ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
2gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4ref|NM_185267.1| Oryza sativa (japonica cultivar-group), predic... 100 6e-18
5ref|XM_464409.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
7dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
8ref|XM_450706.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.080
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.080
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.080
11dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.080
12dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.080
13dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.080
14ref|XM_549856.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
15gb|AE005854.1| Caulobacter crescentus CB15 section 180 of 359 of... 44 0.32
16dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
17dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
18dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
19dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
20ref|XM_512217.1| PREDICTED: Pan troglodytes LOC455529 (LOC455529... 42 1.3
21ref|XM_469293.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
22gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's ... 42 1.3
23gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genom... 42 1.3
24ref|XM_420394.1| PREDICTED: Gallus gallus similar to Annexin A10... 42 1.3
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.3
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.3
27ref|NM_010450.1| Mus musculus homeo box A11 (Hoxa11), mRNA 42 1.3
28emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.3
29emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.3
30emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
31gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, co... 42 1.3
32dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, comp... 42 1.3
33gb|AE011666.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.3
34gb|AF499777.1| Xanthomonas axonopodis pv. glycines strain 8ra hr... 42 1.3
35dbj|AK133481.1| Mus musculus 11 days pregnant adult female ovary... 42 1.3
36gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.3
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
38gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 geno... 42 1.3
39ref|XM_575479.1| PREDICTED: Rattus norvegicus similar to homeobo... 42 1.3
40gb|AY109270.1| Zea mays PCO088979 mRNA sequence 42 1.3
41gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, com... 42 1.3
42gb|BC052232.1| Mus musculus cDNA clone IMAGE:6504963 42 1.3
43gb|U20371.1|MMU20371 Mus musculus homeobox protein (Hoxa11) gene... 42 1.3
44gb|U20370.1|MMU20370 Mus musculus homeobox protein (Hoxa11) mRNA... 42 1.3
45gb|U20367.1|MMU20367 Mus musculus Hoxa11 locus antisense-3C mRNA 42 1.3
46gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 4.9
47ref|XM_483474.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
48ref|XM_480953.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
49ref|XM_519609.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 4.9
50ref|XM_466223.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
51ref|XM_506827.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 4.9
52ref|XM_464052.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
53ref|XM_473768.1| Oryza sativa (japonica cultivar-group), predic... 40 4.9
54gb|BT017864.1| Zea mays clone EL01N0512A05.c mRNA sequence 40 4.9
55gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 40 4.9
56gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 4.9
57gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosyntheti... 40 4.9
58gb|DQ176868.1| Homo sapiens RecQ protein-like 4 (RECQL4) gene, c... 40 4.9
59gb|AY513239.1| Homo sapiens complement component 3 (C3) gene, co... 40 4.9
60ref|XM_540001.2| PREDICTED: Canis familiaris similar to ring fin... 40 4.9
61emb|AJ938071.1| Oryza sativa (indica cultivar-group) mRNA for Ty... 40 4.9
62gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 40 4.9
63gb|BC020496.2| Homo sapiens RecQ protein-like 4, mRNA (cDNA clon... 40 4.9
64ref|XM_966008.1| PREDICTED: Tribolium castaneum similar to XK-re... 40 4.9
65emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.9
66emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.9
67gb|AC123777.4| Homo sapiens chromosome 8, clone RP11-252C15, com... 40 4.9
68emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 4.9
69emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 4.9
70emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 4.9
71emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 4.9
72emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 40 4.9
73emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81... 40 4.9
74dbj|AB249662.1| Oryza sativa (japonica cultivar-group) OsRR2 mRN... 40 4.9
75gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 4.9
76gb|AE011799.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.9
77gb|CP000249.1| Frankia sp. CcI3, complete genome 40 4.9
78ref|NM_152271.3| Homo sapiens LON peptidase N-terminal domain an... 40 4.9
79dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
80dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
81gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete ... 40 4.9
82gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, com... 40 4.9
83dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.9
84gb|AE004486.1| Pseudomonas aeruginosa PAO1, section 47 of 529 of... 40 4.9
85gb|AE004462.1| Pseudomonas aeruginosa PAO1, section 23 of 529 of... 40 4.9
86ref|NM_004260.1| Homo sapiens RecQ protein-like 4 (RECQL4), mRNA 40 4.9
87gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.9
88gb|AC084125.9| Homo sapiens chromosome 8, clone CTD-2517M22, com... 40 4.9
89dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
90dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.9
91dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
92dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
93dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
94dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
95dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
96dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
97dbj|AK100945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
98dbj|AK070645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
99dbj|AK069453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
100emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 4.9
101emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 4.9
102emb|AJ628421.2| Micromonospora olivasterospora fortimicin biosyn... 40 4.9
103gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 4.9
104emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 40 4.9
105dbj|AB006532.1| Homo sapiens RecQ4 mRNA for DNA helicase, comple... 40 4.9
106dbj|AB026546.1| Homo sapiens gene for RECQL4 helicase, complete cds 40 4.9 
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
             complete sequence
          Length = 145044

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                         
Query: 209   cgcggagatgggggactcgagcgacgccgtcatggcgcggtggctgcagtccgcggggct 268
             ||||| ||||||||||||  | ||||||||||||||||||||||| ||||||||||||||
Sbjct: 20620 cgcggggatgggggactccggggacgccgtcatggcgcggtggctccagtccgcggggct 20679

                              
Query: 269   gcagcacctcgcggcct 285
             |||||||||||| ||||
Sbjct: 20680 gcagcacctcgccgcct 20696



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                 
Query: 120   gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcggcg 171
             ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 20501 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcggcg 20552
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>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0059G01,
              complete sequence
          Length = 141661

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 209    cgcggagatgggggactcgagcgacgccgtcatggcgcggtggctgcagtccgcggggct 268
              ||||| ||||||||||||  | ||||||||||||||||||||||| ||||||||||||||
Sbjct: 130147 cgcggggatgggggactccggggacgccgtcatggcgcggtggctccagtccgcggggct 130206

                               
Query: 269    gcagcacctcgcggcct 285
              |||||||||||| ||||
Sbjct: 130207 gcagcacctcgccgcct 130223



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                  
Query: 120    gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcggcg 171
              ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 130028 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcggcg 130079
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                           
Query: 209     cgcggagatgggggactcgagcgacgccgtcatggcgcggtggctgcagtccgcggggct 268
               ||||| ||||||||||||  | ||||||||||||||||||||||| ||||||||||||||
Sbjct: 3142903 cgcggggatgggggactccggggacgccgtcatggcgcggtggctccagtccgcggggct 3142962

                                
Query: 269     gcagcacctcgcggcct 285
               |||||||||||| ||||
Sbjct: 3142963 gcagcacctcgccgcct 3142979



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Plus

                                                                   
Query: 120     gccgccaagttggcgccgcagcggaggtcgcagcgcctcgccggcggcggcg 171
               ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 3142784 gccgccaagttggcgcctcagcgcaggtcgcagcgcctcgccggcggcggcg 3142835
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>ref|NM_185267.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2403

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                       
Query: 216 atgggggactcgagcgacgccgtcatggcgcggtggctgcagtccgcggggctgcagcac 275
           |||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1   atgggggactccggggacgccgtcatggcgcggtggctccagtccgcggggctgcagcac 60

                     
Query: 276 ctcgcggcct 285
           ||||| ||||
Sbjct: 61  ctcgccgcct 70
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>ref|XM_464409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1470

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 148 cgcagcgcctcgccggcggcggcg 171
           ||||||||||||||||||||||||
Sbjct: 125 cgcagcgcctcgccggcggcggcg 102
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 148     cgcagcgcctcgccggcggcggcg 171
               ||||||||||||||||||||||||
Sbjct: 5030255 cgcagcgcctcgccggcggcggcg 5030278



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 153      cgcctcgccggcggcggcgc 172
                ||||||||||||||||||||
Sbjct: 21150480 cgcctcgccggcggcggcgc 21150499



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 71      gatcgccgcgccgacgcggg 90
               ||||||||||||||||||||
Sbjct: 1932749 gatcgccgcgccgacgcggg 1932730
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>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0031B09
          Length = 132729

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 148    cgcagcgcctcgccggcggcggcg 171
              ||||||||||||||||||||||||
Sbjct: 101381 cgcagcgcctcgccggcggcggcg 101404
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>ref|XM_450706.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1230

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 152  gcgcctcgccggcggcggcgcgg 174
            |||||||||||||||||||||||
Sbjct: 1102 gcgcctcgccggcggcggcgcgg 1080
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 152      gcgcctcgccggcggcggcgcgg 174
                |||||||||||||||||||||||
Sbjct: 12324283 gcgcctcgccggcggcggcgcgg 12324261



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 152      gcgcctcgccggcggcggcg 171
                ||||||||||||||||||||
Sbjct: 18867058 gcgcctcgccggcggcggcg 18867077
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 337      gaggcggcgccggaggagcaggc 359
                |||||||||||||||||||||||
Sbjct: 11571258 gaggcggcgccggaggagcaggc 11571236



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 153      cgcctcgccggcggcggcgc 172
                ||||||||||||||||||||
Sbjct: 26408197 cgcctcgccggcggcggcgc 26408216



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     cgcctcgccggcggcggcgc 172
               ||||||||||||||||||||
Sbjct: 8881428 cgcctcgccggcggcggcgc 8881409
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>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1034_C08
          Length = 154441

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 337    gaggcggcgccggaggagcaggc 359
              |||||||||||||||||||||||
Sbjct: 125392 gaggcggcgccggaggagcaggc 125370
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>dbj|AP004694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0467G09
          Length = 158204

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 337   gaggcggcgccggaggagcaggc 359
             |||||||||||||||||||||||
Sbjct: 31529 gaggcggcgccggaggagcaggc 31507
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 152    gcgcctcgccggcggcggcgcgg 174
              |||||||||||||||||||||||
Sbjct: 107837 gcgcctcgccggcggcggcgcgg 107815
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>ref|XM_549856.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2381

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 gcgcctcgccggcggcggcgcg 173
           ||||||||||||||||||||||
Sbjct: 115 gcgcctcgccggcggcggcgcg 136
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>gb|AE005854.1| Caulobacter crescentus CB15 section 180 of 359 of the complete
           genome
          Length = 11094

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 150 cagcgcctcgccggcggcggcg 171
           ||||||||||||||||||||||
Sbjct: 622 cagcgcctcgccggcggcggcg 643
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 152    gcgcctcgccggcggcggcgcg 173
              ||||||||||||||||||||||
Sbjct: 419383 gcgcctcgccggcggcggcgcg 419362
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0005A05
          Length = 190834

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 152    gcgcctcgccggcggcggcgcg 173
              ||||||||||||||||||||||
Sbjct: 171221 gcgcctcgccggcggcggcgcg 171200
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 152   gcgcctcgccggcggcggcgcg 173
             ||||||||||||||||||||||
Sbjct: 59584 gcgcctcgccggcggcggcgcg 59563
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>dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F20, full
           insert sequence
          Length = 2381

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 152 gcgcctcgccggcggcggcgcg 173
           ||||||||||||||||||||||
Sbjct: 115 gcgcctcgccggcggcggcgcg 136
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>ref|XM_512217.1| PREDICTED: Pan troglodytes LOC455529 (LOC455529), mRNA
          Length = 15756

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 192   ggggcgtccgcgcaggccgcggaga 216
             ||||||||||||||||| |||||||
Sbjct: 13649 ggggcgtccgcgcaggcggcggaga 13625



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 192   ggggcgtccgcgcaggccgcggaga 216
             ||||||||||||||||| |||||||
Sbjct: 13547 ggggcgtccgcgcaggcggcggaga 13523
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>ref|XM_469293.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 161 cggcggcggcgcggggtccgccgccgctg 189
           |||||||||||||| | ||||||||||||
Sbjct: 116 cggcggcggcgcggtgcccgccgccgctg 144
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>gb|AC122669.6| Rattus norvegicus 4 BAC CH230-172C22 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 227955

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    cgccgcagcggaggtcgcagc 153
              |||||||||||||||||||||
Sbjct: 115575 cgccgcagcggaggtcgcagc 115595
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>gb|AC133335.4| Oryza sativa chromosome 3 BAC OSJNBa0005H05 genomic sequence,
            complete sequence
          Length = 55268

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 161  cggcggcggcgcggggtccgccgccgctg 189
            |||||||||||||| | ||||||||||||
Sbjct: 6641 cggcggcggcgcggtgcccgccgccgctg 6669
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>ref|XM_420394.1| PREDICTED: Gallus gallus similar to Annexin A10 (Annexin 14)
            (LOC422426), mRNA
          Length = 3418

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  cctgctcggcgggccccgccg 303
            |||||||||||||||||||||
Sbjct: 1618 cctgctcggcgggccccgccg 1598
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 163     gcggcggcgcggggtccgccgccgc 187
               |||||||||||| ||||||||||||
Sbjct: 2167463 gcggcggcgcggcgtccgccgccgc 2167487



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 66      cgccggatcgccgcgccgac 85
               ||||||||||||||||||||
Sbjct: 3176283 cgccggatcgccgcgccgac 3176302
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 161      cggcggcggcgcggggtccgccgccgctg 189
                |||||||||||||| | ||||||||||||
Sbjct: 26586923 cggcggcggcgcggtgcccgccgccgctg 26586951



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      gcgcctcgccggcggcggcg 171
                ||||||||||||||||||||
Sbjct: 24363585 gcgcctcgccggcggcggcg 24363566
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>ref|NM_010450.1| Mus musculus homeo box A11 (Hoxa11), mRNA
          Length = 2246

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 cgccgcagcggaggtcgcagc 153
           |||||||||||||||||||||
Sbjct: 588 cgccgcagcggaggtcgcagc 568
to top
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 59    tcgaccccgccggatcgccgc 79
             |||||||||||||||||||||
Sbjct: 73729 tcgaccccgccggatcgccgc 73709
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 148    cgcagcgcctcgccggcggcg 168
              |||||||||||||||||||||
Sbjct: 138951 cgcagcgcctcgccggcggcg 138971
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 163    gcggcggcgcggggtccgccgccgc 187
              |||||||||||| ||||||||||||
Sbjct: 329163 gcggcggcgcggcgtccgccgccgc 329187



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 66      cgccggatcgccgcgccgac 85
               ||||||||||||||||||||
Sbjct: 1353745 cgccggatcgccgcgccgac 1353764
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>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence
          Length = 169187

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   cgccgcagcggaggtcgcagc 153
             |||||||||||||||||||||
Sbjct: 39895 cgccgcagcggaggtcgcagc 39915
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>dbj|AP008931.1| Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence
          Length = 271577

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 314   cggcgccggcgtgggggcccttggaggcggcgc 346
             ||||||||||| ||||||| | |||||||||||
Sbjct: 58743 cggcgccggcgcgggggccgtgggaggcggcgc 58775
to top
>gb|AE011666.1| Xanthomonas axonopodis pv. citri str. 306,  section 44 of 469 of
           the complete genome
          Length = 13551

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 gcgcggcgccggcgtgggggc 331
           |||||||||||||||||||||
Sbjct: 937 gcgcggcgccggcgtgggggc 957
to top
>gb|AF499777.1| Xanthomonas axonopodis pv. glycines strain 8ra hrp pathogenicity
             island, complete sequence
          Length = 29206

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 311   gcgcggcgccggcgtgggggc 331
             |||||||||||||||||||||
Sbjct: 19572 gcgcggcgccggcgtgggggc 19552
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>dbj|AK133481.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA,
           RIKEN full-length enriched library, clone:5031409E18
           product:homeo box A11, full insert sequence
          Length = 2286

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 cgccgcagcggaggtcgcagc 153
           |||||||||||||||||||||
Sbjct: 631 cgccgcagcggaggtcgcagc 611
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 163     gcggcggcgcggggtccgccgccgc 187
               |||||||||||| ||||||||||||
Sbjct: 1995631 gcggcggcgcggcgtccgccgccgc 1995607



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      cgccggatcgccgcgccgac 85
               ||||||||||||||||||||
Sbjct: 1279328 cgccggatcgccgcgccgac 1279309
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 161      cggcggcggcgcggggtccgccgccgctg 189
                |||||||||||||| | ||||||||||||
Sbjct: 26678246 cggcggcggcgcggtgcccgccgccgctg 26678274



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      gcgcctcgccggcggcggcg 171
                ||||||||||||||||||||
Sbjct: 24281054 gcgcctcgccggcggcggcg 24281035
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>gb|AC079889.20| Oryza sativa chromosome 3 BAC OSJNBa0092M19 genomic sequence, complete
              sequence
          Length = 136712

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 161    cggcggcggcgcggggtccgccgccgctg 189
              |||||||||||||| | ||||||||||||
Sbjct: 109737 cggcggcggcgcggtgcccgccgccgctg 109765
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>ref|XM_575479.1| PREDICTED: Rattus norvegicus similar to homeobox protein
           (LOC500127), mRNA
          Length = 2275

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 cgccgcagcggaggtcgcagc 153
           |||||||||||||||||||||
Sbjct: 609 cgccgcagcggaggtcgcagc 589
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>gb|AY109270.1| Zea mays PCO088979 mRNA sequence
          Length = 1193

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 149 gcagcgcctcgccggcggcggcgcggggtccgccgcc 185
           ||||||| ||||||||  |||||||||||||| ||||
Sbjct: 86  gcagcgcatcgccggcaccggcgcggggtccgtcgcc 50
to top
>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence
          Length = 201379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   cgccgcagcggaggtcgcagc 153
             |||||||||||||||||||||
Sbjct: 68186 cgccgcagcggaggtcgcagc 68166
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>gb|BC052232.1| Mus musculus cDNA clone IMAGE:6504963
          Length = 2307

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 cgccgcagcggaggtcgcagc 153
           |||||||||||||||||||||
Sbjct: 609 cgccgcagcggaggtcgcagc 589
to top
>gb|U20371.1|MMU20371 Mus musculus homeobox protein (Hoxa11) gene, complete cds
          Length = 9038

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 133  cgccgcagcggaggtcgcagc 153
            |||||||||||||||||||||
Sbjct: 5247 cgccgcagcggaggtcgcagc 5227
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>gb|U20370.1|MMU20370 Mus musculus homeobox protein (Hoxa11) mRNA, complete cds
          Length = 2243

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 cgccgcagcggaggtcgcagc 153
           |||||||||||||||||||||
Sbjct: 587 cgccgcagcggaggtcgcagc 567
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>gb|U20367.1|MMU20367 Mus musculus Hoxa11 locus antisense-3C mRNA
          Length = 1434

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 cgccgcagcggaggtcgcagc 153
           |||||||||||||||||||||
Sbjct: 99  cgccgcagcggaggtcgcagc 119
to top
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    cggcggcggcgcggggtccg 180
              ||||||||||||||||||||
Sbjct: 145946 cggcggcggcgcggggtccg 145927



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    cggcggcggcgcggggtccg 180
              ||||||||||||||||||||
Sbjct: 128063 cggcggcggcgcggggtccg 128082
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>ref|XM_483474.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  cgcctcgccggcggcggcgc 172
            ||||||||||||||||||||
Sbjct: 1488 cgcctcgccggcggcggcgc 1507
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>ref|XM_480953.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2850

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 372 cgcctcgccggcggcggcgc 391
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>ref|XM_519609.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ23749
           (LOC464000), mRNA
          Length = 2364

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 147 tcgcagcgcctcgccggcggcggc 170
           |||||||||||||| |||||||||
Sbjct: 780 tcgcagcgcctcgcaggcggcggc 757
to top
>ref|XM_466223.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1412

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 258 cgcctcgccggcggcggcgc 239
to top
>ref|XM_506827.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0038F20.11
           mRNA
          Length = 1666

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 286 cgcctcgccggcggcggcgc 267
to top
>ref|XM_464052.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2250

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  gatcgccgcgccgacgcggg 90
           ||||||||||||||||||||
Sbjct: 466 gatcgccgcgccgacgcggg 485
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>ref|XM_473768.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2376

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 147 tcgcagcgcctcgccggcggcggc 170
           |||| |||||||||||||||||||
Sbjct: 561 tcgcggcgcctcgccggcggcggc 584
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>gb|BT017864.1| Zea mays clone EL01N0512A05.c mRNA sequence
          Length = 1184

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 149 gcagcgcctcgccggcggcggcgcggggtccg 180
           ||||||| ||||||||  ||||||||||||||
Sbjct: 69  gcagcgcatcgccggcaccggcgcggggtccg 38
to top
>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
              sequence
          Length = 120254

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    gcgcctcgccggcggcggcg 171
              ||||||||||||||||||||
Sbjct: 110372 gcgcctcgccggcggcggcg 110391
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 233     cgccgtcatggcgcggtggc 252
               ||||||||||||||||||||
Sbjct: 1634342 cgccgtcatggcgcggtggc 1634361
to top
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete
              sequence
          Length = 135638

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    ctcgcggcctgctcggcggg 295
              ||||||||||||||||||||
Sbjct: 110157 ctcgcggcctgctcggcggg 110176
to top
>gb|DQ176868.1| Homo sapiens RecQ protein-like 4 (RECQL4) gene, complete cds
          Length = 10293

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 335  tggaggcggcgccggaggag 354
            ||||||||||||||||||||
Sbjct: 2126 tggaggcggcgccggaggag 2145
to top
>gb|AY513239.1| Homo sapiens complement component 3 (C3) gene, complete cds
          Length = 46393

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    gccccccgcagatctgggac 58
             ||||||||||||||||||||
Sbjct: 14711 gccccccgcagatctgggac 14730
to top
>ref|XM_540001.2| PREDICTED: Canis familiaris similar to ring finger protein 127
            (LOC482886), mRNA
          Length = 3897

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 147  tcgcagcgcctcgccggcggcggc 170
            |||||||||||||| |||||||||
Sbjct: 1125 tcgcagcgcctcgcaggcggcggc 1102
to top
>emb|AJ938071.1| Oryza sativa (indica cultivar-group) mRNA for Type A response
           regulator 2 (rr2 gene)
          Length = 759

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 120 cgcctcgccggcggcggcgc 101
to top
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   gcgcctcgccggcggcggcg 171
             ||||||||||||||||||||
Sbjct: 17039 gcgcctcgccggcggcggcg 17058
to top
>gb|BC020496.2| Homo sapiens RecQ protein-like 4, mRNA (cDNA clone IMAGE:3902674),
           containing frame-shift errors
          Length = 3909

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 tggaggcggcgccggaggag 354
           ||||||||||||||||||||
Sbjct: 218 tggaggcggcgccggaggag 237
to top
>ref|XM_966008.1| PREDICTED: Tribolium castaneum similar to XK-related protein 7
            (LOC659731), mRNA
          Length = 1629

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  tgggggcccttggaggcggc 344
            ||||||||||||||||||||
Sbjct: 1306 tgggggcccttggaggcggc 1287
to top
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ggggctgcagcacctcgcgg 282
              ||||||||||||||||||||
Sbjct: 277510 ggggctgcagcacctcgcgg 277491
to top
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gaccagcgcggcgccggcgt 325
              ||||||||||||||||||||
Sbjct: 139862 gaccagcgcggcgccggcgt 139843
to top
>gb|AC123777.4| Homo sapiens chromosome 8, clone RP11-252C15, complete sequence
          Length = 175943

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    tcgcagcgcctcgccggcggcggc 170
              |||||||||||||| |||||||||
Sbjct: 106312 tcgcagcgcctcgcaggcggcggc 106289
to top
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gaccagcgcggcgccggcgt 325
              ||||||||||||||||||||
Sbjct: 140545 gaccagcgcggcgccggcgt 140526
to top
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ggggctgcagcacctcgcgg 282
              ||||||||||||||||||||
Sbjct: 189852 ggggctgcagcacctcgcgg 189833
to top
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ggggctgcagcacctcgcgg 282
             ||||||||||||||||||||
Sbjct: 31580 ggggctgcagcacctcgcgg 31561
to top
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gaccagcgcggcgccggcgt 325
              ||||||||||||||||||||
Sbjct: 197976 gaccagcgcggcgccggcgt 197957
to top
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
             complete sequence
          Length = 166804

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   tcgcagcgcctcgccggcggcggc 170
             |||| |||||||||||||||||||
Sbjct: 39875 tcgcggcgcctcgccggcggcggc 39898
to top
>emb|AJ515144.2|AXY515144 Achromobacter xylosoxidans plasmid pA81, strain A8
          Length = 98192

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   cgcagcgcctcgccggcggc 167
             ||||||||||||||||||||
Sbjct: 11079 cgcagcgcctcgccggcggc 11060
to top
>dbj|AB249662.1| Oryza sativa (japonica cultivar-group) OsRR2 mRNA for typeA
           response regulator 2, complete cds
          Length = 759

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 120 cgcctcgccggcggcggcgc 101
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 251     gctgcagtccgcggggctgc 270
               ||||||||||||||||||||
Sbjct: 2359919 gctgcagtccgcggggctgc 2359900
to top
>gb|AE011799.1| Xanthomonas axonopodis pv. citri str. 306,  section 177 of 469 of the
            complete genome
          Length = 12995

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 60   cgaccccgccggatcgccgcgccg 83
            ||||||||| ||||||||||||||
Sbjct: 4848 cgaccccgcaggatcgccgcgccg 4825
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 155     cctcgccggcggcggcgcgg 174
               ||||||||||||||||||||
Sbjct: 2922744 cctcgccggcggcggcgcgg 2922725



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 150     cagcgcctcgccggcggcgg 169
               ||||||||||||||||||||
Sbjct: 2814279 cagcgcctcgccggcggcgg 2814260
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>ref|NM_152271.3| Homo sapiens LON peptidase N-terminal domain and ring finger 1
           (LONRF1), mRNA
          Length = 3584

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 147 tcgcagcgcctcgccggcggcggc 170
           |||||||||||||| |||||||||
Sbjct: 780 tcgcagcgcctcgcaggcggcggc 757
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 147      tcgcagcgcctcgccggcggcggc 170
                |||| |||||||||||||||||||
Sbjct: 30406497 tcgcggcgcctcgccggcggcggc 30406520
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      ctcgccggcggcggcgcggg 175
                ||||||||||||||||||||
Sbjct: 21470491 ctcgccggcggcggcgcggg 21470472
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>gb|AC015631.10|AC015631 Homo sapiens, clone RP11-45L5, complete sequence
          Length = 145138

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 149   gcagcgcctcgccggcggcggcgc 172
             ||||||||||| ||||||||||||
Sbjct: 63763 gcagcgcctcggcggcggcggcgc 63740
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>gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, complete sequence
          Length = 200167

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     gccccccgcagatctgggac 58
              ||||||||||||||||||||
Sbjct: 143626 gccccccgcagatctgggac 143607
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 149     gcagcgcctcgccggcggcg 168
               ||||||||||||||||||||
Sbjct: 1128087 gcagcgcctcgccggcggcg 1128106
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>gb|AE004486.1| Pseudomonas aeruginosa PAO1, section 47 of 529 of the complete genome
          Length = 12874

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  gcagcgcctcgccggcggcg 168
            ||||||||||||||||||||
Sbjct: 9507 gcagcgcctcgccggcggcg 9488
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>gb|AE004462.1| Pseudomonas aeruginosa PAO1, section 23 of 529 of the complete genome
          Length = 9953

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 146  gtcgcagcgcctcgccggcggcggcgcg 173
            ||||||| | ||||||||||||||||||
Sbjct: 5093 gtcgcagaggctcgccggcggcggcgcg 5066
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>ref|NM_004260.1| Homo sapiens RecQ protein-like 4 (RECQL4), mRNA
          Length = 3627

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 tggaggcggcgccggaggag 354
           ||||||||||||||||||||
Sbjct: 92  tggaggcggcgccggaggag 111
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     gccggatcgccgcgccgacg 86
              ||||||||||||||||||||
Sbjct: 799392 gccggatcgccgcgccgacg 799411



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    cctcgccggcggcggcgcgg 174
              ||||||||||||||||||||
Sbjct: 161060 cctcgccggcggcggcgcgg 161041
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>gb|AC084125.9| Homo sapiens chromosome 8, clone CTD-2517M22, complete sequence
          Length = 197294

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    tggaggcggcgccggaggag 354
              ||||||||||||||||||||
Sbjct: 111123 tggaggcggcgccggaggag 111142
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>dbj|AP003859.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1033_B09
          Length = 120648

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   cgcctcgccggcggcggcgc 172
             ||||||||||||||||||||
Sbjct: 65071 cgcctcgccggcggcggcgc 65052
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 61      gaccccgccggatcgccgcg 80
               ||||||||||||||||||||
Sbjct: 5187570 gaccccgccggatcgccgcg 5187589



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 160     ccggcggcggcgcggggtccgccg 183
               ||||||||||||||||| ||||||
Sbjct: 3840309 ccggcggcggcgcggggcccgccg 3840332
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>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0567G03
          Length = 196834

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   ctcgccggcggcggcgcggg 175
             ||||||||||||||||||||
Sbjct: 27675 ctcgccggcggcggcgcggg 27656
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>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0513E02
          Length = 141477

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    ctcgccggcggcggcgcggg 175
              ||||||||||||||||||||
Sbjct: 104991 ctcgccggcggcggcgcggg 104972
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>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   cgcctcgccggcggcggcgc 172
             ||||||||||||||||||||
Sbjct: 57196 cgcctcgccggcggcggcgc 57215
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   cgcctcgccggcggcggcgc 172
             ||||||||||||||||||||
Sbjct: 57749 cgcctcgccggcggcggcgc 57768
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    cgcctcgccggcggcggcgc 172
              ||||||||||||||||||||
Sbjct: 137778 cgcctcgccggcggcggcgc 137797
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0081C13
          Length = 144624

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    gatcgccgcgccgacgcggg 90
             ||||||||||||||||||||
Sbjct: 72310 gatcgccgcgccgacgcggg 72291
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>dbj|AK100945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138G14, full
           insert sequence
          Length = 2850

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 372 cgcctcgccggcggcggcgc 391
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>dbj|AK070645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061L14, full
           insert sequence
          Length = 1666

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 286 cgcctcgccggcggcggcgc 267
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>dbj|AK069453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020J18, full
           insert sequence
          Length = 1412

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 cgcctcgccggcggcggcgc 172
           ||||||||||||||||||||
Sbjct: 258 cgcctcgccggcggcggcgc 239
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gccgccaagttggcgccgca 139
               ||||||||||||||||||||
Sbjct: 1649577 gccgccaagttggcgccgca 1649558



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gccgccaagttggcgccgca 139
               ||||||||||||||||||||
Sbjct: 1449356 gccgccaagttggcgccgca 1449337



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    gccgccaagttggcgccgca 139
              ||||||||||||||||||||
Sbjct: 582641 gccgccaagttggcgccgca 582660
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gccgccaagttggcgccgca 139
               ||||||||||||||||||||
Sbjct: 3499405 gccgccaagttggcgccgca 3499386



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     gccgccaagttggcgccgca 139
               ||||||||||||||||||||
Sbjct: 3428300 gccgccaagttggcgccgca 3428319



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 120     gccgccaagttggcgccgca 139
               ||||||||||||||||||||
Sbjct: 2048691 gccgccaagttggcgccgca 2048710



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     gccgccaagttggcgccgca 139
               ||||||||||||||||||||
Sbjct: 1590023 gccgccaagttggcgccgca 1590004
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>emb|AJ628421.2| Micromonospora olivasterospora fortimicin biosynthesis gene cluster,
             strain DSM 43868
          Length = 47238

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 159   gccggcggcggcgcggggtccgccgccg 186
             |||||||||||  |||||||||||||||
Sbjct: 10068 gccggcggcggaccggggtccgccgccg 10041
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 150     cagcgcctcgccggcggcggcgcg 173
               ||||| ||||||||||||||||||
Sbjct: 5920171 cagcgtctcgccggcggcggcgcg 5920194



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 239     catggcgcggtggctgcagt 258
               ||||||||||||||||||||
Sbjct: 3555897 catggcgcggtggctgcagt 3555878
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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
              complete sequence
          Length = 160989

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 147    tcgcagcgcctcgccggcggcggc 170
              |||| |||||||||||||||||||
Sbjct: 156393 tcgcggcgcctcgccggcggcggc 156416
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>dbj|AB006532.1| Homo sapiens RecQ4 mRNA for DNA helicase, complete cds
          Length = 3627

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 tggaggcggcgccggaggag 354
           ||||||||||||||||||||
Sbjct: 92  tggaggcggcgccggaggag 111
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>dbj|AB026546.1| Homo sapiens gene for RECQL4 helicase, complete cds
          Length = 6462

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 tggaggcggcgccggaggag 354
           ||||||||||||||||||||
Sbjct: 241 tggaggcggcgccggaggag 260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,999,573
Number of Sequences: 3902068
Number of extensions: 2999573
Number of successful extensions: 88009
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82092
Number of HSP's gapped (non-prelim): 5917
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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