>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 104     tcaggcggatcggccgccaga 124
               |||||||||||||||||||||
Sbjct: 3005951 tcaggcggatcggccgccaga 3005931

>emb|CR381708.8| Zebrafish DNA sequence from clone DKEYP-10H11 in linkage group 1,
             complete sequence
          Length = 161310

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   tatattcttgagcacactaat 296
             |||||||||||||||||||||
Sbjct: 77993 tatattcttgagcacactaat 78013

>emb|AL714030.6| Zebrafish DNA sequence from clone BUSM1-223C6 in linkage group 11
             Contains part of a novel gene similar to CACNA1D
             (voltage-dependent calcium channel L type, alpha 1D
             subunit) and a CpG island, complete sequence
          Length = 90347

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 310   tacatttatctaagtttattt 330
             |||||||||||||||||||||
Sbjct: 64472 tacatttatctaagtttattt 64452

>emb|BX571969.5| Zebrafish DNA sequence from clone DKEY-93P1 in linkage group 11, complete
              sequence
          Length = 160905

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 310    tacatttatctaagtttattt 330
              |||||||||||||||||||||
Sbjct: 141642 tacatttatctaagtttattt 141622

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 96      gtccgccgtcaggcggatcgg 116
               |||||||||||||||||||||
Sbjct: 6859133 gtccgccgtcaggcggatcgg 6859153



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 97      tccgccgtcaggcggatcgg 116
               ||||||||||||||||||||
Sbjct: 6859247 tccgccgtcaggcggatcgg 6859266

>emb|BX005261.8| Zebrafish DNA sequence from clone DKEY-20I6 in linkage group 1, complete
              sequence
          Length = 228767

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 276    tatattcttgagcacactaat 296
              |||||||||||||||||||||
Sbjct: 189851 tatattcttgagcacactaat 189831

>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold
          Length = 1743090

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    tatctaagtttatttccagc 335
              ||||||||||||||||||||
Sbjct: 365813 tatctaagtttatttccagc 365832

>gb|AC161509.8| Mus musculus chromosome 7, clone RP23-53O17, complete sequence
          Length = 196638

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  tattacatttatctaagttt 326
            ||||||||||||||||||||
Sbjct: 6729 tattacatttatctaagttt 6748

>gb|AC084730.2| Papio anubis clone RP41-479B1, complete sequence
          Length = 166929

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   tatctaagtttatttccagc 335
             ||||||||||||||||||||
Sbjct: 74425 tatctaagtttatttccagc 74444

>gb|AC124607.4| Mus musculus BAC clone RP23-84H10 from chromosome 12, complete sequence
          Length = 168842

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   atttatctaagtttatttcc 332
             ||||||||||||||||||||
Sbjct: 16762 atttatctaagtttatttcc 16781

>gb|AC124349.4| Mus musculus BAC clone RP24-463G19 from chromosome 12, complete sequence
          Length = 122944

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    atttatctaagtttatttcc 332
              ||||||||||||||||||||
Sbjct: 107417 atttatctaagtttatttcc 107436

>gb|AC121967.3| Mus musculus BAC clone RP24-268P11 from chromosome 19, complete sequence
          Length = 185775

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ttctacctggagaagcatga 206
              ||||||||||||||||||||
Sbjct: 148843 ttctacctggagaagcatga 148862

>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    ttacatttatctaagtttat 328
              ||||||||||||||||||||
Sbjct: 717125 ttacatttatctaagtttat 717144

>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 377   ccatgtgccgcagaagaatt 396
             ||||||||||||||||||||
Sbjct: 18731 ccatgtgccgcagaagaatt 18750

>emb|BX293996.16| Zebrafish DNA sequence from clone DKEY-38J20 in linkage group 1,
             complete sequence
          Length = 237723

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   acatttatctaagtttattt 330
             ||||||||||||||||||||
Sbjct: 44966 acatttatctaagtttattt 44947

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 377      ccatgtgccgcagaagaatt 396
                ||||||||||||||||||||
Sbjct: 23576050 ccatgtgccgcagaagaatt 23576069

>gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete sequence
          Length = 240447

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   tatctaagtttatttccagc 335
             ||||||||||||||||||||
Sbjct: 42536 tatctaagtttatttccagc 42555

>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    tatctaagtttatttccagc 335
              ||||||||||||||||||||
Sbjct: 312801 tatctaagtttatttccagc 312820

>gb|AC102117.13| Mus musculus chromosome 7, clone RP23-154P9, complete sequence
          Length = 196717

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    tattacatttatctaagttt 326
              ||||||||||||||||||||
Sbjct: 107626 tattacatttatctaagttt 107645

>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21,
              complete sequence
          Length = 139298

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 377    ccatgtgccgcagaagaatt 396
              ||||||||||||||||||||
Sbjct: 131953 ccatgtgccgcagaagaatt 131972

>gb|AC139112.4| Cercopithecus aethiops clone CH252-467C20, complete sequence
          Length = 172237

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 316   tatctaagtttatttccagc 335
             ||||||||||||||||||||
Sbjct: 98962 tatctaagtttatttccagc 98981


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,896,068
Number of Sequences: 3902068
Number of extensions: 2896068
Number of successful extensions: 51948
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51861
Number of HSP's gapped (non-prelim): 87
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)