Clone Name | bastl01a09 |
---|---|
Clone Library Name | barley_pub |
>NHS_HUMAN (Q6T4R5) Nance-Horan syndrome protein (Congenital cataracts and| dental anomalies protein) Length = 1630 Score = 31.6 bits (70), Expect = 1.2 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 325 YRATWEQQASFFRRSVRLRPPKALKTSAQLAREMQRLRQMAKEAHDRKQRYAA 483 YRA W QQ + F + R PP + + +Q LR+ + DR+++ AA Sbjct: 203 YRAPWHQQRNIFLPATR--PPCVEELHRHARQSLQALRREHRSRSDRREQRAA 253
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 30.4 bits (67), Expect = 2.6 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +1 Query: 340 EQQASFFRRSVRLRPPKALKTSAQLAREMQRLRQMAKEAHDR 465 E+ S FR++ R R +A +T+A LAR++ + AHD+ Sbjct: 636 ERIGSLFRKA-RTREARATRTNASLARDLNAIEAAVHAAHDK 676
>MAAY3_SCHCO (P37934) Mating-type protein A-alpha Y3| Length = 926 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = -1 Query: 395 SALGGRSRTLRRKKDACCSQVARYARPSMQSSMPWASSRRS 273 SA +SRT R+ +D+ S VA PS+ S+ SSRRS Sbjct: 684 SATSRKSRTSRKPRDSSASSVASARTPSLSST----SSRRS 720
>FUT4_PANTR (Q659K9) Alpha-(1,3)-fucosyltransferase (EC 2.4.1.-) (Galactoside| 3-L-fucosyltransferase) (Fucosyltransferase 4) (FUCT-IV) (Fuc-TIV) Length = 405 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -2 Query: 394 APWGAEAGRSGGRRTPAAPRWRDTRG 317 APWG+ +GGRR RWR RG Sbjct: 3 APWGSPTAAAGGRR-----RWRRGRG 23
>PDXJ_SHEON (Q8EH78) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 245 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/23 (47%), Positives = 19/23 (82%) Frame = +1 Query: 397 KTSAQLAREMQRLRQMAKEAHDR 465 KT+ + A+E++R+R+MAK AH + Sbjct: 163 KTADEEAKELERIREMAKYAHGK 185
>SERA_THASE (Q9S1H0) Selenate reductase alpha subunit precursor (EC 1.97.1.9)| (Selenate reductase molybdenum subunit) Length = 918 Score = 28.5 bits (62), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 35 PLHILGQRAERRWRRLFW 88 PL +G+R ER+W+R+ W Sbjct: 134 PLKRVGERGERKWKRISW 151
>CLRA_IDEDE (P60068) Chlorate reductase alpha subunit precursor (EC 1.97.1.1)| (Chlorate reductase molybdenum subunit) Length = 914 Score = 28.5 bits (62), Expect = 9.9 Identities = 9/18 (50%), Positives = 14/18 (77%) Frame = +2 Query: 35 PLHILGQRAERRWRRLFW 88 PL +G+R ER+W+R+ W Sbjct: 130 PLKRVGERGERKWKRISW 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,902,953 Number of Sequences: 219361 Number of extensions: 821171 Number of successful extensions: 3438 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3335 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3437 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)