ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
2gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
4gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds 127 4e-26
5dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 127 4e-26
7gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome... 42 1.7
8gb|AC123835.4| Mus musculus BAC clone RP23-365J20 from chromosom... 42 1.7
9gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete... 40 6.9
10gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosom... 40 6.9
11gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia regio... 40 6.9
12emb|AL591847.8| Human DNA sequence from clone RP11-510L10 on chr... 40 6.9
13emb|AL590808.6| Human DNA sequence from clone RP13-483F6 on chro... 40 6.9
14emb|AL353728.8| Human DNA sequence from clone RP11-402B2 on chro... 40 6.9
15gb|AC151300.2| Xenopus tropicalis clone CH216-107C14, complete s... 40 6.9
16emb|AL732293.14| Mouse DNA sequence from clone RP23-360J13 on ch... 40 6.9
17ref|NM_170228.1| Drosophila melanogaster XNP CG4548-RA, transcri... 40 6.9
18ref|NM_143141.2| Drosophila melanogaster XNP CG4548-RB, transcri... 40 6.9
19gb|AC099781.2| Homo sapiens chromosome 3 clone RP11-791E14, comp... 40 6.9
20gb|AC099559.2| Homo sapiens chromosome 3 clone RP11-754F19, comp... 40 6.9
21gb|AY069822.1| Drosophila melanogaster SD07188 full length cDNA 40 6.9
22gb|AY058592.1| Drosophila melanogaster LD28477 full length cDNA 40 6.9
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
24gb|AF217802.1|AF217802 Drosophila melanogaster xnp/atr-x DNA hel... 40 6.9
25dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
26gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90... 40 6.9
27dbj|AP002370.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.9
28dbj|AP002751.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.9
29emb|CR792434.8| Zebrafish DNA sequence from clone CH211-219O9 in... 40 6.9
30gb|AC145738.4| Mus musculus BAC clone RP24-293H7 from 3, complet... 40 6.9 
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0034P08, complete sequence
          Length = 173088

 Score =  127 bits (64), Expect = 4e-26
 Identities = 258/322 (80%), Gaps = 3/322 (0%)
 Strand = Plus / Minus

                                                                         
Query: 90    gcttacaatggctggaaatcagcagccggcttcagttgtgttggattatgcagcagtcct 149
             |||||| |||||||||| || |||| |  ||||||||  | ||||| ||||||||||  |
Sbjct: 34808 gcttaccatggctggaactcggcagacaacttcagttccgatggataatgcagcagttgt 34749

                                                                         
Query: 150   cgacgccaaacccttgcgcacactgacccccatgttccctgcaccgctagggatgcacac 209
              || || ||||||||||||||| |||| ||||||||||||||  | || ||  |||||||
Sbjct: 34748 tgatgcaaaacccttgcgcacattgactcccatgttccctgcggcacttggtctgcacac 34689

                                                                         
Query: 210   tttcacccctaaa---agctcatcttcagttgtctgtgtcaccccgtttggaccatatgc 266
             ||||||  |||||   | |||||||||  |||||||| | ||||||||||||||||||||
Sbjct: 34688 tttcactgctaaagaaaactcatcttcgattgtctgtattaccccgtttggaccatatgc 34629

                                                                         
Query: 267   tggaggtaccgaactgggaatgcctggtggtgttccgccaatgttaacatcaccgtccgc 326
             ||| || || |||| || |||||||| | || |||| ||||||||  |||||||| | ||
Sbjct: 34628 tgggggcactgaacaggcaatgcctgctagtattccaccaatgtttgcatcaccggctgc 34569

                                                                         
Query: 327   ttctgcagatcccaagcaggtgcagccatatacggttcatatgaatggaacttctaatgc 386
               ||||||| ||||| |||  |||||||||| | |||||  |||||||| || ||  |||
Sbjct: 34568 ccctgcagaccccaaccagaggcagccatatgctgttcacttgaatggagctgctcctgc 34509

                                   
Query: 387   taatggtactacaagcaacaca 408
             ||| |||||  ||| |||||||
Sbjct: 34508 taacggtacagcaaacaacaca 34487



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   tctggtaagaagaagagggg 476
             ||||||||||||||||||||
Sbjct: 34309 tctggtaagaagaagagggg 34290
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>gb|AC109594.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0007P22, complete sequence
          Length = 148068

 Score =  127 bits (64), Expect = 4e-26
 Identities = 258/322 (80%), Gaps = 3/322 (0%)
 Strand = Plus / Minus

                                                                          
Query: 90     gcttacaatggctggaaatcagcagccggcttcagttgtgttggattatgcagcagtcct 149
              |||||| |||||||||| || |||| |  ||||||||  | ||||| ||||||||||  |
Sbjct: 146326 gcttaccatggctggaactcggcagacaacttcagttccgatggataatgcagcagttgt 146267

                                                                          
Query: 150    cgacgccaaacccttgcgcacactgacccccatgttccctgcaccgctagggatgcacac 209
               || || ||||||||||||||| |||| ||||||||||||||  | || ||  |||||||
Sbjct: 146266 tgatgcaaaacccttgcgcacattgactcccatgttccctgcggcacttggtctgcacac 146207

                                                                          
Query: 210    tttcacccctaaa---agctcatcttcagttgtctgtgtcaccccgtttggaccatatgc 266
              ||||||  |||||   | |||||||||  |||||||| | ||||||||||||||||||||
Sbjct: 146206 tttcactgctaaagaaaactcatcttcgattgtctgtattaccccgtttggaccatatgc 146147

                                                                          
Query: 267    tggaggtaccgaactgggaatgcctggtggtgttccgccaatgttaacatcaccgtccgc 326
              ||| || || |||| || |||||||| | || |||| ||||||||  |||||||| | ||
Sbjct: 146146 tgggggcactgaacaggcaatgcctgctagtattccaccaatgtttgcatcaccggctgc 146087

                                                                          
Query: 327    ttctgcagatcccaagcaggtgcagccatatacggttcatatgaatggaacttctaatgc 386
                ||||||| ||||| |||  |||||||||| | |||||  |||||||| || ||  |||
Sbjct: 146086 ccctgcagaccccaaccagaggcagccatatgctgttcacttgaatggagctgctcctgc 146027

                                    
Query: 387    taatggtactacaagcaacaca 408
              ||| |||||  ||| |||||||
Sbjct: 146026 taacggtacagcaaacaacaca 146005



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    tctggtaagaagaagagggg 476
              ||||||||||||||||||||
Sbjct: 145827 tctggtaagaagaagagggg 145808
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  127 bits (64), Expect = 4e-26
 Identities = 258/322 (80%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                            
Query: 90       gcttacaatggctggaaatcagcagccggcttcagttgtgttggattatgcagcagtcct 149
                |||||| |||||||||| || |||| |  ||||||||  | ||||| ||||||||||  |
Sbjct: 22306490 gcttaccatggctggaactcggcagacaacttcagttccgatggataatgcagcagttgt 22306549

                                                                            
Query: 150      cgacgccaaacccttgcgcacactgacccccatgttccctgcaccgctagggatgcacac 209
                 || || ||||||||||||||| |||| ||||||||||||||  | || ||  |||||||
Sbjct: 22306550 tgatgcaaaacccttgcgcacattgactcccatgttccctgcggcacttggtctgcacac 22306609

                                                                            
Query: 210      tttcacccctaaa---agctcatcttcagttgtctgtgtcaccccgtttggaccatatgc 266
                ||||||  |||||   | |||||||||  |||||||| | ||||||||||||||||||||
Sbjct: 22306610 tttcactgctaaagaaaactcatcttcgattgtctgtattaccccgtttggaccatatgc 22306669

                                                                            
Query: 267      tggaggtaccgaactgggaatgcctggtggtgttccgccaatgttaacatcaccgtccgc 326
                ||| || || |||| || |||||||| | || |||| ||||||||  |||||||| | ||
Sbjct: 22306670 tgggggcactgaacaggcaatgcctgctagtattccaccaatgtttgcatcaccggctgc 22306729

                                                                            
Query: 327      ttctgcagatcccaagcaggtgcagccatatacggttcatatgaatggaacttctaatgc 386
                  ||||||| ||||| |||  |||||||||| | |||||  |||||||| || ||  |||
Sbjct: 22306730 ccctgcagaccccaaccagaggcagccatatgctgttcacttgaatggagctgctcctgc 22306789

                                      
Query: 387      taatggtactacaagcaacaca 408
                ||| |||||  ||| |||||||
Sbjct: 22306790 taacggtacagcaaacaacaca 22306811



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 457      tctggtaagaagaagagggg 476
                ||||||||||||||||||||
Sbjct: 22306989 tctggtaagaagaagagggg 22307008
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>gb|AF344453.1|AF344453 Oryza sativa SET1 (SET1) mRNA, complete cds
          Length = 2982

 Score =  127 bits (64), Expect = 4e-26
 Identities = 258/322 (80%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  gcttacaatggctggaaatcagcagccggcttcagttgtgttggattatgcagcagtcct 149
           |||||| |||||||||| || |||| |  ||||||||  | ||||| ||||||||||  |
Sbjct: 69  gcttaccatggctggaactcggcagacaacttcagttccgatggataatgcagcagttgt 128

                                                                       
Query: 150 cgacgccaaacccttgcgcacactgacccccatgttccctgcaccgctagggatgcacac 209
            || || ||||||||||||||| |||| ||||||||||||||  | || ||  |||||||
Sbjct: 129 tgatgcaaaacccttgcgcacattgactcccatgttccctgcggcacttggtctgcacac 188

                                                                       
Query: 210 tttcacccctaaa---agctcatcttcagttgtctgtgtcaccccgtttggaccatatgc 266
           ||||||  |||||   | |||||||||  |||||||| | ||||||||||||||||||||
Sbjct: 189 tttcactgctaaagaaaactcatcttcgattgtctgtattaccccgtttggaccatatgc 248

                                                                       
Query: 267 tggaggtaccgaactgggaatgcctggtggtgttccgccaatgttaacatcaccgtccgc 326
           ||| || || |||| || |||||||| | || |||| ||||||||  |||||||| | ||
Sbjct: 249 tgggggcactgaacaggcaatgcctgctagtattccaccaatgtttgcatcaccggctgc 308

                                                                       
Query: 327 ttctgcagatcccaagcaggtgcagccatatacggttcatatgaatggaacttctaatgc 386
             ||||||| ||||| |||  |||||||||| | |||||  |||||||| || ||  |||
Sbjct: 309 ccctgcagaccccaaccagaggcagccatatgctgttcacttgaatggagctgctcctgc 368

                                 
Query: 387 taatggtactacaagcaacaca 408
           ||| |||||  ||| |||||||
Sbjct: 369 taacggtacagcaaacaacaca 390



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 tctggtaagaagaagagggg 476
           ||||||||||||||||||||
Sbjct: 568 tctggtaagaagaagagggg 587
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>dbj|AK102379.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092A08, full
           insert sequence
          Length = 3270

 Score =  127 bits (64), Expect = 4e-26
 Identities = 258/322 (80%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  gcttacaatggctggaaatcagcagccggcttcagttgtgttggattatgcagcagtcct 149
           |||||| |||||||||| || |||| |  ||||||||  | ||||| ||||||||||  |
Sbjct: 386 gcttaccatggctggaactcggcagacaacttcagttccgatggataatgcagcagttgt 445

                                                                       
Query: 150 cgacgccaaacccttgcgcacactgacccccatgttccctgcaccgctagggatgcacac 209
            || || ||||||||||||||| |||| ||||||||||||||  | || ||  |||||||
Sbjct: 446 tgatgcaaaacccttgcgcacattgactcccatgttccctgcggcacttggtctgcacac 505

                                                                       
Query: 210 tttcacccctaaa---agctcatcttcagttgtctgtgtcaccccgtttggaccatatgc 266
           ||||||  |||||   | |||||||||  |||||||| | ||||||||||||||||||||
Sbjct: 506 tttcactgctaaagaaaactcatcttcgattgtctgtattaccccgtttggaccatatgc 565

                                                                       
Query: 267 tggaggtaccgaactgggaatgcctggtggtgttccgccaatgttaacatcaccgtccgc 326
           ||| || || |||| || |||||||| | || |||| ||||||||  |||||||| | ||
Sbjct: 566 tgggggcactgaacaggcaatgcctgctagtattccaccaatgtttgcatcaccggctgc 625

                                                                       
Query: 327 ttctgcagatcccaagcaggtgcagccatatacggttcatatgaatggaacttctaatgc 386
             ||||||| ||||| |||  |||||||||| | |||||  |||||||| || ||  |||
Sbjct: 626 ccctgcagaccccaaccagaggcagccatatgctgttcacttgaatggagctgctcctgc 685

                                 
Query: 387 taatggtactacaagcaacaca 408
           ||| |||||  ||| |||||||
Sbjct: 686 taacggtacagcaaacaacaca 707



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 tctggtaagaagaagagggg 476
           ||||||||||||||||||||
Sbjct: 885 tctggtaagaagaagagggg 904
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  127 bits (64), Expect = 4e-26
 Identities = 258/322 (80%), Gaps = 3/322 (0%)
 Strand = Plus / Plus

                                                                            
Query: 90       gcttacaatggctggaaatcagcagccggcttcagttgtgttggattatgcagcagtcct 149
                |||||| |||||||||| || |||| |  ||||||||  | ||||| ||||||||||  |
Sbjct: 22616401 gcttaccatggctggaactcggcagacaacttcagttccgatggataatgcagcagttgt 22616460

                                                                            
Query: 150      cgacgccaaacccttgcgcacactgacccccatgttccctgcaccgctagggatgcacac 209
                 || || ||||||||||||||| |||| ||||||||||||||  | || ||  |||||||
Sbjct: 22616461 tgatgcaaaacccttgcgcacattgactcccatgttccctgcggcacttggtctgcacac 22616520

                                                                            
Query: 210      tttcacccctaaa---agctcatcttcagttgtctgtgtcaccccgtttggaccatatgc 266
                ||||||  |||||   | |||||||||  |||||||| | ||||||||||||||||||||
Sbjct: 22616521 tttcactgctaaagaaaactcatcttcgattgtctgtattaccccgtttggaccatatgc 22616580

                                                                            
Query: 267      tggaggtaccgaactgggaatgcctggtggtgttccgccaatgttaacatcaccgtccgc 326
                ||| || || |||| || |||||||| | || |||| ||||||||  |||||||| | ||
Sbjct: 22616581 tgggggcactgaacaggcaatgcctgctagtattccaccaatgtttgcatcaccggctgc 22616640

                                                                            
Query: 327      ttctgcagatcccaagcaggtgcagccatatacggttcatatgaatggaacttctaatgc 386
                  ||||||| ||||| |||  |||||||||| | |||||  |||||||| || ||  |||
Sbjct: 22616641 ccctgcagaccccaaccagaggcagccatatgctgttcacttgaatggagctgctcctgc 22616700

                                      
Query: 387      taatggtactacaagcaacaca 408
                ||| |||||  ||| |||||||
Sbjct: 22616701 taacggtacagcaaacaacaca 22616722



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 457      tctggtaagaagaagagggg 476
                ||||||||||||||||||||
Sbjct: 22616900 tctggtaagaagaagagggg 22616919
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>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete sequence
          Length = 189253

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 5      tggcttgtggacaagtgtagacctg 29
              ||||| |||||||||||||||||||
Sbjct: 186911 tggctagtggacaagtgtagacctg 186935
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>gb|AC123835.4| Mus musculus BAC clone RP23-365J20 from chromosome 9, complete sequence
          Length = 219799

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 5      tggcttgtggacaagtgtagacctg 29
              ||||| |||||||||||||||||||
Sbjct: 174542 tggctagtggacaagtgtagacctg 174518
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>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence
          Length = 161996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   ctggtggtgttccgccaatg 309
             ||||||||||||||||||||
Sbjct: 50002 ctggtggtgttccgccaatg 50021
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>gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosome 3, complete sequence
          Length = 187545

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   acacaggagtctggtaagaa 467
             ||||||||||||||||||||
Sbjct: 21869 acacaggagtctggtaagaa 21850
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>gb|AE014311.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 8 of
              11 of the complete sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     gtagacaaagagacaaagaaattg 52
              ||||| ||||||||||||||||||
Sbjct: 189466 gtagaaaaagagacaaagaaattg 189489
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>emb|AL591847.8| Human DNA sequence from clone RP11-510L10 on chromosome 13, complete
             sequence
          Length = 171596

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    gtagacaaagagacaaagaaattg 52
             ||||| ||||||||||||||||||
Sbjct: 70131 gtagaaaaagagacaaagaaattg 70154
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>emb|AL590808.6| Human DNA sequence from clone RP13-483F6 on chromosome X Contains a
             serine or cysteine proteinase inhibitor clade A (alpha-1
             antiproteinase, antitrypsin) member 7 (SERPINA7)
             pseudogene and the 5' end of gene FLJ10178, complete
             sequence
          Length = 102184

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ggatgcacactttcacccct 219
             ||||||||||||||||||||
Sbjct: 99653 ggatgcacactttcacccct 99634
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>emb|AL353728.8| Human DNA sequence from clone RP11-402B2 on chromosome 9 Contains a
            high-mobility group protein pseudogene, complete sequence
          Length = 165739

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 366  tatgaatggaacttctaatg 385
            ||||||||||||||||||||
Sbjct: 2051 tatgaatggaacttctaatg 2032
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>gb|AC151300.2| Xenopus tropicalis clone CH216-107C14, complete sequence
          Length = 134023

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 198   agggatgcacactttcacccctaa 221
             |||||||| |||||||||||||||
Sbjct: 13601 agggatgcccactttcacccctaa 13578
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>emb|AL732293.14| Mouse DNA sequence from clone RP23-360J13 on chromosome 11, complete
             sequence
          Length = 117779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    agaaagatcagttgtcagct 92
             ||||||||||||||||||||
Sbjct: 97668 agaaagatcagttgtcagct 97649
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>ref|NM_170228.1| Drosophila melanogaster XNP CG4548-RA, transcript variant A (XNP),
            mRNA
          Length = 4492

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  ctggtggtgttccgccaatg 309
            ||||||||||||||||||||
Sbjct: 3998 ctggtggtgttccgccaatg 4017
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>ref|NM_143141.2| Drosophila melanogaster XNP CG4548-RB, transcript variant B (XNP),
            mRNA
          Length = 4812

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  ctggtggtgttccgccaatg 309
            ||||||||||||||||||||
Sbjct: 4318 ctggtggtgttccgccaatg 4337
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>gb|AC099781.2| Homo sapiens chromosome 3 clone RP11-791E14, complete sequence
          Length = 200704

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    aacttctaatgctaatggta 394
              ||||||||||||||||||||
Sbjct: 196664 aacttctaatgctaatggta 196683
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>gb|AC099559.2| Homo sapiens chromosome 3 clone RP11-754F19, complete sequence
          Length = 162752

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  aacttctaatgctaatggta 394
            ||||||||||||||||||||
Sbjct: 1388 aacttctaatgctaatggta 1407
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>gb|AY069822.1| Drosophila melanogaster SD07188 full length cDNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  ctggtggtgttccgccaatg 309
            ||||||||||||||||||||
Sbjct: 1869 ctggtggtgttccgccaatg 1888
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>gb|AY058592.1| Drosophila melanogaster LD28477 full length cDNA
          Length = 4813

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  ctggtggtgttccgccaatg 309
            ||||||||||||||||||||
Sbjct: 4307 ctggtggtgttccgccaatg 4326
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 463     aagaagaagagggggatggt 482
               ||||||||||||||||||||
Sbjct: 1748960 aagaagaagagggggatggt 1748941
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>gb|AF217802.1|AF217802 Drosophila melanogaster xnp/atr-x DNA helicase mRNA, complete cds
          Length = 4490

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  ctggtggtgttccgccaatg 309
            ||||||||||||||||||||
Sbjct: 3985 ctggtggtgttccgccaatg 4004
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G11
          Length = 143943

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   aagaagaagagggggatggt 482
             ||||||||||||||||||||
Sbjct: 66972 aagaagaagagggggatggt 66953
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>gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90 of 118 of the
            complete sequence
          Length = 188285

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 290  ctggtggtgttccgccaatg 309
            ||||||||||||||||||||
Sbjct: 5260 ctggtggtgttccgccaatg 5241
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>dbj|AP002370.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-160H12, complete
             sequence
          Length = 174697

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    acaagtgtagacctgtagac 34
             ||||||||||||||||||||
Sbjct: 81303 acaagtgtagacctgtagac 81322
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>dbj|AP002751.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-682K9, complete
            sequence
          Length = 197847

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   acaagtgtagacctgtagac 34
            ||||||||||||||||||||
Sbjct: 2381 acaagtgtagacctgtagac 2400
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>emb|CR792434.8| Zebrafish DNA sequence from clone CH211-219O9 in linkage group 3,
             complete sequence
          Length = 69225

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ttcagttgtgttggattatg 139
             ||||||||||||||||||||
Sbjct: 52551 ttcagttgtgttggattatg 52570
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>gb|AC145738.4| Mus musculus BAC clone RP24-293H7 from 3, complete sequence
          Length = 135567

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   acacaggagtctggtaagaa 467
             ||||||||||||||||||||
Sbjct: 96270 acacaggagtctggtaagaa 96251


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,294,213
Number of Sequences: 3902068
Number of extensions: 4294213
Number of successful extensions: 91921
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91797
Number of HSP's gapped (non-prelim): 118
length of query: 509
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 487
effective length of database: 17,147,199,772
effective search space: 8350686288964
effective search space used: 8350686288964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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