ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475957.1| Oryza sativa (japonica cultivar-group), predic... 309 4e-81
2dbj|AK100131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 159 8e-36
4gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome... 159 8e-36
5gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 58 2e-05
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.084
7emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in... 44 0.33
8ref|XM_481713.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
9ref|XM_470340.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.3
11gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 42 1.3
12gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, comp... 42 1.3
13dbj|AK135309.1| Mus musculus 12 days embryo male wolffian duct i... 42 1.3
14gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.3
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
17dbj|AP005866.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
18dbj|AK061174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
19gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.3
20dbj|AP000438.5| Homo sapiens genomic DNA, chromosome 11q clone:C... 42 1.3
21gb|BC065011.1| Homo sapiens phosphorylase, glycogen; liver (Hers... 40 5.2
22gb|AY827551.1| Ovis aries liver glycogen phosphorylase (PYGL) mR... 40 5.2
23ref|XM_525293.1| PREDICTED: Pan troglodytes similar to brain gly... 40 5.2
24ref|XM_466851.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
25ref|XM_464681.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
26gb|BC082229.1| Homo sapiens phosphorylase, glycogen; liver (Hers... 40 5.2
27ref|XM_873755.1| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
28ref|XM_873662.1| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
29ref|XM_873568.1| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
30ref|XM_873466.1| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
31ref|XM_873362.1| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
32ref|XM_873265.1| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
33ref|XM_581761.2| PREDICTED: Bos taurus similar to liver glycogen... 40 5.2
34gb|BC030795.2| Homo sapiens phosphorylase, glycogen; brain, mRNA... 40 5.2
35gb|BC017045.2| Homo sapiens phosphorylase, glycogen; brain, mRNA... 40 5.2
36gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.2
37ref|NM_002862.3| Homo sapiens phosphorylase, glycogen; brain (PY... 40 5.2
38ref|XM_385306.1| Gibberella zeae PH-1 chromosome 3 conserved hyp... 40 5.2
39ref|XM_446078.1| Candida glabrata CBS138, CAGL0F02497g partial mRNA 40 5.2
40gb|DQ459480.1| Magnetospirillum gryphiswaldense strain MSR-1 Tat... 40 5.2
41gb|DQ459479.1| Magnetospirillum magnetotacticum MS-1 TatA (tatA)... 40 5.2
42gb|BC009895.2| Homo sapiens phosphorylase, glycogen; liver (Hers... 40 5.2
43gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 5.2
44emb|AL121772.19|HSJ965G21 Human DNA sequence from clone RP5-965G... 40 5.2
45emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp... 40 5.2
46emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 5.2
47emb|AL834489.1|HSM805597 Homo sapiens mRNA; cDNA DKFZp434F1431 (... 40 5.2
48ref|NM_002863.3| Homo sapiens phosphorylase, glycogen; liver (He... 40 5.2
49emb|CR600182.1| full-length cDNA clone CS0DC011YN07 of Neuroblas... 40 5.2
50emb|CR593967.1| full-length cDNA clone CS0DE007YN07 of Placenta ... 40 5.2
51gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, com... 40 5.2
52gb|AC013531.10| Homo sapiens, clone RP11-114M16, complete sequence 40 5.2
53ref|NM_001024861.1| Ovis aries liver glycogen phosphorylase (PYG... 40 5.2
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
55gb|BC095850.1| Homo sapiens cDNA clone IMAGE:30343100, partial cds 40 5.2
56dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.2
57gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Ca... 40 5.2
58dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.2
59dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.2
60dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
61dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
62dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
63dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
64emb|AJ270043.1|TNI270043 Tetraodon nigroviridis partial 28S rRNA... 40 5.2
65dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
66emb|AL358334.3|CNS05TE5 Human chromosome 14 DNA sequence BAC R-2... 40 5.2
67gb|AF066858.1|AF066858 Homo sapiens liver glycogen phosphorylase... 40 5.2
68gb|BC110791.1| Homo sapiens phosphorylase, glycogen; liver (Hers... 40 5.2
69gb|U47025.1|HSU47025 Human fetal brain glycogen phosphorylase B ... 40 5.2
70dbj|AB209080.1| Homo sapiens mRNA for brain glycogen phosphoryla... 40 5.2
71gb|J03544.1|HUMMGPHB Human brain glycogen phosphorylase mRNA, co... 40 5.2
72emb|Y15233.1|HSY15233 Homo sapiens mRNA for liver glycogen phosp... 40 5.2 
>ref|XM_475957.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3411

 Score =  309 bits (156), Expect = 4e-81
 Identities = 225/248 (90%)
 Strand = Plus / Plus

                                                                       
Query: 92  ggcgcacacggtgcgcgacctggcggaggaggggaagaagcgggccgtgctgctcctcgt 151
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 27  ggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgt 86

                                                                       
Query: 152 cttcgccttcgggctcgccttcctcatgtccctgacaagctcttcagttaggattaactt 211
           |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 87  cttcgccttcggcctcgccttcctcatgtccctgacaagctcctcagtttggattaactt 146

                                                                       
Query: 212 cccattcgccatatctttgatagttctgtttcgctacctatcacttgactacgacttccg 271
            ||||| |||| | ||||||| ||| | ||||||||| ||||||||||||| || |||||
Sbjct: 147 gccatttgccacagctttgattgttttatttcgctacatatcacttgactatgatttccg 206

                                                                       
Query: 272 tagaaagagcacaactgccacagaccatggtaccagtcgcccacttgccaaaacaaaaag 331
           |||||||||||||||| |||||||  | | | |||||||| ||||| |||||||||||||
Sbjct: 207 tagaaagagcacaactaccacagataacgatgccagtcgcgcacttaccaaaacaaaaag 266

                   
Query: 332 tattgaac 339
           ||||||||
Sbjct: 267 tattgaac 274
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>dbj|AK100131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010A16, full
           insert sequence
          Length = 4022

 Score =  309 bits (156), Expect = 4e-81
 Identities = 225/248 (90%)
 Strand = Plus / Plus

                                                                       
Query: 92  ggcgcacacggtgcgcgacctggcggaggaggggaagaagcgggccgtgctgctcctcgt 151
           |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgt 259

                                                                       
Query: 152 cttcgccttcgggctcgccttcctcatgtccctgacaagctcttcagttaggattaactt 211
           |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 260 cttcgccttcggcctcgccttcctcatgtccctgacaagctcctcagtttggattaactt 319

                                                                       
Query: 212 cccattcgccatatctttgatagttctgtttcgctacctatcacttgactacgacttccg 271
            ||||| |||| | ||||||| ||| | ||||||||| ||||||||||||| || |||||
Sbjct: 320 gccatttgccacagctttgattgttttatttcgctacatatcacttgactatgatttccg 379

                                                                       
Query: 272 tagaaagagcacaactgccacagaccatggtaccagtcgcccacttgccaaaacaaaaag 331
           |||||||||||||||| |||||||  | | | |||||||| ||||| |||||||||||||
Sbjct: 380 tagaaagagcacaactaccacagataacgatgccagtcgcgcacttaccaaaacaaaaag 439

                   
Query: 332 tattgaac 339
           ||||||||
Sbjct: 440 tattgaac 447
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  159 bits (80), Expect = 8e-36
 Identities = 89/92 (96%)
 Strand = Plus / Plus

                                                                            
Query: 92       ggcgcacacggtgcgcgacctggcggaggaggggaagaagcgggccgtgctgctcctcgt 151
                |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 28818422 ggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgt 28818481

                                                
Query: 152      cttcgccttcgggctcgccttcctcatgtccc 183
                |||||||||||| |||||||||||||||||||
Sbjct: 28818482 cttcgccttcggcctcgccttcctcatgtccc 28818513



 Score =  151 bits (76), Expect = 2e-33
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                            
Query: 184      tgacaagctcttcagttaggattaacttcccattcgccatatctttgatagttctgtttc 243
                |||||||||| |||||| |||||||||| ||||| |||| | ||||||| ||| | ||||
Sbjct: 28819292 tgacaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttc 28819351

                                                                            
Query: 244      gctacctatcacttgactacgacttccgtagaaagagcacaactgccacagaccatggta 303
                ||||| ||||||||||||| || ||||||||||||||||||||| |||||||  | | | 
Sbjct: 28819352 gctacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatg 28819411

                                                    
Query: 304      ccagtcgcccacttgccaaaacaaaaagtattgaac 339
                |||||||| ||||| |||||||||||||||||||||
Sbjct: 28819412 ccagtcgcgcacttaccaaaacaaaaagtattgaac 28819447
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>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035N21, complete sequence
          Length = 128331

 Score =  159 bits (80), Expect = 8e-36
 Identities = 89/92 (96%)
 Strand = Plus / Minus

                                                                         
Query: 92    ggcgcacacggtgcgcgacctggcggaggaggggaagaagcgggccgtgctgctcctcgt 151
             |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 55045 ggcgcacacggtccgcgacctcgcggaggaggggaagaagcgggccgtgctgctcctcgt 54986

                                             
Query: 152   cttcgccttcgggctcgccttcctcatgtccc 183
             |||||||||||| |||||||||||||||||||
Sbjct: 54985 cttcgccttcggcctcgccttcctcatgtccc 54954



 Score =  151 bits (76), Expect = 2e-33
 Identities = 136/156 (87%)
 Strand = Plus / Minus

                                                                         
Query: 184   tgacaagctcttcagttaggattaacttcccattcgccatatctttgatagttctgtttc 243
             |||||||||| |||||| |||||||||| ||||| |||| | ||||||| ||| | ||||
Sbjct: 54175 tgacaagctcctcagtttggattaacttgccatttgccacagctttgattgttttatttc 54116

                                                                         
Query: 244   gctacctatcacttgactacgacttccgtagaaagagcacaactgccacagaccatggta 303
             ||||| ||||||||||||| || ||||||||||||||||||||| |||||||  | | | 
Sbjct: 54115 gctacatatcacttgactatgatttccgtagaaagagcacaactaccacagataacgatg 54056

                                                 
Query: 304   ccagtcgcccacttgccaaaacaaaaagtattgaac 339
             |||||||| ||||| |||||||||||||||||||||
Sbjct: 54055 ccagtcgcgcacttaccaaaacaaaaagtattgaac 54020
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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                               
Query: 34     ctcgtccccacccgccggcgcgcgggaggatggcgacgccgggcggcgc 82
              |||||||  ||||||||  ||||||||||||||||||| ||||||||||
Sbjct: 154477 ctcgtccaaacccgccgctgcgcgggaggatggcgacgtcgggcggcgc 154429
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 67      cgacgccgggcggcgcgccgagg 89
               |||||||||||||||||||||||
Sbjct: 2454027 cgacgccgggcggcgcgccgagg 2454005
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>emb|BX248331.8| Zebrafish DNA sequence from clone CH211-236D3 in linkage group 11,
             complete sequence
          Length = 174071

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 318   gccaaaacaaaaagtattgaac 339
             ||||||||||||||||||||||
Sbjct: 57369 gccaaaacaaaaagtattgaac 57390
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>ref|XM_481713.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 402

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 104 gcgcgacctggcggaggaggg 124
           |||||||||||||||||||||
Sbjct: 274 gcgcgacctggcggaggaggg 254
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>ref|XM_470340.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1000

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 142 tgctcctcgtcttcgccttcg 162
           |||||||||||||||||||||
Sbjct: 280 tgctcctcgtcttcgccttcg 300
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 142      tgctcctcgtcttcgccttcg 162
                |||||||||||||||||||||
Sbjct: 34836588 tgctcctcgtcttcgccttcg 34836608
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
             sequence
          Length = 164352

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   tgctcctcgtcttcgccttcg 162
             |||||||||||||||||||||
Sbjct: 26062 tgctcctcgtcttcgccttcg 26042
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>gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, complete sequence
          Length = 154115

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    gatggcgacgccgggcggcgc 82
             |||||||||||||||||||||
Sbjct: 42913 gatggcgacgccgggcggcgc 42933
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>dbj|AK135309.1| Mus musculus 12 days embryo male wolffian duct includes
          surrounding region cDNA, RIKEN full-length enriched
          library, clone:6720469M02 product:Putative splicing
          factor YT521 (RA301-binding protein) homolog [Rattus
          norvegicus], full insert sequence
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 62 gatggcgacgccgggcggcgc 82
          |||||||||||||||||||||
Sbjct: 54 gatggcgacgccgggcggcgc 34
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     gggcggcgcgccgagggcggc 94
              |||||||||||||||||||||
Sbjct: 588252 gggcggcgcgccgagggcggc 588272
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 104      gcgcgacctggcggaggaggg 124
                |||||||||||||||||||||
Sbjct: 14923992 gcgcgacctggcggaggaggg 14924012



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   caagctcttcagttaggatt 206
             ||||||||||||||||||||
Sbjct: 76072 caagctcttcagttaggatt 76091
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 142      tgctcctcgtcttcgccttcg 162
                |||||||||||||||||||||
Sbjct: 34926660 tgctcctcgtcttcgccttcg 34926680
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>dbj|AP005866.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0076O03
          Length = 140823

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   gcgcgacctggcggaggaggg 124
             |||||||||||||||||||||
Sbjct: 56521 gcgcgacctggcggaggaggg 56541
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>dbj|AK061174.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C03, full
           insert sequence
          Length = 982

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 142 tgctcctcgtcttcgccttcg 162
           |||||||||||||||||||||
Sbjct: 259 tgctcctcgtcttcgccttcg 279
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     ccggcgcgcgggaggatggcg 68
              |||||||||||||||||||||
Sbjct: 599170 ccggcgcgcgggaggatggcg 599150
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>dbj|AP000438.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-43M24, complete
             sequence
          Length = 148710

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 162   gggctcgccttcctcatgtcc 182
             |||||||||||||||||||||
Sbjct: 88515 gggctcgccttcctcatgtcc 88495
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>gb|BC065011.1| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen
           storage disease type VI), mRNA (cDNA clone
           IMAGE:6166871), partial cds
          Length = 1454

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 235 ggcgcacacggtgcgcgacc 254
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>gb|AY827551.1| Ovis aries liver glycogen phosphorylase (PYGL) mRNA, complete cds
          Length = 3176

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 211 ggcgcacacggtgcgcgacc 230
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>ref|XM_525293.1| PREDICTED: Pan troglodytes similar to brain glycogen phosphorylase
           (LOC469908), mRNA
          Length = 4278

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 168 ggcgcacacggtgcgcgacc 187
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>ref|XM_466851.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 651

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 139 tgctgctcctcgtcttcgcc 158
           ||||||||||||||||||||
Sbjct: 88  tgctgctcctcgtcttcgcc 107
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>ref|XM_464681.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 gctcctcgtcttcgccttcg 162
           ||||||||||||||||||||
Sbjct: 261 gctcctcgtcttcgccttcg 280
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>gb|BC082229.1| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen
           storage disease type VI), mRNA (cDNA clone
           IMAGE:4053354), partial cds
          Length = 2806

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 239 ggcgcacacggtgcgcgacc 258
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>ref|XM_873755.1| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 9 (LOC505472), mRNA
          Length = 4110

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 189 ggcgcacacggtgcgcgacc 208
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>ref|XM_873662.1| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 8 (LOC505472), mRNA
          Length = 4038

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 168 ggcgcacacggtgcgcgacc 187
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>ref|XM_873568.1| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 7 (LOC505472), mRNA
          Length = 4020

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 189 ggcgcacacggtgcgcgacc 208
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>ref|XM_873466.1| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 6 (LOC505472), mRNA
          Length = 4158

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 189 ggcgcacacggtgcgcgacc 208
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>ref|XM_873362.1| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 5 (LOC505472), mRNA
          Length = 4134

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 189 ggcgcacacggtgcgcgacc 208
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>ref|XM_873265.1| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 4 (LOC505472), mRNA
          Length = 3432

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 189 ggcgcacacggtgcgcgacc 208
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>ref|XM_581761.2| PREDICTED: Bos taurus similar to liver glycogen phosphorylase,
           transcript variant 1 (LOC505472), mRNA
          Length = 3217

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 189 ggcgcacacggtgcgcgacc 208
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>gb|BC030795.2| Homo sapiens phosphorylase, glycogen; brain, mRNA (cDNA clone
           MGC:16933 IMAGE:3916938), complete cds
          Length = 4103

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 253 ggcgcacacggtgcgcgacc 272
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>gb|BC017045.2| Homo sapiens phosphorylase, glycogen; brain, mRNA (cDNA clone
           MGC:9213 IMAGE:3877951), complete cds
          Length = 4154

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 252 ggcgcacacggtgcgcgacc 271
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      gggcggcgcgccgagggcggcgca 97
               ||||||||||||||| ||||||||
Sbjct: 3339872 gggcggcgcgccgagcgcggcgca 3339849
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>ref|NM_002862.3| Homo sapiens phosphorylase, glycogen; brain (PYGB), mRNA
          Length = 4131

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 277 ggcgcacacggtgcgcgacc 296
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>ref|XM_385306.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein
           (FG05130.1) partial mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 366 agtggaagtactggttggag 385
           ||||||||||||||||||||
Sbjct: 871 agtggaagtactggttggag 852
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>ref|XM_446078.1| Candida glabrata CBS138, CAGL0F02497g partial mRNA
          Length = 2502

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 atctttgatagttctgtttc 243
           ||||||||||||||||||||
Sbjct: 803 atctttgatagttctgtttc 784
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>gb|DQ459480.1| Magnetospirillum gryphiswaldense strain MSR-1 TatA (tatA) gene,
            partial cds; and TatB (tatB) and TatC (tatC) genes,
            complete cds
          Length = 1377

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  tcttcgccttcgggctcgccttcc 174
            ||||||||||||| ||||||||||
Sbjct: 1073 tcttcgccttcggcctcgccttcc 1096
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>gb|DQ459479.1| Magnetospirillum magnetotacticum MS-1 TatA (tatA) gene, partial cds;
            and TatB (tatB) and TatC (tatC) genes, complete cds
          Length = 1408

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 151  tcttcgccttcgggctcgccttcc 174
            |||||||||||||||| |||||||
Sbjct: 1107 tcttcgccttcgggctggccttcc 1130
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>gb|BC009895.2| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen
           storage disease type VI), mRNA (cDNA clone
           IMAGE:2967205), partial cds
          Length = 2831

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 238 ggcgcacacggtgcgcgacc 257
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 76      gcggcgcgccgagggcggcg 95
               ||||||||||||||||||||
Sbjct: 1785860 gcggcgcgccgagggcggcg 1785879
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>emb|AL121772.19|HSJ965G21 Human DNA sequence from clone RP5-965G21 on chromosome 20 Contains the
             PYGB gene encoding the brain form of glycogen
             phosphorylase, the 3' end of the C20orf22 gene for
             chromosome 20 open reading frame 22 and a CpG island,
             complete sequence
          Length = 75499

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    ggcgcacacggtgcgcgacc 111
             ||||||||||||||||||||
Sbjct: 17724 ggcgcacacggtgcgcgacc 17743
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>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    atctttgatagttctgtttc 243
              ||||||||||||||||||||
Sbjct: 241603 atctttgatagttctgtttc 241584
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    tcttcgccttcgggctcgcc 170
              ||||||||||||||||||||
Sbjct: 134718 tcttcgccttcgggctcgcc 134737
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>emb|AL834489.1|HSM805597 Homo sapiens mRNA; cDNA DKFZp434F1431 (from clone DKFZp434F1431)
          Length = 3747

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 72 ccgggcggcgcgccgagggcggcg 95
          ||||||||||||||||| ||||||
Sbjct: 63 ccgggcggcgcgccgagcgcggcg 86
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>ref|NM_002863.3| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen
           storage disease type VI) (PYGL), mRNA
          Length = 2830

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 281 ggcgcacacggtgcgcgacc 300
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>emb|CR600182.1| full-length cDNA clone CS0DC011YN07 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 2649

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 155 ggcgcacacggtgcgcgacc 174
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>emb|CR593967.1| full-length cDNA clone CS0DE007YN07 of Placenta of Homo sapiens
           (human)
          Length = 2761

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 239 ggcgcacacggtgcgcgacc 258
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>gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, complete sequence
          Length = 189047

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    gccttcctcatgtccctgac 187
              ||||||||||||||||||||
Sbjct: 127391 gccttcctcatgtccctgac 127410
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>gb|AC013531.10| Homo sapiens, clone RP11-114M16, complete sequence
          Length = 38598

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   gccttcctcatgtccctgac 187
             ||||||||||||||||||||
Sbjct: 19125 gccttcctcatgtccctgac 19106
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>ref|NM_001024861.1| Ovis aries liver glycogen phosphorylase (PYGL), mRNA
          Length = 3176

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 211 ggcgcacacggtgcgcgacc 230
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 139      tgctgctcctcgtcttcgcc 158
                ||||||||||||||||||||
Sbjct: 25063649 tgctgctcctcgtcttcgcc 25063630



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     gctcctcgtcttcgccttcg 162
               ||||||||||||||||||||
Sbjct: 6676556 gctcctcgtcttcgccttcg 6676575



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 108     gacctggcggaggaggggaagaagcggg 135
               ||||||| ||||||||||| ||||||||
Sbjct: 3186909 gacctggaggaggaggggacgaagcggg 3186936
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>gb|BC095850.1| Homo sapiens cDNA clone IMAGE:30343100, partial cds
          Length = 2828

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 255 ggcgcacacggtgcgcgacc 274
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 70      cgccgggcggcgcgccgagggcggcgca 97
               |||||| | |||||||||||||||||||
Sbjct: 3856658 cgccggcccgcgcgccgagggcggcgca 3856631
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>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188928

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 72     ccgggcggcgcgccgagggcggcg 95
              ||||||||||||||||| ||||||
Sbjct: 181647 ccgggcggcgcgccgagcgcggcg 181624
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 79     gcgcgccgagggcggcgcacacggtgcg 106
              ||||| |||||||||||| |||||||||
Sbjct: 886183 gcgcgtcgagggcggcgcgcacggtgcg 886156
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      ggcgacgccgggcggcgcgc 84
               ||||||||||||||||||||
Sbjct: 7095351 ggcgacgccgggcggcgcgc 7095370
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>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0419H03
          Length = 129020

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 108    gacctggcggaggaggggaagaagcggg 135
              ||||||| ||||||||||| ||||||||
Sbjct: 115063 gacctggaggaggaggggacgaagcggg 115090
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>dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1103G11
          Length = 182931

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 108   gacctggcggaggaggggaagaagcggg 135
             ||||||| ||||||||||| ||||||||
Sbjct: 59096 gacctggaggaggaggggacgaagcggg 59123
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>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0042D01
          Length = 148305

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   tgctgctcctcgtcttcgcc 158
             ||||||||||||||||||||
Sbjct: 76637 tgctgctcctcgtcttcgcc 76618
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>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0027A02
          Length = 140402

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    gctcctcgtcttcgccttcg 162
              ||||||||||||||||||||
Sbjct: 110931 gctcctcgtcttcgccttcg 110950
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>emb|AJ270043.1|TNI270043 Tetraodon nigroviridis partial 28S rRNA gene, clone C1CE008ZG07
          Length = 683

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  cgggcggcgcgccgagggcg 92
           ||||||||||||||||||||
Sbjct: 614 cgggcggcgcgccgagggcg 595
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>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1147B12
          Length = 127902

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   caagctcttcagttaggatt 206
             ||||||||||||||||||||
Sbjct: 76072 caagctcttcagttaggatt 76091
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>emb|AL358334.3|CNS05TE5 Human chromosome 14 DNA sequence BAC R-218E20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174793

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    ggcgcacacggtgcgcgacc 111
             ||||||||||||||||||||
Sbjct: 85645 ggcgcacacggtgcgcgacc 85664
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>gb|AF066858.1|AF066858 Homo sapiens liver glycogen phosphorylase (PYGL) mRNA, complete cds
          Length = 2544

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 168 ggcgcacacggtgcgcgacc 187
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>gb|BC110791.1| Homo sapiens phosphorylase, glycogen; liver (Hers disease, glycogen
           storage disease type VI), mRNA (cDNA clone
           IMAGE:6051020), partial cds
          Length = 2915

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 237 ggcgcacacggtgcgcgacc 256
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>gb|U47025.1|HSU47025 Human fetal brain glycogen phosphorylase B mRNA, complete cds
          Length = 4066

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 202 ggcgcacacggtgcgcgacc 221
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>dbj|AB209080.1| Homo sapiens mRNA for brain glycogen phosphorylase variant protein
          Length = 4093

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 235 ggcgcacacggtgcgcgacc 254
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>gb|J03544.1|HUMMGPHB Human brain glycogen phosphorylase mRNA, complete cds
          Length = 3816

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 247 ggcgcacacggtgcgcgacc 266
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>emb|Y15233.1|HSY15233 Homo sapiens mRNA for liver glycogen phosphorylase
          Length = 2643

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  ggcgcacacggtgcgcgacc 111
           ||||||||||||||||||||
Sbjct: 219 ggcgcacacggtgcgcgacc 238


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,272,144
Number of Sequences: 3902068
Number of extensions: 3272144
Number of successful extensions: 67336
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65837
Number of HSP's gapped (non-prelim): 1495
length of query: 389
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 367
effective length of database: 17,147,199,772
effective search space: 6293022316324
effective search space used: 6293022316324
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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