ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl01b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LRP3_HUMAN (O75074) Low-density lipoprotein receptor-related pro... 36 0.044
2VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP) 31 1.4
3ADPGK_HUMAN (Q9BRR6) ADP-dependent glucokinase (EC 2.7.1.147) (A... 31 1.9
4PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.... 31 1.9
5SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal t... 31 1.9
6TLX2_HUMAN (O43763) T-cell leukemia homeobox protein 2 (Homeobox... 30 2.4
7MYSA_DROME (P05661) Myosin heavy chain, muscle 30 2.4
8B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein 3-beta-g... 30 2.4
9FYB_HUMAN (O15117) FYN-binding protein (FYN-T-binding protein) (... 30 3.2
10TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome p... 30 4.1
11RPOA_PRRSR (Q9WJB2) Replicase polyprotein 1ab (ORF1ab polyprotei... 30 4.1
12WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp) 29 5.4
13CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48) 29 5.4
14HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4) 29 5.4
15RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X ... 29 5.4
16YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific... 29 7.1
17SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I) 29 7.1
18PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a ... 29 7.1
19C1QB_RAT (P31721) Complement C1q subcomponent subunit B precursor 29 7.1
20ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 pro... 29 7.1
21VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription fact... 29 7.1
22CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor 29 7.1
23GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1) 28 9.2
24WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family mem... 28 9.2
25MYBPH_MOUSE (P70402) Myosin-binding protein H (MyBP-H) (H-protein) 28 9.2
26BSN_MOUSE (O88737) Bassoon protein 28 9.2
27PAK4_MOUSE (Q8BTW9) Serine/threonine-protein kinase PAK 4 (EC 2.... 28 9.2
28NKX24_HUMAN (Q9H2Z4) Homeobox protein Nkx-2.4 (Homeobox protein ... 28 9.2
29CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor 28 9.2
30SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein 28 9.2
31VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP) 28 9.2
32RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2 28 9.2
33CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment) 28 9.2

>LRP3_HUMAN (O75074) Low-density lipoprotein receptor-related protein 3|
           precursor (hLRp105)
          Length = 770

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 20/46 (43%), Positives = 22/46 (47%)
 Frame = +3

Query: 93  GQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPAPTSPRGETLAAAD 230
           GQI L+T +      L    L P  G AP PPAP    G T AA D
Sbjct: 620 GQIPLLTAARPSQTVLGDGFLQPAPGAAPDPPAPLMDTGSTRAAGD 665



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>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 379

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
 Frame = +3

Query: 36  GEPHPNRVPSWKGSGGLGAGQISLV-------TTSVHRHLPLAPSSLAPRVGGAPCPPAP 194
           G P P  +P+W    G    ++          +  + R +  A    AP  GG P PP P
Sbjct: 116 GPPPPPALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGP 175

Query: 195 TSPRG 209
             P G
Sbjct: 176 PPPPG 180



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>ADPGK_HUMAN (Q9BRR6) ADP-dependent glucokinase (EC 2.7.1.147) (ADPGK) (ADP-GK)|
           (RbBP-35)
          Length = 497

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
 Frame = +3

Query: 66  WKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRV------GGAPCPPAPTSPRGETLAAA 227
           W+GS    AG ++L    V    P  P S    +      G AP PP P SP G   AA 
Sbjct: 4   WRGSAY--AGFLALAVGCVFLLEPELPGSALRSLWSSLCLGPAPAPPGPVSPEGRLAAAW 61

Query: 228 D 230
           D
Sbjct: 62  D 62



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>PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 591

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 16/80 (20%)
 Frame = +3

Query: 21  ARPSHGEPHPNRVPSWKGSGGLGAGQISLVTT---------------SVHRHLP-LAPSS 152
           +R + GEPH +  P+   +GGL   Q S  ++                 H   P LAP +
Sbjct: 217 SRGAQGEPH-DVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPA 275

Query: 153 LAPRVGGAPCPPAPTSPRGE 212
             P     P PP P SP+ E
Sbjct: 276 CTPAAPAVPGPPGPRSPQRE 295



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>SAM68_MOUSE (Q60749) KH domain-containing, RNA-binding, signal|
           transduction-associated protein 1 (p21 Ras
           GTPase-activating protein-associated p62)
           (GAP-associated tyrosine phosphoprotein p62)
           (Src-associated in mitosis 68 kDa protein) (Sam68) (p68)
          Length = 443

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 24/66 (36%), Positives = 27/66 (40%)
 Frame = +3

Query: 3   HPAFALARPSHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPC 182
           HP+  L  PS   P P+R P   G G  G  + S  T       P  P   A  VG AP 
Sbjct: 27  HPSVRLT-PSRPSPLPHR-PRGGGGGPRGGARASPATQPPPLLPPSTPGPDATVVGSAPT 84

Query: 183 PPAPTS 200
           P  P S
Sbjct: 85  PLLPPS 90



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>TLX2_HUMAN (O43763) T-cell leukemia homeobox protein 2 (Homeobox protein|
           Hox-11L1) (Neural crest homeobox protein)
          Length = 284

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 72  GSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPAPTSPRG 209
           GS G+G G +  +    HR LP+ P +     GGAP  P P+   G
Sbjct: 71  GSSGVGPGGV--IRVPAHRPLPVPPPA-----GGAPAVPGPSGLGG 109



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>MYSA_DROME (P05661) Myosin heavy chain, muscle|
          Length = 1962

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 14/60 (23%)
 Frame = +2

Query: 305  AADNDLEEKLKDVGARL--------------QEAPPDSEGLLKLLDDVEKNLMNVEQSPA 442
            A  NDLE +L+D+  RL              ++A  +  GL K ++D+E N+   EQ  A
Sbjct: 909  AQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKA 968



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>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein|
           3-beta-glucuronosyltransferase 2 (EC 2.4.1.135)
           (Beta-1,3-glucuronyltransferase 2)
           (Glucuronosyltransferase-S) (GlcAT-S)
           (UDP-glucuronosyltransferase-S) (GlcAT-D)
          Length = 329

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = -3

Query: 196 VGAGGHGAPPTRGARLEGARGRWRWTEVVTREICPAPNPPLP 71
           VG GG   PP RG    G    W           P P PPLP
Sbjct: 45  VGRGGARLPPRRGGPDSGPGRGWEKRNESRPHARPRPEPPLP 86



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>FYB_HUMAN (O15117) FYN-binding protein (FYN-T-binding protein) (FYB-120/130)|
           (p120/p130) (SLP-76-associated phosphoprotein)
           (SLAP-130)
          Length = 783

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
 Frame = +3

Query: 6   PAFALARPSHGEPHPNRVPS------WKGSGG--LGAGQISLVTTSVHRHLPLAPSSLAP 161
           P F L  P    P PNR P+       K S G     GQ S  TTS+    P  P+S  P
Sbjct: 349 PLFTLGPPP---PKPNRPPNVDLTKFHKTSSGNSTSKGQTSYSTTSLPPPPPSHPASQPP 405

Query: 162 RVGGAPC-PPAPTSP 203
                P  PP P+ P
Sbjct: 406 LPASHPSQPPVPSLP 420



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>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)|
          Length = 1411

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 138 LAPSSLAPRVGGAPCPPAPTSP 203
           LAP+  +PR G AP PP  T P
Sbjct: 823 LAPAKESPRKGAAPTPPGKTGP 844



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 141 APSSLAPRVGGAPCPPAPTSP 203
           AP+  +PR G AP PP  T P
Sbjct: 299 APAKESPRKGAAPAPPGKTGP 319



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>RPOA_PRRSR (Q9WJB2) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
           Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha
           papain-like cysteine proteinase (EC 3.4.22.-)
           (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase
           (EC 3.4.22.-) (PCP
          Length = 3960

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 2   PPCLCPRKAEPRRAAPKSRPVVERERGVGS 91
           PP + PRK +P ++ P+ +PV    R VGS
Sbjct: 816 PPKVQPRKTKPVKSLPERKPVPAPRRKVGS 845



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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 13/68 (19%)
 Frame = +3

Query: 39  EPHPNRVPSWKGSGGLGAG-------------QISLVTTSVHRHLPLAPSSLAPRVGGAP 179
           EP P   P  +G GG G G             +  +V ++  R  PL P  +    GGAP
Sbjct: 313 EPLPPPPPPCRGGGGGGGGGGGGGGGGGGQPLRPPVVGSNKGRSGPLPPVPM----GGAP 368

Query: 180 CPPAPTSP 203
            PP P  P
Sbjct: 369 PPPTPRGP 376



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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = +3

Query: 51  NRVPSWKGSGGLGAGQISLVTTSVHRHLPLAP-----SSLAPRVGGAPCPPAPTSP 203
           N+ PS  G+  +G GQ    T      +P A      + L P+    PCPP   SP
Sbjct: 797 NQFPSSSGAMSVGMGQPPAQTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSP 852



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>HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)|
          Length = 289

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 21/64 (32%), Positives = 23/64 (35%)
 Frame = +3

Query: 12  FALARPSHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPA 191
           F  A P H  PHP+  P   G GG G GQ          +      S       AP PP 
Sbjct: 63  FPHAHP-HPHPHPSPPPGCGGGGGPGPGQ---------DYFHAGAGSPTAAYQAAPPPPH 112

Query: 192 PTSP 203
           P  P
Sbjct: 113 PPPP 116



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>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
          Length = 533

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 132 LPLAPSSLAPRVGGAPCPPAPTSP 203
           LPL PSS AP +GG+  PP P  P
Sbjct: 103 LPLPPSS-APTLGGSGAPPPPPMP 125



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>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding|
           protein) (FRGY2 homolog)
          Length = 360

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/58 (31%), Positives = 22/58 (37%)
 Frame = +3

Query: 48  PNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPAPTSPRGETLA 221
           P +     G GG GA       T +H   P  P + A    G P PPA +      LA
Sbjct: 37  PQKAGGGAGGGG-GAASGPAAGTPLHAPGPRTPGNQATAASGTPAPPARSQADKPVLA 93



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>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)|
          Length = 706

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = +3

Query: 27  PSHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRH-LPLAPSSLAPRVGGAPCPPAPTSP 203
           P  G P P R+PS   +    A Q + VT    R   P+A    AP     P  P+P   
Sbjct: 498 PPAGSPLPQRLPSPTAAPQQSASQATPVTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQ 557

Query: 204 RG 209
            G
Sbjct: 558 AG 559



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>PIN3A_ORYSA (Q5VP70) Probable auxin efflux carrier component 3a (OsPIN3a)|
          Length = 618

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 165 VGGAPCPPAPTSPRGETLAAADL 233
           VGG P PP P + RG +  A++L
Sbjct: 257 VGGGPPPPTPAAVRGSSFGASEL 279



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>C1QB_RAT (P31721) Complement C1q subcomponent subunit B precursor|
          Length = 253

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +3

Query: 30  SHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPR--VG--GAPCPPAPT 197
           S G+P    +   KG  GL AG    +       +P  P  + P+  VG  GAP PP P 
Sbjct: 47  SDGKPGTPGIKGEKGLPGL-AGDHGELGEKGDAGIPGIPGKVGPKGPVGPKGAPGPPGPR 105

Query: 198 SPRG 209
            P+G
Sbjct: 106 GPKG 109



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>ANC1_CAEEL (Q9N4M4) Nuclear anchorage protein 1 (Anchorage 1 protein) (Nesprin|
            homolog)
          Length = 8545

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +2

Query: 299  EAAADNDLEEKLKDVGARLQEAPPDSEGLL----KLLDDVEKNLMNVE 430
            +AAA N++  KL+ V  +LQ  P +    L    +LL+DVE    N+E
Sbjct: 7926 KAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLE 7973



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +2

Query: 299  EAAADNDLEEKLKDVGARLQEAPPDSEGLL----KLLDDVEKNLMNVE 430
            +AAA N++  KL+ V  +LQ  P +    L    +LL+DVE    N+E
Sbjct: 7023 KAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLE 7070



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +2

Query: 299  EAAADNDLEEKLKDVGARLQEAPPDSEGLL----KLLDDVEKNLMNVE 430
            +AAA N++  KL+ V  +LQ  P +    L    +LL+DVE    N+E
Sbjct: 6120 KAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLE 6167



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +2

Query: 299  EAAADNDLEEKLKDVGARLQEAPPDSEGLL----KLLDDVEKNLMNVE 430
            +AAA N++  KL+ V  +LQ  P +    L    +LL+DVE    N+E
Sbjct: 5217 KAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLE 5264



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +2

Query: 299  EAAADNDLEEKLKDVGARLQEAPPDSEGLL----KLLDDVEKNLMNVE 430
            +AAA N++  KL+ V  +LQ  P +    L    +LL+DVE    N+E
Sbjct: 4263 KAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLE 4310



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +2

Query: 299  EAAADNDLEEKLKDVGARLQEAPPDSEGLL----KLLDDVEKNLMNVE 430
            +AAA N++  KL+ V  +LQ  P +    L    +LL+DVE    N+E
Sbjct: 3360 KAAAVNEIAPKLQLVSQQLQSVPQEVPASLDEQKQLLEDVENQKHNLE 3407



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>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)|
           (Retinal inner nuclear layer homeobox protein)
           (Homeodomain protein RINX)
          Length = 365

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +3

Query: 135 PLAPSSLAPRVGGAPCPPAPTSPRGETLAAAD 230
           P  P  LAPR  G P P A    R E+++ +D
Sbjct: 111 PEGPEPLAPRFPGRPPPSAARQKRSESVSTSD 142



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>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 13/72 (18%)
 Frame = +3

Query: 36  GEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPR--------VG-----GA 176
           G P P  +P  KG  G   G +  +     R  P  P +  P         VG     G 
Sbjct: 145 GNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGIPGTPGPPGLPGLQGPVGPPGFTGP 204

Query: 177 PCPPAPTSPRGE 212
           P PP P  P GE
Sbjct: 205 PGPPGPPGPPGE 216



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>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)|
          Length = 620

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 3   HPAFALARPSHGEPHPNRVPSWKGS-GGLGAGQISLVTTSVHR--HLPLAPSSLAPRVGG 173
           HP  A     H   H + +P  + +  GLG G +S + + +      PL PSS +   GG
Sbjct: 429 HPLDATTSSHH---HLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLPPSSQSHSPGG 485

Query: 174 APCPPAPTSP 203
            P P  P+ P
Sbjct: 486 QPFPTLPSKP 495



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>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
          Length = 497

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 135 PLAPSSLAPRVGGAPCPPAPTSPRG 209
           P+ P  L+   GGAP PP P  P G
Sbjct: 374 PMPPPPLSQPSGGAPPPPPPPPPPG 398



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>MYBPH_MOUSE (P70402) Myosin-binding protein H (MyBP-H) (H-protein)|
          Length = 483

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/70 (22%), Positives = 28/70 (40%)
 Frame = +3

Query: 15  ALARPSHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPAP 194
           +++ P    P P +VP+ + SG + A + +    +     P A    AP     P    P
Sbjct: 10  SVSTPEETAPEPAKVPTTEPSGEVAASESTGQEQAPEPQKPQAQDPAAPAASAMPAATKP 69

Query: 195 TSPRGETLAA 224
             P  +  +A
Sbjct: 70  EPPSEDVPSA 79



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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 11/85 (12%)
 Frame = +3

Query: 6    PAFALAR---PSHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSS-------- 152
            P F +A    P+ G  +  +  + K SG  G  +  L    V R  P + ++        
Sbjct: 2268 PRFPIASSVPPAEGPVYLGKPAATKASGAGGPPRPEL-PAGVAREEPFSTTAPAVIKEAP 2326

Query: 153  LAPRVGGAPCPPAPTSPRGETLAAA 227
            +AP  G AP PP    P GE  A +
Sbjct: 2327 VAPAPGPAPAPPPGQKPAGEAAAGS 2351



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>PAK4_MOUSE (Q8BTW9) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 593

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 18/81 (22%)
 Frame = +3

Query: 24  RPSHGEPHPNRVPSWKGSGGLGAGQISLVT------------------TSVHRHLPLAPS 149
           R + GEPH    P+   + GL A Q S  +                   S  +  P A +
Sbjct: 218 RGAQGEPH-TMAPNGPSATGLAAPQSSSSSRPPTRARGAPSPGVLGPHASEPQLAPPARA 276

Query: 150 SLAPRVGGAPCPPAPTSPRGE 212
             AP V  AP PP P SP+ E
Sbjct: 277 LAAPAVPPAPGPPGPRSPQRE 297



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>NKX24_HUMAN (Q9H2Z4) Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4)|
           (Homeobox protein NK-2 homolog D)
          Length = 353

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 83  PPAPFPRRDAIWVRLSVARPCEG 15
           PP P PRR A+ V +   +PC+G
Sbjct: 267 PPPPSPRRAAVPVLVKDGKPCQG 289



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>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor|
          Length = 689

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 19/59 (32%), Positives = 20/59 (33%)
 Frame = +3

Query: 36  GEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPAPTSPRGE 212
           GEP P  +P  KG  GL                P  P    P   G P PP P    GE
Sbjct: 90  GEPGPMGIPGVKGQPGL----------------PGPPGLPGPGFAGPPGPPGPVGLPGE 132



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>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein|
          Length = 977

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 24/74 (32%), Positives = 31/74 (41%)
 Frame = +3

Query: 6   PAFALARPSHGEPHPNRVPSWKGSGGLGAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCP 185
           P+F    PSH     +  PS   S G        VT +   ++P     + P  GGAP P
Sbjct: 519 PSFTSGVPSHAPVSGS--PSTPRSSGP-------VTATSSLYIPAPSRPVTP--GGAPEP 567

Query: 186 PAPTSPRGETLAAA 227
           PAP S    T  A+
Sbjct: 568 PAPPSAAAMTSTAS 581



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>VASP_MOUSE (P70460) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 374

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/61 (27%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
 Frame = +3

Query: 36  GEPHPNRVPSWKGSGGLGAGQISLVTTS---VHRHLPLAPSSLAPRVGGAPCPPAPTSPR 206
           G P     P+W    G    ++         + R +  A    AP  GG P PP P  P 
Sbjct: 116 GPPPAPAPPAWSAQNGPSPEELEQQKRQPEHMERRVSNAGGPPAPPAGGPPPPPGPPPPP 175

Query: 207 G 209
           G
Sbjct: 176 G 176



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>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2|
          Length = 1516

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 22/56 (39%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = -3

Query: 193  GAGGHG---APPTRGARLEGARGRWRWTEVVTREICPAPNPPLPFHDGTRFGCGSP 35
            GAGG G   APP R   +EGA            E CPA    L    G  F  GSP
Sbjct: 1305 GAGGGGPPQAPPPREGVVEGA------------EACPASEEALGRERGWPFWMGSP 1348



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>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)|
          Length = 210

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
 Frame = +3

Query: 36  GEPHPNRVPSWKGSGGL--GAGQISLVTTSVHRHLPLAPSSLAPRVGGAPCPPAPTSPRG 209
           G P P   P   G  G    AGQ            P A +   P V G P PP PT P G
Sbjct: 92  GPPGPKGPPGPPGKAGAPGAAGQ------------PGANAPSEPLVPGPPGPPGPTGPEG 139


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,201,715
Number of Sequences: 219361
Number of extensions: 929362
Number of successful extensions: 5823
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5788
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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