>emb|Z98047.1|HS162H14 Human DNA sequence from clone RP1-162H14 on chromosome 22, complete
             sequence
          Length = 47542

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 228   tcgggttttctttgctcttttcttc 252
             |||||||||||||||||||||||||
Sbjct: 33900 tcgggttttctttgctcttttcttc 33924

>gb|AC010733.8| Homo sapiens BAC clone RP11-373L24 from 2, complete sequence
          Length = 209060

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 239    ttgctcttttcttcttggtgga 260
              ||||||||||||||||||||||
Sbjct: 102519 ttgctcttttcttcttggtgga 102498

>gb|AC154125.7| Mus musculus chromosome 18, clone RP23-121M18, complete sequence
          Length = 207258

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   aggtagagatggagatgcctg 364
             |||||||||||||||||||||
Sbjct: 15488 aggtagagatggagatgcctg 15468

>gb|AC120410.11| Mus musculus chromosome 18, clone RP24-441C8, complete sequence
          Length = 178807

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 344    aggtagagatggagatgcctg 364
              |||||||||||||||||||||
Sbjct: 178408 aggtagagatggagatgcctg 178388

>gb|AY722917.2| Borrelia garinii PBi variable plasmid segment G1a19d06.s1, WORKING
            DRAFT SEQUENCE
          Length = 24477

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 387  cactgattctgatagttcaagaag 410
            ||||||||||||| ||||||||||
Sbjct: 9212 cactgattctgatggttcaagaag 9235

>gb|AC132914.7| Mus musculus chromosome 1, clone RP24-318M2, complete sequence
          Length = 157264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    ctgagaggtagagatggaga 358
              ||||||||||||||||||||
Sbjct: 107855 ctgagaggtagagatggaga 107836

>gb|AC130529.2| Mus musculus BAC clone RP23-124O11 from chromosome 16, complete sequence
          Length = 231967

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    ccagaaaactctcatctgtg 186
              ||||||||||||||||||||
Sbjct: 156596 ccagaaaactctcatctgtg 156615

>gb|AC107770.10| Mus musculus chromosome 5, clone RP23-114M24, complete sequence
          Length = 191762

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    actctcatctgtgttcaata 193
              ||||||||||||||||||||
Sbjct: 126879 actctcatctgtgttcaata 126860

>gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete sequence
          Length = 135684

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   ttttctttgctcttttcttc 252
             ||||||||||||||||||||
Sbjct: 28447 ttttctttgctcttttcttc 28466

>emb|Z84482.1|HS453D15 Human DNA sequence from clone RP3-453D15 on chromosome 6q16 Contains
             part of a novel gene, complete sequence
          Length = 85590

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ttctttgctcttttcttctt 254
             ||||||||||||||||||||
Sbjct: 49064 ttctttgctcttttcttctt 49083

>emb|AL391728.19| Human DNA sequence from clone RP11-423A18 on chromosome 1 Contains part
              of gene KIAA1365 and the PIN1L gene for protein
              (peptidyl-prolyl cis/trans isomerase) NIMA-interacting
              1-like, complete sequence
          Length = 153750

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    ttctttgctcttttcttctt 254
              ||||||||||||||||||||
Sbjct: 149004 ttctttgctcttttcttctt 149023

>emb|AL356270.11| Human DNA sequence from clone RP5-873O15 on chromosome 1 Contains part
             of a novel gene and the CLCA3 gene for chloride channel
             calcium activated family member 3, complete sequence
          Length = 103640

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   ttctttgctcttttcttctt 254
             ||||||||||||||||||||
Sbjct: 81937 ttctttgctcttttcttctt 81918

>gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence
          Length = 221526

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   acagaaggagaaaattgccc 339
             ||||||||||||||||||||
Sbjct: 51663 acagaaggagaaaattgccc 51682

>emb|AL121761.5|HSJ122P22 Human DNA sequence from clone RP1-122P22 on chromosome 20 Contains the
             3' end the SLC24A3 gene for solute carrier family 24
             (sodium/potassium/calcium exchanger) member 3, a novel
             gene and a CpG island, complete sequence
          Length = 118990

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ttttctttgctcttttcttc 252
             ||||||||||||||||||||
Sbjct: 92455 ttttctttgctcttttcttc 92436

>emb|BX908742.7| Zebrafish DNA sequence from clone DKEY-246G23 in linkage group 18,
              complete sequence
          Length = 232903

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 341    gagaggtagagatggagatg 360
              ||||||||||||||||||||
Sbjct: 179612 gagaggtagagatggagatg 179593

>gb|AC092803.2| Homo sapiens chromosome 1 clone RP11-61J19, complete sequence
          Length = 188345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 330   aaaattgccctgagaggtagagat 353
             ||||||||||||| ||||||||||
Sbjct: 56894 aaaattgccctgataggtagagat 56917

>emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in linkage group 2,
             complete sequence
          Length = 168359

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   tttctttgctcttttcttct 253
             ||||||||||||||||||||
Sbjct: 79435 tttctttgctcttttcttct 79416

>gb|AC092687.3| Homo sapiens BAC clone RP11-791G15 from 2, complete sequence
          Length = 189174

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 239   ttgctcttttcttcttggtggaat 262
             |||||||||||||||| |||||||
Sbjct: 57074 ttgctcttttcttcttagtggaat 57097

>gb|AC010888.12| Homo sapiens BAC clone RP11-418N16 from 2, complete sequence
          Length = 191863

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    ttctttgctcttttcttctt 254
              ||||||||||||||||||||
Sbjct: 181790 ttctttgctcttttcttctt 181809

>gb|AC110994.8| Homo sapiens 3 BAC RP11-144C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 65203

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   ttctttgctcttttcttctt 254
             ||||||||||||||||||||
Sbjct: 34932 ttctttgctcttttcttctt 34951

>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete
              sequence
          Length = 200375

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    acagaaggagaaaattgccc 339
              ||||||||||||||||||||
Sbjct: 109125 acagaaggagaaaattgccc 109144

>emb|AL935063.7| Zebrafish DNA sequence from clone CH211-165P5, complete sequence
          Length = 141819

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    tttctttgctcttttcttct 253
              ||||||||||||||||||||
Sbjct: 110750 tttctttgctcttttcttct 110731

>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
              sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    tcttttcttcttggtggaat 262
              ||||||||||||||||||||
Sbjct: 163116 tcttttcttcttggtggaat 163135

>emb|AL663056.11| Mouse DNA sequence from clone RP23-24O15 on chromosome X, complete
             sequence
          Length = 197729

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   gagatggagatgcctgatat 368
             ||||||||||||||||||||
Sbjct: 17778 gagatggagatgcctgatat 17759


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,990,541
Number of Sequences: 3902068
Number of extensions: 3990541
Number of successful extensions: 78090
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78053
Number of HSP's gapped (non-prelim): 37
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)