>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  135 bits (68), Expect = 2e-28
 Identities = 139/163 (85%)
 Strand = Plus / Plus

                                                                           
Query: 330     ccagatcatgatcacaacaagtcagatccactaaagcaagttgaggcacttcaaattaag 389
               ||||||||||||  ||  |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 5031061 ccagatcatgatagcacaaagtcagatccactaaagcatgttgaggctcttcaaattaag 5031120

                                                                           
Query: 390     tttttgcggctggtacacaggactggactgcctcccagtaccaatgtagttgcacaggta 449
               ||  ||||||| || ||||| |||||| ||||||||| |||  |||| || |||||||||
Sbjct: 5031121 ttcctgcggcttgtgcacagaactggagtgcctcccactactgatgttgtcgcacaggta 5031180

                                                          
Query: 450     ctgtacagactgncacttgccaacttgatcaaggctggtgaat 492
               ||||||||| ||   |||||||||||||| || ||||| ||||
Sbjct: 5031181 ctgtacagattgcaccttgccaacttgattaaagctggcgaat 5031223



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                           
Query: 88      tgatgatgaacttcagggactggatctcataccggctcgggtcgtcgctgctgtcggcga 147
               ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 5030125 tgatgatgagcttcagggactggatctcgtaccggctcggctcgtcggtgctgtcggcga 5030184

                   
Query: 148     ggcc 151
               ||||
Sbjct: 5030185 ggcc 5030188

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  135 bits (68), Expect = 2e-28
 Identities = 139/163 (85%)
 Strand = Plus / Plus

                                                                           
Query: 330     ccagatcatgatcacaacaagtcagatccactaaagcaagttgaggcacttcaaattaag 389
               ||||||||||||  ||  |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 5031043 ccagatcatgatagcacaaagtcagatccactaaagcatgttgaggctcttcaaattaag 5031102

                                                                           
Query: 390     tttttgcggctggtacacaggactggactgcctcccagtaccaatgtagttgcacaggta 449
               ||  ||||||| || ||||| |||||| ||||||||| |||  |||| || |||||||||
Sbjct: 5031103 ttcctgcggcttgtgcacagaactggagtgcctcccactactgatgttgtcgcacaggta 5031162

                                                          
Query: 450     ctgtacagactgncacttgccaacttgatcaaggctggtgaat 492
               ||||||||| ||   |||||||||||||| || ||||| ||||
Sbjct: 5031163 ctgtacagattgcaccttgccaacttgattaaagctggcgaat 5031205



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                           
Query: 88      tgatgatgaacttcagggactggatctcataccggctcgggtcgtcgctgctgtcggcga 147
               ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 5030107 tgatgatgagcttcagggactggatctcgtaccggctcggctcgtcggtgctgtcggcga 5030166

                   
Query: 148     ggcc 151
               ||||
Sbjct: 5030167 ggcc 5030170

>emb|AL831811.5|CNS08CAO Oryza sativa chromosome 12, . BAC OJ1561_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91053

 Score =  135 bits (68), Expect = 2e-28
 Identities = 139/163 (85%)
 Strand = Plus / Plus

                                                                         
Query: 330   ccagatcatgatcacaacaagtcagatccactaaagcaagttgaggcacttcaaattaag 389
             ||||||||||||  ||  |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 74435 ccagatcatgatagcacaaagtcagatccactaaagcatgttgaggctcttcaaattaag 74494

                                                                         
Query: 390   tttttgcggctggtacacaggactggactgcctcccagtaccaatgtagttgcacaggta 449
             ||  ||||||| || ||||| |||||| ||||||||| |||  |||| || |||||||||
Sbjct: 74495 ttcctgcggcttgtgcacagaactggagtgcctcccactactgatgttgtcgcacaggta 74554

                                                        
Query: 450   ctgtacagactgncacttgccaacttgatcaaggctggtgaat 492
             ||||||||| ||   |||||||||||||| || ||||| ||||
Sbjct: 74555 ctgtacagattgcaccttgccaacttgattaaagctggcgaat 74597



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                         
Query: 88    tgatgatgaacttcagggactggatctcataccggctcgggtcgtcgctgctgtcggcga 147
             ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 73499 tgatgatgagcttcagggactggatctcgtaccggctcggctcgtcggtgctgtcggcga 73558

                 
Query: 148   ggcc 151
             ||||
Sbjct: 73559 ggcc 73562

>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 112231

 Score =  135 bits (68), Expect = 2e-28
 Identities = 139/163 (85%)
 Strand = Plus / Plus

                                                                        
Query: 330  ccagatcatgatcacaacaagtcagatccactaaagcaagttgaggcacttcaaattaag 389
            ||||||||||||  ||  |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1714 ccagatcatgatagcacaaagtcagatccactaaagcatgttgaggctcttcaaattaag 1773

                                                                        
Query: 390  tttttgcggctggtacacaggactggactgcctcccagtaccaatgtagttgcacaggta 449
            ||  ||||||| || ||||| |||||| ||||||||| |||  |||| || |||||||||
Sbjct: 1774 ttcctgcggcttgtgcacagaactggagtgcctcccactactgatgttgtcgcacaggta 1833

                                                       
Query: 450  ctgtacagactgncacttgccaacttgatcaaggctggtgaat 492
            ||||||||| ||   |||||||||||||| || ||||| ||||
Sbjct: 1834 ctgtacagattgcaccttgccaacttgattaaagctggcgaat 1876



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 60/64 (93%)
 Strand = Plus / Plus

                                                                       
Query: 88  tgatgatgaacttcagggactggatctcataccggctcgggtcgtcgctgctgtcggcga 147
           ||||||||| |||||||||||||||||| ||||||||||| |||||| ||||||||||||
Sbjct: 778 tgatgatgagcttcagggactggatctcgtaccggctcggctcgtcggtgctgtcggcga 837

               
Query: 148 ggcc 151
           ||||
Sbjct: 838 ggcc 841

>gb|AC127354.4| Mus musculus BAC clone RP23-91C8 from chromosome 6, complete sequence
          Length = 197318

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 212   tacaacacaaagtgagtttgtagaga 237
             ||||||||||||||||||| ||||||
Sbjct: 42376 tacaacacaaagtgagtttctagaga 42401

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Plus

                                                
Query: 120    cggctcgggtcgtcgctgctgtcggcgaggccgc 153
              ||||||||||| ||||||| ||||||||||||||
Sbjct: 240598 cggctcgggtc-tcgctgcggtcggcgaggccgc 240630

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 11     tctccggcaccatctatcgcct 32
              ||||||||||||||||||||||
Sbjct: 528934 tctccggcaccatctatcgcct 528955

>gb|AC122797.3| Mus musculus BAC clone RP24-392D22 from chromosome 6, complete sequence
          Length = 143868

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 212   tacaacacaaagtgagtttgtagaga 237
             ||||||||||||||||||| ||||||
Sbjct: 70202 tacaacacaaagtgagtttctagaga 70177

>dbj|AK041709.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630031E23 product:unclassifiable, full
            insert sequence
          Length = 2992

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 212  tacaacacaaagtgagtttgtagaga 237
            ||||||||||||||||||| ||||||
Sbjct: 1250 tacaacacaaagtgagtttctagaga 1225

>emb|CR376851.5| Zebrafish DNA sequence from clone DKEY-48N5 in linkage group 22,
            complete sequence
          Length = 51574

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 362  aaagcaagttgaggcacttca 382
            |||||||||||||||||||||
Sbjct: 3930 aaagcaagttgaggcacttca 3950

>dbj|AP001754.1| Homo sapiens genomic DNA, chromosome 21q, section 98/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gacgccggcgcctcccagggc 191
             |||||||||||||||||||||
Sbjct: 47033 gacgccggcgcctcccagggc 47013

>dbj|AB209578.1| Homo sapiens mRNA for C21orf2 protein variant protein
          Length = 4528

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 171  gacgccggcgcctcccagggc 191
            |||||||||||||||||||||
Sbjct: 3136 gacgccggcgcctcccagggc 3156

>dbj|AP001062.1| Homo sapiens genomic DNA, chromosome 21, clone:Q5B10, MX1-D21S171
             region, complete sequence
          Length = 36931

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   gacgccggcgcctcccagggc 191
             |||||||||||||||||||||
Sbjct: 21109 gacgccggcgcctcccagggc 21089

>dbj|AK074162.1| Homo sapiens mRNA for FLJ00235 protein
          Length = 4384

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 171 gacgccggcgcctcccagggc 191
           |||||||||||||||||||||
Sbjct: 179 gacgccggcgcctcccagggc 159

>ref|NM_180095.1| Arabidopsis thaliana kinase AT2G44830 mRNA, complete cds
          Length = 2369

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 ctgcctcccagtaccaatgt 436
           ||||||||||||||||||||
Sbjct: 770 ctgcctcccagtaccaatgt 789

>gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, complete sequence
          Length = 185119

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   aagcaagttgaggcacttca 382
             ||||||||||||||||||||
Sbjct: 70288 aagcaagttgaggcacttca 70307

>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 185     ccagggcgatggcgaaggta 204
               ||||||||||||||||||||
Sbjct: 1675670 ccagggcgatggcgaaggta 1675689

>gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, complete sequence
          Length = 221645

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 94   tgaacttcagggactggatc 113
            ||||||||||||||||||||
Sbjct: 4856 tgaacttcagggactggatc 4875

>gb|AC153950.8| Mus musculus 10 BAC RP24-444M16 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 193809

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 250    acatatttccttccaatgatagcc 273
              |||||||| |||||||||||||||
Sbjct: 112040 acatattttcttccaatgatagcc 112017

>gb|AC002388.3| Arabidopsis thaliana chromosome 2 clone T13E15 map m336, complete
             sequence
          Length = 85534

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   ctgcctcccagtaccaatgt 436
             ||||||||||||||||||||
Sbjct: 62327 ctgcctcccagtaccaatgt 62308

>gb|AY078927.1| Arabidopsis thaliana At2g44830/T13E15.16 mRNA, complete cds
          Length = 2369

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 ctgcctcccagtaccaatgt 436
           ||||||||||||||||||||
Sbjct: 770 ctgcctcccagtaccaatgt 789

>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     tcggcgaggccgctcgccat 160
               ||||||||||||||||||||
Sbjct: 1081999 tcggcgaggccgctcgccat 1082018

>gb|AC107746.9| Mus musculus chromosome 1, clone RP23-311K2, complete sequence
          Length = 202822

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    tgaacttcagggactggatc 113
             ||||||||||||||||||||
Sbjct: 10903 tgaacttcagggactggatc 10884

>gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, complete sequence
          Length = 194822

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    aagcaagttgaggcacttca 382
              ||||||||||||||||||||
Sbjct: 122126 aagcaagttgaggcacttca 122145


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,963,014
Number of Sequences: 3902068
Number of extensions: 3963014
Number of successful extensions: 63478
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 63299
Number of HSP's gapped (non-prelim): 181
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)