagcagca 267
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tgcagcggcagcagcagcaa 345 |||||||||||||||||||| Sbjct: 58130 tgcagcggcagcagcagcaa 58111
>gb|AC139711.4| Mus musculus BAC clone RP23-362F21 from chromosome 19, complete sequence Length = 230596 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ttctctctctccaaggtctctcac 51 |||| ||||||||||||||||||| Sbjct: 170308 ttctgtctctccaaggtctctcac 170285
>gb|DQ483363.1| Gymnogyps californianus clone 66H microsatellite sequence Length = 723 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 716 ttcccctcttctctctctcc 697
>ref|XM_382259.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02083.1) partial mRNA Length = 1971 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 atgcagcggcagcagcagca 344 |||||||||||||||||||| Sbjct: 1747 atgcagcggcagcagcagca 1766
>gb|BC030548.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone IMAGE:5182610), containing frame-shift errors Length = 2041 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 289 cgcgaggcagcggcagcagcagca 266
>gb|AC121825.3| Mus musculus BAC clone RP23-469H5 from chromosome 3, complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 20 ttcccctcttctctctctccaaggtctc 47 ||||||||||||||| |||| ||||||| Sbjct: 126464 ttcccctcttctctccctcccaggtctc 126491
>emb|CR381607.8| Zebrafish DNA sequence from clone CH211-125I6 in linkage group 7, complete sequence Length = 94930 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cccctcttctctctctccaa 41 |||||||||||||||||||| Sbjct: 51754 cccctcttctctctctccaa 51735
>ref|XM_544559.2| PREDICTED: Canis familiaris similar to Carboxypeptidase N subunit 2 precursor (Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83 kDa chain) (Carboxypeptidase N regulatory subunit) (Carboxypeptidase N large subunit) (LOC487434), mRNA Length = 642 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cctcgtcctcgtcctcggtg 238 |||||||||||||||||||| Sbjct: 628 cctcgtcctcgtcctcggtg 609
>ref|XM_544444.2| PREDICTED: Canis familiaris similar to procollagen, type XVI, alpha 1 (LOC487318), mRNA Length = 4571 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 cctcgtcctcgtcctcggtg 238 |||||||||||||||||||| Sbjct: 2878 cctcgtcctcgtcctcggtg 2897
>emb|CR649525.2|CNS0F057 Tetraodon nigroviridis full-length cDNA Length = 1017 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 326 tgcagcggcagcagcagcaaggtc 349 ||||||||||||||||||| |||| Sbjct: 80 tgcagcggcagcagcagcagggtc 57
>gb|BC013871.2| Homo sapiens tolloid-like 2, mRNA (cDNA clone IMAGE:3836889), partial cds Length = 1980 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 265 cgcgaggcagcggcagcagcagca 242
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 tcctcgtcctcggtggcgcc 243 |||||||||||||||||||| Sbjct: 199544 tcctcgtcctcggtggcgcc 199525
>emb|AL391841.17| Human DNA sequence from clone RP11-123G14 on chromosome 13 Contains part of a novel gene (FLJ22153) and a CpG island, complete sequence Length = 99441 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 97693 ttcccctcttctctctctcc 97712
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccgctgctcggcgcgaccg 87 |||||||||||||||||||| Sbjct: 674074 gccgctgctcggcgcgaccg 674093
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 cggagttcgtcgaggccggcgcga 325 ||||| |||||||||||||||||| Sbjct: 3865925 cggagctcgtcgaggccggcgcga 3865902
>emb|AL162730.26| Human DNA sequence from clone RP11-265B8 on chromosome 9 Contains the 3' end of the PIP5K1B gene for phosphatidylinositol-4-phosphate 5-kinase, type I, beta (MSS4, STM7), the PRKACG gene for protein kinase, cAMP-dependent, catalytic, gamma (KAPG), the FRDA gene for Friedreich ataxia (FA, FARR), a novel gene and three CpG islands, complete sequence Length = 171381 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 aggacgcggtggctcaagcccata 402 |||||||||||||||| ||||||| Sbjct: 85881 aggacgcggtggctcatgcccata 85904
>emb|AL353766.8| Human DNA sequence from clone RP11-400A24 on chromosome 9, complete sequence Length = 183542 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 cagtatagtattcaagaagt 162 |||||||||||||||||||| Sbjct: 37355 cagtatagtattcaagaagt 37336
>emb|AL160395.24| Human DNA sequence from clone RP11-474D23 on chromosome 13q33.1-34 Contains a the 3' end of a novel gene (MGC35169) and 2 CpG islands, complete sequence Length = 179959 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 143427 ttcccctcttctctctctcc 143408
>emb|AL139374.18| Human DNA sequence from clone RP11-118F16 on chromosome 13 Contains a novel gene, complete sequence Length = 53536 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 53285 ttcccctcttctctctctcc 53266
>emb|AL139135.15| Human DNA sequence from clone RP11-463J7 on chromosome 1q31.1-31.3 Contains a coronin actin binding protein 1C (CORO1C) pseudogene, the 3' end of a novel gene and a glycine cleavage system protein H (aminomethyl carrier) (GCSH) pseudogene, complete sequence Length = 165919 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cgcggtggctcaagcccata 402 |||||||||||||||||||| Sbjct: 59591 cgcggtggctcaagcccata 59610
>emb|AL138765.18| Human DNA sequence from clone RP11-34E5 on chromosome 10 Contains the SMBP gene for SM-11044 binding protein (SMBP)(EP70-P-iso), the TLL2 gene for tolloid-like 2, a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1)(B23, NPM, NUMATRIN) pseudogene, a ribosomal protein S2 (RPS2)(LLREP3) pseudogene, the 3' end of the gene for a novel protein (possible ortholog of mouse phosphoinositide-3-kinase adaptor protein 1 (Pik3ap1)) and two CpG islands, complete sequence Length = 162820 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 24919 cgcgaggcagcggcagcagcagca 24942
>gb|AC112655.4| Homo sapiens X BAC RP11-286G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114148 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ctcacctcgtcctcgtcctc 234 |||||||||||||||||||| Sbjct: 104133 ctcacctcgtcctcgtcctc 104114
>gb|AY267682.1| Bigelowiella natans phosphoglycerate kinase 2 mRNA, complete cds; nuclear gene for plastid product Length = 2087 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 325 gcagcggcagcagcagcaag 344
>gb|AF472304.1|F472304S01 Mus musculus Ruk protein (Sh3kbp1) gene, exon 1 Length = 574 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 270 cgcgatgcagcagcagcagcagca 293
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 963652 gcagcggcagcagcagcaag 963633
>gb|AC161921.5| Mus musculus chromosome 1, clone RP24-402C17, complete sequence Length = 170279 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ttctctctctccaaggtctc 47 |||||||||||||||||||| Sbjct: 3035 ttctctctctccaaggtctc 3054
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 59569 ttcccctcttctctctctcc 59550
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 cagcaggcggtgaggacgcg 386 |||||||||||||||||||| Sbjct: 94383 cagcaggcggtgaggacgcg 94364
>gb|AC027317.6| Homo sapiens chromosome 5 clone CTC-340P19, complete sequence Length = 112365 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 aggacgcggtggctcaagcccata 402 |||||||||||||||| ||||||| Sbjct: 58919 aggacgcggtggctcatgcccata 58896
>tpg|BK003406.1| TPA: TPA_inf: Drosophila melanogaster HDC02273 (HDC02273) gene, complete cds Length = 372 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 246 gcagcggcagcagcagcaag 265
>gb|DQ378281.1| Drosophila virilis strain Tucson 15010-1001.10 fosmid 26E5, complete sequence Length = 40479 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 atgcagcggcagcagcagca 344 |||||||||||||||||||| Sbjct: 20230 atgcagcggcagcagcagca 20211
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 gcgatgcagcggcagcagcagcaa 345 |||||||||||||| ||||||||| Sbjct: 1922778 gcgatgcagcggcatcagcagcaa 1922755
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tcctcgtcctcggtggcgcc 243 |||||||||||||||||||| Sbjct: 870470 tcctcgtcctcggtggcgcc 870489
>dbj|AK172022.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830031B02 product:SH3-domain kinase binding protein 1, full insert sequence Length = 3395 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 157 cgcgatgcagcagcagcagcagca 180
>gb|AF411694.1|AF411694 Baboon cytomegalovirus B79 (B79), B80 (B80), B82 (B82), B83a (B83a), B83b (B83b), and B84 (B84) genes, complete cds Length = 9946 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cgatgcagcggcagcagcag 342 |||||||||||||||||||| Sbjct: 2731 cgatgcagcggcagcagcag 2712
>gb|AC156504.5| Mus musculus 10 BAC RP24-315I19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 208535 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gccattcaagactcacctca 218 |||||||||||||||||||| Sbjct: 23568 gccattcaagactcacctca 23587
>ref|NM_014728.1| Homo sapiens FERM and PDZ domain containing 4 (FRMPD4), mRNA Length = 6352 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ctcacctcgtcctcgtcctc 234 |||||||||||||||||||| Sbjct: 2770 ctcacctcgtcctcgtcctc 2751
>gb|AC022352.5|AC022352 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0034E23, from chromosome 10, complete sequence Length = 139398 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 116876 gcagcggcagcagcagcaag 116857
>dbj|AK080930.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430213G06 product:SH3-domain kinase binding protein 1, full insert sequence Length = 3537 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 41 cgcgatgcagcagcagcagcagca 64
>dbj|AK049182.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330011K06 product:SH3-domain kinase binding protein 1, full insert sequence Length = 3388 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 177 cgcgatgcagcagcagcagcagca 200
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaag 346 ||||||||| |||||||||||||| Sbjct: 33525985 cgatgcagcagcagcagcagcaag 33526008 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 24499938 ttcccctcttctctctctcc 24499919 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 atgcagcggcagcagcagca 344 |||||||||||||||||||| Sbjct: 21029223 atgcagcggcagcagcagca 21029242
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tgcagcggcagcagcagcaa 345 |||||||||||||||||||| Sbjct: 24870016 tgcagcggcagcagcagcaa 24869997
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaaggtct 350 ||||| |||||||||||||||||| Sbjct: 5609236 gcagcagcagcagcagcaaggtct 5609259
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 22868282 gcagcggcagcagcagcaag 22868263
>gb|AC010214.7|AC010214 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR27F17, complete sequence Length = 174036 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 140633 gcagcggcagcagcagcaag 140614
>gb|AC152505.2| Pan troglodytes BAC clone RP43-113N22 from chromosome 7, complete sequence Length = 219580 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 cgcggtggctcaagcccata 402 |||||||||||||||||||| Sbjct: 165599 cgcggtggctcaagcccata 165580
>gb|AF032895.1|AF032895 Camponotus consobrinus microsatellite-containing sequence Ccon79 Length = 623 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 361 ttcccctcttctctctctcc 342
>gb|AC005037.2| Homo sapiens BAC clone RP11-469M7 from 2, complete sequence Length = 190508 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cgcggtggctcaagcccata 402 |||||||||||||||||||| Sbjct: 189522 cgcggtggctcaagcccata 189541
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 71839 gcagcggcagcagcagcaag 71820
>gb|AC005533.2|AC005533 Homo sapiens PAC clone RP4-794K21 from 14q24.3, complete sequence Length = 82347 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tcccctaaattcccctcttc 30 |||||||||||||||||||| Sbjct: 74971 tcccctaaattcccctcttc 74990
>ref|XM_240449.3| PREDICTED: Rattus norvegicus G protein-coupled receptor 124 (predicted) (Gpr124_predicted), mRNA Length = 5127 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 187 gcagcggcagcagcagcaag 168
>gb|AC138405.6| Mus musculus chromosome 1, clone RP24-280N11, complete sequence Length = 151783 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ttctctctctccaaggtctc 47 |||||||||||||||||||| Sbjct: 112556 ttctctctctccaaggtctc 112537
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89473 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 ctctctctccaaggtctctc 49 |||||||||||||||||||| Sbjct: 45202 ctctctctccaaggtctctc 45183
>gb|AC022167.7| Homo sapiens chromosome 16 clone RP11-77H9, complete sequence Length = 180705 Score = 40.1 bits (20), Expect = 6.1 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 33 tctctccaaggtctctcacactcacttg 60 ||||||||||||||||| |||||||||| Sbjct: 103409 tctctccaaggtctctc-cactcacttg 103435
>gb|AC136966.2| Bos taurus clone RP42-221D7, complete sequence Length = 158113 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaaggtct 350 ||||| |||||||||||||||||| Sbjct: 103506 gcagcagcagcagcagcaaggtct 103483
>gb|BC112366.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone MGC:133313 IMAGE:40038726), complete cds Length = 5074 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 188 cgcgaggcagcggcagcagcagca 165
>gb|BC112341.1| Homo sapiens tolloid-like 2, mRNA (cDNA clone MGC:133312 IMAGE:40038720), complete cds Length = 5074 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 188 cgcgaggcagcggcagcagcagca 165
>emb|BX649340.3| Mouse DNA sequence from clone RP23-225D24 on chromosome 2, complete sequence Length = 99083 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 attcccctcttctctctctc 38 |||||||||||||||||||| Sbjct: 72720 attcccctcttctctctctc 72701
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaaggtct 350 ||||| |||||||||||||||||| Sbjct: 36972 gcagcagcagcagcagcaaggtct 36995
>gb|AC158405.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1366F05, complete sequence Length = 171022 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 115604 gcagcggcagcagcagcaag 115623
>dbj|AK026106.1| Homo sapiens cDNA: FLJ22453 fis, clone HRC09679, highly similar to AF059516 Homo sapiens tolloid-like 2 protein (TLL2) mRNA Length = 1907 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 297 cgcgaggcagcggcagcagcagca 274
>dbj|AK025184.1| Homo sapiens cDNA: FLJ21531 fis, clone COL06036 Length = 2671 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cgcggtggctcaagcccata 402 |||||||||||||||||||| Sbjct: 2377 cgcggtggctcaagcccata 2396
>emb|AL442117.1|H0421H08 Oryza sativa genomic DNA, chromosome X, BAC clone: H0421H08, complete sequence Length = 55574 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaag 346 ||||||||| |||||||||||||| Sbjct: 39515 cgatgcagcagcagcagcagcaag 39538
>dbj|AB023149.2| Homo sapiens mRNA for KIAA0932 protein, partial cds Length = 6717 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 255 cgcgaggcagcggcagcagcagca 232
>dbj|AK068104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129G14, full insert sequence Length = 1791 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaag 346 ||||||||| |||||||||||||| Sbjct: 1281 cgatgcagcagcagcagcagcaag 1304
>dbj|AK068100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130K11, full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaaggtct 350 ||||| |||||||||||||||||| Sbjct: 1345 gcagcagcagcagcagcaaggtct 1368
>gb|AC157775.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0064O05, complete sequence Length = 28847 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 18645 gcagcggcagcagcagcaag 18626
>gb|AF059516.1|AF059516 Homo sapiens tolloid-like 2 protein (TLL2) mRNA, complete cds Length = 5021 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||| |||||||||||||||||| Sbjct: 428 cgcgaggcagcggcagcagcagca 405
>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete sequence Length = 254309 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 177830 gcagcggcagcagcagcaag 177849
>gb|AC119902.12| Mus musculus chromosome 8, clone RP24-235G23, complete sequence Length = 146712 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tccaaggtctctcacactca 56 |||||||||||||||||||| Sbjct: 130456 tccaaggtctctcacactca 130437
>dbj|AB002314.3| Homo sapiens mRNA for KIAA0316 protein, partial cds Length = 6352 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 ctcacctcgtcctcgtcctc 234 |||||||||||||||||||| Sbjct: 2770 ctcacctcgtcctcgtcctc 2751
>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence Length = 231380 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 gacatacaaaggctgcagca 371 |||||||||||||||||||| Sbjct: 204609 gacatacaaaggctgcagca 204628
>gb|AC153533.4| Mus musculus 10 BAC RP23-474K10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187069 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 22 cccctcttctctctctccaaggtctctc 49 ||||||||||||| |||| ||||||||| Sbjct: 120094 cccctcttctctccctcccaggtctctc 120121
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tgcagcggcagcagcagcaa 345 |||||||||||||||||||| Sbjct: 25181686 tgcagcggcagcagcagcaa 25181667
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 93260 ttcccctcttctctctctcc 93241
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 cgatgcagcggcagcagcagcaag 346 ||||||||| |||||||||||||| Sbjct: 102274 cgatgcagcagcagcagcagcaag 102297
>gb|AC002368.1|AC002368 Homo sapiens Xq28 BAC PAC and cosmid clones containing FMR2 gene exons 1,2, and 3, complete sequence Length = 324816 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ctcacttgaacaactgccgc 72 |||||||||||||||||||| Sbjct: 9423 ctcacttgaacaactgccgc 9404
>ref|NM_053360.2| Rattus norvegicus SH3-domain kinase binding protein 1 (Sh3kbp1), mRNA Length = 3310 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 34 cgcgatgcagcagcagcagcagca 57
>gb|AC171241.2| Mus musculus BAC clone RP23-94E5 from chromosome 14, complete sequence Length = 244795 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ttcccctcttctctctctcc 39 |||||||||||||||||||| Sbjct: 224221 ttcccctcttctctctctcc 224240
>gb|AC153541.4| Mus musculus 10 BAC RP23-80P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222655 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gccattcaagactcacctca 218 |||||||||||||||||||| Sbjct: 207943 gccattcaagactcacctca 207962
>emb|AL845304.4| Mouse DNA sequence from clone RP23-184H6 on chromosome X, complete sequence Length = 160065 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 34429 gcagcggcagcagcagcaag 34448
>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete sequence Length = 227918 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 321 cgcgatgcagcggcagcagcagca 344 ||||||||||| |||||||||||| Sbjct: 224344 cgcgatgcagcagcagcagcagca 224367
>emb|AL929257.9| Mouse DNA sequence from clone RP23-75A23 on chromosome 2, complete sequence Length = 180619 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gcagcggcagcagcagcaag 346 |||||||||||||||||||| Sbjct: 132552 gcagcggcagcagcagcaag 132533
>emb|AL831773.2| Mouse DNA sequence from clone RP23-296B1 on chromosome 4, complete sequence Length = 154298 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 gaacagtatagtattcaaga 159 |||||||||||||||||||| Sbjct: 152001 gaacagtatagtattcaaga 152020
>emb|AL672204.7| Mouse DNA sequence from clone RP23-325N6 on chromosome X, complete sequence Length = 129254 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cttctctctctccaaggtct 46 |||||||||||||||||||| Sbjct: 94518 cttctctctctccaaggtct 94537 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,754,703 Number of Sequences: 3902068 Number of extensions: 4754703 Number of successful extensions: 242433 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 240174 Number of HSP's gapped (non-prelim): 2260 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)