ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl01a11 |
|---|---|
| Clone Library Name | barley_pub |
>PI3K2_SOYBN (P42348) Phosphatidylinositol 3-kinase, nodule isoform (EC| 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-1) Length = 812 Score = 139 bits (350), Expect = 5e-33 Identities = 70/107 (65%), Positives = 79/107 (73%), Gaps = 8/107 (7%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRV--LQAPIPPPAQDGL------DKKASELFVECKLYIDGIQFG 377 EFRFFLSCDIS+P+TFRV L+ +P P L D + +ELFVEC LYIDG FG Sbjct: 5 EFRFFLSCDISVPVTFRVERLEGNLPLPKSPDLENNAPTDNRTTELFVECALYIDGAPFG 64 Query: 378 LPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGEG 518 LP+ TRLES GP YCWNELITL TKYRDLT +QL FTVWD+S GEG Sbjct: 65 LPMRTRLESLGPSYCWNELITLTTKYRDLTAQSQLTFTVWDLSHGEG 111
>PI3K1_SOYBN (P42347) Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137)| (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) Length = 814 Score = 139 bits (350), Expect = 5e-33 Identities = 71/109 (65%), Positives = 78/109 (71%), Gaps = 10/109 (9%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRVLQA----PIPPPAQDGLDKKA------SELFVECKLYIDGIQ 371 EFRFFLSCDIS+P+TFRV + P+P P L+ A ELFVEC LYIDG Sbjct: 5 EFRFFLSCDISVPVTFRVERLEGNLPLPNPKSPDLETNAPTENRTKELFVECALYIDGAP 64 Query: 372 FGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGEG 518 FGLP TRLESSGP YCWNELITL TKYRDLT +QL FTVWD+S GEG Sbjct: 65 FGLPTRTRLESSGPSYCWNELITLTTKYRDLTAQSQLTFTVWDLSHGEG 113
>PI3K_ARATH (P42339) Phosphatidylinositol 3-kinase VPS34 (EC 2.7.1.137)| (PtdIns-3-kinase VSP34) (PI3-kinase VPS34) (PI3K VPS34) (AtVPS34) Length = 814 Score = 127 bits (320), Expect = 1e-29 Identities = 61/106 (57%), Positives = 79/106 (74%), Gaps = 8/106 (7%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRVLQA----PIPPPAQDGL----DKKASELFVECKLYIDGIQFG 377 EFRFFLSCDI+ P+TFR+ + P+ + G+ ++K EL++EC LYIDG FG Sbjct: 5 EFRFFLSCDINSPVTFRIEKLDGNLPVKKSSDSGVVSIAEEKKPELYIECALYIDGAPFG 64 Query: 378 LPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGE 515 LP+ TRL+++GPPYCWNELITL +KYRDLT +QLA TVWDVS G+ Sbjct: 65 LPMRTRLKTTGPPYCWNELITLSSKYRDLTAHSQLAITVWDVSCGK 110
>PK3C3_PIG (Q5D891) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC| 2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3) (PI3K type 3) (Phosphoinositide-3-kinase class 3) Length = 887 Score = 57.4 bits (137), Expect = 2e-08 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 14/116 (12%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRV-----------LQAPIPPPAQ--DGL-DKKASELFVECKLYI 359 +F + SCD+ + + ++ +A + P GL + S+L+V C+++ Sbjct: 6 KFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFA 65 Query: 360 DGIQFGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGEGKSV 527 +G LPV T ++ + WNE + L KY DL AQ+A T+WDV G GK+V Sbjct: 66 EGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDV-YGPGKAV 120
>PK3C3_HUMAN (Q8NEB9) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC| 2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3) (PI3K type 3) (Phosphoinositide-3-kinase class 3) (Phosphatidylinositol 3-kinase p100 subunit) Length = 887 Score = 57.4 bits (137), Expect = 2e-08 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 14/116 (12%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRV-----------LQAPIPPPAQ--DGL-DKKASELFVECKLYI 359 +F + SCD+ + + ++ +A + P GL + S+L+V C+++ Sbjct: 6 KFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFA 65 Query: 360 DGIQFGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGEGKSV 527 +G LPV T ++ + WNE + L KY DL AQ+A T+WDV G GK+V Sbjct: 66 EGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDV-YGPGKAV 120
>PK3C3_XENLA (Q6AZN6) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC| 2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3) (PI3K type 3) (Phosphoinositide-3-kinase class 3) Length = 886 Score = 56.2 bits (134), Expect = 5e-08 Identities = 27/67 (40%), Positives = 41/67 (61%) Frame = +3 Query: 327 SELFVECKLYIDGIQFGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVS 506 S+L+V C+++ +G LPV T ++ + WNE + L KY DL AQ+A T+WDV Sbjct: 55 SDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYADLPRSAQVALTIWDV- 113 Query: 507 SGEGKSV 527 G GK++ Sbjct: 114 YGPGKAI 120
>PK3C3_RAT (O88763) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC| 2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3) (PI3K type 3) (Phosphoinositide-3-kinase class 3) Length = 887 Score = 55.5 bits (132), Expect = 9e-08 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRV-----------LQAPIPPPAQ--DGL-DKKASELFVECKLYI 359 +F + SCD+ + + ++ +A + P GL + S+L+V C+++ Sbjct: 6 KFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFA 65 Query: 360 DGIQFGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGEGKSV 527 +G LPV T + + WNE + L KY DL AQ+A T+WDV G G++V Sbjct: 66 EGKPLALPVRTSYKPFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDV-YGPGRAV 120
>PK3C3_MOUSE (Q6PF93) Phosphatidylinositol 3-kinase catalytic subunit type 3 (EC| 2.7.1.137) (PtdIns-3-kinase type 3) (PI3-kinase type 3) (PI3K type 3) (Phosphoinositide-3-kinase class 3) Length = 887 Score = 55.5 bits (132), Expect = 9e-08 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%) Frame = +3 Query: 222 EFRFFLSCDISLPLTFRV-----------LQAPIPPPAQ--DGL-DKKASELFVECKLYI 359 +F + SCD+ + + ++ +A + P GL + S+L+V C+++ Sbjct: 6 KFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLKFSGLYQETCSDLYVTCQVFA 65 Query: 360 DGIQFGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSSGEGKSV 527 +G LPV T ++ + WNE + L KY DL AQ+A T+WDV G G +V Sbjct: 66 EGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDV-YGPGSAV 120
>PI3K4_DICDI (P54676) Phosphatidylinositol 3-kinase VPS34-like (EC 2.7.1.137)| (PI3-kinase) (PtdIns-3-kinase) (PI3K) Length = 816 Score = 38.1 bits (87), Expect = 0.015 Identities = 18/60 (30%), Positives = 28/60 (46%) Frame = +3 Query: 330 ELFVECKLYIDGIQFGLPVNTRLESSGPPYCWNELITLCTKYRDLTPLAQLAFTVWDVSS 509 +L++ C LY DG Q +T W+E I K++DL + T+WD+ S Sbjct: 60 DLYITCTLYSDGKQLSTSEHTSYNPFSVSNKWDETIIFPLKHQDLPFDTMIVITIWDIYS 119
>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)| Length = 5179 Score = 34.3 bits (77), Expect = 0.22 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 38 TPPPRRVPHKKTSSPAGPLRAPRFPTSARRTSPP 139 TPPP P T++P+ P P PT+ T PP Sbjct: 1463 TPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPP 1496
>HASP_HUMAN (Q8TF76) Serine/threonine-protein kinase Haspin (EC 2.7.11.1)| (Haploid germ cell-specific nuclear protein kinase) (H-Haspin) (Germ cell-specific gene 2 protein) Length = 798 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 6/45 (13%) Frame = +2 Query: 20 RDEAARTPPPRRV-----PHKKTSSPAGPLRAPRFPT-SARRTSP 136 R + T PRR+ P +K S+P GPLR P FP+ + R SP Sbjct: 104 RARPSLTVTPRRLGLRARPPQKCSTPCGPLRLPPFPSRDSGRLSP 148
>CWC22_CRYNE (Q5KFX4) Pre-mRNA-splicing factor CWC22| Length = 831 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +2 Query: 17 SRDEAARTPPPRRVPHK-KTSSPAGPLRAPRFPTSARRTSPP 139 S D + +PPPRR + + SP+ P R R+ +R SPP Sbjct: 724 SSDSRSPSPPPRRRQYSDEPRSPSPPPRRRRYSDDSRSPSPP 765 Score = 30.4 bits (67), Expect = 3.1 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 17 SRDEAARTPPPRRVPHKKTSSPAGPLRAPRFPTSARRTSPP 139 S D + +PPPRR + SP+ P R+ +R SPP Sbjct: 771 SGDSRSPSPPPRRRYADDSRSPSPPPHRRRYSDDSRSPSPP 811 Score = 29.3 bits (64), Expect = 7.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +2 Query: 32 ARTPPPRRVPHKKTS-SPAGPLRAPRFPTSARRTSPP 139 +R+PPPRR + S SP+ P R ++ R SPP Sbjct: 713 SRSPPPRRRRYSSDSRSPSPPPRRRQYSDEPRSPSPP 749 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +2 Query: 23 DEAARTPPPRRVPHKKTS-SPAGPLRAPRFPTSARRTSPP 139 D + +PPP R + S SP+ P R R+ ++R SPP Sbjct: 788 DSRSPSPPPHRRRYSDDSRSPSPPPRRRRYSDNSRSPSPP 827
>GRASP_HUMAN (Q7Z6J2) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) Length = 395 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +2 Query: 20 RDEAARTPPPRRVPHKKTSSPAGPLRAPRFPTSARRTSPPA 142 ++EAA TP P +PA P+ P P +A PPA Sbjct: 12 KEEAAATPDPAARTPDSEVAPAAPVPTPGPPAAAATPGPPA 52
>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1| Length = 888 Score = 30.0 bits (66), Expect = 4.1 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 17 SRDEAARTPPPRRVPHKKTSSPAGPLRAPRFPTSARRTSPPA 142 S+ + +PPP K+ SSPA R+P + R+ SPP+ Sbjct: 624 SKRRVSHSPPP-----KQRSSPAAKRRSPSISSKHRKGSPPS 660
>ACHA4_PANTR (Q5IS77) Neuronal acetylcholine receptor protein, alpha-4 subunit| precursor Length = 627 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +1 Query: 16 EPRRGSPHATSPPCSPQKNLLAGGTAPCP--SVPHLRSP 126 E + SPHA+ PC P A G A SV H+ SP Sbjct: 436 EAEKASPHASPGPCRPPHGTQAPGLAKARSLSVQHMSSP 474
>NEDD4_HUMAN (P46934) E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-)| Length = 1000 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/38 (44%), Positives = 18/38 (47%) Frame = +2 Query: 29 AARTPPPRRVPHKKTSSPAGPLRAPRFPTSARRTSPPA 142 AAR P R PH + A P P P SARR PA Sbjct: 4 AARAHPTRAPPHALPTPRAPPRAPPPSPRSARRRPFPA 41
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = +2 Query: 2 VSFSASRDEAARTPPPRRVPHKKTSSPAGPLRAPRFPTSA------RRTSPPA 142 +S S+S ++R+ P + P K+TSSP P + R SA R SPPA Sbjct: 355 LSGSSSSSSSSRSRSPPKKPPKRTSSP--PRKTRRLSPSASPPRRRHRPSPPA 405
>K1543_HUMAN (Q9P1Y5) Protein KIAA1543| Length = 1249 Score = 29.3 bits (64), Expect = 7.0 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 26 EAARTPPPRRVPHKKTSSPAGPLRAPRFPTSAR 124 +AA P RRVP + S GP ++PR P R Sbjct: 753 KAASPSPARRVPATRRSPGPGPSQSPRSPKHTR 785
>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1| Length = 917 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%) Frame = +2 Query: 2 VSFSASRDEAARTPPPRRVPHKKTSSPAGPLRAPRFPTSA------RRTSPPA 142 +S S+S ++R+ P + P K+TSSP P + R SA R SPPA Sbjct: 355 LSGSSSSSSSSRSRSPPKKPPKRTSSP--PRKTRRLSPSASPPRRRHRPSPPA 405
>RDRP_BDV (P52639) Large structural protein (L protein) (P180) [Includes:| RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 1711 Score = 28.9 bits (63), Expect = 9.1 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +1 Query: 40 ATSPPCSPQKNLLAGGTAPCPSVPHLRSPD 129 A P + K + GG APCPS LR D Sbjct: 1662 ARHPWSADLKRITVGGRAPCPSAARLRDED 1691
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +2 Query: 14 ASRDEAARTPPPRRVPHKKTSSPAGPLRAPRFPTSARRTSPPAV 145 A + A+ PPP+ P P PL P+ S PPAV Sbjct: 2535 AQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPAV 2578 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,946,236 Number of Sequences: 219361 Number of extensions: 1145458 Number of successful extensions: 4760 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4258 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4743 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
