ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart62h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AMEL_PIG (P45561) Amelogenin precursor (Amelogenin 173A/173B) (L... 28 5.7

>AMEL_PIG (P45561) Amelogenin precursor (Amelogenin 173A/173B) (Leucine-rich|
           amelogenin peptide) (LRAP)
          Length = 189

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 15  PPHPIVPELPKPELPP 62
           P HPI P LP+P LPP
Sbjct: 146 PMHPIQPLLPQPPLPP 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.119    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,711,321
Number of Sequences: 219361
Number of extensions: 95832
Number of successful extensions: 615
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
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