ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart62a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_193122.1| Oryza sativa (japonica cultivar-group), mRNA 206 4e-50
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
3dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
5dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
6dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.089
8gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, comple... 46 0.089
9gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 46 0.089
10gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.089
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
12gb|AF400249.1| Giardia intestinalis axoneme-associated protein G... 42 1.4
13dbj|AK142683.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
14dbj|AK164795.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
15dbj|AK164768.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
16dbj|AK164767.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
17dbj|AK164763.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
18dbj|AK052780.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
19dbj|AK021337.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
20dbj|AK085747.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
21dbj|AK085744.1| Mus musculus 10 days lactation, adult female mam... 42 1.4
22gb|AC074046.9|AC074046 Mus musculus 5 BAC RP23-440C1 (Roswell Pa... 42 1.4
23gb|BC002084.1| Mus musculus casein delta, mRNA (cDNA clone MGC:6... 42 1.4
24ref|NM_009973.1| Mus musculus casein delta (Csnd), mRNA 42 1.4
25emb|V00740.1|MMECAS Mouse messenger RNA for epsilon-casein 42 1.4
26gb|J00379.1|MUSECA mouse epsilon casein mrna 42 1.4
27gb|AC009253.17| Drosophila melanogaster clone BACR24F17, complet... 40 5.5
28ref|NM_116069.3| Arabidopsis thaliana catalytic/ hydrolase AT3G6... 40 5.5
29gb|BC083769.1| Rattus norvegicus cDNA clone IMAGE:7193220 40 5.5
30gb|BC105845.1| Rattus norvegicus cDNA clone MGC:125023 IMAGE:745... 40 5.5
31gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, co... 40 5.5
32ref|XM_590020.2| PREDICTED: Bos taurus similar to DnaJ (Hsp40) h... 40 5.5
33ref|XM_878796.1| PREDICTED: Bos taurus similar to DnaJ (Hsp40) h... 40 5.5
34gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosom... 40 5.5
35gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA 40 5.5
36gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome... 40 5.5
37gb|BT010899.1| Arabidopsis thaliana At3g62040 mRNA, complete cds 40 5.5
38gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome... 40 5.5
39gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome... 40 5.5
40emb|AJ252018.1|DME252018 Drosophila melanogaster mRNA for mitoch... 40 5.5
41gb|AC069077.7| Homo sapiens chromosome 10 clone RP11-418N10, com... 40 5.5
42ref|NM_079969.2| Drosophila melanogaster Aconitase CG9244-RB (Ac... 40 5.5
43gb|AY051705.1| Drosophila melanogaster LD24561 full length cDNA 40 5.5
44gb|AC093099.1| Drosophila melanogaster, chromosome 2L, region 39... 40 5.5
45gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H... 40 5.5
46emb|BX822714.1|CNS0A7T1 Arabidopsis thaliana Full-length cDNA Co... 40 5.5
47gb|AE003669.5| Drosophila melanogaster chromosome 2L, section 78... 40 5.5
48gb|AC006574.1|AC006574 Drosophila melanogaster, chromosome 2R, r... 40 5.5
49gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, comple... 40 5.5 
>ref|NM_193122.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 834

 Score =  206 bits (104), Expect = 4e-50
 Identities = 275/332 (82%)
 Strand = Plus / Plus

                                                                       
Query: 79  ggagccaaatttgactgcctgctgtttgacatggatgacaccatctacccactaagcttg 138
           |||||||| ||||| ||  ||||||||||||||||||| ||  | |||||||| ||||| 
Sbjct: 19  ggagccaagtttgattgtttgctgtttgacatggatgatactctgtacccactgagctta 78

                                                                       
Query: 139 ggaatcaacttagcatgccgcaagaacatccaagactacatgctggacaaacttcagatc 198
           |||||||||||||| |||||||||||||| |||||||| |||||| |||| |||||||| 
Sbjct: 79  ggaatcaacttagcttgccgcaagaacatacaagactatatgctgaacaagcttcagatt 138

                                                                       
Query: 199 gaggagagcctggtccccaagatgtgcctagatttgtacagggaatacggaactacaatg 258
           || |||||||| || ||||||||||| || ||| ||||||||||||  ||||||||||||
Sbjct: 139 gaagagagccttgttcccaagatgtgtcttgatctgtacagggaatttggaactacaatg 198

                                                                       
Query: 259 gccggtctgaaacttatgggctacgatttcgactacgatcaattccacgccagcgtgcac 318
           || || |||||  |  |||| || ||||||||||| ||  | ||||||||  | || || 
Sbjct: 199 gctggactgaaggtcttgggttatgatttcgactatgacgatttccacgcttgtgttcat 258

                                                                       
Query: 319 ggaaaactgccgtacgagaagctgaagccggaccctgtcctgaggagcctgctgatttcg 378
           || | | |||| ||||||||||||||||| ||||||||| |||||  ||| ||| |||| 
Sbjct: 259 ggcacattgccatacgagaagctgaagcctgaccctgtcttgaggcacctactgctttca 318

                                           
Query: 379 atgccacagaggaaaatcatattcaccaactc 410
            ||||||| ||||| || |||||||| |||||
Sbjct: 319 ctgccacaaaggaagattatattcacaaactc 350
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                            
Query: 171      agactacatgctggacaaacttcagatcgaggagagcctggtccccaagatgtgcctaga 230
                |||||| |||||| |||| |||||||| || |||||||| || ||||||||||| || ||
Sbjct: 26275111 agactatatgctgaacaagcttcagattgaagagagccttgttcccaagatgtgtcttga 26275052

                                                       
Query: 231      tttgtacagggaatacggaactacaatggccggtctgaa 269
                | ||||||||||||  |||||||||||||| || |||||
Sbjct: 26275051 tctgtacagggaatttggaactacaatggctggactgaa 26275013



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                            
Query: 106      gacatggatgacaccatctacccactaagcttgggaatcaacttagcatgccgcaagaac 165
                ||||||||||| ||  | |||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 26275266 gacatggatgatactctgtacccactgagcttaggaatcaacttagcttgccgcaagaac 26275207

                       
Query: 166      atccaag 172
                || ||||
Sbjct: 26275206 atacaag 26275200



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                            
Query: 326      tgccgtacgagaagctgaagccggaccctgtcctgaggagcctgctgatttcgatgccac 385
                |||| ||||||||||||||||| ||||||||| |||||  ||| ||| ||||  ||||||
Sbjct: 26274861 tgccatacgagaagctgaagcctgaccctgtcttgaggcacctactgctttcactgccac 26274802

                       
Query: 386      agaggaa 392
                | |||||
Sbjct: 26274801 aaaggaa 26274795
to top
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Minus

                                                                         
Query: 171   agactacatgctggacaaacttcagatcgaggagagcctggtccccaagatgtgcctaga 230
             |||||| |||||| |||| |||||||| || |||||||| || ||||||||||| || ||
Sbjct: 49739 agactatatgctgaacaagcttcagattgaagagagccttgttcccaagatgtgtcttga 49680

                                                    
Query: 231   tttgtacagggaatacggaactacaatggccggtctgaa 269
             | ||||||||||||  |||||||||||||| || |||||
Sbjct: 49679 tctgtacagggaatttggaactacaatggctggactgaa 49641



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 106   gacatggatgacaccatctacccactaagcttgggaatcaacttagcatgccgcaagaac 165
             ||||||||||| ||  | |||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 49894 gacatggatgatactctgtacccactgagcttaggaatcaacttagcttgccgcaagaac 49835

                    
Query: 166   atccaag 172
             || ||||
Sbjct: 49834 atacaag 49828



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 326   tgccgtacgagaagctgaagccggaccctgtcctgaggagcctgctgatttcgatgccac 385
             |||| ||||||||||||||||| ||||||||| |||||  ||| ||| ||||  ||||||
Sbjct: 49489 tgccatacgagaagctgaagcctgaccctgtcttgaggcacctactgctttcactgccac 49430

                    
Query: 386   agaggaa 392
             | |||||
Sbjct: 49429 aaaggaa 49423
to top
>dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026N03, full
           insert sequence
          Length = 1378

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 83  ccaaatttgactgcctgctgtttgacatggatgacaccatctacccactaagct 136
           ||||||| |||||||||||||||||| | ||||||||  | |||||||| ||||
Sbjct: 196 ccaaattcgactgcctgctgtttgacctcgatgacactctgtacccactgagct 249



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 319 ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 361
           |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 432 ggaagactgccctacgagaacatcaagccggaccctgtcctga 474
to top
>dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D05, full
           insert sequence
          Length = 1314

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 83  ccaaatttgactgcctgctgtttgacatggatgacaccatctacccactaagct 136
           ||||||| |||||||||||||||||| | ||||||||  | |||||||| ||||
Sbjct: 195 ccaaattcgactgcctgctgtttgacctcgatgacactctgtacccactgagct 248



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 319 ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 361
           |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 431 ggaagactgccctacgagaacatcaagccggaccctgtcctga 473
to top
>dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103J23, full
           insert sequence
          Length = 1315

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 83  ccaaatttgactgcctgctgtttgacatggatgacac 119
           ||||||| |||||||||||||||||| | ||||||||
Sbjct: 197 ccaaattcgactgcctgctgtttgacctcgatgacac 233
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 319     ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 361
               |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 9175856 ggaagactgccctacgagaacatcaagccggaccctgtcctga 9175898



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 83      ccaaatttgactgcctgctgtttg 106
               ||||||| ||||||||||||||||
Sbjct: 9175207 ccaaattcgactgcctgctgtttg 9175230
to top
>gb|AC093814.3| Homo sapiens BAC clone RP11-362I16 from 4, complete sequence
          Length = 163201

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 386  agaggaaaatcatattcaccaac 408
            |||||||||||||||||||||||
Sbjct: 8784 agaggaaaatcatattcaccaac 8806
to top
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 319    ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 361
              |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 110535 ggaagactgccctacgagaacatcaagccggaccctgtcctga 110493



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     ccaaatttgactgcctgctgtttg 106
              ||||||| ||||||||||||||||
Sbjct: 111184 ccaaattcgactgcctgctgtttg 111161
to top
>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06,
              complete sequence
          Length = 119910

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 319    ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 361
              |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 119036 ggaagactgccctacgagaacatcaagccggaccctgtcctga 119078



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 83     ccaaatttgactgcctgctgtttg 106
              ||||||| ||||||||||||||||
Sbjct: 118387 ccaaattcgactgcctgctgtttg 118410
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 319     ggaaaactgccgtacgagaagctgaagccggaccctgtcctga 361
               |||| |||||| ||||||||  | |||||||||||||||||||
Sbjct: 9173689 ggaagactgccctacgagaacatcaagccggaccctgtcctga 9173731



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 83      ccaaatttgactgcctgctgtttg 106
               ||||||| ||||||||||||||||
Sbjct: 9173040 ccaaattcgactgcctgctgtttg 9173063
to top
>gb|AF400249.1| Giardia intestinalis axoneme-associated protein GASP-180 gene,
            complete cds
          Length = 5504

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 362  ggagcctgctgatttcgatgc 382
            |||||||||||||||||||||
Sbjct: 1368 ggagcctgctgatttcgatgc 1348
to top
>dbj|AK142683.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730048M03
           product:casein delta, full insert sequence
          Length = 920

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 510 aagaacatccaagactacatg 530
to top
>dbj|AK164795.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730045O16
           product:casein delta, full insert sequence
          Length = 758

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 348 aagaacatccaagactacatg 368
to top
>dbj|AK164768.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730018I02
           product:casein delta, full insert sequence
          Length = 761

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 350 aagaacatccaagactacatg 370
to top
>dbj|AK164767.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730018F19
           product:casein delta, full insert sequence
          Length = 762

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 352 aagaacatccaagactacatg 372
to top
>dbj|AK164763.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730017I01
           product:casein delta, full insert sequence
          Length = 745

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 335 aagaacatccaagactacatg 355
to top
>dbj|AK052780.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730001A11
           product:casein delta, full insert sequence
          Length = 759

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 350 aagaacatccaagactacatg 370
to top
>dbj|AK021337.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730043N14
           product:casein delta, full insert sequence
          Length = 756

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 348 aagaacatccaagactacatg 368
to top
>dbj|AK085747.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730040A14
           product:casein delta, full insert sequence
          Length = 760

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 350 aagaacatccaagactacatg 370
to top
>dbj|AK085744.1| Mus musculus 10 days lactation, adult female mammary gland cDNA,
           RIKEN full-length enriched library, clone:D730034M22
           product:casein delta, full insert sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 352 aagaacatccaagactacatg 372
to top
>gb|AC074046.9|AC074046 Mus musculus 5 BAC RP23-440C1 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 182534

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 160   aagaacatccaagactacatg 180
             |||||||||||||||||||||
Sbjct: 24975 aagaacatccaagactacatg 24955
to top
>gb|BC002084.1| Mus musculus casein delta, mRNA (cDNA clone MGC:6256
           IMAGE:3489886), complete cds
          Length = 760

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 333 aagaacatccaagactacatg 353
to top
>ref|NM_009973.1| Mus musculus casein delta (Csnd), mRNA
          Length = 728

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 318 aagaacatccaagactacatg 338
to top
>emb|V00740.1|MMECAS Mouse messenger RNA for epsilon-casein
          Length = 728

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 318 aagaacatccaagactacatg 338
to top
>gb|J00379.1|MUSECA mouse epsilon casein mrna
          Length = 729

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 aagaacatccaagactacatg 180
           |||||||||||||||||||||
Sbjct: 318 aagaacatccaagactacatg 338
to top
>gb|AC009253.17| Drosophila melanogaster clone BACR24F17, complete sequence
          Length = 160280

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ctgccgtacgagaagctgaa 344
              ||||||||||||||||||||
Sbjct: 155169 ctgccgtacgagaagctgaa 155188
to top
>ref|NM_116069.3| Arabidopsis thaliana catalytic/ hydrolase AT3G62040 mRNA, complete
           cds
          Length = 867

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 139 ggaatcaacttagcatgccgcaagaacatccaagactacatgct 182
           |||||||||||||| || || || ||||||||||| | ||||||
Sbjct: 138 ggaatcaacttagcttgtcgaaacaacatccaagagttcatgct 181
to top
>gb|BC083769.1| Rattus norvegicus cDNA clone IMAGE:7193220
          Length = 1680

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 aggagagcctggtccccaag 219
           ||||||||||||||||||||
Sbjct: 750 aggagagcctggtccccaag 769
to top
>gb|BC105845.1| Rattus norvegicus cDNA clone MGC:125023 IMAGE:7456327, complete cds
          Length = 1445

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 aggagagcctggtccccaag 219
           ||||||||||||||||||||
Sbjct: 522 aggagagcctggtccccaag 541
to top
>gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, complete sequence
          Length = 199229

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tcctgctctgtcttccttcc 21
             ||||||||||||||||||||
Sbjct: 61413 tcctgctctgtcttccttcc 61394
to top
>ref|XM_590020.2| PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily C,
            member 10, transcript variant 2 (LOC539876), mRNA
          Length = 3606

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  tttgacatggatgacaccat 122
            ||||||||||||||||||||
Sbjct: 1958 tttgacatggatgacaccat 1939
to top
>ref|XM_878796.1| PREDICTED: Bos taurus similar to DnaJ (Hsp40) homolog, subfamily C,
            member 10, transcript variant 3 (LOC539876), mRNA
          Length = 3474

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  tttgacatggatgacaccat 122
            ||||||||||||||||||||
Sbjct: 1826 tttgacatggatgacaccat 1807
to top
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence
          Length = 236084

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tcctgctctgtcttccttcc 21
             ||||||||||||||||||||
Sbjct: 29282 tcctgctctgtcttccttcc 29301
to top
>gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA
          Length = 4025

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 325  ctgccgtacgagaagctgaa 344
            ||||||||||||||||||||
Sbjct: 2595 ctgccgtacgagaagctgaa 2576
to top
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence
          Length = 218519

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   tttgacatggatgacaccat 122
             ||||||||||||||||||||
Sbjct: 74461 tttgacatggatgacaccat 74442
to top
>gb|BT010899.1| Arabidopsis thaliana At3g62040 mRNA, complete cds
          Length = 750

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 139 ggaatcaacttagcatgccgcaagaacatccaagactacatgct 182
           |||||||||||||| || || || ||||||||||| | ||||||
Sbjct: 73  ggaatcaacttagcttgtcgaaacaacatccaagagttcatgct 116
to top
>gb|AC124401.3| Mus musculus BAC clone RP24-362C2 from chromosome 19, complete sequence
          Length = 138622

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ggagagcctggtccccaaga 220
             ||||||||||||||||||||
Sbjct: 88618 ggagagcctggtccccaaga 88599
to top
>gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome 5, complete sequence
          Length = 196687

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tcctgctctgtcttccttcc 21
             ||||||||||||||||||||
Sbjct: 57092 tcctgctctgtcttccttcc 57073
to top
>emb|AJ252018.1|DME252018 Drosophila melanogaster mRNA for mitochondrial aconitase (mAc gene)
          Length = 2889

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 ctgccgtacgagaagctgaa 344
           ||||||||||||||||||||
Sbjct: 304 ctgccgtacgagaagctgaa 323
to top
>gb|AC069077.7| Homo sapiens chromosome 10 clone RP11-418N10, complete sequence
          Length = 160384

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      ctgctctgtcttccttccgttcag 27
              ||||||||||||||||| ||||||
Sbjct: 120779 ctgctctgtcttccttctgttcag 120756
to top
>ref|NM_079969.2| Drosophila melanogaster Aconitase CG9244-RB (Acon), mRNA
          Length = 3156

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 ctgccgtacgagaagctgaa 344
           ||||||||||||||||||||
Sbjct: 564 ctgccgtacgagaagctgaa 583
to top
>gb|AY051705.1| Drosophila melanogaster LD24561 full length cDNA
          Length = 2751

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 ctgccgtacgagaagctgaa 344
           ||||||||||||||||||||
Sbjct: 270 ctgccgtacgagaagctgaa 289
to top
>gb|AC093099.1| Drosophila melanogaster, chromosome 2L, region 39A-39D, BAC clone
            BACR34H23, complete sequence
          Length = 163475

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  ctgccgtacgagaagctgaa 344
            ||||||||||||||||||||
Sbjct: 9627 ctgccgtacgagaagctgaa 9646
to top
>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 102    gtttgacatggatgacaccatcta 125
              |||| |||||||||||||||||||
Sbjct: 114999 gttttacatggatgacaccatcta 115022
to top
>emb|BX822714.1|CNS0A7T1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB5ZB10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 885

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 139 ggaatcaacttagcatgccgcaagaacatccaagactacatgct 182
           |||||||||||||| || || || ||||||||||| | ||||||
Sbjct: 155 ggaatcaacttagcttgtcgaaacaacatccaagagttcatgct 198
to top
>gb|AE003669.5| Drosophila melanogaster chromosome 2L, section 78 of 83 of the complete
              sequence
          Length = 273993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ctgccgtacgagaagctgaa 344
              ||||||||||||||||||||
Sbjct: 159965 ctgccgtacgagaagctgaa 159984
to top
>gb|AC006574.1|AC006574 Drosophila melanogaster, chromosome 2R, region 39A3-39B1, P1 clones
             DS02919 and DS05130, complete sequence
          Length = 127035

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   ctgccgtacgagaagctgaa 344
             ||||||||||||||||||||
Sbjct: 87472 ctgccgtacgagaagctgaa 87491
to top
>gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, complete sequence
          Length = 219132

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ggagagcctggtccccaaga 220
             ||||||||||||||||||||
Sbjct: 75428 ggagagcctggtccccaaga 75409


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,094,816
Number of Sequences: 3902068
Number of extensions: 3094816
Number of successful extensions: 74271
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74139
Number of HSP's gapped (non-prelim): 132
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top