ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl01e07 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 229 bits (583), Expect = 3e-60 Identities = 115/115 (100%), Positives = 115/115 (100%) Frame = +3 Query: 108 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 287 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST Sbjct: 1 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 60 Query: 288 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 452 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN Sbjct: 61 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVVN 115
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 196 bits (498), Expect = 2e-50 Identities = 94/114 (82%), Positives = 109/114 (95%), Gaps = 1/114 (0%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 290 +LGG+IDT+TG++K +RLKGTVVLMRKNVLDLNDFGAT+IDG+GEFLGKGVTCQLISSTA Sbjct: 1 MLGGIIDTITGSSKQSRLKGTVVLMRKNVLDLNDFGATVIDGLGEFLGKGVTCQLISSTA 60 Query: 291 VDQDNGGRGKVGAEAELEQWVT-SLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 VD +NG RGKVGAEA LEQW+T SLPSLTTGES+FG+TFDW+V+KLGVPGAI+V Sbjct: 61 VDPNNGNRGKVGAEASLEQWLTSSLPSLTTGESRFGVTFDWDVDKLGVPGAIIV 114
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 181 bits (459), Expect = 8e-46 Identities = 85/113 (75%), Positives = 103/113 (91%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 290 +LGG+I LTG NK+ARLKG++VLMRKN LD+NDFGAT+IDGI EFLG+GVTCQL+SS+ Sbjct: 1 MLGGIIGGLTG-NKNARLKGSLVLMRKNALDINDFGATVIDGISEFLGRGVTCQLVSSSL 59 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 VD +NG RG+VG EA LEQW+TSLPSLTTGESKFG+TF+WEVEK+G+PGAI+V Sbjct: 60 VDPNNGNRGRVGTEASLEQWLTSLPSLTTGESKFGVTFEWEVEKMGIPGAIIV 112
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 123 bits (309), Expect = 2e-28 Identities = 59/113 (52%), Positives = 83/113 (73%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 290 +LGGL D LTG N + ++KG VLM + +LD DF A+++D + E G +TCQL+S+T Sbjct: 1 MLGGLKDKLTGKNGN-KIKGLAVLMSRKLLDPRDFTASLLDNVHEVFGNSITCQLVSATV 59 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 DQ+N GRG VG+EA LEQ +T LPS++ GESK + F+WE++K GVPGAI++ Sbjct: 60 ADQNNEGRGIVGSEANLEQGLTDLPSVSQGESKLTVRFNWEMDKHGVPGAIII 112
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 116 bits (290), Expect = 3e-26 Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 3/116 (2%) Frame = +3 Query: 111 LLGGLIDTLTGANKSA---RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLIS 281 + G L D LTG ++KGTVVLM+KNVLD NDF A+ +D + EFLG +T +L+S Sbjct: 1 MFGELRDLLTGGGNETTTKKVKGTVVLMKKNVLDFNDFNASFLDRLHEFLGNKITLRLVS 60 Query: 282 STAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 S D +NG +GK+G A LE W+T++ SLT GES F +TFD+E + G PGA ++ Sbjct: 61 SDVTDSENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETD-FGYPGAFLI 115
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 108 bits (270), Expect = 6e-24 Identities = 52/114 (45%), Positives = 79/114 (69%) Frame = +3 Query: 108 MLLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISST 287 M LGG++D + G + ++KG V+LM+KNVLD + GA+++DGI + LG+ V+ QLIS Sbjct: 1 MSLGGIVDAILGKDDRPKVKGRVILMKKNVLDFINIGASVVDGISDLLGQKVSIQLISG- 59 Query: 288 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 +V+ D G GK+ A LE W+T + +T GES F +TFDW+ ++ GVPGA ++ Sbjct: 60 SVNYD-GLEGKLSNPAYLESWLTDITPITAGESTFSVTFDWDRDEFGVPGAFII 112
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 106 bits (265), Expect = 2e-23 Identities = 57/120 (47%), Positives = 80/120 (66%), Gaps = 6/120 (5%) Frame = +3 Query: 108 MLLGGLIDTLTGANKSA----RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLG--KGVTC 269 M + G D LTG NK A R++GT VL++K+VL L DF A+++DG+ LG +GV Sbjct: 1 MQVQGFFDRLTGRNKEAWKEGRIRGTAVLVKKDVLGLGDFHASLLDGVHNILGHKEGVAF 60 Query: 270 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 +L+S+TA D NGGRGK+G A LE+ V ++ S GES F + F+W+ E G+PGA+VV Sbjct: 61 RLVSATARDPSNGGRGKLGKPAHLEELVVTMKSTAAGESVFRVAFEWD-ESQGIPGAVVV 119
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 95.5 bits (236), Expect = 6e-20 Identities = 54/113 (47%), Positives = 72/113 (63%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTA 290 L+GGLI G + S ++KGTVV+M+KN LD D ++ D I E LG+ V+ QLISS Sbjct: 5 LVGGLIG---GHHDSKKVKGTVVMMKKNALDFTDLAGSLTDKIFEALGQKVSFQLISSVQ 61 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 D NG +GK A LE ++ +L L GE+ FG+TFDW E+ GVPGA V+ Sbjct: 62 SDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWN-EEFGVPGAFVI 113
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 86.7 bits (213), Expect = 3e-17 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 18/119 (15%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLN--------------DFGATII----DGIGEFLGKGVTCQ 272 NK +++GTVVLMRKNVLD N D G II DG+ FLG+ V+ Q Sbjct: 10 NKGHKIRGTVVLMRKNVLDFNTIVSIGGGNVHGVIDSGINIIGSTLDGLTAFLGRSVSLQ 69 Query: 273 LISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 LIS+T D + G+GKVG + LE + SLP+L GES F + F+W+ E +G+PGA + Sbjct: 70 LISATKSDAN--GKGKVGKDTFLEGVLASLPTLGAGESAFNIHFEWDHE-MGIPGAFYI 125
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 84.0 bits (206), Expect = 2e-16 Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 1/104 (0%) Frame = +3 Query: 141 GANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGK 320 G + S ++KGTVV+M KNVLD D ++ I + LG+ V+ QLISS D NG +GK Sbjct: 12 GHDDSKKVKGTVVMMNKNVLDFTDLAGSLTGKIFDVLGQKVSFQLISSVQGDPTNGLQGK 71 Query: 321 VGAEAELEQWVTSLPSLTTG-ESKFGLTFDWEVEKLGVPGAIVV 449 A LE + +L LT G E+ FG+TFDW E+ GVPGA ++ Sbjct: 72 HSNPAYLENSLFTLTPLTAGSETAFGVTFDWN-EEFGVPGAFII 114
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 82.4 bits (202), Expect = 5e-16 Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 13/114 (11%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFLGKGVTCQLISST 287 N+ ++KGTVVLMRKNVLD+N D + +D + FLG+ V+ QLIS+T Sbjct: 10 NRGHKIKGTVVLMRKNVLDINSLTTVGGVIGQGFDILGSTVDNLTAFLGRSVSLQLISAT 69 Query: 288 AVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 D G+GK+G LE ++SLP+L G+S F + F+W+ + +G+PGA + Sbjct: 70 KPDAT--GKGKLGKATFLEGIISSLPTLGAGQSAFKIHFEWD-DDMGIPGAFYI 120
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 82.0 bits (201), Expect = 6e-16 Identities = 45/97 (46%), Positives = 64/97 (65%) Frame = +3 Query: 159 RLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAE 338 ++KGTVVLM KN L++N G+ + D + FLG+ V+ QLIS+T D G+GKVG + Sbjct: 7 KIKGTVVLMPKNELEVNPDGSAV-DNLNAFLGRSVSLQLISATKADAH--GKGKVGKDTF 63 Query: 339 LEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 LE TSLP+L GES F + F+W+ +G+PGA + Sbjct: 64 LEGINTSLPTLGAGESAFNIHFEWD-GSMGIPGAFYI 99
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 78.2 bits (191), Expect = 9e-15 Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 18/115 (15%) Frame = +3 Query: 159 RLKGTVVLMRKNVLDLNDFG------------------ATIIDGIGEFLGKGVTCQLISS 284 ++KGTVVLMRKNVLD N + +D + FLG+ V QLIS+ Sbjct: 18 KIKGTVVLMRKNVLDFNSVADLTKGNVGGLIGTGLNVVGSTLDNLTAFLGRSVALQLISA 77 Query: 285 TAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 T + G+GKVG + LE + SLP+L GES F + F+W+ E +G+PGA + Sbjct: 78 TKPLAN--GKGKVGKDTFLEGIIVSLPTLGAGESAFNIQFEWD-ESMGIPGAFYI 129
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 76.6 bits (187), Expect = 3e-14 Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 13/126 (10%) Frame = +3 Query: 111 LLGGLIDTLTGANKSARLKGTVVLMRKNVLDLN-------------DFGATIIDGIGEFL 251 +LGGL+ ++ ++KGTVVLMRKNVL +N D + +D + FL Sbjct: 1 MLGGLL------HRGHKIKGTVVLMRKNVLHVNSVTSVGGIIGQGLDLVGSTLDTLTAFL 54 Query: 252 GKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGV 431 G+ V+ QLIS+T D + G+GK+G LE +TSLP+L G+S F + F+W+ + G+ Sbjct: 55 GRPVSLQLISATKADAN--GKGKLGKATFLEGIITSLPTLGAGQSAFKINFEWD-DGSGI 111 Query: 432 PGAIVV 449 GA + Sbjct: 112 LGAFYI 117
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 73.9 bits (180), Expect = 2e-13 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 20/120 (16%) Frame = +3 Query: 150 KSARLKGTVVLMRKNVLDLNDFGA--------------------TIIDGIGEFLGKGVTC 269 + +LKGTV+LM+KNVLD+N A +IID FLG+ V Sbjct: 8 RGQKLKGTVILMQKNVLDINALTAAQSPSGIIGGAFGVVGSIAGSIIDTATAFLGRSVRL 67 Query: 270 QLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 +LIS+T D G+GKV EA LE +TS+P+L +S F + F+W+ +G PGA + Sbjct: 68 RLISATVADAS--GKGKVSKEAFLEGLLTSIPTLGDKQSAFSVHFEWD-SNMGTPGAFYI 124
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 71.2 bits (173), Expect = 1e-12 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 22/123 (17%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLNDF------------------GATIIDGIGE----FLGKG 260 +K ++KGTVVLM KNVLD N G +++ G+ + FLG+ Sbjct: 6 DKGQKIKGTVVLMPKNVLDFNAITSIGKGGVIDTATGILGQGVSLVGGVIDTATSFLGRN 65 Query: 261 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGA 440 ++ QLIS+T D G GKVG E LE+ + +LP+L + F + F+W+ G+PGA Sbjct: 66 ISMQLISATQTD--GSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDA-SFGIPGA 122 Query: 441 IVV 449 + Sbjct: 123 FYI 125
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 68.2 bits (165), Expect = 1e-11 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 22/123 (17%) Frame = +3 Query: 147 NKSARLKGTVVLMRKNVLDLNDFGAT----------------------IIDGIGEFLGKG 260 N+ ++KGTVVLM KNV D N+F +T I+DG + Sbjct: 6 NRGHKIKGTVVLMTKNVFDFNEFVSTTRGGIVGAAGGLFGAATDIVGGIVDGATAIFSRN 65 Query: 261 VTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGA 440 + QLIS+T D G GKVG + LE+ + SLP+L + F + F+W+ E G+P A Sbjct: 66 IAIQLISATKT--DGLGNGKVGKQTFLEKHLPSLPNLGDRQDAFNVYFEWD-ENFGIPEA 122 Query: 441 IVV 449 + Sbjct: 123 FYI 125
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 68.2 bits (165), Expect = 1e-11 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 13/113 (11%) Frame = +3 Query: 150 KSARLKGTVVLMRKNVLDLNDF---GATIIDGIGEFLGKGV----------TCQLISSTA 290 K ++KGT+V+M+KNVLD+N G + G+G F+G V + QLIS+T Sbjct: 7 KGQKIKGTMVVMQKNVLDINSITSVGGIVDQGLG-FIGSAVDALTFAATKISIQLISATK 65 Query: 291 VDQDNGGRGKVGAEAELEQWVTSLPSLTTGESKFGLTFDWEVEKLGVPGAIVV 449 D GG+GK+G L +T LP+L GE + + F+W+ + G+PGA + Sbjct: 66 AD---GGKGKIGKSTNLRGKIT-LPTLGAGEQAYDVNFEWDSD-FGIPGAFYI 113
>NCOA6_HUMAN (Q14686) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2063 Score = 34.3 bits (77), Expect = 0.15 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 3/99 (3%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPR 248 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQ 1704 Query: 247 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 131 N S V P +L SS + T PL + PV++ Sbjct: 1705 NIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQL 1743
>SDK2_HUMAN (Q58EX2) Protein sidekick-2 precursor| Length = 2170 Score = 32.7 bits (73), Expect = 0.45 Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 239 S + + R LDS V+ +V C +S + PRP ++W +++ LPR +P Sbjct: 397 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTP 452 Query: 238 MP--SMMVAP 215 + S++++P Sbjct: 453 LESGSLLISP 462
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 32.7 bits (73), Expect = 0.45 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = -1 Query: 454 VLTTMAPGTPSFSTS-QSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 V+ +P TP +TS Q+K+RPNL P T S SA PL+ +++ Sbjct: 1142 VIAHTSPWTPVVTTSTQTKIRPNLPIP-------STVLRKSGSATVSKPAPLNTFLSIKS 1194 Query: 277 ISWQVTPLPRNSPMPSMMVAPKSLRSSTF 191 PLP S ++ P + S F Sbjct: 1195 SGTSTKPLPVVKESSSDLLLPPDIISKAF 1223
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 32.0 bits (71), Expect = 0.76 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = -1 Query: 439 APGTPSFSTSQSK-VRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQV 263 A + S TSQ+K + P+ P +S + + A APT P PP T + + + Sbjct: 83 AASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAPAPTRPPPPAPTPTPAPVAATET 142 Query: 262 TPLPRNSPMPS 230 P P+P+ Sbjct: 143 VTTPIPEPVPA 153
>SYS_NEIMA (Q9JT77) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 431 Score = 31.6 bits (70), Expect = 0.99 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 2/104 (1%) Frame = +3 Query: 129 DTLTGANKSARLKGTVVLMRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNG 308 D L KS ++K + +N + GA + G G+ V ++ D + Sbjct: 31 DALEERRKSVQVKTEELQASRNSIS-KQIGA--LKGQGKHEEAQVAMDQVAQIKTDLEQA 87 Query: 309 GRGKVGAEAELEQWVTSLPSLTTGESKFGL--TFDWEVEKLGVP 434 + EL+ W+ S+P+L + FG T + EV K+G P Sbjct: 88 AADLDAVQKELDAWLLSIPNLPHEDVPFGKDETENVEVRKVGTP 131
>COBM_PSEDE (P21922) Precorrin-4 C(11)-methyltransferase (EC 2.1.1.133)| (Precorrin-3 methylase) Length = 253 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 445 TMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSAS 329 TM PG PSF+ + S + L P V+ ++T S AS Sbjct: 105 TMTPGVPSFAAAASALGRELTIPAVAQSLVLTRVSGRAS 143
>OAR_MYXXA (P38370) Protein oar precursor| Length = 1061 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 132 TLTGANKSARLKGTVVLMRKNVLDLNDFGATI 227 TL G K R +GTV+ + + +L DFGAT+ Sbjct: 261 TLEGTRKQIREEGTVITGQNQLQNLGDFGATL 292
>WEB1_YEAST (P38968) Protein WEB1 (Protein transport protein SEC31)| Length = 1273 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%) Frame = -1 Query: 427 PSFSTSQSKVRPN-LDSPVVSDGRLVTHCSSSASAPTFPRPPLSWS-TAVELISWQVTPL 254 PS + + S PN L +P +G + +A T P PPLS + ++V ++S PL Sbjct: 933 PSRAKAVSVAPPNILSTPTPLNG------IPANAASTMPPPPLSRAPSSVSMVS--PPPL 984 Query: 253 PRNSPMPSMMVAPKSLRSS 197 +NS +PS++ +S R+S Sbjct: 985 HKNSRVPSLVATSESPRAS 1003
>STE7_SCHPO (Q10136) Protein ste7| Length = 569 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%) Frame = -1 Query: 454 VLTTMAPGTPSFSTSQSKVRPNLDSPVV--------SDGRLVTHCSSSASAPTFPRPPLS 299 + T+ A T FSTS S ++ +PV+ + SSS+ AP PR S Sbjct: 197 ITTSSATHTSQFSTSSSSSVNSVHTPVMVPNPYFQYNSSMTAPSSSSSSVAPFVPRRQFS 256 Query: 298 WSTAVELISWQVTPLPRNSPMPSMMVA 218 S+A + ++ P P PS A Sbjct: 257 VSSASDPPQTPISMSPPIPPTPSQFSA 283
>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer| protein 3) (Cancer-amplified transcriptional coactivator ASC-2) (Activating signal cointegrator 2) (ASC-2) (Peroxisome proliferator-activated receptor-interacting protein) (P Length = 2067 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 3/99 (3%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT---PLPR 248 S +QS RP +PV + + + T P PL+ ++ + S V +P+ Sbjct: 1648 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPATPLTTNSGLMPPSVAVVGPLHIPQ 1707 Query: 247 NSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPVRV 131 N S V P SS + T PL + PV++ Sbjct: 1708 NIKFSSAPVTPNVPSSSPAPNIQTGRPLVLSSRATPVQL 1746
>AMPR_PSEAE (P24734) HTH-type transcriptional activator ampR| Length = 296 Score = 30.8 bits (68), Expect = 1.7 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -3 Query: 443 DGARHPELLHLPVEGEAELG--LPRRQRRQARHPLLQLRLRAH 321 +G + ++L + G +G LPR + QARHP + LRL H Sbjct: 88 EGGHYRDVLTVGAVGTFTVGWLLPRLEDFQARHPFIDLRLSTH 130
>ZN318_HUMAN (Q5VUA4) Zinc finger protein 318 (Endocrine regulatory protein)| Length = 2099 Score = 30.4 bits (67), Expect = 2.2 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 1/89 (1%) Frame = -1 Query: 454 VLTTMAPGTPSFSTS-QSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 V+ +P P +TS Q+K+RPNL P L CS++ S P PL+ +++ Sbjct: 1149 VVAHTSPWMPVVTTSTQTKIRPNLPIPSTV---LRKSCSATMSKPA----PLNTFLSIKS 1201 Query: 277 ISWQVTPLPRNSPMPSMMVAPKSLRSSTF 191 PLP + ++ P + S F Sbjct: 1202 SGTTAKPLPVVKESSADLLLPPDIISKAF 1230
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -1 Query: 403 KVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLS 299 +++P + +PVV+ ++ SSS+SAP P PP S Sbjct: 552 EIKPYVVNPVVATAAAASNSSSSSSAPLPPPPPPS 586
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 2.9 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 18/118 (15%) Frame = -1 Query: 454 VLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELI 275 + T + PS + + + P L S + + +SS+S T P+ STA + Sbjct: 4628 ITATGSTTNPSSTPGTTPIPPVLTSMATTPAATSSKATSSSSPRTATTLPVLTSTATKST 4687 Query: 274 SWQVTPLPRN-------------SPMPSMMV-----APKSLRSSTFLRMSTTVPLSRA 155 + TP+P + +PM +M P++ +ST L +TT ++RA Sbjct: 4688 ATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVL--TTTATMTRA 4743 Score = 30.0 bits (66), Expect = 2.9 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%) Frame = -1 Query: 448 TTMAPG---TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 TT+A G TPS ST S P+L + + + + S++ T P PP+ L Sbjct: 4598 TTVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNPSSTPGTTPIPPV-------L 4650 Query: 277 ISWQVTPLPRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAPV 137 S TP +S S +P++ ++T +++T S A F P+ Sbjct: 4651 TSMATTPAATSSKATSSS-SPRT--ATTLPVLTSTATKSTATSFTPI 4694 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/69 (27%), Positives = 33/69 (47%) Frame = -1 Query: 448 TTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISW 269 +T + TPS + + L SP + + +SS+S T P+ STA + + Sbjct: 4204 STGSTATPSSTPGTAPPPKVLTSPATTPTATSSKATSSSSPRTATTLPVLTSTATKSTAT 4263 Query: 268 QVTPLPRNS 242 VTP+P ++ Sbjct: 4264 SVTPIPSST 4272
>PGBM_MOUSE (Q05793) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 3707 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -1 Query: 445 TMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVT-HCSSSASAPTFPRPPLSWSTAVELISW 269 T+APGTP +S++ + G T HCS++ + P P + WS + W Sbjct: 2527 TVAPGTPQVQVEESEL-------TLEAGHTATLHCSATGNPP----PTIHWSKLRAPLPW 2575 Query: 268 Q 266 Q Sbjct: 2576 Q 2576
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 30.0 bits (66), Expect = 2.9 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%) Frame = -1 Query: 448 TTMAPGT-PSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAP--TFPRPPLSWSTAVEL 278 TT+ P T PS T+ + P +P +T +S+ + P T P PP + +T Sbjct: 1515 TTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTT---- 1570 Query: 277 ISWQVTPLPRNSPMPSMMVAPKSLRSSTFLRMSTTVP 167 TP P +P P P +T TT P Sbjct: 1571 -----TPPPTTTPSPPTTTTPSPPTITTTTPPPTTTP 1602
>NCOA3_RAT (Q9EPU2) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)| (Amplified in breast cancer-1 protein homolog) (AIB-1) (Fragment) Length = 1082 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/87 (24%), Positives = 38/87 (43%) Frame = -1 Query: 457 VVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 ++++ G+P ++ Q + SP+ S G +H SS+S +S L Sbjct: 180 IMISPRNRGSPKMASHQFSPAAGVHSPMGSSGNTGSHSFSSSSLSAL--QAISEGVGTSL 237 Query: 277 ISWQVTPLPRNSPMPSMMVAPKSLRSS 197 +S +P P+ P+M + S SS Sbjct: 238 LSTLSSPGPKLDNSPNMNINQPSKASS 264
>ELF1_MOUSE (Q60775) ETS-related transcription factor Elf-1 (E74-like factor 1)| Length = 612 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = -1 Query: 457 VVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTF--PRPPLSWSTAV 284 V+L + PG+PS S ++V+ L S V S + S ASAP+F P +++S + Sbjct: 480 VMLQSQKPGSPSIVLSPTQVQQVLTSNVQS---ICNGAGSVASAPSFSATTPVVTFSRSS 536 Query: 283 ELIS 272 +L++ Sbjct: 537 QLVA 540
>SYA_PORGI (Q7MV54) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 29.6 bits (65), Expect = 3.8 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 17/94 (18%) Frame = +3 Query: 162 LKGTVVLMRKNVLDLNDFGATIIDGIGEF-------LGKGVTCQLISSTAVDQDNGG--- 311 L+ + L+ K + D G+T++DG+ F +T ++S + D G Sbjct: 375 LETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDT 434 Query: 312 -------RGKVGAEAELEQWVTSLPSLTTGESKF 392 R + A E WV L GESKF Sbjct: 435 EMQKQKERARNAAAVEAGDWVV----LREGESKF 464
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Frame = -1 Query: 406 SKVRPNL-----DSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNS 242 + + PN+ DS V+ ++ +C +S + PRP ++W +++ LPR + Sbjct: 403 TSIAPNITRGPQDSTVIDGMSVILNCETSGA----PRPAITWQKGERILASGSVQLPRFT 458 Query: 241 PMP--SMMVAPKSL 206 + S++V+P L Sbjct: 459 LLESGSLLVSPAHL 472
>GP1BA_HUMAN (P07359) Platelet glycoprotein Ib alpha chain precursor| (Glycoprotein Ibalpha) (GP-Ib alpha) (GPIbA) (GPIb-alpha) (Antigen CD42b-alpha) (CD42b antigen) [Contains: Glycocalicin] Length = 626 Score = 29.3 bits (64), Expect = 4.9 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 239 ST++ P PV +T + S PT P P + A + + TP+P + Sbjct: 378 STTEPTPSPTTSEPVPEPAPNMTTLEPTPS-PTTPEP--TSEPAPSPTTPEPTPIPTIAT 434 Query: 238 MPSMMVAPKSLRSSTFLRMSTTVPLS 161 P+++V+ SL + ++TT P+S Sbjct: 435 SPTILVSATSLITPKSTFLTTTKPVS 460
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 14/88 (15%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP---- 251 STS +P LD+ +DG S ASA P+P + + + S TP P Sbjct: 842 STSNETTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPAFSF 901 Query: 250 ----------RNSPMPSMMVAPKSLRSS 197 N+P + AP S +S Sbjct: 902 GNNSGVKASSNNNPSTNSSTAPFSFGTS 929
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 28.9 bits (63), Expect = 6.4 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = -1 Query: 427 PSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVE--LISWQVTPL 254 PS STS + L + ++ T + + P+ S S + +++W ++ L Sbjct: 1891 PSLSTSLRAITSTLADVKHTFEKMTTSVTPGTTLPSILSGATSGSVISKSPILTWLLSSL 1950 Query: 253 PRNSPMPSMMVAPKSLRSST 194 P SP ++ AP + SST Sbjct: 1951 PSGSPPATVSNAPHVMTSST 1970
>HEM6_SOYBN (P35055) Coproporphyrinogen III oxidase, chloroplast precursor (EC| 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) Length = 385 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = -1 Query: 349 HCSSSASAPTFPRPPLSWS-----TAVELI--SWQVTPLPRNSPMPSMM----VAPKSLR 203 HC+S SAP++ P S S TA+ L SW+ P P+ + + P++ R Sbjct: 3 HCASIVSAPSYAFPFRSGSASTTPTAISLTKRSWKPPPSMAKGPVRATVSIEKETPEANR 62 Query: 202 SSTFLR 185 TFLR Sbjct: 63 PETFLR 68
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 71 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 196 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 315 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 356 Score = 28.9 bits (63), Expect = 6.4 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +2 Query: 71 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAHAQER 196 G + R GQ+Q + + GG Q+RP+ G H Q R Sbjct: 292 GGYQQRPSGQQQGGHQQGRQGQEGGYQQRPSGQQQGGHQQGR 333
>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor| Length = 2176 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -1 Query: 418 STSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLPRNSP 239 S + + R LDS V+ +V C +S + PRP ++W +++ LPR + Sbjct: 403 SIAPNITRGPLDSTVIDGMSVVLACETSGA----PRPAITWQKGERILASGSVQLPRFTL 458 Query: 238 MP--SMMVAP 215 + S++++P Sbjct: 459 LESGSLLISP 468
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 28.5 bits (62), Expect = 8.4 Identities = 26/90 (28%), Positives = 36/90 (40%) Frame = -1 Query: 430 TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 251 TPS ST++S P S S VT ++ +S+ P P S++ S P P Sbjct: 670 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP----SSSTTESSSAPVPTP 725 Query: 250 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 161 +S S + SST S V S Sbjct: 726 SSSTTESSSAPVPTPSSSTTESSSAPVTSS 755 Score = 28.5 bits (62), Expect = 8.4 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 1/98 (1%) Frame = -1 Query: 430 TPSFSTSQSKVRPNLDSPVVSDGRLV-THCSSSASAPTFPRPPLSWSTAVELISWQVTPL 254 TPS ST++S P S S V T SS+ + + P P S ST + TP Sbjct: 613 TPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVPTPSSSTTESSSAPVPTPS 672 Query: 253 PRNSPMPSMMVAPKSLRSSTFLRMSTTVPLSRALLFAP 140 + S V + SS+ S+T S A + P Sbjct: 673 SSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTP 710 Score = 28.5 bits (62), Expect = 8.4 Identities = 21/90 (23%), Positives = 38/90 (42%) Frame = -1 Query: 430 TPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVTPLP 251 TPS ST++S P S S VT ++ +S+ P P S + + T Sbjct: 358 TPSSSTTESSSAPVTSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTES 417 Query: 250 RNSPMPSMMVAPKSLRSSTFLRMSTTVPLS 161 ++P+ S S ++ S++ P++ Sbjct: 418 SSAPVTSSTTESSSAPVTSSTTESSSAPVT 447
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 28.5 bits (62), Expect = 8.4 Identities = 25/84 (29%), Positives = 35/84 (41%) Frame = -1 Query: 439 APGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVELISWQVT 260 AP T++ V+PN PV + T TF RPP++ ST + V Sbjct: 404 APPEDEPITAKEAVKPN--QPV----EVQTPLPKQELPETFQRPPIASSTPMPRAEPSVI 457 Query: 259 PLPRNSPMPSMMVAPKSLRSSTFL 188 P RN P+ L++S FL Sbjct: 458 PAARNEPI--------GLKASDFL 473
>TARSH_HUMAN (Q7Z7G0) Target of Nesh-SH3 precursor (Tarsh) (Nesh-binding| protein) (NeshBP) (ABI gene family member 3-binding protein) Length = 1075 Score = 28.5 bits (62), Expect = 8.4 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Frame = -1 Query: 448 TTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSA--SAPTFPRPPLSWSTAVELI 275 TT APG F + + K+ SP V+ + + A T PRP + + V + Sbjct: 505 TTPAPGKTQFISLKPKIPL---SPEVTHTKPAPKQTPRAPPKPKTSPRPRIPQTQPVPKV 561 Query: 274 SWQVTPLPRNSPMPSMMV---APKSL 206 +VT P+ SP P + APK + Sbjct: 562 PQRVTAKPKTSPSPEVSYTTPAPKDV 587
>CFLAR_MOUSE (O35732) CASP8 and FADD-like apoptosis regulator precursor| (Cellular FLICE-like inhibitory protein) (c-FLIP) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (MACH-related inducer of toxicity) (MRIT Length = 484 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/63 (26%), Positives = 31/63 (49%) Frame = +3 Query: 183 MRKNVLDLNDFGATIIDGIGEFLGKGVTCQLISSTAVDQDNGGRGKVGAEAELEQWVTSL 362 +R+N ++D+ +++ IGE L + L+ T + +D GRGK+ + V L Sbjct: 88 LRRNPHLVSDYRVLLME-IGESLDQNDVSSLVFLTRITRDYTGRGKIAKDKSFLDLVIEL 146 Query: 363 PSL 371 L Sbjct: 147 EKL 149
>SCRT2_HUMAN (Q9NQ03) Transcriptional repressor scratch 2 (Scratch homolog 2| zinc finger protein) Length = 307 Score = 28.5 bits (62), Expect = 8.4 Identities = 15/38 (39%), Positives = 16/38 (42%) Frame = +2 Query: 71 GAVKARRGGQEQDAAGRADRHPHGGEQERPAQGHGGAH 184 G + RRGG DA G D GG R GG H Sbjct: 116 GRSRRRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153
>NCOA3_HUMAN (Q9Y6Q9) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)| (Thyroid hormone receptor activator molecule 1) (TRAM-1) (ACTR) (Receptor-associated coactivator 3) (RAC-3) (Amplified in breast cancer-1 protein) (AIB-1) (Steroid receptor coacti Length = 1424 Score = 28.5 bits (62), Expect = 8.4 Identities = 19/83 (22%), Positives = 35/83 (42%) Frame = -1 Query: 457 VVLTTMAPGTPSFSTSQSKVRPNLDSPVVSDGRLVTHCSSSASAPTFPRPPLSWSTAVEL 278 ++++ G+P ++ Q + SP+ S G H SS+S +S L Sbjct: 480 IMISPRNRGSPKIASHQFSPVAGVHSPMASSGNTGNHSFSSSSLSAL--QAISEGVGTSL 537 Query: 277 ISWQVTPLPRNSPMPSMMVAPKS 209 +S +P P+ P+M + S Sbjct: 538 LSTLSSPGPKLDNSPNMNITQPS 560 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,339,063 Number of Sequences: 219361 Number of extensions: 957343 Number of successful extensions: 4154 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3825 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4100 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
