ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NOMO3_HUMAN (P69849) Nodal modulator 3 precursor (pM5 protein 3) 38 0.006
2NOMO1_HUMAN (Q15155) Nodal modulator 1 precursor (pM5) 38 0.006
3NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2) 38 0.006

>NOMO3_HUMAN (P69849) Nodal modulator 3 precursor (pM5 protein 3)|
          Length = 1222

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = +2

Query: 113 DEIDGCGGFVEASSGLAKSRRASESKFDYSDITVELCTVDGLVKESTQCAPNGYY 277
           D + GCGGFV+           S+ + +YS I ++L T  G +K  T CAPN  Y
Sbjct: 34  DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGY 77



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>NOMO1_HUMAN (Q15155) Nodal modulator 1 precursor (pM5)|
          Length = 1222

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = +2

Query: 113 DEIDGCGGFVEASSGLAKSRRASESKFDYSDITVELCTVDGLVKESTQCAPNGYY 277
           D + GCGGFV+           S+ + +YS I ++L T  G +K  T CAPN  Y
Sbjct: 34  DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGY 77



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>NOMO2_HUMAN (Q5JPE7) Nodal modulator 2 precursor (pM5 protein 2)|
          Length = 1267

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/55 (38%), Positives = 29/55 (52%)
 Frame = +2

Query: 113 DEIDGCGGFVEASSGLAKSRRASESKFDYSDITVELCTVDGLVKESTQCAPNGYY 277
           D + GCGGFV+           S+ + +YS I ++L T  G +K  T CAPN  Y
Sbjct: 34  DIVVGCGGFVK-----------SDVEINYSLIEIKLYTKHGTLKYQTDCAPNNGY 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,851,954
Number of Sequences: 219361
Number of extensions: 316788
Number of successful extensions: 679
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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