ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
3dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
4dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
5dbj|AB232385.1| Oryza sativa (japonica cultivar-group) OsFAD7-2 ... 52 0.002
6ref|XM_479304.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.095
7gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.095
8dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic D... 46 0.095
9dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.095
10dbj|AK058442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.095
11gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.37
12gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 44 0.37
13gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 44 0.37
14gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, comple... 44 0.37
15gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 42 1.5
16emb|X13057.1|GGP53 Chicken mRNA for nuclear oncoprotein p53 42 1.5
17emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in... 42 1.5
18dbj|AB168333.1| Macaca fascicularis testis cDNA clone: QtsA-1129... 42 1.5
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.5
22dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
23dbj|AK070276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
24dbj|AK068689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
25gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 1.5
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
27emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
28emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.5
29emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, co... 42 1.5
30ref|NM_205264.1| Gallus gallus tumor protein p53 (TP53), mRNA 42 1.5
31ref|NM_105562.1| Arabidopsis thaliana DNA binding / transcriptio... 40 5.8
32ref|XM_513433.1| PREDICTED: Pan troglodytes similar to phosphati... 40 5.8
33ref|NM_026502.1| Mus musculus RIKEN cDNA 1110004E09 gene (111000... 40 5.8
34gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.8
35gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome... 40 5.8
36gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome... 40 5.8
37gb|AC102409.10| Mus musculus chromosome 18, clone RP24-365B20, c... 40 5.8
38emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on ch... 40 5.8
39emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on ch... 40 5.8
40emb|AL358215.16| Human DNA sequence from clone RP11-470L19 on ch... 40 5.8
41gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome... 40 5.8
42gb|BC019533.1| Mus musculus RIKEN cDNA 1110004E09 gene, mRNA (cD... 40 5.8
43gb|AC008556.5| Homo sapiens chromosome 19 clone CTC-526N19, comp... 40 5.8
44dbj|AK127884.1| Homo sapiens cDNA FLJ45990 fis, clone RECTM2001519 40 5.8
45gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, com... 40 5.8
46gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, com... 40 5.8
47gb|BT024817.1| Arabidopsis thaliana At1g68880 gene, complete cds 40 5.8
48gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Ca... 40 5.8
49gb|S73809.1| xylose isomerase [Streptomyces diastaticus, No. 7 M... 40 5.8
50dbj|AK003413.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 5.8
51gb|AF400621.1|AF400621 Arabidopsis thaliana transcription factor... 40 5.8
52dbj|AK045905.1| Mus musculus adult male corpora quadrigemina cDN... 40 5.8
53gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-42... 40 5.8
54gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.8
55dbj|AK018510.1| Mus musculus adult male colon cDNA, RIKEN full-l... 40 5.8
56gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.8
57gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate h... 40 5.8
58dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
59emb|BX816829.1|CNS0AE0Q Arabidopsis thaliana Full-length cDNA Co... 40 5.8
60gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 40 5.8
61gb|AC116173.3| Homo sapiens BAC clone RP11-68E11 from 4, complet... 40 5.8
62gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complet... 40 5.8
63gb|AC011914.9|AC011914 Arabidopsis thaliana chromosome 1 BAC F14... 40 5.8
64gb|AC011665.8|AC011665 Arabidopsis thaliana chromosome 1 BAC T6L... 40 5.8
65gb|AC078843.2|AC078843 Homo sapiens chromosome 7 clone RP11-59F6... 40 5.8
66gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, comple... 40 5.8
67gb|AC008997.5|AC008997 Homo sapiens chromosome 19 clone LLNLR-25... 40 5.8
68dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.8
69emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 5.8
70gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, com... 40 5.8
71gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosom... 40 5.8
72gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
73gb|AF019907.1|AF019907 Vitis vinifera glutathione reductase (NAD... 40 5.8
74emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 5.8
75gb|AC115008.7| Mus musculus chromosome 3, clone RP24-189F12, com... 40 5.8
76gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosom... 40 5.8
77emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chro... 40 5.8
78emb|AL831790.3| Mouse DNA sequence from clone RP23-334I5 on chro... 40 5.8 
>dbj|AK065493.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M10, full
           insert sequence
          Length = 4113

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 91/106 (85%)
 Strand = Plus / Plus

                                                                       
Query: 217 ccgctccacgagctcgtcccccgcctcgccgagctccgcgccgacgaggccggccccgtg 276
           ||||||| |||  ||||| ||||| ||||||| ||||  |||||  ||||| ||||||| 
Sbjct: 200 ccgctcctcgacttcgtcgcccgcatcgccgacctccatgccgatcaggccagccccgtc 259

                                                         
Query: 277 cgcaagctcgtcgccgagatgattggtgagatcgggtcaaagcaca 322
           |||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 260 cgcaagctcgtcgccgagatgattggtgaggttgggtcaaaacaca 305
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                            
Query: 217      ccgctccacgagctcgtcccccgcctcgccgagctccgcgccgacgaggccggccccgtg 276
                ||||||| |||  ||||| ||||| ||||||| ||||  |||||  ||||| ||||||| 
Sbjct: 29481089 ccgctcctcgacttcgtcgcccgcatcgccgacctccatgccgatcaggccagccccgtc 29481148

                                  
Query: 277      cgcaagctcgtcgccgag 294
                ||||||||||||||||||
Sbjct: 29481149 cgcaagctcgtcgccgag 29481166



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 237      ccgcctcgccgagctccgcgccg 259
                |||||||||||||||||||||||
Sbjct: 26674455 ccgcctcgccgagctccgcgccg 26674433
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>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0627E10
          Length = 163388

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                        
Query: 217  ccgctccacgagctcgtcccccgcctcgccgagctccgcgccgacgaggccggccccgtg 276
            ||||||| |||  ||||| ||||| ||||||| ||||  |||||  ||||| ||||||| 
Sbjct: 7761 ccgctcctcgacttcgtcgcccgcatcgccgacctccatgccgatcaggccagccccgtc 7820

                              
Query: 277  cgcaagctcgtcgccgag 294
            ||||||||||||||||||
Sbjct: 7821 cgcaagctcgtcgccgag 7838
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0034A04
          Length = 151263

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                          
Query: 217    ccgctccacgagctcgtcccccgcctcgccgagctccgcgccgacgaggccggccccgtg 276
              ||||||| |||  ||||| ||||| ||||||| ||||  |||||  ||||| ||||||| 
Sbjct: 144011 ccgctcctcgacttcgtcgcccgcatcgccgacctccatgccgatcaggccagccccgtc 144070

                                
Query: 277    cgcaagctcgtcgccgag 294
              ||||||||||||||||||
Sbjct: 144071 cgcaagctcgtcgccgag 144088
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>dbj|AB232385.1| Oryza sativa (japonica cultivar-group) OsFAD7-2 gene for plastid
            omega-3 fatty acid desaturase, complete cds
          Length = 5326

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 217  ccgctccacgagctcgtcccccgcctcgccgagctccgcgccgacgaggccggccccgtg 276
            ||||||| |||  ||||| ||||| ||||||| ||||  |||||  ||||| ||||||| 
Sbjct: 5207 ccgctcctcgacttcgtcgcccgcatcgccgacctccatgccgatcaggccagccccgtc 5266

                          
Query: 277  cgcaagctcgtcgc 290
            ||||||||||||||
Sbjct: 5267 cgcaagctcgtcgc 5280
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>ref|XM_479304.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1283

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 237 ccgcctcgccgagctccgcgccg 259
           |||||||||||||||||||||||
Sbjct: 886 ccgcctcgccgagctccgcgccg 908
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 241     ctcgccgagctccgcgccgacgaggcc 267
               ||||||| |||||||||||||||||||
Sbjct: 3190277 ctcgccgcgctccgcgccgacgaggcc 3190251



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 199     cgcgggctccgccgcctgccgctcc 223
               ||||||||||| |||||||||||||
Sbjct: 1110773 cgcgggctccggcgcctgccgctcc 1110749
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>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_C06
          Length = 143168

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 237   ccgcctcgccgagctccgcgccg 259
             |||||||||||||||||||||||
Sbjct: 21312 ccgcctcgccgagctccgcgccg 21290
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524G08
          Length = 146690

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 237   ccgcctcgccgagctccgcgccg 259
             |||||||||||||||||||||||
Sbjct: 92059 ccgcctcgccgagctccgcgccg 92037
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>dbj|AK058442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G02, full
           insert sequence
          Length = 1283

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 237 ccgcctcgccgagctccgcgccg 259
           |||||||||||||||||||||||
Sbjct: 886 ccgcctcgccgagctccgcgccg 908
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 258     cgacgaggccggccccgtgcgcaagc 283
               ||||||||||||| ||||||||||||
Sbjct: 1749213 cgacgaggccggcaccgtgcgcaagc 1749238
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 179    gcccgcgcctcctgcaggtgcgcgggctcc 208
              |||||| | |||||||||||||||||||||
Sbjct: 320266 gcccgcccatcctgcaggtgcgcgggctcc 320295
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 189     cctgcaggtgcgcgggctccgc 210
               ||||||||||||||||||||||
Sbjct: 1953418 cctgcaggtgcgcgggctccgc 1953439
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>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence
          Length = 198130

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 129   cctccctccccacggcctcccc 150
             ||||||||||||||||||||||
Sbjct: 95802 cctccctccccacggcctcccc 95823
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 273    cgtgcgcaagctcgtcgccga 293
              |||||||||||||||||||||
Sbjct: 934691 cgtgcgcaagctcgtcgccga 934711
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>emb|X13057.1|GGP53 Chicken mRNA for nuclear oncoprotein p53
          Length = 1555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 189  cctgcaggtgcgcgggctccgccgc 213
            ||||||||||||||||| |||||||
Sbjct: 999  cctgcaggtgcgcgggcgccgccgc 1023
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>emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in linkage group 1,
              complete sequence
          Length = 185075

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      gcaagaaacagaaaaaggttt 23
              |||||||||||||||||||||
Sbjct: 119759 gcaagaaacagaaaaaggttt 119779
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>dbj|AB168333.1| Macaca fascicularis testis cDNA clone: QtsA-11290, similar to human
           testes development-related NYD-SP21 (NYD-SP21), mRNA,
           RefSeq: NM_032597.2
          Length = 2933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 348 ctctctgctggatcttctgaa 368
           |||||||||||||||||||||
Sbjct: 190 ctctctgctggatcttctgaa 210
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 240     cctcgccgagctccgcgccgacgag 264
               ||||||||||||| |||||||||||
Sbjct: 2643691 cctcgccgagctcggcgccgacgag 2643715
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 73       ggggatcgccggagctagggttccg 97
                |||| ||||||||||||||||||||
Sbjct: 19892598 ggggctcgccggagctagggttccg 19892622
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 275     tgcgcaagctcgtcgccgaga 295
               |||||||||||||||||||||
Sbjct: 1792447 tgcgcaagctcgtcgccgaga 1792427
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>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0508B05
          Length = 166165

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    ggggatcgccggagctagggttccg 97
             |||| ||||||||||||||||||||
Sbjct: 70199 ggggctcgccggagctagggttccg 70223
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>dbj|AK070276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047P18, full
           insert sequence
          Length = 1256

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 240 cctcgccgagctccgcgccgacgag 264
           ||||||||||||| |||||||||||
Sbjct: 583 cctcgccgagctcggcgccgacgag 607
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>dbj|AK068689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161I16, full
           insert sequence
          Length = 2349

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 73  ggggatcgccggagctagggttccg 97
           |||| ||||||||||||||||||||
Sbjct: 105 ggggctcgccggagctagggttccg 81
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 185     gcctcctgcaggtgcgcgggc 205
               |||||||||||||||||||||
Sbjct: 1472612 gcctcctgcaggtgcgcgggc 1472592
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 240     cctcgccgagctccgcgccgacgag 264
               ||||||||||||| |||||||||||
Sbjct: 2643635 cctcgccgagctcggcgccgacgag 2643659
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>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136490

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 240   cctcgccgagctccgcgccgacgag 264
             ||||||||||||| |||||||||||
Sbjct: 24318 cctcgccgagctcggcgccgacgag 24294
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>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 240   cctcgccgagctccgcgccgacgag 264
             ||||||||||||| |||||||||||
Sbjct: 12617 cctcgccgagctcggcgccgacgag 12641
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>emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, complete sequence
          Length = 216608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      gcaagaaacagaaaaaggttt 23
              |||||||||||||||||||||
Sbjct: 179478 gcaagaaacagaaaaaggttt 179498
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>ref|NM_205264.1| Gallus gallus tumor protein p53 (TP53), mRNA
          Length = 1555

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 189  cctgcaggtgcgcgggctccgccgc 213
            ||||||||||||||||| |||||||
Sbjct: 999  cctgcaggtgcgcgggcgccgccgc 1023
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>ref|NM_105562.1| Arabidopsis thaliana DNA binding / transcription factor AT1G68880
           mRNA, complete cds
          Length = 417

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 agatgattggtgagatcggg 312
           ||||||||||||||||||||
Sbjct: 350 agatgattggtgagatcggg 369
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>ref|XM_513433.1| PREDICTED: Pan troglodytes similar to phosphatidic acid phosphatase
           type 2B; phosphatidic acid phosphohydrolase; type-2
           phosphatidic acid phosphatase-beta; vascular endothelial
           growth factor and type I collagen inducible (LOC456884),
           mRNA
          Length = 1930

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 204 gctccgccgcctgccgctcc 223
           ||||||||||||||||||||
Sbjct: 258 gctccgccgcctgccgctcc 277
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>ref|NM_026502.1| Mus musculus RIKEN cDNA 1110004E09 gene (1110004E09Rik), mRNA
          Length = 1139

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 tgccctctctgctggatctt 363
           ||||||||||||||||||||
Sbjct: 767 tgccctctctgctggatctt 748
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 240     cctcgccgagctccgcgccgacgaggccggcc 271
               |||||||| | ||||||||||| |||||||||
Sbjct: 3458651 cctcgccgcgatccgcgccgaccaggccggcc 3458620
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>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence
          Length = 214712

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 326    tgtttatacccgacatgatgccctctct 353
              |||||||| || ||||||||||||||||
Sbjct: 177277 tgtttatatcccacatgatgccctctct 177304
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>gb|AC127262.3| Mus musculus BAC clone RP24-326H8 from chromosome 9, complete sequence
          Length = 181862

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ccctcccgccagccctccctcccc 139
             ||||||| ||||||||||||||||
Sbjct: 42400 ccctccctccagccctccctcccc 42423
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>gb|AC102409.10| Mus musculus chromosome 18, clone RP24-365B20, complete sequence
          Length = 137137

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   gccctcccgccagccctccctccc 138
             ||||||||||| ||||||||||||
Sbjct: 67315 gccctcccgccggccctccctccc 67338
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>emb|Z95116.1|HS57G9 Human DNA sequence from clone CTA-57G9 on chromosome 22q12.1, complete
             sequence
          Length = 113872

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aaacagaaaaaggttttaag 27
             ||||||||||||||||||||
Sbjct: 57963 aaacagaaaaaggttttaag 57982
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>emb|AL451085.20| Human DNA sequence from clone RP11-307C12 on chromosome 1 Contains the
              PMVK gene for phosphomevalonate kinase, the PBXIP1 gene for
              pre-B-cell leukemia transcription factor interacting
              protein 1, the gene for pygopus 2 (PYGO2), the  SHC1 gene
              for SHC (Src homology 2 domain containing) transforming
              protein 1, the CKS1B gene for CDC28 protein kinase
              regulatory subunit 1B, the gene for FAD-synthetase (PP591),
              the LENEP gene for lens epithelial protein, the ZFP67 gene
              for zinc finger protein 67 homolog (mouse), the gene for a
              novel protein (FLJ32934), a novel gene, the gene for a
              novel protein (FLJ32785) the 5' end of the ADAM15 gene for
              a disintegrin and metalloproteinase domain 15 (metargidin),
              and two CpG islands, complete sequence
          Length = 182166

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    agccctccctccccacggcc 145
              ||||||||||||||||||||
Sbjct: 145845 agccctccctccccacggcc 145864
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>emb|AL358215.16| Human DNA sequence from clone RP11-470L19 on chromosome 1 Contains the
             3' end of the PROK1 gene for Prokineticin 1, a putatative
             novel transcript, an unprocessed pseudogene, a novel
             transcript and the LOC395116 gene for the shaker subfamily
             potassium channel KCNA10, complete sequence
          Length = 101529

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aagcaagaaacagaaaaagg 20
             ||||||||||||||||||||
Sbjct: 53691 aagcaagaaacagaaaaagg 53672
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>gb|AC154776.2| Mus musculus BAC clone RP23-101N7 from chromosome 14, complete sequence
          Length = 215871

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    cagaaaaaggttttaagaggggga 34
             |||||||||| |||||||||||||
Sbjct: 51425 cagaaaaagggtttaagaggggga 51448
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>gb|BC019533.1| Mus musculus RIKEN cDNA 1110004E09 gene, mRNA (cDNA clone MGC:28517
           IMAGE:4191729), complete cds
          Length = 1139

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 tgccctctctgctggatctt 363
           ||||||||||||||||||||
Sbjct: 767 tgccctctctgctggatctt 748
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>gb|AC008556.5| Homo sapiens chromosome 19 clone CTC-526N19, complete sequence
          Length = 142515

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    ccctcccgccagccctccctcccc 139
              |||| |||||||||||||||||||
Sbjct: 114592 cccttccgccagccctccctcccc 114615
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>dbj|AK127884.1| Homo sapiens cDNA FLJ45990 fis, clone RECTM2001519
          Length = 1567

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 126 agccctccctccccacggcc 145
           ||||||||||||||||||||
Sbjct: 451 agccctccctccccacggcc 470
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>gb|AC090259.5| Homo sapiens chromosome 15, clone RP11-424E9, complete sequence
          Length = 143479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   ctccctccccacggcctcccccac 153
             |||||||||||| |||||||||||
Sbjct: 35478 ctccctccccaccgcctcccccac 35455
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>gb|AC105014.5| Homo sapiens chromosome 15, clone RP11-466P9, complete sequence
          Length = 189047

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 130  ctccctccccacggcctcccccac 153
            |||||||||||| |||||||||||
Sbjct: 8889 ctccctccccaccgcctcccccac 8912
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>gb|BT024817.1| Arabidopsis thaliana At1g68880 gene, complete cds
          Length = 417

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 agatgattggtgagatcggg 312
           ||||||||||||||||||||
Sbjct: 350 agatgattggtgagatcggg 369
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>gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 191117

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ccctcccgccagccctccctcccc 139
             |||||||||| |||||||||||||
Sbjct: 24905 ccctcccgccggccctccctcccc 24928
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>gb|S73809.1| xylose isomerase [Streptomyces diastaticus, No. 7 M1033, Genomic,
           1522 nt]
          Length = 1522

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 231 cgtcccccgcctcgccgagctccgcgcc 258
           ||||| |||||||||||||||| |||||
Sbjct: 309 cgtccgccgcctcgccgagctcggcgcc 336
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>dbj|AK003413.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110004E09 product:PROTEIN
           C21ORF59 homolog [Homo sapiens], full insert sequence
          Length = 1018

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 tgccctctctgctggatctt 363
           ||||||||||||||||||||
Sbjct: 694 tgccctctctgctggatctt 675
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>gb|AF400621.1|AF400621 Arabidopsis thaliana transcription factor-like protein bZIP8 mRNA,
           complete cds
          Length = 417

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 agatgattggtgagatcggg 312
           ||||||||||||||||||||
Sbjct: 350 agatgattggtgagatcggg 369
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>dbj|AK045905.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230321E19
           product:PROTEIN C21ORF59 homolog [Homo sapiens], full
           insert sequence
          Length = 1142

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 tgccctctctgctggatctt 363
           ||||||||||||||||||||
Sbjct: 782 tgccctctctgctggatctt 763
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>gb|AC016370.17|AC016370 Homo sapiens chromosome 15 clone RP11-424E9, complete sequence
          Length = 162773

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 130   ctccctccccacggcctcccccac 153
             |||||||||||| |||||||||||
Sbjct: 54773 ctccctccccaccgcctcccccac 54750
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 275     tgcgcaagctcgtcgccgag 294
               ||||||||||||||||||||
Sbjct: 4506839 tgcgcaagctcgtcgccgag 4506858
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>dbj|AK018510.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030416O06 product:PROTEIN C21ORF59
           homolog [Homo sapiens], full insert sequence
          Length = 1109

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 tgccctctctgctggatctt 363
           ||||||||||||||||||||
Sbjct: 774 tgccctctctgctggatctt 755
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    tccgcgccgacgaggccggc 270
              ||||||||||||||||||||
Sbjct: 929087 tccgcgccgacgaggccggc 929106
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>gb|AF332859.1|AF332859S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exon 5 and
              partial cds
          Length = 270491

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 11     cagaaaaaggttttaagaggggga 34
              |||||||||| |||||||||||||
Sbjct: 165712 cagaaaaagggtttaagaggggga 165689
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 129      cctccctccccacggcctcc 148
                ||||||||||||||||||||
Sbjct: 15565354 cctccctccccacggcctcc 15565373
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>emb|BX816829.1|CNS0AE0Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH70ZC01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 agatgattggtgagatcggg 312
           ||||||||||||||||||||
Sbjct: 394 agatgattggtgagatcggg 413
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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
             complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   cctccctccccacggcctcc 148
             ||||||||||||||||||||
Sbjct: 52720 cctccctccccacggcctcc 52739
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>gb|AC116173.3| Homo sapiens BAC clone RP11-68E11 from 4, complete sequence
          Length = 10877

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    gaaacagaaaaaggttttaa 26
            ||||||||||||||||||||
Sbjct: 6256 gaaacagaaaaaggttttaa 6237
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>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence
          Length = 210232

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    atgccctctctgctggatct 362
              ||||||||||||||||||||
Sbjct: 206635 atgccctctctgctggatct 206616
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>gb|AC011914.9|AC011914 Arabidopsis thaliana chromosome 1 BAC F14K14 genomic sequence,
            complete sequence
          Length = 96808

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  agatgattggtgagatcggg 312
            ||||||||||||||||||||
Sbjct: 2929 agatgattggtgagatcggg 2948
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>gb|AC011665.8|AC011665 Arabidopsis thaliana chromosome 1 BAC T6L1 genomic sequence, complete
             sequence
          Length = 100515

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   agatgattggtgagatcggg 312
             ||||||||||||||||||||
Sbjct: 36206 agatgattggtgagatcggg 36187
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>gb|AC078843.2|AC078843 Homo sapiens chromosome 7 clone RP11-59F6, complete sequence
          Length = 179416

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   cctcccgccagccctccctcccca 140
             |||||| |||||||||||||||||
Sbjct: 89784 cctccctccagccctccctcccca 89807
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>gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, complete sequence
          Length = 184854

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ccctcccgccagccctccctcccc 139
             |||||||||| |||||||||||||
Sbjct: 52916 ccctcccgccggccctccctcccc 52939
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>gb|AC008997.5|AC008997 Homo sapiens chromosome 19 clone LLNLR-253D7, complete sequence
          Length = 41556

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 116   ccctcccgccagccctccctcccc 139
             |||| |||||||||||||||||||
Sbjct: 10804 cccttccgccagccctccctcccc 10827
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 279     caagctcgtcgccgagatga 298
               ||||||||||||||||||||
Sbjct: 6131940 caagctcgtcgccgagatga 6131921
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>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    ccgccagccctccctcccca 140
              ||||||||||||||||||||
Sbjct: 141230 ccgccagccctccctcccca 141249
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>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence
          Length = 253504

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 116   ccctcccgccagccctccctcccc 139
             ||||||| ||||||||||||||||
Sbjct: 14334 ccctccctccagccctccctcccc 14311
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>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence
          Length = 209191

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    gccctcccgccagccctccc 134
              ||||||||||||||||||||
Sbjct: 157880 gccctcccgccagccctccc 157861
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 129      cctccctccccacggcctcc 148
                ||||||||||||||||||||
Sbjct: 15573595 cctccctccccacggcctcc 15573614
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>gb|AF019907.1|AF019907 Vitis vinifera glutathione reductase (NADPH) (GOR) mRNA, partial
           cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 11  cagaaaaaggttttaagagg 30
           ||||||||||||||||||||
Sbjct: 871 cagaaaaaggttttaagagg 890
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>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    ccgccagccctccctcccca 140
              ||||||||||||||||||||
Sbjct: 168366 ccgccagccctccctcccca 168385
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>gb|AC115008.7| Mus musculus chromosome 3, clone RP24-189F12, complete sequence
          Length = 154667

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 326  tgtttatacccgacatgatgccctctct 353
            |||||||| || ||||||||||||||||
Sbjct: 4948 tgtttatatcccacatgatgccctctct 4975
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>gb|AC166166.2| Mus musculus BAC clone RP23-293B18 from chromosome 17, complete
            sequence
          Length = 177378

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 115  gccctcccgccagccctccc 134
            ||||||||||||||||||||
Sbjct: 2131 gccctcccgccagccctccc 2112
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>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete
             sequence
          Length = 191255

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   gccctcccgccagccctccctccc 138
             |||||||| |||||||||||||||
Sbjct: 62736 gccctccccccagccctccctccc 62713
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>emb|AL831790.3| Mouse DNA sequence from clone RP23-334I5 on chromosome 4, complete
             sequence
          Length = 206074

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    accaccactactcccaacca 58
             ||||||||||||||||||||
Sbjct: 38020 accaccactactcccaacca 38001


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,772,429
Number of Sequences: 3902068
Number of extensions: 3772429
Number of successful extensions: 85829
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84269
Number of HSP's gapped (non-prelim): 1560
length of query: 435
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 413
effective length of database: 17,147,199,772
effective search space: 7081793505836
effective search space used: 7081793505836
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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