>HSF_YEAST (P10961) Heat shock factor protein (HSF) (Heat shock transcription|
           factor) (HSTF)
          Length = 833

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +1

Query: 151 PFVSCDQSTDIGDSNVPNQNTSCAEDDLVSATEHLVIDADLPTYQDEGRDSIAD 312
           PF++ D  T + D+N    +T  + D   SATE+  +  +LP++ D    + AD
Sbjct: 742 PFLTVDDHT-LNDNNTSEGSTRVSPDIKFSATENTKVSDNLPSFNDHSYSTQAD 794

>Y1671_HAEIN (P44287) Hypothetical protein HI1671|
          Length = 416

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 178 QWTDHNSRMALLALVQLMPDKENNPLENSHLLNLKL 71
           +W+ H   M  L+++ LMP   N PL + HLL +K+
Sbjct: 49  RWSLHRCAMIALSILILMPFSLNYPLLSLHLLGIKI 84

>RNF19_HUMAN (Q9NV58) RING finger protein 19 (Dorfin) (Double ring-finger|
           protein) (p38 protein)
          Length = 838

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = -2

Query: 256 PSAQLQKLDHLQHNWCSDLGHYYHQCQW--TDHNSRMALLALVQLMPDKENNPLENS-HL 86
           PS       H     CSDL      C    +D+++R A    V ++P+ EN+ LENS H 
Sbjct: 718 PSVADSHSSHFSEFSCSDLESMKTSCSHGSSDYHTRFAT---VNILPEVENDRLENSPHQ 774

Query: 85  LNLKLVHWRMLLEKLDGVDHV 23
            ++ +V       ++  ++H+
Sbjct: 775 CSISVVTQTASCSEVSQLNHI 795

>TPR_HUMAN (P12270) Nucleoprotein TPR|
          Length = 2349

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +1

Query: 37   HQVSQEACANGLASDLTGDYSPMDCSPYQASVEQVPREPFVSCDQSTDIGDSNVPNQNTS 216
            +Q SQ++   G+     GDY+PM+ S   +   Q+            D+G      Q T+
Sbjct: 1887 NQDSQDSIGEGVTQ---GDYTPMEDSEETSQSLQI------------DLGPLQSDQQTTT 1931

Query: 217  CAEDDLVSATEHLVIDADLPTYQDEGRDSIAD 312
             ++D      + +VID+D     +E  D   D
Sbjct: 1932 SSQDGQGKGDDVIVIDSDDEEEDEEDDDDDED 1963

>AKA11_HUMAN (Q9UKA4) A-kinase anchor protein 11 (Protein kinase A-anchoring|
           protein 11) (PRKA11) (A kinase anchor protein 220 kDa)
           (AKAP 220) (hAKAP220)
          Length = 1901

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 169 QSTDIGDSNVPNQNTSCAEDDLVSATEHLVIDADLPTYQD 288
           ++TD  D +  NQ+ S  EDD V+A EHL  +     Y D
Sbjct: 167 ETTDEDDDDT-NQSVSSIEDDFVTAFEHLEEEETSKPYND 205

>IGA_NEIGO (P09790) IgA-specific serine endopeptidase precursor (EC 3.4.21.72)|
            (IgA protease)
          Length = 1532

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
 Frame = +1

Query: 43   VSQEACANGLASDL--TGDYSPMDCSPYQASVEQVPREPFVSCDQSTDIGDSNVPNQNTS 216
            +S E  ++  AS+   T D  P D +     VE    +P  +  ++     ++  + NT+
Sbjct: 1190 ISSEPSSDEDASESVSTSDKHPQDNTELHEKVETAGLQPRAAQPRTQAAAQADAVSTNTN 1249

Query: 217  CAEDDLVSATEHLVIDADLPTYQDEGRDSIADA 315
             A  D +++T+ +++D      +   + S ADA
Sbjct: 1250 SALSDAMASTQSILLDTGAYLTRHIAQKSRADA 1282

>PTSRA_XENLA (Q6GND3) Protein PTDSR-A|
          Length = 403

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 157 VSCDQSTDIGDSNVPNQNTSCAEDDLVSATE 249
           ++ D S+D   S+  + + SC+EDDL S  E
Sbjct: 338 IASDSSSDSSSSSSSSSSESCSEDDLSSGAE 368

>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3|
          Length = 1580

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
 Frame = +1

Query: 22   QHGQLHQVSQEACANGLASDLTGDYSPMDCSPYQASVEQVPREPFVSCDQSTDIGDSNVP 201
            Q GQL   SQ    NG+  ++ G   P+ CS  Q    Q   +      Q T  G  ++ 
Sbjct: 1405 QSGQLSDTSQTCRVNGIKMEMKGQPHPL-CSNLQNYSGQFYDQTVGFSQQDTKAGSFSIS 1463

Query: 202  N-----QNTSCAEDDLVS 240
            +     Q TS    +L+S
Sbjct: 1464 DASCLLQGTSAKNSELLS 1481

>GLI3_HUMAN (P10071) Zinc finger protein GLI3|
          Length = 1580

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
 Frame = +1

Query: 22   QHGQLHQVSQEACANGLASDLTGDYSPMDCSPYQASVEQVPREPFVSCDQSTDIGDSNVP 201
            Q GQL   SQ    NG+  ++ G   P+ CS  Q    Q   +      Q T  G  ++ 
Sbjct: 1405 QSGQLSDTSQTCRVNGIKMEMKGQPHPL-CSNLQNYSGQFYDQTVGFSQQDTKAGSFSIS 1463

Query: 202  N-----QNTSCAEDDLVS 240
            +     Q TS    +L+S
Sbjct: 1464 DASCLLQGTSAKNSELLS 1481


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.130    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,825,932
Number of Sequences: 219361
Number of extensions: 1060648
Number of successful extensions: 2313
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2312
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)