ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator... 30 3.8
2CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator... 29 5.0

>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1|
           (Cell cycle and apoptosis regulatory protein 1) (CARP-1)
          Length = 1146

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 6   ERERREGEKYWERSSTGRRAELSLPSHAQLSDPKAQE 116
           ER++ +GE+  E    G   E++ P+H    DPKA +
Sbjct: 601 ERKKADGEQDEEEKDDGEVKEIATPTHWSKLDPKAMK 637



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>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1|
           (Cell cycle and apoptosis regulatory protein 1) (CARP-1)
           (Death inducer with SAP domain)
          Length = 1150

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 6   ERERREGEKYWERSSTGRRAELSLPSHAQLSDPKAQE 116
           ER+  +GE+  E    G   E+S P+H    DPK  +
Sbjct: 604 ERKEADGEQDEEEKDDGEAKEISTPTHWSKLDPKTMK 640


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,348,822
Number of Sequences: 219361
Number of extensions: 325794
Number of successful extensions: 1142
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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