ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl01d10 |
|---|---|
| Clone Library Name | barley_pub |
>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9| Length = 556 Score = 45.1 bits (105), Expect = 8e-05 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%) Frame = +2 Query: 149 NPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGA 328 +P+G S +SP+G S +P+ T G+ P NNNP+ +G+ Sbjct: 118 SPYGNSDSSPYGNASASPYDT--GYNAPLQQNNNPYG----------SMNNSYSNKSYGS 165 Query: 329 TS----TFGQPSAPAFGATSTGAFGQQ-STPALGATSTGAFG 439 S T+ PS A + + GA GQ+ S P S +G Sbjct: 166 NSYSGDTYASPSPQASSSNNNGATGQRPSNPYANMNSQDPYG 207
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 45.1 bits (105), Expect = 8e-05 Identities = 41/109 (37%), Positives = 46/109 (42%), Gaps = 8/109 (7%) Frame = +2 Query: 137 FGANNPFGQSSAS---PFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 307 FG + G SS S FG + GT FG S + N AP Sbjct: 1064 FGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFG--SLSQNTLGAPSQGSPFAFSVGSTPE 1121 Query: 308 XXXXFGATST--FGQPSAPAFGATSTGA---FGQQSTPALGATSTGAFG 439 FG TST FGQ SAPA G +TG+ FG STPA G G FG Sbjct: 1122 SKPVFGGTSTPTFGQ-SAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFG 1169 Score = 34.3 bits (77), Expect = 0.14 Identities = 40/138 (28%), Positives = 49/138 (35%), Gaps = 32/138 (23%) Frame = +2 Query: 125 QPAMFGANNP---FGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXX- 292 QPA FG+ FG ++ S FG +T TQ S++ AP PF Sbjct: 1000 QPA-FGSTTSVFSFGSATTSGFGAAATAATTTQTTNSGSSSSLFGSSAPSPFTFGGSAAP 1058 Query: 293 -------------XXXXXXXXXFGA--------TSTFGQPSAPAFGATSTG---AFGQQS 400 FG+ T++FG S GA S G AF S Sbjct: 1059 AGSGGFGLSATPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSPFAFSVGS 1118 Query: 401 T----PALGATSTGAFGQ 442 T P G TST FGQ Sbjct: 1119 TPESKPVFGGTSTPTFGQ 1136 Score = 30.4 bits (67), Expect = 2.1 Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 7/112 (6%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPK---PFXXXXXXXX 295 QP S S FG T T QP+ T +N P PF Sbjct: 866 QPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFNIPFSSSAKPAL 925 Query: 296 XX---XXXXXXFGATSTFGQPS-APAFGATSTGAFGQQSTPALGATSTGAFG 439 FGAT +P+ AP+FG++ T S P+ A + FG Sbjct: 926 PTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPS-AAPAPATFG 976 Score = 30.0 bits (66), Expect = 2.7 Identities = 31/103 (30%), Positives = 39/103 (37%), Gaps = 9/103 (8%) Frame = +2 Query: 146 NNPFGQSSASPF-----GQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 N PF SSA P G S FG G +P+ AP F Sbjct: 914 NIPFS-SSAKPALPTYPGANSQPTFGATDGATKPA------LAPS-FGSSFTFGNSVASA 965 Query: 311 XXXFGATSTFGQPSAPAFG----ATSTGAFGQQSTPALGATST 427 A +TFG + PAFG A ST + PA G+T++ Sbjct: 966 PSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTS 1008
>NU100_YEAST (Q02629) Nucleoporin NUP100/NSP100 (Nuclear pore protein| NUP100/NSP100) Length = 959 Score = 44.7 bits (104), Expect = 1e-04 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Frame = +2 Query: 134 MFGA-NNPFGQSSASPFGQTSTNPFGT--QQG--FGQPSTTNNNPFAPKPFXXXXXXXXX 298 +FGA NN ++ S FG ++ FGT QQG FGQ S NN F + Sbjct: 188 IFGAGNNSQSNTTGSLFGNQQSSAFGTNNQQGSLFGQQSQNTNNAFGNQ------NQLGG 241 Query: 299 XXXXXXXFGATSTFGQPSAPAFGATST--GAFGQQSTPALGATSTGAFGQ 442 G+ S FGQ + T+ G FGQ ++ G++++G FGQ Sbjct: 242 SSFGSKPVGSGSLFGQSNNTLGNTTNNRNGLFGQMNSSNQGSSNSGLFGQ 291 Score = 34.7 bits (78), Expect = 0.11 Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Frame = +2 Query: 134 MFGANNPFGQSSASPFGQTSTNP---FGT----------QQG---FGQPSTTNNNPFAPK 265 +FGA P G + + G +ST P FGT QQG FG TN PF Sbjct: 394 LFGAK-PAGTTGSLFGGNSSTQPNSLFGTTNVPTSNTQSQQGNSLFGATKLTNM-PFGGN 451 Query: 266 PFXXXXXXXXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 P S FG +A ++ G FG + + T+TG FG Sbjct: 452 PTANQSGSGNSLFGTKPASTTGSLFGNNTASTTVPSTNGLFGNNANNSTSTTNTGLFG 509 Score = 34.3 bits (77), Expect = 0.14 Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 3/108 (2%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 +P G+N FG +++S GQ S P FG + NN+ Sbjct: 6 RPMFGGSNLSFGSNTSSFGGQQSQQP---NSLFGNSNNNNNS--------------TSNN 48 Query: 305 XXXXXFGATSTFGQPSAPAFGATST---GAFGQQSTPALGATSTGAFG 439 G TS G S FG +T GAFGQ ++GAT FG Sbjct: 49 AQSGFGGFTSAAGSNSNSLFGNNNTQNNGAFGQ----SMGATQNSPFG 92
>NUP98_RAT (P49793) Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98| kDa nucleoporin) Length = 937 Score = 44.7 bits (104), Expect = 1e-04 Identities = 44/138 (31%), Positives = 50/138 (36%), Gaps = 36/138 (26%) Frame = +2 Query: 134 MFGANNPFGQSSAS-PFGQTSTNP-----FGTQQGFGQPSTTNNNPF----APKPFXXXX 283 +FG N S S PFGQ +T P FG GQPST F A +P Sbjct: 272 LFGQQNQQTTSLFSKPFGQATTTPNTGFSFGNTSTLGQPSTNTMGLFGVTQASQPGGLFG 331 Query: 284 XXXXXXXXXXXXFGATSTFGQP-------------------------SAPAFGATSTGAF 388 G T FGQP SAP+FG TS G F Sbjct: 332 TATNTSTGTAFGTG-TGLFGQPNTGFGAVGSTLFGNNKLTTFGTSTTSAPSFGTTSGGLF 390 Query: 389 GQQSTPALGA-TSTGAFG 439 G + T LG T+T FG Sbjct: 391 GNKPTLTLGTNTNTSNFG 408 Score = 30.8 bits (68), Expect = 1.6 Identities = 30/106 (28%), Positives = 35/106 (33%), Gaps = 4/106 (3%) Frame = +2 Query: 134 MFGANN--PFGQS--SASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXX 301 +FG N FG S SA FG TS FG + + TN + F F Sbjct: 363 LFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFG---FGTNNSGSSIF 419 Query: 302 XXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 + G A GA FG G TGAFG Sbjct: 420 GSKPAAGTLGTGLGTGFGTALGAGQASLFGNNQPKIGGPLGTGAFG 465
>PO121_RAT (P52591) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1199 Score = 43.9 bits (102), Expect = 2e-04 Identities = 40/109 (36%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Frame = +2 Query: 137 FGANNPFGQSSAS---PFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 307 FG + G S S FG + GT FG S + N AP Sbjct: 1062 FGLSATPGTGSTSGTFSFGSGQSGTTGTTTSFGG-SLSQNTLGAPSQSSPFAFSVGSTPE 1120 Query: 308 XXXXFGATST--FGQPSAPAFGATSTGA---FGQQSTPALGATSTGAFG 439 FG TST FGQ SAPA G +TG+ FG STPA G G FG Sbjct: 1121 SKPVFGGTSTPTFGQ-SAPAPGVGTTGSSLSFGAPSTPAQGFVGVGPFG 1168 Score = 30.8 bits (68), Expect = 1.6 Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 2/98 (2%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATS 334 FG S+ SPF + GFG +T + F G+ S Sbjct: 1040 FGSSTPSPFTFGGSAAPAGGGGFGLSATPGTGSTSGT-FSFGSGQSGTTGTTTSFGGSLS 1098 Query: 335 --TFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQ 442 T G PS + A S G+ +S P G TST FGQ Sbjct: 1099 QNTLGAPSQSSPFAFSVGST-PESKPVFGGTSTPTFGQ 1135
>NU153_RAT (P49791) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1468 Score = 42.4 bits (98), Expect = 5e-04 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 2/105 (1%) Frame = +2 Query: 134 MFG-ANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 +FG A+NP S+ ++ST+ G+P+TT++ A PF Sbjct: 1220 VFGQASNPVSSSAFGNSAESSTSQPLLFPQDGKPATTSSTASAAPPFVFGTGASSNSTVS 1279 Query: 311 XX-XFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQ 442 FGAT+T S+ +F TG ++PA GA T FGQ Sbjct: 1280 SGFTFGATTT--SSSSGSFFVFGTGHSAPSASPAFGANQTPTFGQ 1322 Score = 29.6 bits (65), Expect = 3.5 Identities = 23/95 (24%), Positives = 32/95 (33%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATS 334 F S A P + S FG + T + A KP + S Sbjct: 1144 FSFSVAKPSVKESDQLAKATFAFGNQTNTTTDQGAAKPAFSFLNSSSSSSSTPATSSSAS 1203 Query: 335 TFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 FG ++ + + FGQ S P S+ AFG Sbjct: 1204 IFGSSTSSSSPPVAAFVFGQASNP----VSSSAFG 1234
>YAUF_SCHPO (Q10168) Hypothetical protein C26A3.15c in chromosome I| Length = 598 Score = 40.4 bits (93), Expect = 0.002 Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 4/103 (3%) Frame = +2 Query: 137 FGANNPFGQ--SSASPFGQTSTNPFGTQQGFGQPSTT--NNNPFAPKPFXXXXXXXXXXX 304 F P GQ S+A+ G T+T+ GT FG+P+TT N P AP Sbjct: 270 FSFGKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDN 329 Query: 305 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGA 433 FG TS + ++ ATS + PA GA T + Sbjct: 330 KPTFSFGNTSKPTENTSTT--ATSAPPLSNNTKPAEGANQTSS 370 Score = 30.4 bits (67), Expect = 2.1 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Frame = +2 Query: 140 GANNPFGQSS----ASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 307 G+ N G S +S G +TNP G+ FG ++NN+ KP Sbjct: 112 GSANSTGDKSKNTASSATGAATTNPSGSTFNFG---SSNNSFNFGKPASTTNTTTPAAAS 168 Query: 308 XXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGA 418 S FG+P+A + + A +TPA G+ Sbjct: 169 TG------SLFGKPAATGTTSNAPPASSTSTTPATGS 199
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 39.7 bits (91), Expect = 0.003 Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 3/108 (2%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 ++FGA + SS+ FGQ+S N G FGQ +N F P Sbjct: 1770 SVFGAASSTSSSSSFSFGQSSPNTGGGL--FGQ---SNAPAFGQSPGFGQGGSVFGGTSA 1824 Query: 311 XXXFGATSTFGQPSAPAFGATSTGA-FGQQSTPALGATSTG--AFGQQ 445 ATS F A FG+++TG+ FGQ A STG FGQQ Sbjct: 1825 ATTTAATSGFSFCQASGFGSSNTGSVFGQ-------AASTGGIVFGQQ 1865 Score = 35.4 bits (80), Expect = 0.065 Identities = 34/117 (29%), Positives = 46/117 (39%), Gaps = 14/117 (11%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 A +N FG S A FG +++ FG Q+ G S+ + A + F Sbjct: 1914 ATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGS-VASQGFGFSSPNKTGGFGA 1972 Query: 311 XXXFGATSTFGQP----------SAPAF----GATSTGAFGQQSTPALGATSTGAFG 439 FG+ TFG SAPAF G+T FG+ + A S G FG Sbjct: 1973 APVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTA----AASAGGFG 2025 Score = 33.5 bits (75), Expect = 0.25 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Frame = +2 Query: 125 QPAMFGANNP-FGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXX 301 Q + G ++P FG ++ FGQT+ FG FGQ +++ + F+ Sbjct: 1702 QVSSSGFSSPAFGTTAPGVFGQTT---FGQASVFGQSASSAASVFS-------------- 1744 Query: 302 XXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQ 442 F + FGQP++ +TS FG S+ + ++S+ +FGQ Sbjct: 1745 -FSQPGFSSVPAFGQPASSTPTSTSGSVFGAASSTS--SSSSFSFGQ 1788 Score = 32.7 bits (73), Expect = 0.42 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 28/135 (20%) Frame = +2 Query: 125 QPAMFGANNP---FGQSSASP---FGQTSTNPFGTQQGFG--------------QPS--T 238 Q + FG++N FGQ++++ FGQ S++ G+ G G +PS Sbjct: 1838 QASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDA 1897 Query: 239 TNNNPFAPKPFXXXXXXXXXXXXXXXXFGATST------FGQPSAPAFGATSTGAFGQQS 400 N NPF+ FG+T+T FG A FG ++ +FG+Q Sbjct: 1898 ANKNPFS---------------SASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQK 1942 Query: 401 TPALGATSTGAFGQQ 445 ++ G+ Q Sbjct: 1943 PTGTFSSGGGSVASQ 1957 Score = 32.0 bits (71), Expect = 0.71 Identities = 29/113 (25%), Positives = 40/113 (35%), Gaps = 8/113 (7%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 Q A A + FGQ + S + P + GF P+ P Sbjct: 1676 QVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAP---------------GV 1720 Query: 305 XXXXXFGATSTFGQPSAPAF--------GATSTGAFGQQSTPALGATSTGAFG 439 FG S FGQ ++ A G +S AFGQ ++ +TS FG Sbjct: 1721 FGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFG 1773 Score = 30.0 bits (66), Expect = 2.7 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 25/119 (21%) Frame = +2 Query: 161 QSSASPFGQTSTN-----PFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXF- 322 ++S++P ++T+ P FG T+ ++ FA P Sbjct: 1610 ETSSTPIASSTTSIVAPGPSAEAAAFGTV-TSGSSVFAQPPAASSSSAFNQLTNNTATAP 1668 Query: 323 GATSTFGQPSAPAFGATSTGAFGQQ-------------------STPALGATSTGAFGQ 442 AT FGQ +A +T+ FGQQ S+PA G T+ G FGQ Sbjct: 1669 SATPVFGQVAA----STAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQ 1723 Score = 28.9 bits (63), Expect = 6.0 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 4/85 (4%) Frame = +2 Query: 152 PFGQSSASPFGQ----TSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 319 P SS+S F Q T+T P T FGQ + + AP F Sbjct: 1648 PPAASSSSAFNQLTNNTATAPSATPV-FGQVAAST----APSLFGQQTGSTASTAAATPQ 1702 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQ 394 ++ S+PAFG T+ G FGQ Sbjct: 1703 VSSSGF----SSPAFGTTAPGVFGQ 1723
>NUP98_HUMAN (P52948) Nuclear pore complex protein Nup98-Nup96 precursor| [Contains: Nuclear pore complex protein Nup98 (Nucleoporin Nup98) (98 kDa nucleoporin); Nuclear pore complex protein Nup96 (Nucleoporin Nup96) (96 kDa nucleoporin)] Length = 1729 Score = 39.3 bits (90), Expect = 0.004 Identities = 43/137 (31%), Positives = 50/137 (36%), Gaps = 35/137 (25%) Frame = +2 Query: 134 MFGANNPFGQSSAS-PFGQTSTNP-----FGTQQGFGQPSTTNNNPF----APKP----- 268 +FG N S S PFGQ +T FG GQPST F A +P Sbjct: 273 LFGQQNQQTTSLFSKPFGQATTTQNTGFSFGNTSTIGQPSTNTMGLFGVTQASQPGGLFG 332 Query: 269 FXXXXXXXXXXXXXXXXFGATST-----------------FGQP--SAPAFGATSTGAFG 391 FG T+T FG SAP+FG TS G FG Sbjct: 333 TATNTSTGTAFGTGTGLFGQTNTGFGAVGSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFG 392 Query: 392 QQSTPALGA-TSTGAFG 439 + T LG T+T FG Sbjct: 393 NKPTLTLGTNTNTSNFG 409 Score = 30.4 bits (67), Expect = 2.1 Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGTQQ-----GFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 319 FG +S FG T GT GFG +T+ N+ F KP Sbjct: 383 FGTTSGGLFGNKPTLTLGTNTNTSNFGFGT-NTSGNSIFGSKPAPGTLGT---------- 431 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 G + FG A GA FG G TGAFG Sbjct: 432 -GLGAGFGT----ALGAGQASLFGNNQPKIGGPLGTGAFG 466 Score = 28.9 bits (63), Expect = 6.0 Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 13/54 (24%) Frame = +2 Query: 320 FGATSTFGQ------PSAPAFGATSTGA-------FGQQSTPALGATSTGAFGQ 442 FG TSTFGQ S AFG ++ G+ FG T G T +F Q Sbjct: 17 FGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPGGLFGTSSFSQ 70
>NUPL_HUMAN (P52594) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein)| (Rev-interacting protein) (Rev/Rex activation domain-binding protein) Length = 562 Score = 38.1 bits (87), Expect = 0.010 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 2/100 (2%) Frame = +2 Query: 152 PFGQSSASPFGQT-STNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGA 328 P S +PFG T STNPF G S+TN PF Sbjct: 418 PASSSVPAPFGATPSTNPFVAAAGPSVASSTN-------PFQTNARGATAATFGTASMSM 470 Query: 329 TSTFGQPSAPAFGATSTGAFGQQSTPALGA-TSTGAFGQQ 445 + FG P+ + + +G+F Q + PA A AF QQ Sbjct: 471 PTGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQ 510
>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 562 Score = 38.1 bits (87), Expect = 0.010 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 2/100 (2%) Frame = +2 Query: 152 PFGQSSASPFGQT-STNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGA 328 P S +PFG T STNPF G S+TN PF Sbjct: 418 PASSSVPAPFGATPSTNPFVAAAGPSVASSTN-------PFQTNARGATAATFGTASMSM 470 Query: 329 TSTFGQPSAPAFGATSTGAFGQQSTPALGA-TSTGAFGQQ 445 + FG P+ + + +G+F Q + PA A AF QQ Sbjct: 471 PAGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQ 510
>NUP57_YEAST (P48837) Nucleoporin NUP57 (Nuclear pore protein NUP57)| Length = 541 Score = 38.1 bits (87), Expect = 0.010 Identities = 34/113 (30%), Positives = 42/113 (37%), Gaps = 11/113 (9%) Frame = +2 Query: 140 GANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 319 G+NN FG A G + FGQ + N + F Sbjct: 6 GSNNGFGNKPAGSTGFS----------FGQNNNNTNTQPSASGFGFGGSQPNSGTATTGG 55 Query: 320 FGA---TSTFGQPSAPAFGA------TSTGAFGQQSTPALG--ATSTGAFGQQ 445 FGA T+TFG + G + G+ G ST A G AT TG FGQQ Sbjct: 56 FGANQATNTFGSNQQSSTGGGLFGNKPALGSLGSSSTTASGTTATGTGLFGQQ 108
>NUPL_MOUSE (Q8K2K6) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 37.7 bits (86), Expect = 0.013 Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 2/108 (1%) Frame = +2 Query: 128 PAMFGANNPFGQSSASPFGQT-STNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 P A S +PFG T STNPF G S+TN PF Sbjct: 409 PVGASAQTQPASSGPAPFGATPSTNPFVAATGPSAASSTN-------PFQTNARGATAAT 461 Query: 305 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGA-TSTGAFGQQ 445 + FG P+ + + +G+F Q + PA A AF QQ Sbjct: 462 FGTASMSMPAGFGTPAQYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQ 509
>NU153_HUMAN (P49790) Nuclear pore complex protein Nup153 (Nucleoporin Nup153)| (153 kDa nucleoporin) Length = 1475 Score = 37.7 bits (86), Expect = 0.013 Identities = 34/104 (32%), Positives = 43/104 (41%), Gaps = 8/104 (7%) Frame = +2 Query: 155 FGQSS----ASPFGQTSTNPFGTQQGFGQPS---TTNNNPFAPKPFXXX-XXXXXXXXXX 310 FGQSS +S FG T+ + F Q S TT++ A PF Sbjct: 1228 FGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTS 1287 Query: 311 XXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQ 442 FGAT+T SA + TG ++PA GA T FGQ Sbjct: 1288 GFGFGATTT--SSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQ 1329 Score = 31.6 bits (70), Expect = 0.93 Identities = 23/99 (23%), Positives = 34/99 (34%) Frame = +2 Query: 143 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXF 322 + + F S P + S P FG ++T + A KP Sbjct: 1147 SKSTFSFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATS 1206 Query: 323 GATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 FG ++ + +T FGQ S P S+ AFG Sbjct: 1207 AGGGIFGSSTSSSNPPVATFVFGQSSNP----VSSSAFG 1241 Score = 30.8 bits (68), Expect = 1.6 Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 15/104 (14%) Frame = +2 Query: 179 FGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATSTFGQ---- 346 FG +++ T GFG +TT ++ A F T TFGQ Sbjct: 1275 FGPGASSNNTTTSGFGFGATTTSSS-AGSSFVFGTGPSAPSASPAFGANQTPTFGQSQGA 1333 Query: 347 --PSAPAFG--ATSTGAF---GQQSTPALGATSTGA----FGQQ 445 P+ P FG ++ST F Q + P G S+ + FGQQ Sbjct: 1334 SQPNPPGFGSISSSTALFPTGSQPAPPTFGTVSSSSQPPVFGQQ 1377 Score = 28.5 bits (62), Expect = 7.9 Identities = 31/106 (29%), Positives = 41/106 (38%), Gaps = 2/106 (1%) Frame = +2 Query: 128 PAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQ-PSTTNNNPFAPKPFXXXXXXXXXXX 304 P+ A+ FG + FGQ+ GFG S+T P +P Sbjct: 1310 PSAPSASPAFGANQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQP------------ 1357 Query: 305 XXXXXFGATSTFGQPSAPAFG-ATSTGAFGQQSTPALGATSTGAFG 439 FG S+ QP P FG S AFG +TP ++S FG Sbjct: 1358 -APPTFGTVSSSSQP--PVFGQQPSQSAFGSGTTP--NSSSAFQFG 1398
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 37.4 bits (85), Expect = 0.017 Identities = 35/107 (32%), Positives = 42/107 (39%), Gaps = 9/107 (8%) Frame = +2 Query: 146 NNPFGQSSASP----FGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 313 NN G ++A+ FG FG + T+ F P Sbjct: 7 NNAIGGATAATGAFAFGARPATTTAPPPSFG--AATSTPTFGAAPATTSLFAAPAATPAF 64 Query: 314 XXFGATSTFGQP-SAPAFGATSTG--AFG-QQSTPALG-ATSTGAFG 439 AT FG P S P FGATST AFG +TPA G +T AFG Sbjct: 65 GAPAATPAFGAPASTPGFGATSTAAPAFGTAAATPAFGIPAATSAFG 111 Score = 28.9 bits (63), Expect = 6.0 Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 16/110 (14%) Frame = +2 Query: 143 ANNPFGQSSASP-FGQ-TSTNPFGTQQG---FGQPSTTNNNPF-APKP----------FX 274 A FG +A+P FG +T+ FG FG P++T + F AP P F Sbjct: 124 ATPAFGAPAATPAFGAPAATSAFGAPAATTAFGAPASTQASAFGAPAPAVGTVAPTFSFA 183 Query: 275 XXXXXXXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATS 424 FG T+T + PA ++ G+F A A S Sbjct: 184 TPATSAPTTAPPAFGFGTTATTAAAAMPASLSSGIGSFSFPKPQATTAAS 233
>NU189_SCHPO (Q9UTK4) Nucleoporin nup189 (Nuclear pore protein nup189)| Length = 1778 Score = 37.4 bits (85), Expect = 0.017 Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 1/97 (1%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXX 316 FG NN Q + FG S P T G STT +P Sbjct: 17 FGQNN---QQTGGLFGSNSNTPGNTLFGSQNTSTTGFGQNTTQPLFGSNTNGGL------ 67 Query: 317 XFGATSTFGQPSAPAFGATS-TGAFGQQSTPALGATS 424 FG + FG +S TG FGQ +TPA G T+ Sbjct: 68 -FGNRNNTTTTGGTGFGMSSGTGMFGQSNTPAFGGTN 103 Score = 32.3 bits (72), Expect = 0.55 Identities = 31/92 (33%), Positives = 35/92 (38%), Gaps = 3/92 (3%) Frame = +2 Query: 137 FGANNPFG-QSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 313 FGANN + S FG T+T P FGQ NN APKP Sbjct: 437 FGANNNAATKPSGFGFGSTTTTPASGGFSFGQ--NANN---APKPAFGSTATTAPKPAGT 491 Query: 314 XXFGATSTFGQPSAPAFGATSTGA--FGQQST 403 FG G + A AT TG FG +T Sbjct: 492 GLFGGLGA-GANTNTATNATGTGGSLFGNANT 522 Score = 32.0 bits (71), Expect = 0.71 Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 5/107 (4%) Frame = +2 Query: 134 MFGANNPFGQSSASPFGQT--STNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 307 M FGQS+ FG T +TNP G G +T NNN Sbjct: 84 MSSGTGMFGQSNTPAFGGTNNATNPSG--GGLFGSNTANNN------------------- 122 Query: 308 XXXXFGATSTFG-QPSAPAFGATSTGA--FGQQSTPALGATSTGAFG 439 G + +FG + FG+ TG FG +TPA +T AFG Sbjct: 123 --ANTGTSFSFGSNAGSTGFGSQGTGGGLFGSSTTPA----TTNAFG 163 Score = 31.6 bits (70), Expect = 0.93 Identities = 36/127 (28%), Positives = 44/127 (34%), Gaps = 26/127 (20%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNP----FGTQQ-GFGQPSTTNNNPFAPKP--------- 268 A G FG S+ T+ P GT GFG + T NN AP Sbjct: 375 AATGTGTGFGSSTGGFGSNTNNQPNSGTMGTGLFGFGANNNTANNNTAPTSTFGGNNSSN 434 Query: 269 FXXXXXXXXXXXXXXXXFGATST--------FGQPS----APAFGATSTGAFGQQSTPAL 412 F FG+T+T FGQ + PAFG+T+T A T Sbjct: 435 FSFGANNNAATKPSGFGFGSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLF 494 Query: 413 GATSTGA 433 G GA Sbjct: 495 GGLGAGA 501 Score = 31.6 bits (70), Expect = 0.93 Identities = 40/134 (29%), Positives = 50/134 (37%), Gaps = 30/134 (22%) Frame = +2 Query: 128 PAMFGANNPFGQS------SASPFGQ---TSTNP----FGTQQGFGQPSTTNNNPFAPKP 268 PA + PFGQ+ +A+PFG T+T P FG FG S T N F Sbjct: 243 PAFGASTTPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFG--SNTTNTGFGSGT 300 Query: 269 FXXXXXXX-----XXXXXXXXXFGATSTFGQ--PSAPAFGATS--------TGAFGQQ-- 397 FG STF Q P+ FG+T+ TG FG Sbjct: 301 NNASGGLFGQNNNTTSTPSTGLFGG-STFNQQKPAFSGFGSTTNTTNTGTGTGLFGSNNA 359 Query: 398 STPALGATSTGAFG 439 + G T+ G FG Sbjct: 360 TNTGTGQTTGGLFG 373
>NU116_YEAST (Q02630) Nucleoporin NUP116/NSP116 (Nuclear pore protein| NUP116/NSP116) Length = 1113 Score = 36.6 bits (83), Expect = 0.029 Identities = 28/92 (30%), Positives = 34/92 (36%), Gaps = 2/92 (2%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQG--FGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 ++FG NN QS+ FGQ N +Q G FGQ + NN PF Sbjct: 468 SIFGQNNQQQQSTGGLFGQ-QNNQSQSQPGGLFGQTNQNNNQPFGQNGLQQPQQNNSLFG 526 Query: 305 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQS 400 FG TS F + S QQS Sbjct: 527 AKPTGFGNTSLFSNSTTNQSNGISGNNLQQQS 558 Score = 33.9 bits (76), Expect = 0.19 Identities = 34/106 (32%), Positives = 40/106 (37%), Gaps = 4/106 (3%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQGFG----QPSTTNNNPFAPKPFXXXXXXXXXXX 304 FGAN P +S FG T+ NP G Q S TN F + Sbjct: 249 FGANKP--ATSGGLFGNTTNNPTNGTNNTGLFGQQNSNTNGGLFGQQQ------------ 294 Query: 305 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQ 442 FGA + + AFG + GAF QQ T S G FGQ Sbjct: 295 ---NSFGANNV---SNGGAFGQVNRGAFPQQQTQ---QGSGGIFGQ 331 Score = 31.6 bits (70), Expect = 0.93 Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXX--XXXXXXFGA 328 FGQ A+ T T G+ GFG +T + F FG Sbjct: 207 FGQKPATGMFGTGT---GSGGGFGSGATNSTGLFGSSTNLSGNSAFGANKPATSGGLFGN 263 Query: 329 TSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 T+ + P G +TG FGQQ++ T+ G FGQQ Sbjct: 264 TT-----NNPTNGTNNTGLFGQQNS----NTNGGLFGQQ 293
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 36.6 bits (83), Expect = 0.029 Identities = 27/99 (27%), Positives = 42/99 (42%) Frame = +2 Query: 143 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXF 322 A+N + Q + +G T P QG+ Q S+ P+ + + Sbjct: 2 ASNDYTQQATQSYGAYPTQP---GQGYSQQSS---QPYGQQSYSGYSQSTD--------- 46 Query: 323 GATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 TS +GQ S ++G + +G QSTP G STG +G Sbjct: 47 --TSGYGQSSYSSYGQSQNTGYGTQSTPQ-GYGSTGGYG 82
>NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 36.6 bits (83), Expect = 0.029 Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 2/96 (2%) Frame = +2 Query: 164 SSASPFGQT-STNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATSTF 340 S +PFG T STNPF G S+TN PF + F Sbjct: 421 SGPAPFGATPSTNPFVAATGPSAASSTN-------PFQTNARGATAATFGTASMSMPAGF 473 Query: 341 GQPSAPAFGATSTGAFGQQSTPALGA-TSTGAFGQQ 445 G P+ + + +G+F Q PA A AF QQ Sbjct: 474 GTPAQYSLPTSFSGSFQQPPFPAQAAFPQQTAFSQQ 509
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 36.6 bits (83), Expect = 0.029 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 7/108 (6%) Frame = +2 Query: 143 ANNPFGQSSASPFGQ-TSTNPFGTQQ---GFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 +N P+GQ S +GQ T T+ +G +GQ + + AP+ + Sbjct: 29 SNQPYGQQSYGGYGQSTDTSGYGQSSYSGSYGQTQNSYSTQSAPQGYGSAGGYGSSQSSQ 88 Query: 311 XXXFGATSTF---GQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 +G S++ GQ AP+ + S G+ Q S G G +GQQ Sbjct: 89 SS-YGQQSSYPGYGQQPAPSSTSGSYGSSSQSS--GYGQPQGGGYGQQ 133 Score = 28.5 bits (62), Expect = 7.9 Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 1/92 (1%) Frame = +2 Query: 125 QPAMFGANNPFGQSS-ASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXX 301 QPA + +G SS +S +GQ +G Q G+G + + P Sbjct: 103 QPAPSSTSGSYGSSSQSSGYGQPQGGGYGQQSGYGGQQQSYGQQQSYNPPQGYGQQSQYN 162 Query: 302 XXXXXXFGATSTFGQPSAPAFGATSTGAFGQQ 397 G ++GQ G +G Q Sbjct: 163 SSGGGGGGGGGSYGQDQPSMSSGGGGGGYGNQ 194
>NU124_SCHPO (Q09904) Nucleoporin nup124 (Nuclear pore protein nup124)| Length = 1159 Score = 35.8 bits (81), Expect = 0.049 Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 5/110 (4%) Frame = +2 Query: 125 QPA-MFGANNPFGQSSASPFG-QTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXX 298 QPA MFG + P SSA FG Q+ TNP GFG + T N P Sbjct: 1007 QPASMFGTSTP-APSSAFAFGNQSGTNP-AAPAGFGGITNTATN--NPPSTGFTFTPSNA 1062 Query: 299 XXXXXXXFGATSTFGQPSAPAFGATSTGAF--GQQSTPALGATSTG-AFG 439 FGA +T PS A+ AF G+ S PA STG +FG Sbjct: 1063 GSTAAPMFGAGNT-PNPSGSINNASQAFAFGSGEPSNPASNPPSTGFSFG 1111
>SPR1B_MOUSE (Q62267) Cornifin B (Small proline-rich protein 1B) (SPR1B) (SPR1| B) Length = 153 Score = 35.0 bits (79), Expect = 0.084 Identities = 18/37 (48%), Positives = 19/37 (51%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PKAP P+A C PKAP PKA PKV Sbjct: 81 CHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPKV 117 Score = 33.5 bits (75), Expect = 0.25 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPK 337 C PKAP P+A C PKAP PKA PK Sbjct: 73 CHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPK 108 Score = 33.5 bits (75), Expect = 0.25 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPK 337 C PKAP P+A C PKAP PKA PK Sbjct: 65 CHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPK 100 Score = 33.5 bits (75), Expect = 0.25 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPK 337 C PKAP P+A C PKAP PKA PK Sbjct: 57 CHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPK 92 Score = 33.5 bits (75), Expect = 0.25 Identities = 17/36 (47%), Positives = 18/36 (50%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPK 337 C PKAP P+A C PKAP PKA PK Sbjct: 49 CHPKAPEPCHPKAPEPCHPKAPEPCHPKAPEPCHPK 84 Score = 32.0 bits (71), Expect = 0.71 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPK 337 C PKAP P+A C PKAP PK PK Sbjct: 89 CHPKAPEPCHPKAPEPCHPKAPEPCHPKVPEPCLPK 124 Score = 31.2 bits (69), Expect = 1.2 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKA 358 C PKAP P+A C PK P PKA Sbjct: 97 CHPKAPEPCHPKAPEPCHPKVPEPCLPKA 125
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 35.0 bits (79), Expect = 0.084 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%) Frame = +2 Query: 143 ANNPFGQSSASPFGQTS-TNPFGTQ---QGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 ++ P+GQ S S +GQ++ T+ +G +GQ T + Sbjct: 29 SSQPYGQQSYSGYGQSADTSGYGQSSYGSSYGQTQNTGYGTQSAPQGYGSTGGYGSSQSS 88 Query: 311 XXXFGATSTF-GQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 +G S++ G PA +TS G + + G +G +GQQ Sbjct: 89 QSSYGQQSSYPGYGQQPAPSSTSGSYGGSSQSSSYGQPQSGGYGQQ 134 Score = 32.3 bits (72), Expect = 0.55 Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 3/110 (2%) Frame = +2 Query: 125 QPAMFGANNPFGQSS-ASPFGQTSTNPFGTQQGFG--QPSTTNNNPFAPKPFXXXXXXXX 295 QPA + +G SS +S +GQ + +G Q G+G Q S P Sbjct: 104 QPAPSSTSGSYGGSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQNQY 163 Query: 296 XXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 G +GQ + G G +G Q G G GQQ Sbjct: 164 NSSSGGGGGGGGGNYGQDQSSMSGGGGGGGYGNQDQSGGGGGGYGG-GQQ 212
>GLH4_CAEEL (O76743) ATP-dependent RNA helicase glh-4 (EC 3.6.1.-) (Germline| helicase 4) Length = 1156 Score = 35.0 bits (79), Expect = 0.084 Identities = 41/127 (32%), Positives = 50/127 (39%), Gaps = 34/127 (26%) Frame = +2 Query: 161 QSSASPFGQTSTN--PFG-------TQQGFGQPSTTNNNPF--------APKPFXXXXXX 289 +SS P +TST+ FG T GFG PSTT+++ A KP Sbjct: 363 ESSGFPTKETSTSGGTFGSGFGGKPTSTGFGAPSTTDSSSGQQTAGFGGASKPGFGGDSS 422 Query: 290 XXXXXXXXXXFGA--------------TSTFGQPSAPA-FGATSTG--AFGQQSTPALGA 418 FG T+ FG PA FGA+S+ AFGQQS GA Sbjct: 423 TGFGSGLKAGFGGHRASTAENSGLPTETTGFGGKLPPAGFGASSSNESAFGQQSKGFGGA 482 Query: 419 TSTGAFG 439 T G G Sbjct: 483 TKNGFGG 489 Score = 33.1 bits (74), Expect = 0.32 Identities = 30/99 (30%), Positives = 36/99 (36%), Gaps = 18/99 (18%) Frame = +2 Query: 149 NPFGQSSASPFGQTSTNPFG--TQQGFG--QPSTTNNNPFAPKPFXXXXXXXXXXXX--- 307 N FG S+S FG S FG + G G +P T ++ F K Sbjct: 328 NGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGATESSGFPTKETSTSGGTFGSGFGGKP 387 Query: 308 XXXXFGATST-----------FGQPSAPAFGATSTGAFG 391 FGA ST FG S P FG S+ FG Sbjct: 388 TSTGFGAPSTTDSSSGQQTAGFGGASKPGFGGDSSTGFG 426 Score = 31.2 bits (69), Expect = 1.2 Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 8/105 (7%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGT--QQGFG--QPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXF 322 FG +S FG S+ FG+ + GFG + ST N+ + F Sbjct: 409 FGGASKPGFGGDSSTGFGSGLKAGFGGHRASTAENSGLPTE------TTGFGGKLPPAGF 462 Query: 323 GATST----FGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 GA+S+ FGQ S FG + FG S+ + G +G G Q Sbjct: 463 GASSSNESAFGQQSK-GFGGATKNGFGGDSSNSFGKRDSGFGGPQ 506 Score = 30.0 bits (66), Expect = 2.7 Identities = 40/146 (27%), Positives = 51/146 (34%), Gaps = 39/146 (26%) Frame = +2 Query: 125 QPAM---FG--ANNPFGQSSASPFG-----QTSTNPFGT------QQGFGQPSTTNNNPF 256 QPA+ FG A FG SS+S FG T ++ F T Q GFG S+T Sbjct: 212 QPAVVSGFGGAAKMGFGGSSSSGFGGQKAGATESSGFPTKETSTSQPGFGGDSSTGFGSG 271 Query: 257 APKPFXXXXXXXXXXXXX------------XXXFGATST-----------FGQPSAPAFG 367 F FGA+S+ FG + FG Sbjct: 272 LKAGFGGHGAGAAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQSKGFGGATKNGFG 331 Query: 368 ATSTGAFGQQSTPALGATSTGAFGQQ 445 S+ +FG S G TS+ G Q Sbjct: 332 GDSSSSFGSGSKAGFGGTSSSGIGGQ 357 Score = 28.5 bits (62), Expect = 7.9 Identities = 25/102 (24%), Positives = 35/102 (34%), Gaps = 9/102 (8%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFG-----TQQGFGQPSTTNN--NPFAPKPFXXXXXXXXXXXXXX 313 FG S++ FG FG + G P+ T F Sbjct: 260 FGGDSSTGFGSGLKAGFGGHGAGAAENSGLPTETTGFGGKLPSAGFGASSSNESAFGQQS 319 Query: 314 XXFGATST--FGQPSAPAFGATSTGAFGQQSTPALGATSTGA 433 FG + FG S+ +FG+ S FG S+ +G GA Sbjct: 320 KGFGGATKNGFGGDSSSSFGSGSKAGFGGTSSSGIGGQKPGA 361
>NUP54_DROME (Q9V6B9) Probable nucleoporin Nup54| Length = 610 Score = 34.7 bits (78), Expect = 0.11 Identities = 26/43 (60%), Positives = 28/43 (65%), Gaps = 3/43 (6%) Frame = +2 Query: 320 FGATSTFGQPSAPAFGA--TSTGAFG-QQSTPALGATSTGAFG 439 FG T+ QP APAFGA TST AFG Q +T A GA S AFG Sbjct: 28 FGGTAATSQP-APAFGAQATSTPAFGAQPATSAFGAGS--AFG 67 Score = 33.1 bits (74), Expect = 0.32 Identities = 42/154 (27%), Positives = 50/154 (32%), Gaps = 49/154 (31%) Frame = +2 Query: 125 QPAM--FGANNPFGQSSASP---------------------FGQTSTNPFGTQQG----- 220 QPA FGA + FG ++A+P FG +T GT G Sbjct: 54 QPATSAFGAGSAFGATAAAPAFGAATGTSAFGGSAFGSTPAFGAATTTTAGTGLGGGGFG 113 Query: 221 -------------FGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATSTFGQPSAPA 361 FG P+T+ P A F FG T+T SAPA Sbjct: 114 GFGAAPATSQAGLFGAPATSAAPP-AFSGFGQQAAASTAPASGFSGFGTTTT----SAPA 168 Query: 362 FGATST--------GAFGQQSTPALGATSTGAFG 439 FG T GAFG T T FG Sbjct: 169 FGGFGTSQSTGFGGGAFGSTFGKPANTTVTPGFG 202
>NU214_DROME (Q9W1X4) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (DNup214) Length = 1711 Score = 34.7 bits (78), Expect = 0.11 Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 15/109 (13%) Frame = +2 Query: 146 NNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFG 325 +NP G ASPFG + FG+ P + + F FG Sbjct: 1528 SNPVGSPQASPFGGGGNSIFGSPA--TAPPASGGSIFGGGSSSGGFGSFTQTTPAQGGFG 1585 Query: 326 -----------ATSTFGQPSAPAFGATSTGAFGQQ----STPALGATST 427 A + FG P AP T+ G FG + +PA GA+ T Sbjct: 1586 GGFGQGGGGSVAQTGFGSPQAPQQQTTTPGGFGAKPVFGGSPAFGASPT 1634 Score = 28.9 bits (63), Expect = 6.0 Identities = 27/106 (25%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTN-PFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXX 301 +P++FG G S S FG S + PFG+ FG +T Sbjct: 1454 KPSVFGQPAQAGDSGGSIFGGGSASTPFGSSSIFGGGNTQG------------------- 1494 Query: 302 XXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 G+TS FGQ A + A G + +G+ FG Sbjct: 1495 AVGAPAAGSTSIFGQKVFGQSSAAAPAAGGNIFSNPVGSPQASPFG 1540
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 34.3 bits (77), Expect = 0.14 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNPS 272 P P+GP A +PAP T P+HP+P+ Sbjct: 250 PAPAGPAPAGPAPAPETNAPNHPSPA 275
>ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 33.9 bits (76), Expect = 0.19 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = +3 Query: 165 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 H P G PTPS ++AL SP PTT +HP P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQP 357
>UBQL2_MOUSE (Q9QZM0) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 638 Score = 33.1 bits (74), Expect = 0.32 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 289 +P + A FG + + G +ST+ GT QPS T N NP+AP P Sbjct: 288 EPMLNAAQEQFGGNPFATVGSSSTSGEGT-----QPSRTENRDPLPNPWAPPPTTQTAAT 342 Query: 290 XXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPAL 412 G+ S+ +A A + STP + Sbjct: 343 TTTTTTTSSGSGSGSSSSSTTAGNTMAAANYVASIFSTPGM 383
>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I| Length = 1325 Score = 32.7 bits (73), Expect = 0.42 Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 11/111 (9%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQG---FGQPSTTNNNPFAPKPFXXXXXXXX 295 Q + FG N FGQ+++ G ++ G + FGQPST P +P Sbjct: 484 QSSAFG-NFKFGQATSFDKGLSTDASSGAKSNTPVFGQPSTFGQAPVFGQP--------- 533 Query: 296 XXXXXXXXFGATSTFGQPSAPAFGATSTGA--------FGQQSTPALGATS 424 FG FGQPSA + S G FG +P GA + Sbjct: 534 ------SAFGQAPVFGQPSAFGQSSFSFGTSNMNQKLDFGTFKSPLSGAAT 578
>ICEV_PSESX (O33479) Ice nucleation protein| Length = 1196 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 +G+ + G +S+ G ST G + G+G T N + Sbjct: 846 YGSTSTAGYASSLIAGYGSTQTAGYESTLTAGYGSTQTAQENSSLTTGYGSTSTAGFASS 905 Query: 305 XXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+T T G S +G+T T +G T G+T+T Sbjct: 906 LIAG-YGSTQTAGYKSTLTAGYGSTQTAEYGSSLTAGYGSTAT 947 Score = 31.2 bits (69), Expect = 1.2 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 6/105 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSA--SPFGQTSTNPFGTQ--QGFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ + G SS+ + +G T T +G+ G+G T N Sbjct: 748 AGYGSTSTAGYSSSLIAGYGSTQTAGYGSTLTTGYGSTQTAQEN---------------- 791 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+TST G S+ +G+T T + T G+T T Sbjct: 792 -SSLTTGYGSTSTAGYSSSLIAGYGSTQTAGYESTLTAGYGSTQT 835 Score = 28.5 bits (62), Expect = 7.9 Identities = 25/105 (23%), Positives = 35/105 (33%), Gaps = 6/105 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ G S+ G ST G G+G T + Sbjct: 300 AGYGSTGTAGSDSSLIAGYGSTQTSGGDSSLTAGYGSTQTAQEGSNLTSGYGSTGTAGAD 359 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+T T G SA +G+T T G T G+T T Sbjct: 360 SSLIAG-YGSTQTSGSDSALTAGYGSTQTAQEGSNLTAGYGSTGT 403
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 32.7 bits (73), Expect = 0.42 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 201 PSGPNRALASPAPPTTIPSHPNPS 272 PSGP A +PAP T P+HP+P+ Sbjct: 246 PSGPAPAGPAPAPETNAPNHPSPA 269
>ICEK_PSESX (O30611) Ice nucleation protein| Length = 1148 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 +G+ + G +S+ G ST G + G+G T N + Sbjct: 798 YGSTSTAGYASSLIAGYGSTQTAGYESTLTAGYGSTQTAQENSSLTTGYGSTSTAGFASS 857 Query: 305 XXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+T T G S +G+T T +G T G+T+T Sbjct: 858 LIAG-YGSTQTAGYKSTLTAGYGSTQTAEYGSSLTAGYGSTAT 899 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ + G SS+ G ST G + G+G T N Sbjct: 700 AGYGSTSTAGYSSSLIAGYGSTQTAGYESTLTAGYGSTQTAQEN---------------- 743 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+TST G S+ +G+T T + T G+T T Sbjct: 744 -SSLTTGYGSTSTAGYSSSLIAGYGSTQTAGYESTLTAGYGSTQT 787
>ICEN_PSESY (P06620) Ice nucleation protein| Length = 1200 Score = 32.7 bits (73), Expect = 0.42 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 +G+ + G +S+ G ST G + G+G T N + Sbjct: 850 YGSTSTAGYASSLIAGYGSTQTAGYESTLTAGYGSTQTAQENSSLTTGYGSTSTAGFASS 909 Query: 305 XXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+T T G S +G+T T +G T G+T+T Sbjct: 910 LISG-YGSTQTAGYKSTLTAGYGSTQTAEYGSSLTAGYGSTAT 951 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 6/105 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ + G SS+ G ST G + G+G T N Sbjct: 752 AGYGSTSTAGYSSSLIAGYGSTQTAGYESTLTAGYGSTQTAQEN---------------- 795 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+TST G S+ +G+T T + T G+T T Sbjct: 796 -SSLTTGYGSTSTAGYSSSLIAGYGSTQTAGYESTLTAGYGSTQT 839
>FGD1_MOUSE (P52734) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein homolog) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 960 Score = 32.3 bits (72), Expect = 0.55 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 Query: 192 QPTPSGPNRALASPAPPTTIPSHPNPS 272 +P P GP R + P PPT IP P PS Sbjct: 124 EPHPEGPQRLRSDPGPPTEIPG-PRPS 149
>UBQL1_HUMAN (Q9UMX0) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)| (PLIC-1) (hPLIC-1) Length = 589 Score = 32.3 bits (72), Expect = 0.55 Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 11/118 (9%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFG-QPSTTNN-----NPFAPKPFXXXXX 286 +P + A FG +PF +N T G G QPS T N NP+AP+ Sbjct: 281 EPMLSAAQEQFG---GNPFASLVSN---TSSGEGSQPSRTENRDPLPNPWAPQ------- 327 Query: 287 XXXXXXXXXXXFGATSTFGQPSAPAFGATSTGAFGQQST-----PALGATSTGAFGQQ 445 G ST G + G+T++G GQ +T P +GA+ G Q Sbjct: 328 ---TSQSSSASSGTASTVGGTT----GSTASGTSGQSTTAPNLVPGVGASMFNTPGMQ 378
>LRP2_HHV1F (P17589) Latency-related protein 2| Length = 107 Score = 32.0 bits (71), Expect = 0.71 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = +3 Query: 132 PCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 275 P + H SH P L R PTP+ P+ + A P P T P+HP+ A Sbjct: 6 PRTPTPTHPHSHAPPL--PRTPTPAHPH-SHAPPLPRTPTPTHPHSHA 50
>SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPR1| A) Length = 144 Score = 31.6 bits (70), Expect = 0.93 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PKAP P+A C PK P PK PKV Sbjct: 56 CHPKAPEPCHPKAPEPCNPKVPEPCQPKVPEPCQPKV 92 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+A C PKAP PK PKV Sbjct: 48 CNPKGPEPCHPKAPEPCHPKAPEPCNPKVPEPCQPKV 84 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/37 (40%), Positives = 16/37 (43%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PKAP P+ C PK P PK PKV Sbjct: 64 CHPKAPEPCNPKVPEPCQPKVPEPCQPKVPEPCNPKV 100 Score = 29.3 bits (64), Expect = 4.6 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKA 358 C PK P P+ C PKAP PKA Sbjct: 88 CQPKVPEPCNPKVPEPCQPKAPEPCHPKA 116 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/36 (38%), Positives = 15/36 (41%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPK 337 C PK P P+ C PK P PKA PK Sbjct: 80 CQPKVPEPCQPKVPEPCNPKVPEPCQPKAPEPCHPK 115
>LP61_EIMTE (P15714) Antigen LPMC-61 (Fragment)| Length = 255 Score = 31.6 bits (70), Expect = 0.93 Identities = 15/50 (30%), Positives = 28/50 (56%) Frame = -2 Query: 434 RRQWT*RQGPGWTAGQRRQLMWRQRPERMAGQRWR*RQKARWSLSAPQMQ 285 ++QW+ +Q Q++Q W ++PE+ Q+W +Q+ +WS Q Q Sbjct: 138 QQQWSEQQQ------QQQQQQWPEQPEQQQQQQWPEQQQQQWSDQNQQQQ 181 Score = 31.6 bits (70), Expect = 0.93 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -2 Query: 401 WTAGQRRQLMWRQRPERMAGQRWR*RQKARWSLSAPQMQ 285 W GQR+QL Q+ ++ Q + +Q+ +W PQMQ Sbjct: 49 WPEGQRQQLWPEQQQQQWPEQHQQAQQQQQWPQQQPQMQ 87
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 31.2 bits (69), Expect = 1.2 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 3/99 (3%) Frame = +2 Query: 146 NNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPK---PFXXXXXXXXXXXXXXX 316 + P S+ +P +++ F T G P+++ + P + P Sbjct: 606 STPLSNSTVAPTSTFTSSGFNTTSGL--PTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTS 663 Query: 317 XFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGA 433 T TFG S A G TG+ Q S + TSTG+ Sbjct: 664 SIIPTETFGSTSGSATGTRPTGSSSQGS--VVPTTSTGS 700
>ESAM_MACFA (Q95KI3) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +3 Query: 165 HLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 H P G PTPS ++AL SP PTT ++P P Sbjct: 323 HGPPRPGALTPTPSLSSQALPSPRLPTTDGANPQP 357
>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2| Length = 916 Score = 31.2 bits (69), Expect = 1.2 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQ-PSTTN-NNPFAPKP 268 F +N GQ ++P + NPF + QG GQ PS +N P P+P Sbjct: 162 FASNQGMGQRPSAP--RPGNNPFSSSQGMGQRPSPSNIPRPAPPRP 205
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = +2 Query: 164 SSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATSTFG 343 S+++ TST+P T ST++++ + ++ST Sbjct: 216 STSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTST 275 Query: 344 QPSAPAFGA--TSTGAFGQQSTPALGATS 424 PS+ + A TST ++ ++P+L ++S Sbjct: 276 SPSSKSTSASSTSTSSYSTSTSPSLTSSS 304 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/91 (17%), Positives = 34/91 (37%) Frame = +2 Query: 164 SSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGATSTFG 343 S+++ TST+ T ST+ ++ ++ST Sbjct: 202 STSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTST 261 Query: 344 QPSAPAFGATSTGAFGQQSTPALGATSTGAF 436 PS+ + ++ST + + +TST ++ Sbjct: 262 SPSSTSTSSSSTSTSPSSKSTSASSTSTSSY 292
>ICEA_PANAN (P20469) Ice nucleation protein inaA| Length = 1322 Score = 31.2 bits (69), Expect = 1.2 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 6/105 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSASP--FGQTSTNPFGTQ--QGFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ G+ S +G T T G+ G+G T ++ + Sbjct: 418 AGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAQKG 477 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+TST G S+ +G+T T +G T G+T T Sbjct: 478 SDLTAG-YGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQT 521 Score = 29.6 bits (65), Expect = 3.5 Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 10/105 (9%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGTQQ----------GFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 +G + + +G T T +G+ Q G+G ST N + Sbjct: 500 YGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSV 559 Query: 305 XXXXXFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 +G+T T + S G STG G S+ G ST G Sbjct: 560 LTAG-YGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTSTAG 603 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 +G+T T G S G STG G ST G ST G++ Sbjct: 180 YGSTETAGDSSTLIAGYGSTGTAGSDSTLVAGYGSTQTAGEE 221 Score = 29.3 bits (64), Expect = 4.6 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 4/100 (4%) Frame = +2 Query: 140 GANNPFGQSSASPFGQTSTNPFGTQ--QGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 313 G+ P + +G T + +Q G+G T ++ + Sbjct: 151 GSTQPTQTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGSDSTLVA 210 Query: 314 XXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+T T G+ S+ +G+T TG G T G+T T Sbjct: 211 G-YGSTQTAGEESSQMAGYGSTQTGMKGSDLTAGYGSTGT 249
>TMG4_HUMAN (Q9BZD6) Transmembrane gamma-carboxyglutamic acid protein 4| precursor (Proline-rich Gla protein 4) (Proline-rich gamma-carboxyglutamic acid protein 4) Length = 226 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 123 INQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPT 245 + PCS+ G H P+++ RR P A SP PP+ Sbjct: 146 LQHPCSSAVYERGRHTPSIIFRR------PEEAALSPLPPS 180
>RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70) Length = 616 Score = 30.8 bits (68), Expect = 1.6 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 7/79 (8%) Frame = +2 Query: 167 SASPFGQTSTNPFGTQQGFGQPSTTNNNPFA-------PKPFXXXXXXXXXXXXXXXXFG 325 SA G NP +G GQP P A P+P +G Sbjct: 104 SAEAVGVKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQP---QNGSSGMGSTVSKAYG 160 Query: 326 ATSTFGQPSAPAFGATSTG 382 A+ TFG+ + P+ TS G Sbjct: 161 ASKTFGKAAGPSLSHTSGG 179
>ENAH_HUMAN (Q8N8S7) Protein enabled homolog| Length = 591 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 105 AAAATTINQPCSALTIHSGSHLPALLGRRQP--TPSGPNRALASPAPPTTIPSHPNPSAA 278 AAA ++ P +++ S + P L QP TPS L APP P P P+ A Sbjct: 267 AAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQA 326
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 30.8 bits (68), Expect = 1.6 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +3 Query: 192 QPTPSGPNRALASPAPPTTIPS-HPNP 269 +P P GP R + P PPT PS P+P Sbjct: 124 EPHPEGPQRLRSDPGPPTETPSQRPSP 150
>SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein| Length = 975 Score = 30.8 bits (68), Expect = 1.6 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 438 PKAPVDVAPRAGVDCWPKAPVDVAPKAGADG 346 PK P +AP+ PK P VAPK G+ G Sbjct: 700 PKTPPPMAPKTPPPTTPKTPPPVAPKPGSRG 730
>TFE2_RAT (P21677) Transcription factor E2-alpha (Immunoglobulin| enhancer-binding factor E12/E47) (Transcription factor 3) (TCF-3) (Transcription regulator Pan) Length = 649 Score = 30.4 bits (67), Expect = 2.1 Identities = 18/56 (32%), Positives = 24/56 (42%) Frame = +3 Query: 111 AATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 278 A T + S T+ LP LG P P P+ +S T+ PS+P AA Sbjct: 108 AYATFGRDTSVGTLSQAGFLPGELGLSSPGPLSPSGVKSSSQYYTSFPSNPRRRAA 163
>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein| Eps15) (AF-1p protein) Length = 897 Score = 30.4 bits (67), Expect = 2.1 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPST---TNNNPFAP 262 F ++ F Q+S PF +ST+PF S +N+PFAP Sbjct: 653 FASDCFFKQTSTDPFTTSSTDPFSASSNSSNTSVETWKHNDPFAP 697
>NUP42_YEAST (P49686) Nucleoporin NUP42 (Nuclear pore protein NUP42)| Length = 430 Score = 30.4 bits (67), Expect = 2.1 Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 2/100 (2%) Frame = +2 Query: 131 AMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXX 310 AM +NPFG+S P FGQP+ N P Sbjct: 126 AMAATSNPFGKS-----------PGSMGSAFGQPAFGANKTAIPSSSVSNSNNSAFGAAS 174 Query: 311 XXXFGATSTFG--QPSAPAFGATSTGAFGQQSTPALGATS 424 TS FG Q +A ++++ AFG+ P GA + Sbjct: 175 NTPLTTTSPFGSLQQNASQNASSTSSAFGK---PTFGAAT 211 Score = 30.4 bits (67), Expect = 2.1 Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 3/105 (2%) Frame = +2 Query: 137 FGANNP-FGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 313 FG N G +S S FG TS FG P+ ++ P P Sbjct: 65 FGTNTGNTGNTSISAFGNTSNA--AKPSAFGAPAFGSSAPINVNPPST------------ 110 Query: 314 XXFGATSTFGQPSAPAFGATSTGAFGQQSTP--ALGATSTGAFGQ 442 TS FG AP+FG+T GA S P + AFGQ Sbjct: 111 -----TSAFG---APSFGSTGFGAMAATSNPFGKSPGSMGSAFGQ 147
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 30.4 bits (67), Expect = 2.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNP 269 P+P+ P+ A SPAPP+ P P P Sbjct: 46 PSPAPPSPAPPSPAPPSPAPPSPGP 70 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +3 Query: 171 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 PA P+P+ P+ A SPAPP+ P P P Sbjct: 86 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 118 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +3 Query: 171 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 PA P+P+ P+ A SPAPP+ P P P Sbjct: 81 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 113 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNP 269 P+P+ P+ A SPAPP+ P P P Sbjct: 79 PSPAPPSPAPPSPAPPSPAPPSPAP 103 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNP 269 P+P+ P+ A SPAPP+ P P P Sbjct: 41 PSPAPPSPAPPSPAPPSPAPPSPAP 65 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 108 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 A + N C I + PA P+P+ P+ A SPAPP+ P P P Sbjct: 22 AFVASANAQCVPGGIFNCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGPPSPAP 75 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +3 Query: 171 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 278 PA P+P+ P+ A SPAPP+ P P PS A Sbjct: 91 PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSP-PSPA 125
>GLTA_WHEAT (P10385) Glutenin, low molecular weight subunit precursor| Length = 356 Score = 30.4 bits (67), Expect = 2.1 Identities = 23/98 (23%), Positives = 28/98 (28%) Frame = +2 Query: 152 PFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXXFGAT 331 PF Q PF Q +PF QQ + PF+ +P Sbjct: 37 PFSQQQQPPFSQQQQSPFSQQQQQPPFAQQQQPPFSQQPPISQQ--------------QQ 82 Query: 332 STFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 F Q P F + QQ P F QQ Sbjct: 83 PPFSQQQQPQFSQQQQPPYSQQQQPPYSQQQQPPFSQQ 120
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 30.0 bits (66), Expect = 2.7 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNPS 272 P P+GP +PAP T P+HP+P+ Sbjct: 254 PAPAGP-----TPAPETNAPNHPSPA 274
>SEC9_DEBHA (Q6BKU3) Protein transport protein SEC9| Length = 490 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 8/46 (17%) Frame = +2 Query: 143 ANNPFGQSS--ASPFGQ------TSTNPFGTQQGFGQPSTTNNNPF 256 ANNP+G + AS G+ T TNP+G + G+ S + NP+ Sbjct: 111 ANNPYGNGNVGASSRGERAGGRNTQTNPYGGARASGRASGSKPNPY 156
>ICEN_ENTAG (P16239) Ice nucleation protein| Length = 1258 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSA--SPFGQTSTNPFGTQ--QGFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ + G S+ + +G T T +G+ G+G T N Sbjct: 482 AGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNE---------------- 525 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATSTGAFG 439 +G+TST G S+ +G+T T ++ T G+T T G Sbjct: 526 -SDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREG 573 Score = 29.6 bits (65), Expect = 3.5 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 6/107 (5%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXX 292 Q A +G+ + S G ST G G+G T + + Sbjct: 416 QTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQ 475 Query: 293 XXXXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+TST G S+ +G+T T +G T G+T T Sbjct: 476 KGSDLTAG-YGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQT 521 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 +G+T T G S G STG G ST G ST G++ Sbjct: 180 YGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEE 221
>UBAP1_RAT (Q5XIS7) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/40 (35%), Positives = 24/40 (60%) Frame = +3 Query: 138 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPS 257 SAL ++SG+ +PAL + P+ S + +PP+T P+ Sbjct: 322 SALNLNSGTEVPALTSSQMPSLSILSVCTEESSPPSTCPT 361
>ICEN_PANAN (Q47879) Ice nucleation protein inaU| Length = 1034 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSA--SPFGQTSTNPFGTQ--QGFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ + G S+ + +G T T +G+ G+G T N Sbjct: 482 AGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNE---------------- 525 Query: 299 XXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATSTGAFG 439 +G+TST G S+ +G+T T ++ T G+T T G Sbjct: 526 -SDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREG 573 Score = 29.6 bits (65), Expect = 3.5 Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 6/107 (5%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQ----GFGQPSTTNNNPFAPKPFXXXXXXX 292 Q A +G+ + S G ST G G+G T + + Sbjct: 416 QTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQ 475 Query: 293 XXXXXXXXXFGATSTFGQPSA--PAFGATSTGAFGQQSTPALGATST 427 +G+TST G S+ +G+T T +G T G+T T Sbjct: 476 KGSDLTAG-YGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQT 521 Score = 29.3 bits (64), Expect = 4.6 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Frame = +2 Query: 155 FGQSSASPFGQTSTNPFGTQQ----------GFGQPSTTNNNPFAPKPFXXXXXXXXXXX 304 +G + + +G T T +G+ Q G+G ST N + Sbjct: 500 YGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSV 559 Query: 305 XXXXXFGATSTF--GQPSAPAFGATSTGAFGQQSTPALGATSTGAF 436 +G+T T G +G+T T T G+TST + Sbjct: 560 LTAG-YGSTQTAREGSDLTAGYGSTQTAQENSDLTTGYGSTSTAGY 604 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFGQQ 445 +G+T T G S G STG G ST G ST G++ Sbjct: 180 YGSTETAGDSSTLIAGYGSTGTAGSDSTLVAGYGSTQTAGEE 221
>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)| Length = 244 Score = 29.6 bits (65), Expect = 3.5 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Frame = +3 Query: 162 SHLPALLGRRQPTPSGPNRA--LASPAPPTTIPSHPNPSAA 278 S P L +QP+P P + + SPA PTTIPS P++A Sbjct: 17 SQQPFLQQPQQPSPQ-PQQVVQIISPATPTTIPSAGKPTSA 56
>HEMH_PSEPK (Q88PV4) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 338 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -1 Query: 441 WPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKVEVAP 322 WP PV++A R G P DV + A G KV +AP Sbjct: 88 WPHGPVEIAMRYGQPALP----DVLARLAAQGVRKVTLAP 123
>SPRR1_RABIT (P35324) Cornifin alpha (Small proline-rich protein I) (SPR-I)| Length = 126 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 65 CQPKVPQPCQPKVPEPCQPKVPEPCQPKVPEPCQPKV 101 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 57 CQPKVPEPCQPKVPQPCQPKVPEPCQPKVPEPCQPKV 93 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 49 CQPKVPEPCQPKVPEPCQPKVPQPCQPKVPEPCQPKV 85 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 41 CQPKVPEPCQPKVPEPCQPKVPEPCQPKVPQPCQPKV 77
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 29.6 bits (65), Expect = 3.5 Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 6/107 (5%) Frame = +2 Query: 137 FGANNPFGQSSASPF-GQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXX 313 FGA ++++PF G N GT T + PFA Sbjct: 1109 FGAGQSGSTATSTPFTGGLGQNALGT--------TGQSTPFA--------FNVSSTTESK 1152 Query: 314 XXFG--ATSTFGQPSAPAFGATSTGA---FGQQSTPALGATSTGAFG 439 FG AT TFG + PA G ++G+ FG S PA G FG Sbjct: 1153 PVFGGTATPTFGL-NTPAPGVGTSGSSLSFGASSAPAQGFVGVAPFG 1198 Score = 28.5 bits (62), Expect = 7.9 Identities = 28/105 (26%), Positives = 36/105 (34%), Gaps = 13/105 (12%) Frame = +2 Query: 164 SSASPFGQTSTNPF--------GTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 319 SS+S FG T+ +PF FG T + F Sbjct: 1064 SSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTGAFSFGAGQSGSTATSTPF 1123 Query: 320 FG-----ATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 G A T GQ + AF +ST +S P G T+T FG Sbjct: 1124 TGGLGQNALGTTGQSTPFAFNVSST----TESKPVFGGTATPTFG 1164
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = +3 Query: 108 AAATTINQPCSALTIHSGSHLPALLGRRQPTPSG-PNRALASPAPPTTIPSHPNPSAA 278 ++A N P + TI + +P+ L P PS PN ++ASPA P + S+P+ + A Sbjct: 344 SSAGKTNPPVNP-TIKVTAAIPSPLQNTNPAPSTFPNPSVASPAFPNSSTSNPSTAPA 400
>SPR1A_RAT (Q63532) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPRR1)| Length = 152 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 64 CQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKV 100 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 56 CQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKV 92 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 48 CNPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKV 84
>CAP8_ARATH (Q8LBH2) Putative clathrin assembly protein At2g01600| Length = 571 Score = 29.6 bits (65), Expect = 3.5 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 15/58 (25%) Frame = +2 Query: 128 PAMFGANNPFGQSSAS---PFGQTSTNPFG------------TQQGFGQPSTTNNNPF 256 P F +++PF S+ + P Q NPFG T Q P T N+NPF Sbjct: 476 PNPFASHDPFASSNGTAPPPQQQAVNNPFGAYQQTYQHQPQPTYQHQSNPPTNNSNPF 533
>SPRR1_PIG (P35323) Cornifin (Small proline-rich protein I) (SPR-I) (Small| proline-rich squamous cell marker) (SPRP) Length = 97 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = -1 Query: 444 CWPKAPVDVAPRAGVDCWPKAPVDVAPKAGADGWPKV 334 C PK P P+ C PK P PK PKV Sbjct: 41 CHPKVPEPCQPKVPEPCQPKVPEPCHPKVPEPCQPKV 77
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 29.3 bits (64), Expect = 4.6 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPS---HPNPSAA 278 P P GP A AS APPT P P P++A Sbjct: 37 PPPPGPGAASASAAPPTASPGPERKPPPASA 67
>UBQL2_HUMAN (Q9UHD9) Ubiquilin-2 (Protein linking IAP with cytoskeleton 2)| (PLIC-2) (hPLIC-2) (Ubiquitin-like product Chap1/Dsk2) (DSK2 homolog) (Chap1) Length = 624 Score = 29.3 bits (64), Expect = 4.6 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 5/76 (6%) Frame = +2 Query: 125 QPAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNN-----NPFAPKPFXXXXXX 289 +P + A FG + + G +S++ GTQ PS T N NP+AP P Sbjct: 277 EPMLNAAQEQFGGNPFASVGSSSSSGEGTQ-----PSRTENRDPLPNPWAPPPATQSSAT 331 Query: 290 XXXXXXXXXXFGATST 337 G +S+ Sbjct: 332 TSTTTSTGSGSGNSSS 347
>NUPL1_RAT (P70581) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 585 Score = 29.3 bits (64), Expect = 4.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +2 Query: 323 GATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 G+ +FG S P+ G + G G +TPA +TS FG Sbjct: 25 GSGFSFGASSTPSVGL-NFGTLGSSATPASTSTSASGFG 62
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 4.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNP 269 P P+GP A P P ++ PS PNP Sbjct: 1722 PMPAGPPSAPPPPLPASSAPSVPNP 1746
>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor| (Salivary protein MSG1) Length = 147 Score = 29.3 bits (64), Expect = 4.6 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Frame = +3 Query: 180 LGRRQPTPSGPNRALASPAPP-TTIPSHPNP 269 +GR P P GP P PP +P HP P Sbjct: 58 IGRPPPPPFGPGIGRPPPPPPCPPVPPHPRP 88
>NU145_YEAST (P49687) Nucleoporin NUP145 precursor (EC 3.4.21.-) (Nuclear pore| protein NUP145) [Contains: Nucleoporin NUP145N (N-NUP145); Nucleoporin NUP145C (C-NUP145)] Length = 1317 Score = 29.3 bits (64), Expect = 4.6 Identities = 31/118 (26%), Positives = 39/118 (33%), Gaps = 20/118 (16%) Frame = +2 Query: 146 NNPFGQSSASPFGQTSTNPFGTQQGFGQPST-----------TNNNPFAPKPFXXXXXXX 292 + P SS+ F Q ST FG ST +N N + +P Sbjct: 22 STPAQPSSSLQFPQKSTGLFGNVNVNANTSTPSPSGGLFNANSNANSISQQPANNSLFGN 81 Query: 293 XXXXXXXXXFGAT---------STFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 FGAT S FG +A A STG F + A + G FG Sbjct: 82 KPAQPSGGLFGATNNTTSKSAGSLFGNNNATANSTGSTGLFSGSNNIASSTQNGGLFG 139
>TNFL6_PIG (Q9BEA8) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily m Length = 282 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 168 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 +P G+R+P P P P PPT +PS P P Sbjct: 36 VPGRPGQRRPPPPPP----PPPPPPTLLPSRPLP 65
>UBAP1_HUMAN (Q9NZ09) Ubiquitin-associated protein 1 (UBAP)| Length = 502 Score = 29.3 bits (64), Expect = 4.6 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +3 Query: 138 SALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 272 SAL + SG+ +PAL + P+ S + +PP T P+ P+ Sbjct: 322 SALNLDSGTEMPALTSSQMPSLSVLSVCTEESSPPNTGPTVTPPN 366
>NUPL1_HUMAN (Q9BVL2) Nucleoporin p58/p45 (Nucleoporin-like 1)| Length = 599 Score = 28.9 bits (63), Expect = 6.0 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Frame = +2 Query: 152 PFGQS-----SASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXX 316 PFG +S G ++ FGT GFG STT + F Sbjct: 491 PFGSGIGTGLQSSGLGSSNLGGFGTSSGFG-CSTTGASTFG------------------- 530 Query: 317 XFGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 FG T+ + FG++ST F S P + A++ FG Sbjct: 531 -FGTTNKPSGSLSAGFGSSSTSGF-NFSNPGITASAGLTFG 569
>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (p70) Length = 616 Score = 28.9 bits (63), Expect = 6.0 Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 7/79 (8%) Frame = +2 Query: 167 SASPFGQTSTNPFGTQQGFGQPSTTNNNPFA-------PKPFXXXXXXXXXXXXXXXXFG 325 SA G NP +G GQP P A P+P +G Sbjct: 104 SAEVVGVKIGNPVPYNEGLGQPQVAPPAPAASPAASSRPQP---QNGTSGAGSTVSKAYG 160 Query: 326 ATSTFGQPSAPAFGATSTG 382 A+ TFG+ + P+ S G Sbjct: 161 ASKTFGKAAGPSLSHNSGG 179
>ICEN_PSEFL (P09815) Ice nucleation protein| Length = 1210 Score = 28.9 bits (63), Expect = 6.0 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 6/105 (5%) Frame = +2 Query: 131 AMFGANNPFGQSSA--SPFGQTSTNPFGTQ--QGFGQPSTTNNNPFAPKPFXXXXXXXXX 298 A +G+ G S+ + +G T T G+ G+G T ++ + Sbjct: 565 AGYGSTQTAGGDSSLTAGYGSTQTAQMGSNLTAGYGSTGTAGSDSSLIAGYGSTQTAGGD 624 Query: 299 XXXXXXXFGATSTFGQPS--APAFGATSTGAFGQQSTPALGATST 427 +G+T T G S +G+T T G T G+TST Sbjct: 625 SSLTAG-YGSTQTAGHGSILTAGYGSTQTAQEGSSLTAGYGSTST 668 Score = 28.9 bits (63), Expect = 6.0 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +2 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGAFG 439 +G+T T G S G STG G S+ G STG G Sbjct: 183 YGSTETAGDSSTLIAGYGSTGTSGSDSSIIAGYGSTGTAG 222
>EP15R_MOUSE (Q60902) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) (Epidermal growth factor receptor pathway substrate 15-related sequence) (Eps15-rs) Length = 907 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 176 PFGQTSTNPFGTQQGFGQPSTTNNNPFAP 262 P G S PF ++GFG P + +PFAP Sbjct: 814 PLGADSGEPFQNKKGFGDP-FSGKDPFAP 841 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 137 FGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFA 259 F +++PF SS S G ++PFGT FG S ++ FA Sbjct: 703 FESSDPFSSSSISSKG---SDPFGTLDPFGSSSFSSAEGFA 740
>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 487 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/33 (39%), Positives = 14/33 (42%) Frame = +3 Query: 171 PALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 P + P PS P S APP PS P P Sbjct: 272 PPSQNSKPPVPSTPRPGAGSQAPPPPPPSRPGP 304
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1| (Eps15-related protein) (Eps15R) Length = 864 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 Query: 143 ANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAP 262 A+ P P G S +PF +++GFG P + +PF P Sbjct: 805 ADFPEAPDPFQPLGADSGDPFQSKKGFGDP-FSGKDPFVP 843
>TNFL6_HUMAN (P48023) Tumor necrosis factor ligand superfamily member 6 (Fas| antigen ligand) (Fas ligand) (CD178 antigen) (CD95L protein) (Apoptosis antigen ligand) (APTL) [Contains: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor Length = 281 Score = 28.9 bits (63), Expect = 6.0 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +3 Query: 168 LPALLGRRQPTPSGPNRALASPAPPTTIPSHPNP 269 +P G+R+P P P L P PP +P P P Sbjct: 36 VPRRPGQRRPPPPPPPPPLPPPPPPPPLPPLPLP 69
>AMPH_CHICK (P50478) Amphiphysin| Length = 682 Score = 28.9 bits (63), Expect = 6.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNPSAA 278 P+ SGP R +P+PP + P+P+A+ Sbjct: 249 PSDSGPLRIAKTPSPPEEVSPLPSPTAS 276
>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein| 1) (NDPP-1) Length = 802 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/26 (53%), Positives = 14/26 (53%) Frame = +3 Query: 195 PTPSGPNRALASPAPPTTIPSHPNPS 272 P PSGP A A P PP P P PS Sbjct: 550 PLPSGPAYASALPPPPGPPPPPPLPS 575
>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 762 Score = 28.9 bits (63), Expect = 6.0 Identities = 23/93 (24%), Positives = 31/93 (33%) Frame = +2 Query: 128 PAMFGANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXX 307 P GA NP Q+S S + + T Q NNN P+P Sbjct: 611 PGFGGARNPALQTSLSSLSSSMSRAPRTSSSSLQADQANNNAPGPRP-------GSGSHR 663 Query: 308 XXXXFGATSTFGQPSAPAFGATSTGAFGQQSTP 406 G S G P +P++ + AF P Sbjct: 664 SPARQGLPSPPGTPRSPSYTGSKAVAFIHTDLP 696
>YETS2_HUMAN (Q9ULM3) YEATS domain-containing protein 2| Length = 1422 Score = 28.5 bits (62), Expect = 7.9 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +3 Query: 156 SGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPS 272 S S PA+L PTP P+ A A+ A T P P PS Sbjct: 1081 STSKPPAILPVAAPTPVVPSSAPAAVAKVKTEPETPGPS 1119
>NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2| Length = 414 Score = 28.5 bits (62), Expect = 7.9 Identities = 40/125 (32%), Positives = 47/125 (37%), Gaps = 21/125 (16%) Frame = +2 Query: 128 PAMFGANNPFGQ----SSASPFGQTSTNPFG---TQQ--GFG-----QPSTTNNNPFAPK 265 PA FG FG SS F Q+ T+ FG TQQ GFG QPS+ NP Sbjct: 230 PAGFGGAG-FGSGPQSSSTFSFAQSKTD-FGASNTQQASGFGSSAFAQPSSGFGNPAPSA 287 Query: 266 PFXXXXXXXXXXXXXXXXFGA-------TSTFGQPSAPAFGATSTGAFGQQSTPALGATS 424 FG+ T+T GQ S G S+ FG S G S Sbjct: 288 ASFSFAAADSESKPSAGGFGSASGFSFKTATAGQGSGFGSGFGSSSGFGSSS----GFGS 343 Query: 425 TGAFG 439 + FG Sbjct: 344 SSGFG 348
>GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase 1) (Cellulase 1) (EG 1) Length = 393 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/98 (22%), Positives = 36/98 (36%) Frame = +2 Query: 140 GANNPFGQSSASPFGQTSTNPFGTQQGFGQPSTTNNNPFAPKPFXXXXXXXXXXXXXXXX 319 G+ + G + AS G + G +G+GQPS N+ + Sbjct: 283 GSGDASGGADASGAGGAAEGSQGQPEGYGQPSGGNDQGSSNGDATTGAGSGSGSDSGSTA 342 Query: 320 FGATSTFGQPSAPAFGATSTGAFGQQSTPALGATSTGA 433 G+ S GA ++G+ G P G ++ GA Sbjct: 343 NGSGS----------GAPTSGSDGSAVAPPSGGSNPGA 370
>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag| polyprotein) [Contains: Matrix protein; Capsid protein] Length = 469 Score = 28.5 bits (62), Expect = 7.9 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = +3 Query: 114 ATTINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 278 ++ +++P AL + LPA L P SGP A P PPT S NP A+ Sbjct: 118 SSPLSEPPEALALPP---LPAALPPPYPGSSGPTPT-APPLPPTPPSSPANPPAS 168
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Frame = +3 Query: 156 SGSHLPALLGRRQPTPSG--PNRALASPAPPTTIPSHPNPS 272 S HLP +G P P+R P P PSHP PS Sbjct: 81 SHGHLPPSVGGPPPHRGHLPPSRGFNPPPSPVISPSHPPPS 121
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 28.5 bits (62), Expect = 7.9 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +3 Query: 174 ALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSAA 278 AL P GP R+ S A P + P PSAA Sbjct: 152 ALAAAEAGAPGGPGRSSPSAASPASSSGSPGPSAA 186
>ITB4_RAT (Q64632) Integrin beta-4 precursor (GP150) (CD104 antigen)| Length = 1807 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 6/34 (17%) Frame = +2 Query: 341 GQPSAPAFGATSTGAFGQQSTP------ALGATS 424 GQ +AP++G S GA G TP ALG TS Sbjct: 1494 GQSAAPSWGTDSRGAMGVPDTPTRLVFSALGPTS 1527
>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau| kinase) Length = 1321 Score = 28.5 bits (62), Expect = 7.9 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +3 Query: 120 TINQPCSALTIHSGSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHP 263 T P HS H RR+ P+GP R + S APP + P Sbjct: 629 TSQPPTPGSPSHSPLHSGPRPRRRESDPTGPQRQVFSVAPPFEVNGLP 676
>STF1_HORSE (Q9GKL2) Steroidogenic factor 1 (STF-1) (SF-1)| Length = 461 Score = 28.5 bits (62), Expect = 7.9 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +3 Query: 159 GSHLPALLGRRQPTPSGPNRALASPAPPTTIPSHPNPSA 275 G H+P G P+GP +PA P +PS P A Sbjct: 143 GLHVPEPKGLASGPPAGPLGDFGAPALPMAVPSTNGPLA 181 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,432,322 Number of Sequences: 219361 Number of extensions: 1009531 Number of successful extensions: 5937 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 4474 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5684 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
