ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart61h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC124383.3| Mus musculus BAC clone RP24-411E14 from chromosome 18, complete sequence Length = 175177 Score = 44.1 bits (22), Expect = 0.010 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcctcccc 22 |||||||||||||||||||||| Sbjct: 46500 cccatccctcccactcctcccc 46479
>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence Length = 208109 Score = 44.1 bits (22), Expect = 0.010 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcctcccc 22 |||||||||||||||||||||| Sbjct: 186349 cccatccctcccactcctcccc 186328
>emb|AM085492.1| Spalax carmeli mRNA for heparanase (hpa gene) Length = 2078 Score = 42.1 bits (21), Expect = 0.039 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcctcccc 22 ||||||||||||||||||||| Sbjct: 357 ccatccctcccactcctcccc 337
>emb|AM085491.1| Spalax golani mRNA for heparanase (hpa gene) Length = 2085 Score = 42.1 bits (21), Expect = 0.039 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcctcccc 22 ||||||||||||||||||||| Sbjct: 364 ccatccctcccactcctcccc 344
>emb|AM085490.1| Spalax galili mRNA for heparanase (hpa gene) Length = 2078 Score = 42.1 bits (21), Expect = 0.039 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcctcccc 22 ||||||||||||||||||||| Sbjct: 357 ccatccctcccactcctcccc 337
>gb|AC025839.12| Homo sapiens chromosome 8, clone RP11-370K2, complete sequence Length = 178009 Score = 40.1 bits (20), Expect = 0.16 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccccca 24 |||||||||||||||||||| Sbjct: 70490 tccctcccactcctccccca 70471
>gb|AY157515.1| Rattus norvegicus N-methyl-D-aspartate receptor 1 (Grin1) gene, exons 1 through 6 and partial cds; alternatively spliced Length = 14641 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctccccca 24 ||||||||||||||||||| Sbjct: 12084 ccctcccactcctccccca 12066
>gb|M96374.1|RATNIAA Rattus norvegicus non-processed neurexin I-alpha mRNA, complete cds Length = 5609 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcctc 19 ||||||||||||||||||| Sbjct: 753 cccatccctcccactcctc 771
>gb|AC165357.4| Mus musculus BAC clone RP23-114G24 from chromosome 10, complete sequence Length = 216816 Score = 38.2 bits (19), Expect = 0.62 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctccccc 23 |||||||| |||||||||||||| Sbjct: 141769 cccatcccacccactcctccccc 141791
>gb|AC154641.2| Mus musculus BAC clone RP23-276C17 from chromosome 16, complete sequence Length = 190523 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccca 24 ||||||||||||||||||| Sbjct: 155672 ccctcccactcctccccca 155690
>gb|AC138766.20| Mus musculus chromosome 5, clone RP23-444J3, complete sequence Length = 206494 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 177468 tccctcccactcctccccc 177486
>ref|NM_021767.2| Rattus norvegicus neurexin 1 (Nrxn1), mRNA Length = 5609 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcctc 19 ||||||||||||||||||| Sbjct: 753 cccatccctcccactcctc 771
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 32273 cctcccactcctcccccag 32255
>gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, complete sequence Length = 227078 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ctcccactcctcccccagg 26 ||||||||||||||||||| Sbjct: 15618 ctcccactcctcccccagg 15600
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccca 24 ||||||||||||||||||| Sbjct: 53332 ccctcccactcctccccca 53350
>gb|AC144796.2| Mus musculus BAC clone RP24-397M4 from chromosome 7, complete sequence Length = 140189 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctccc 21 ||||||||||||||||||| Sbjct: 42387 catccctcccactcctccc 42369
>gb|AC125486.4| Mus musculus BAC clone RP23-21G7 from chromosome 10, complete sequence Length = 222316 Score = 38.2 bits (19), Expect = 0.62 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctccccc 23 |||||||| |||||||||||||| Sbjct: 88784 cccatcccacccactcctccccc 88806
>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence Length = 193890 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctccc 21 ||||||||||||||||||| Sbjct: 162723 catccctcccactcctccc 162705
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 115720 cctcccactcctcccccag 115702
>gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete sequence Length = 217286 Score = 38.2 bits (19), Expect = 0.62 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 catccctcccactcctcccccag 25 |||||||||| |||||||||||| Sbjct: 84000 catccctccccctcctcccccag 83978
>gb|AC093376.5| Homo sapiens BAC clone RP11-147A22 from 7, complete sequence Length = 176162 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 104845 tccctcccactcctccccc 104827
>emb|AL513122.7| Human DNA sequence from clone RP11-477J21 on chromosome 9 Contains the 3' end of a novel gene, a ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B, isoform 2 (HO57, VATB, VPP3, Vma2, ATP6B2, ATP6B1B2 (ATP6V1B2) pseudogene, the GSN gene for gelsolin (amyloidosis, Finnish type), a novel gene (MOST2), a novel gene and two CpG islands, complete sequence Length = 108930 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 59713 tccctcccactcctccccc 59695
>gb|AC118467.37| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 204699 Score = 38.2 bits (19), Expect = 0.62 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 catccctcccactcctcccccag 25 |||||||||| |||||||||||| Sbjct: 60213 catccctccccctcctcccccag 60235
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1, complete sequence Length = 114771 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 tcccactcctcccccagga 27 ||||||||||||||||||| Sbjct: 36631 tcccactcctcccccagga 36613
>emb|AL009172.1|HS212G6 Human DNA sequence from clone RP1-212G6 on chromosome Xp11.3-11.4 Contains the 5'end of the SYN1 gene for synapsin I, the PFC gene for properdin P factor (complement), the ELK1 member of the ETS oncogene family, the UTX gene for ubiquitously-expressed transcript, an SMS (spermine synthase) pseudogene, a novel gene (LOC286403) and three CpG islands, complete sequence Length = 156601 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 85610 cctcccactcctcccccag 85592
>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163461 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ctcccactcctcccccagg 26 ||||||||||||||||||| Sbjct: 124258 ctcccactcctcccccagg 124240
>dbj|AK126639.1| Homo sapiens cDNA FLJ44681 fis, clone BRACE3010086, moderately similar to Homo sapiens chondroitin sulfate proteoglycan 3 (neurocan) (CSPG3) Length = 4481 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 760 tccctcccactcctccccc 778
>gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, complete sequence Length = 168433 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 10005 cctcccactcctcccccag 9987
>dbj|AK140647.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930068L23 product:integrin alpha V, full insert sequence Length = 2783 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccca 24 ||||||||||||||||||| Sbjct: 2028 ccctcccactcctccccca 2046
>dbj|AK171739.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830008B15 product:unclassifiable, full insert sequence Length = 3122 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccca 24 ||||||||||||||||||| Sbjct: 1206 ccctcccactcctccccca 1224
>tpg|BK000627.1| TPA: TPA_exp: Homo sapiens equilibrative nucleoside transporter 4 (ENT4) gene, complete cds Length = 25000 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 1514 tccctcccactcctccccc 1496
>gb|AC155657.8| Mus musculus 6 BAC RP24-113L15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159299 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 17911 cctcccactcctcccccag 17929
>gb|AC025259.49| Homo sapiens 12 BAC RP11-1100L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212622 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 10 cccactcctcccccaggac 28 ||||||||||||||||||| Sbjct: 158806 cccactcctcccccaggac 158824
>gb|AC138430.2| Homo sapiens chromosome 19 clone LLNLR-259H9, complete sequence Length = 43185 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 26137 tccctcccactcctccccc 26119 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 25536 tccctcccactcctccccc 25518
>gb|AC135966.2| Homo sapiens chromosome 3 clone RP11-94D3, complete sequence Length = 162867 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 104255 cctcccactcctcccccag 104237
>gb|AC099599.6| Mus musculus chromosome 7, clone RP23-115D8, complete sequence Length = 209810 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctccc 21 ||||||||||||||||||| Sbjct: 198066 catccctcccactcctccc 198084
>emb|AL772301.7| Mouse DNA sequence from clone RP23-111F12 on chromosome 2, complete sequence Length = 187665 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccca 24 ||||||||||||||||||| Sbjct: 92644 ccctcccactcctccccca 92662
>gb|AC005254.1|AC005254 Homo sapiens chromosome 19, long range PCR product from cosmid R29861, complete sequence Length = 20988 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 6713 tccctcccactcctccccc 6731 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccccc 23 ||||||||||||||||||| Sbjct: 6112 tccctcccactcctccccc 6130
>gb|AC132453.3| Mus musculus BAC clone RP23-200J18 from 6, complete sequence Length = 206248 Score = 38.2 bits (19), Expect = 0.62 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 cctcccactcctcccccag 25 ||||||||||||||||||| Sbjct: 175178 cctcccactcctcccccag 175196
>gb|AC163992.9| Mus musculus chromosome 1, clone RP23-193H10, complete sequence Length = 198062 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 ccactcctcccccaggac 28 |||||||||||||||||| Sbjct: 10223 ccactcctcccccaggac 10206
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 264652 tccctcccactcctcccc 264635
>gb|AC102654.7| Mus musculus chromosome 1, clone RP23-2K13, complete sequence Length = 245404 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctccccc 23 |||||||||||||||||| Sbjct: 89362 ccctcccactcctccccc 89345
>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence Length = 179087 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccca 24 |||||||||||||||||| Sbjct: 4409 cctcccactcctccccca 4392
>gb|AC158542.2| Pan troglodytes BAC clone CH251-262O17 from chromosome y, complete sequence Length = 174274 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctcccc 22 ||||||||||| |||||||||| Sbjct: 15926 cccatccctcctactcctcccc 15947
>gb|AC183274.3| Pan troglodytes BAC clone CH251-156F5 from chromosome 7, complete sequence Length = 163934 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 14831 tccctcccactcctcccc 14848
>gb|AC146801.2| Xenopus tropicalis clone CH216-59H14, complete sequence Length = 97204 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 cccactcctcccccagga 27 |||||||||||||||||| Sbjct: 35765 cccactcctcccccagga 35782
>gb|AC005056.2| Homo sapiens BAC clone CTB-51J22 from 7, complete sequence Length = 98188 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 cccactcctcccccagga 27 |||||||||||||||||| Sbjct: 45786 cccactcctcccccagga 45803
>gb|AC135670.3| Mus musculus BAC clone RP23-370D21 from chromosome 19, complete sequence Length = 182582 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcctc 19 |||||||||||||||||| Sbjct: 82583 ccatccctcccactcctc 82566
>ref|XM_571532.1| Cryptococcus neoformans var. neoformans JEC21 motor (CNF00790) partial mRNA Length = 14097 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 400 tccctcccactcctcccc 417
>emb|CR942271.10| Human DNA sequence from clone DAMC-325F20 on chromosome 6, complete sequence Length = 52666 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 43171 catccctcccactcctcc 43188
>ref|XM_843220.1| PREDICTED: Canis familiaris similar to phosphate cytidylyltransferase 2, ethanolamine, transcript variant 3 (LOC607608), mRNA Length = 1655 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctcccactcctcccccag 25 |||||||||||||||||| Sbjct: 1383 ctcccactcctcccccag 1400
>ref|XM_850697.1| PREDICTED: Canis familiaris similar to phosphate cytidylyltransferase 2, ethanolamine, transcript variant 4 (LOC607608), mRNA Length = 1602 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctcccactcctcccccag 25 |||||||||||||||||| Sbjct: 1330 ctcccactcctcccccag 1347
>gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosome 3, complete sequence Length = 177109 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccca 24 |||||||||||||||||| Sbjct: 40812 cctcccactcctccccca 40829
>gb|AC069152.5| Homo sapiens BAC clone RP11-331L17 from UL, complete sequence Length = 191433 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 99320 tccctcccactcctcccc 99303
>gb|AC006015.5| Homo sapiens PAC clone RP5-965K10 from 7, complete sequence Length = 112417 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 64940 tccctcccactcctcccc 64923
>gb|BC029678.1| Mus musculus RAB5C, member RAS oncogene family, mRNA (cDNA clone MGC:36507 IMAGE:5368061), complete cds Length = 1587 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1480 ccatccctcccactcccccccc 1459
>gb|BC023027.1| Mus musculus RAB5C, member RAS oncogene family, mRNA (cDNA clone MGC:36517 IMAGE:5369566), complete cds Length = 1620 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1496 ccatccctcccactcccccccc 1475
>emb|AL805917.3| Human DNA sequence from clone DAQB-10J12 on chromosome 6 Contains the TIGD1L gene for tigger transposable element derived 1-like, the 5' end of the C6orf214 gene for chromosome 6 open reading frame 214, the 5' end of the DDR1 gene for discoidin domain receptor family, member 1, and 1 CpG island, complete sequence Length = 65373 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 62903 catccctcccactcctcc 62920
>emb|AL773589.3| Human DNA sequence from clone DAQB-196C18 on chromosome 6 Contains the central part of the DDR1 gene for discoidin domain receptor family, member 1, and no CpG islands, complete sequence Length = 15168 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 321 catccctcccactcctcc 338
>emb|AL662870.16| Human DNA sequence from clone XXbac-70P20 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, a putative novel transcript and two CpG islands, complete sequence Length = 61698 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 36053 catccctcccactcctcc 36070
>emb|AL662854.7| Human DNA sequence from clone XXbac-105N19 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, the GTF2H4 gene for general transcrition factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, two putative novel transcripts, the gene for DPCR1 protein and four CpG islands, complete sequence Length = 84474 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 7188 catccctcccactcctcc 7205
>emb|AL513016.5| Human DNA sequence from clone RP11-474O21 on chromosome 1 Contains the 5' end of the gene for short-chain dehydrogenase/reductase 1 (SDR1), two genes for novel proteins similar to esterases, a ribosomal protein L23a (RPL23A) pseudogene, the gene for a novel protein (MGC35194) and a CpG island, complete sequence Length = 150720 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 8369 catccctcccactcctcc 8352
>emb|AL391665.28| Human DNA sequence from clone RP11-519K18 on chromosome 10 Contains the 3' end of the RAI17 gene for retinoic acid induced 17, the 5' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F) and two CpG islands, complete sequence Length = 159866 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 66729 tccctcccactcctcccc 66712
>emb|AL358794.19| Human DNA sequence from clone RP11-430L17 on chromosome 1 Contains the 5' end of a novel gene (KIAA1332), a ribosomal protein L22 (RPL22) pseudogene, a putative MAPK activating protein (DKFZp566C0424), a novel gene (LOC374955) and two CpG islands, complete sequence Length = 124949 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 atccctcccactcctccc 21 |||||||||||||||||| Sbjct: 113388 atccctcccactcctccc 113405
>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3 Contains the 5' end of one variant of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2) and a CpG island, complete sequence Length = 133394 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcct 18 |||||||||||||||||| Sbjct: 38539 cccatccctcccactcct 38556
>emb|AL133481.14| Human DNA sequence from clone RP11-342M3 on chromosome 10 Contains the 3' end of the PPIF gene for peptidylprolyl isomerase F (cyclophilin F), gene FLJ90798, the EIF5AP1 pseudogene for eukaryotic translation initiation factor 5A pseudogene 1, a novel gene, a novel pseudogene and a CpG island, complete sequence Length = 167234 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 cccactcctcccccagga 27 |||||||||||||||||| Sbjct: 74282 cccactcctcccccagga 74299
>gb|AC026761.17| Mus musculus Strain 129S6/SvEvTac chromosome 19 BAC, RP22-325J22, Complete Sequence, complete sequence Length = 163475 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 ccatccctcccactcctc 19 |||||||||||||||||| Sbjct: 135903 ccatccctcccactcctc 135920
>emb|AL627070.16| Mouse DNA sequence from clone RP23-353E13 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, wo novel genes and a CpG island, complete sequence Length = 210813 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcctc 19 |||||||||||||||||| Sbjct: 29209 ccatccctcccactcctc 29192
>emb|CR855878.5| Human DNA sequence from clone RP13-469P20 on chromosome 1, complete sequence Length = 225410 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 8405 catccctcccactcctcc 8388
>emb|CR853303.6| Pig DNA sequence from clone PigE-173F2, complete sequence Length = 151259 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctcccc 22 ||||||||||||||||| |||| Sbjct: 122462 cccatccctcccactccccccc 122483
>emb|CR753093.2| Human DNA sequence from clone DADB-32E8 on chromosome 6, complete sequence Length = 28272 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 24662 catccctcccactcctcc 24679
>gb|AC015688.11| Homo sapiens chromosome 17, clone RP11-19P22, complete sequence Length = 152351 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 5 tccctcccactcctcccccagg 26 |||||||||| ||||||||||| Sbjct: 38055 tccctcccacacctcccccagg 38034
>ref|NM_024456.1| Mus musculus RAB5C, member RAS oncogene family (Rab5c), mRNA Length = 1943 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1595 ccatccctcccactcccccccc 1574
>gb|AC114781.2| Homo sapiens BAC clone RP11-576N17 from 4, complete sequence Length = 149188 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 ccatccctcccactcctc 19 |||||||||||||||||| Sbjct: 99327 ccatccctcccactcctc 99344
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctcccc 22 ||||||||||| |||||||||| Sbjct: 23868 cccatccctcctactcctcccc 23847
>gb|AC099782.2| Homo sapiens chromosome 3 clone RP11-852E15, complete sequence Length = 209772 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 ccactcctcccccaggac 28 |||||||||||||||||| Sbjct: 148332 ccactcctcccccaggac 148315
>dbj|AK134691.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330525E15 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1829 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1481 ccatccctcccactcccccccc 1460
>gb|AF461265.1| Homo sapiens heparanase 1 gene, promoter region and 5' UTR Length = 3492 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcctc 19 |||||||||||||||||| Sbjct: 3349 ccatccctcccactcctc 3332
>gb|AC093295.2| Homo sapiens chromosome 5 clone RP11-535A15, complete sequence Length = 203831 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccca 24 |||||||||||||||||| Sbjct: 90541 cctcccactcctccccca 90524
>dbj|AK167599.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530024J05 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1877 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1530 ccatccctcccactcccccccc 1509
>dbj|AK172328.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830201H23 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1580 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1487 ccatccctcccactcccccccc 1466
>dbj|AK159832.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420032F05 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1622 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1530 ccatccctcccactcccccccc 1509
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 ctcctcccccaggacggg 31 |||||||||||||||||| Sbjct: 10737 ctcctcccccaggacggg 10720
>gb|U93037.1|HSELAST4 Homo sapiens elastin gene, exons 5-27 and alternatively spliced products, partial cds Length = 19686 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 cccactcctcccccagga 27 |||||||||||||||||| Sbjct: 7849 cccactcctcccccagga 7832
>emb|BX927194.9| Human DNA sequence from clone DAMA-342O2 on chromosome 6, complete sequence Length = 110208 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 56452 catccctcccactcctcc 56469
>dbj|AK170540.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107G03 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1642 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1550 ccatccctcccactcccccccc 1529
>gb|AC158996.2| Mus musculus BAC clone RP24-137I10 from chromosome 9, complete sequence Length = 154654 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccc 23 |||||||||||||||||| Sbjct: 124509 ccctcccactcctccccc 124526
>gb|BC027378.1| Mus musculus RAB5C, member RAS oncogene family, mRNA (cDNA clone IMAGE:4951081), partial cds Length = 1528 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1302 ccatccctcccactcccccccc 1281
>gb|AC148705.1| Macaca mulatta Major Histocompatibility Complex MMU348N13, complete sequence Length = 186491 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 168561 catccctcccactcctcc 168578
>gb|AC148704.1| Macaca mulatta Major Histocompatibility Complex BAC MMU337E21, complete sequence Length = 147539 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 70031 catccctcccactcctcc 70048
>dbj|AK089199.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630036C17 product:RAB5C, member RAS oncogene family, full insert sequence Length = 1943 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1595 ccatccctcccactcccccccc 1574
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 1557492 catccctcccactcctcc 1557475
>gb|AC073283.8| Homo sapiens BAC clone RP11-761B3 from 2, complete sequence Length = 181720 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcct 18 |||||||||||||||||| Sbjct: 159828 cccatccctcccactcct 159811
>ref|XM_213463.3| PREDICTED: Rattus norvegicus RAB5C, member RAS oncogene family (predicted) (Rab5c_predicted), mRNA Length = 1878 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 1533 ccatccctcccactcccccccc 1512
>gb|AC122133.4| Homo sapiens BAC clone RP11-220H4 from 7, complete sequence Length = 191103 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 15954 tccctcccactcctcccc 15971
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 1059496 catccctcccactcctcc 1059479
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 633648 catccctcccactcctcc 633631
>emb|CT573100.6| Mouse DNA sequence from clone RP23-218E7 on chromosome 12, complete sequence Length = 183966 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccc 23 |||||||||||||||||| Sbjct: 81144 ccctcccactcctccccc 81161
>gb|AC110518.20| Mus musculus chromosome 1, clone RP23-10P1, complete sequence Length = 198526 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 ccactcctcccccaggac 28 |||||||||||||||||| Sbjct: 47556 ccactcctcccccaggac 47573
>dbj|AP003061.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-100P11, complete sequence Length = 176129 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctcccc 22 ||||||||||||||||| |||| Sbjct: 143638 cccatccctcccactccacccc 143617
>dbj|AP003069.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-417F7, complete sequence Length = 171976 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctcccc 22 ||||||||||||||||| |||| Sbjct: 43843 cccatccctcccactccacccc 43822
>gb|AC005596.1|AC005596 Homo sapiens chromosome 19, cosmid R28736, complete sequence Length = 39282 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctcccc 22 |||||||||||||||||| Sbjct: 9761 tccctcccactcctcccc 9744
>emb|AL928867.9| Mouse DNA sequence from clone RP23-468L22 on chromosome 2, complete sequence Length = 111535 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 5 tccctcccactcctcccccagg 26 ||||||| |||||||||||||| Sbjct: 36122 tccctccaactcctcccccagg 36143
>gb|AC004211.1|AC004211 Homo sapiens clone UWGC:Y67C112 from 6p21, complete sequence Length = 48731 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 41159 catccctcccactcctcc 41142
>gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, complete sequence Length = 212119 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctccccc 23 |||||||||||||||||| Sbjct: 41351 ccctcccactcctccccc 41334
>gb|AC101841.5| Mus musculus chromosome 1, clone RP23-251G19, complete sequence Length = 174900 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctccccc 23 |||||||||||||||||| Sbjct: 113653 ccctcccactcctccccc 113670
>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete sequence Length = 234878 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 9 tcccactcctcccccagg 26 |||||||||||||||||| Sbjct: 58682 tcccactcctcccccagg 58665
>emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chromosome 11, complete sequence Length = 168981 Score = 36.2 bits (18), Expect = 2.4 Identities = 21/22 (95%) Strand = Plus / Plus Query: 2 ccatccctcccactcctccccc 23 |||||||||||||||| ||||| Sbjct: 126274 ccatccctcccactcccccccc 126295
>emb|AL591854.18| Mouse DNA sequence from clone RP23-105M23 on chromosome 2, complete sequence Length = 187181 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 ccactcctcccccaggac 28 |||||||||||||||||| Sbjct: 142684 ccactcctcccccaggac 142667
>dbj|AB023050.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:832F2, complete sequence Length = 112018 Score = 36.2 bits (18), Expect = 2.4 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctcc 20 |||||||||||||||||| Sbjct: 34526 catccctcccactcctcc 34509
>gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, complete sequence Length = 183087 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 8 ctcccactcctccccca 24 ||||||||||||||||| Sbjct: 109941 ctcccactcctccccca 109925
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 54904 ccctcccactcctcccc 54920
>gb|BC052996.1| Homo sapiens catenin (cadherin-associated protein), alpha 2, mRNA (cDNA clone MGC:60356 IMAGE:6187158), complete cds Length = 3853 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3230 cccatccctcccactcc 3214
>ref|XM_515576.1| PREDICTED: Pan troglodytes LOC459352 (LOC459352), mRNA Length = 3250 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 2650 cccatccctcccactcc 2634
>ref|XM_473387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 657 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 21 cctcccactcctccccc 37
>gb|U29187.1| Mus musculus long incubation prion protein (Prnpb) and prion-like protein (Prnd) genes, complete cds Length = 39760 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 4636 ccctcccactcctcccc 4652
>gb|U29186.1|MUSPRNPA Mus musculus short incubation prion protein Prnpa gene, complete cds Length = 38418 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 7056 ccctcccactcctcccc 7072
>gb|AC005572.1| Homo sapiens chromosome 5, PAC clone 248b21 (LBNL H141), complete sequence Length = 95448 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 |||||||||||||| |||||| Sbjct: 69333 cccatccctcccacgcctccc 69313
>gb|AC113473.20| Mus musculus chromosome 1, clone RP23-280F6, complete sequence Length = 221025 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 8 ctcccactcctccccca 24 ||||||||||||||||| Sbjct: 13072 ctcccactcctccccca 13056
>gb|AC151968.3| Mus musculus BAC clone RP24-247B20 from chromosome 9, complete sequence Length = 191668 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 100380 cccatccctcccactcc 100396
>gb|AC008140.11| Drosophila melanogaster clone BACR15J23, complete sequence Length = 140973 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 32576 tcccactcctcccccag 32592
>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence Length = 254081 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 141976 cctcccactcctccccc 141960
>gb|AC009219.7| Drosophila melanogaster clone BACR32N16, complete sequence Length = 159007 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 74888 tcccactcctcccccag 74872
>ref|XM_421914.1| PREDICTED: Gallus gallus similar to 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (P60 lymphocyte protein) (HuCHA60) (LOC424058), mRNA Length = 1617 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 ||||||||||||| ||||||| Sbjct: 1526 cccatccctcccattcctccc 1506
>ref|NM_145732.1| Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript variant 1, mRNA Length = 3911 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3305 cccatccctcccactcc 3289
>ref|NM_009819.1| Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript variant 2, mRNA Length = 3955 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3349 cccatccctcccactcc 3333
>ref|XM_605884.2| PREDICTED: Bos taurus similar to Alpha-2 catenin (Alpha-catenin-related protein) (Alpha N-catenin) (LOC527492), partial mRNA Length = 2482 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 1870 cccatccctcccactcc 1854
>gb|AC147121.2| Mus musculus BAC clone RP24-160L14 from chromosome 7, complete sequence Length = 185191 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 |||||||||||||| |||||| Sbjct: 135168 cccatccctcccacccctccc 135148
>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence Length = 249301 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctc 19 ||||||||||||||||| Sbjct: 196348 catccctcccactcctc 196332
>ref|XM_652892.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0380.2), mRNA Length = 1890 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctc 19 ||||||||||||||||| Sbjct: 518 catccctcccactcctc 534
>ref|NM_004389.2| Homo sapiens catenin (cadherin-associated protein), alpha 2 (CTNNA2), mRNA Length = 3853 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3230 cccatccctcccactcc 3214
>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete sequence Length = 205177 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 8 ctcccactcctccccca 24 ||||||||||||||||| Sbjct: 143921 ctcccactcctccccca 143937
>gb|AC167018.4| Mus musculus BAC clone RP23-354F11 from chromosome 16, complete sequence Length = 199488 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 8 ctcccactcctccccca 24 ||||||||||||||||| Sbjct: 32365 ctcccactcctccccca 32381
>gb|AC105153.6| Mus musculus chromosome 17, clone RP24-376L20, complete sequence Length = 184920 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 164514 cccatccctcccactcc 164530
>gb|AF049895.3| Homo sapiens chromosome 8 multiple clones map q21.3, complete sequence Length = 331864 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 14 ctcctcccccaggacgg 30 ||||||||||||||||| Sbjct: 131864 ctcctcccccaggacgg 131848
>gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome 6, complete sequence Length = 213811 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 26296 cccatccctcccactcc 26312
>ref|XM_860694.1| PREDICTED: Canis familiaris similar to catenin, alpha 2, transcript variant 3 (LOC483088), mRNA Length = 3603 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3005 cccatccctcccactcc 2989
>ref|XM_860677.1| PREDICTED: Canis familiaris similar to catenin, alpha 2, transcript variant 2 (LOC483088), mRNA Length = 1738 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 1140 cccatccctcccactcc 1124
>ref|XM_540203.2| PREDICTED: Canis familiaris similar to catenin, alpha 2, transcript variant 1 (LOC483088), mRNA Length = 3615 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3017 cccatccctcccactcc 3001
>emb|CT009551.8| Pig DNA sequence from clone CH242-214G8 on chromosome 17, complete sequence Length = 239237 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctccc 21 ||||||| ||||||||||||| Sbjct: 55578 cccatccatcccactcctccc 55598
>emb|CR956635.11| Pig DNA sequence from clone CH242-184L20 on chromosome 17, complete sequence Length = 211741 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 83362 cccatccctcccactcc 83346
>emb|CT009719.10| Mouse DNA sequence from clone RP23-65P17 on chromosome 17, complete sequence Length = 205369 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 38135 tccctcccactcctccc 38151
>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence Length = 293695 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 118537 cctcccactcctccccc 118553
>gb|AC174830.3| Myotis lucifugus clone CH235-234J19, complete sequence Length = 196835 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 ccactcctcccccagga 27 ||||||||||||||||| Sbjct: 125245 ccactcctcccccagga 125261
>gb|AC124405.4| Mus musculus BAC clone RP24-372I6 from chromosome 6, complete sequence Length = 153417 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 147360 cccatccctcccactcc 147376
>gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosome 17, complete sequence Length = 222615 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 181752 tccctcccactcctccc 181736
>gb|AC002045.1|HUAC002045 Human Chromosome 16 BAC clone CIT987SK-A-589H1, complete sequence Length = 124048 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 11 ccactcctcccccaggacggg 31 |||||||| |||||||||||| Sbjct: 64471 ccactcctaccccaggacggg 64491
>gb|AC079443.48| Mus musculus strain C57BL/6J clone rp23-381f7 map 6, complete sequence Length = 207091 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 123996 ccctcccactcctcccc 123980
>gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosome 18, complete sequence Length = 158836 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcct 18 ||||||||||||||||| Sbjct: 42270 ccatccctcccactcct 42254
>gb|AC124682.4| Mus musculus BAC clone RP24-336O24 from chromosome 6, complete sequence Length = 127717 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctccc 21 ||||| ||||||||||||||| Sbjct: 103825 cccattcctcccactcctccc 103845
>gb|AC124346.3| Mus musculus BAC clone RP24-460E12 from chromosome 12, complete sequence Length = 203150 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 88141 cccatccctcccactcc 88125
>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence Length = 173971 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 136058 cctcccactcctccccc 136042
>gb|AC079325.10| Homo sapiens chromosome 17, clone RP11-194J3, complete sequence Length = 191746 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 5 tccctcccactcctcccccag 25 |||||||||||||||| |||| Sbjct: 76063 tccctcccactcctccaccag 76083
>emb|Z93396.1|CEZC15 Caenorhabditis elegans Cosmid ZC15, complete sequence Length = 35875 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 5 tccctcccactcctcccccag 25 |||||||| |||||||||||| Sbjct: 20603 tccctccctctcctcccccag 20583
>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence Length = 184359 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 |||| |||||||||||||||| Sbjct: 57768 cccagccctcccactcctccc 57748
>emb|CR956374.5| Pig DNA sequence from clone CH242-153C17 on chromosome 17, complete sequence Length = 118034 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 77743 cccatccctcccactcc 77727
>emb|CR938718.3| Pig DNA sequence from clone CH242-2F11, complete sequence Length = 170585 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 130223 cccatccctcccactcc 130239
>emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, complete sequence Length = 194524 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 7 cctcccactcctcccccagga 27 |||||| |||||||||||||| Sbjct: 164544 cctccccctcctcccccagga 164564
>gb|AC123954.4| Mus musculus BAC clone RP23-249L6 from 13, complete sequence Length = 200727 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 11 ccactcctcccccagga 27 ||||||||||||||||| Sbjct: 127905 ccactcctcccccagga 127921
>emb|CR708755.2|CNS0G9TR Tetraodon nigroviridis full-length cDNA Length = 571 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 4 atccctcccactcctcc 20 ||||||||||||||||| Sbjct: 75 atccctcccactcctcc 59
>gb|AC102663.6| Mus musculus chromosome 6, clone RP23-244M15, complete sequence Length = 223742 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 60588 cctcccactcctccccc 60572
>gb|AC036121.11| Mus musculus chromosome 6, clone RP23-158O9, complete sequence Length = 215685 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 10040 cctcccactcctccccc 10056
>gb|AC120124.9| Mus musculus chromosome 7, clone RP23-21A23, complete sequence Length = 237001 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 127973 tccctcccactcctccc 127989
>gb|AC165955.3| Mus musculus BAC clone RP23-458A8 from chromosome 7, complete sequence Length = 203253 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 143381 tcccactcctcccccag 143397
>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence Length = 178775 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 111757 cccatccctcccactcc 111741
>gb|AC142287.1| Pan troglodytes BAC clone RP43-169H12 from 7, complete sequence Length = 134577 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcct 18 ||||||||||||||||| Sbjct: 128176 ccatccctcccactcct 128160
>gb|AC079440.38| Mus musculus strain 129/Sv clone ct7-340l7 map 2, complete sequence Length = 131387 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 4 atccctcccactcctcc 20 ||||||||||||||||| Sbjct: 71934 atccctcccactcctcc 71918
>gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete sequence Length = 126833 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 80918 ccctcccactcctcccc 80902
>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence Length = 223522 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 95827 tcccactcctcccccag 95843
>gb|BC067036.1| Mus musculus cDNA clone IMAGE:30362260, **** WARNING: chimeric clone **** Length = 4771 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 4140 cccatccctcccactcc 4124
>gb|AC162931.4| Mus musculus BAC clone RP23-213P10 from chromosome 9, complete sequence Length = 204861 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 70024 tccctcccactcctccc 70040
>gb|AC044798.7| Homo sapiens chromosome 16 clone RP11-22D3, complete sequence Length = 165651 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcct 18 ||||||||||||||||| Sbjct: 112864 ccatccctcccactcct 112848
>gb|AC133000.5| Rattus Norvegicus Strain CH230-62B6 BAC, BN/SsNHsd/MCW, complete sequence Length = 245581 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 8 ctcccactcctccccca 24 ||||||||||||||||| Sbjct: 133124 ctcccactcctccccca 133140
>emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 on chromosome 1p35-36.3 Contains part of a novel gene, complete sequence Length = 96608 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 3 catccctcccactcctc 19 ||||||||||||||||| Sbjct: 76072 catccctcccactcctc 76056
>emb|BX088578.4| Human DNA sequence from clone RP11-51H10 on chromosome 13 Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 16036 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 15908 tcccactcctcccccag 15892
>emb|AL606970.12| Human DNA sequence from clone RP11-503C24 on chromosome 6 Contains the 3' end of a novel gene, up to five novel genes, (inclusing FLJ31232 and pp13671), a meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6) pseudogene and three CpG islands, complete sequence Length = 161863 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctccc 21 |||| |||||||||||||||| Sbjct: 23950 cccacccctcccactcctccc 23970
>emb|AL391872.7| Human DNA sequence from clone RP11-87M1 on chromosome 9 Contains a ribosomal protein L4 (HRPL4) (RPL4) pseudogene, complete sequence Length = 175952 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 101326 cctcccactcctccccc 101310
>emb|AL359979.10| Human DNA sequence from clone RP11-239E10 on chromosome 1 Contains the 5' end of the TLR5 gene for toll-like receptor 5, two novel genes, the gene for a novel protein (FLJ10052) and a CpG island, complete sequence Length = 181466 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 89901 cctcccactcctccccc 89885
>emb|AL355518.20| Human DNA sequence from clone RP11-39C2 on chromosome 6 Contains the gene for a novel protein, complete sequence Length = 129947 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 12 cactcctcccccaggac 28 ||||||||||||||||| Sbjct: 74272 cactcctcccccaggac 74288
>gb|AC108527.6| Rattus norvegicus 9 BAC CH230-7F11 (Children's Hospital Oakland Research Institute) complete sequence Length = 225777 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 4 atccctcccactcctcc 20 ||||||||||||||||| Sbjct: 53460 atccctcccactcctcc 53476
>emb|AL109927.61|HSDJ547C9 Human DNA sequence from clone RP4-547C9 on chromosome 1p34.3-36.12 Contains the 3' end of the PPP1R8 protein phosphatase 1, regulatory (inhibitor) subunit 8, the C1orf38 gene for chromosome 1 open reading frame 38, the RPA2 gene for replication protein A2, 32kDa and a CpG island, complete sequence Length = 79438 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 30082 cctcccactcctccccc 30098
>emb|AL049538.9|HSJ1175I6 Human DNA sequence from clone RP5-1175I6 on chromosome 20 Contains the 3' end of the RIN2 gene for Ras and Rab interactor 2, the 5' end of the NAT5 gene for N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) and two CpG islands, complete sequence Length = 96276 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 39014 cctcccactcctccccc 38998
>emb|AL031007.1|HS757P12 Human DNA sequence from clone RP4-757P12 on chromosome Xp22.11-22.31 Contains part of the SCML2 gene forsex comb on midleg-like 2 (Drosophila), complete sequence Length = 47167 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 18829 cctcccactcctccccc 18813
>gb|AC136443.3| Homo sapiens chromosome 16 clone RP11-719K4, complete sequence Length = 193377 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 11 ccactcctcccccaggacggg 31 |||||||| |||||||||||| Sbjct: 117046 ccactcctaccccaggacggg 117066
>gb|AC134174.1| Drosophila pseudoobscura FOSMID DPSF1-548A7 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 41626 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 33481 cctcccactcctccccc 33497
>emb|CR861444.1| Pongo pygmaeus mRNA; cDNA DKFZp459F112 (from clone DKFZp459F112) Length = 3796 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3174 cccatccctcccactcc 3158
>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete sequence Length = 131246 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 32666 cctcccactcctccccc 32682
>gb|AC163286.4| Mus musculus BAC clone RP23-334L22 from chromosome 12, complete sequence Length = 239973 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 6839 cccatccctcccactcc 6823
>gb|AC118283.5| Homo sapiens BAC clone RP11-1398P2 from 4, complete sequence Length = 130805 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 44438 ccctcccactcctcccc 44422
>gb|BC040458.1| Homo sapiens catenin (cadherin-associated protein), alpha 2, mRNA (cDNA clone MGC:26134 IMAGE:4815068), complete cds Length = 3653 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 2968 cccatccctcccactcc 2952
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 75515 ccctcccactcctcccc 75531
>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19, complete sequence Length = 145383 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 11904 cctcccactcctccccc 11888
>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08, complete sequence Length = 130521 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 114256 cctcccactcctccccc 114240
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 130754 cctcccactcctccccc 130770
>emb|AJ719862.1| Gallus gallus mRNA for hypothetical protein, clone 7g5 Length = 2078 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 ||||||||||||| ||||||| Sbjct: 1793 cccatccctcccattcctccc 1773
>gb|AC159656.11| Mus musculus 6 BAC RP24-85F2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205702 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 26399 tcccactcctcccccag 26383
>emb|AL732561.6| Mouse DNA sequence from clone RP23-275L6 on chromosome 11, complete sequence Length = 4677 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 4510 ccctcccactcctcccc 4526
>emb|AL645598.14| Mouse DNA sequence from clone RP23-259J23 on chromosome 11 Contains a ribosomal protein S17 (Rps17) pseudogene, complete sequence Length = 141141 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 1833 ccctcccactcctcccc 1849
>emb|AL833072.2|HSM804383 Homo sapiens genomic DNA; cDNA DKFZp451D0119 (from clone DKFZp451D0119) Length = 5281 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 1 cccatccctcccactcctccc 21 |||||||||||||| |||||| Sbjct: 2857 cccatccctcccacgcctccc 2877
>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence Length = 203330 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 2 ccatccctcccactcct 18 ||||||||||||||||| Sbjct: 38878 ccatccctcccactcct 38894
>emb|CR861196.1| Pongo pygmaeus mRNA; cDNA DKFZp459D223 (from clone DKFZp459D223) Length = 2783 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 2163 cccatccctcccactcc 2147
>gb|AC123779.5| Homo sapiens chromosome 8, clone RP11-687D20, complete sequence Length = 168640 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 14 ctcctcccccaggacgg 30 ||||||||||||||||| Sbjct: 15485 ctcctcccccaggacgg 15469
>emb|BX005353.8| Zebrafish DNA sequence from clone DKEY-28D10, complete sequence Length = 212169 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 |||| |||||||||||||||| Sbjct: 186927 cccacccctcccactcctccc 186907
>gb|AC154492.2| Mus musculus BAC clone RP24-107B10 from chromosome 17, complete sequence Length = 172605 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 4045 ccctcccactcctcccc 4029
>gb|BC098827.1| Rattus norvegicus cDNA clone IMAGE:7378115 Length = 1359 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 6 ccctcccactcctcccccagg 26 ||||||||||||||| ||||| Sbjct: 382 ccctcccactcctcctccagg 402
>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence Length = 258929 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 |||||||||||||| |||||| Sbjct: 121189 cccatccctcccacgcctccc 121169
>gb|AF327645.1| Rattus norvegicus soluble guanylyl cyclase alpha 1 subunit gene, promoter region and exon 1 Length = 2964 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 2868 tccctcccactcctccc 2852
>emb|BX324194.7| Zebrafish DNA sequence from clone CH211-147A23 in linkage group 5, complete sequence Length = 187691 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 135002 cctcccactcctccccc 135018
>dbj|AK127226.1| Homo sapiens cDNA FLJ45293 fis, clone BRHIP3003063, highly similar to Alpha-2 catenin Length = 4350 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3742 cccatccctcccactcc 3726
>emb|CR604799.1| full-length cDNA clone CS0DF008YJ11 of Fetal brain of Homo sapiens (human) Length = 1680 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 1016 cccatccctcccactcc 1000
>gb|AY102661.1| Drosophila melanogaster GH11067 full insert cDNA Length = 3300 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 1930 tcccactcctcccccag 1946
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold Length = 489372 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 253958 tcccactcctcccccag 253942
>gb|AC046143.20| Homo sapiens 3 BAC RP11-534C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180365 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 4 atccctcccactcctcc 20 ||||||||||||||||| Sbjct: 59056 atccctcccactcctcc 59072
>gb|AC098933.2| Homo sapiens chromosome 1 clone RP11-417N7, complete sequence Length = 179414 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 9 tcccactcctcccccag 25 ||||||||||||||||| Sbjct: 77243 tcccactcctcccccag 77259
>gb|AC067751.7| Homo sapiens chromosome 10 clone RP11-357K14, complete sequence Length = 180882 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 89764 tccctcccactcctccc 89748
>gb|AC020757.5| Homo sapiens chromosome 16 clone CTD-2270E3, complete sequence Length = 159153 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 11 ccactcctcccccaggacggg 31 |||||||| |||||||||||| Sbjct: 72119 ccactcctaccccaggacggg 72099
>gb|AF452638.1| Homo sapiens distal-less homeo box 7 (DLX7) and distal-less homeo box 3 (DLX3) genes, complete cds Length = 75022 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 20402 tccctcccactcctccc 20386
>gb|AC104825.4| Homo sapiens BAC clone RP11-774O3 from 4, complete sequence Length = 134369 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 15574 ccctcccactcctcccc 15590
>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence Length = 175123 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 114449 tccctcccactcctccc 114465
>gb|AC093788.3| Homo sapiens BAC clone RP11-218F10 from 4, complete sequence Length = 160853 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 3 catccctcccactcctc 19 ||||||||||||||||| Sbjct: 127216 catccctcccactcctc 127232
>gb|AC020558.4| Homo sapiens BAC clone RP11-524F11 from 17, complete sequence Length = 183334 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 86580 cccatccctcccactcc 86596
>dbj|AK158916.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530006G14 product:catenin alpha 2, full insert sequence Length = 4018 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3409 cccatccctcccactcc 3393
>gb|AC068867.9| Homo sapiens chromosome 15, clone RP11-702M1, complete sequence Length = 179455 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 177653 tccctcccactcctccc 177669
>ref|XM_689691.1| PREDICTED: Danio rerio similar to misshapen/NIK-related kinase isoform 2 (LOC566422), mRNA Length = 2659 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 1058 cctcccactcctccccc 1074
>ref|XM_688945.1| PREDICTED: Danio rerio similar to misshapen/NIK-related kinase isoform 2 (LOC565679), mRNA Length = 4144 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 2543 cctcccactcctccccc 2559
>emb|CR523558.1| Gallus gallus finished cDNA, clone ChEST534i4 Length = 1082 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 ||||||||||||| ||||||| Sbjct: 812 cccatccctcccattcctccc 792
>gb|AC154451.2| Mus musculus BAC clone RP24-171K15 from chromosome 13, complete sequence Length = 162744 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 3 catccctcccactcctccccc 23 |||||||||||| |||||||| Sbjct: 148327 catccctcccacccctccccc 148347
>gb|AC119212.15| Mus musculus chromosome 1, clone RP24-192L21, complete sequence Length = 174380 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 1 cccatccctcccactcctccc 21 ||||||||||| ||||||||| Sbjct: 99337 cccatccctccaactcctccc 99317
>emb|BX510648.5| Zebrafish DNA sequence from clone CH211-155O9 in linkage group 5, complete sequence Length = 191453 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 99063 cctcccactcctccccc 99047
>gb|AC116801.9| Mus musculus chromosome 8, clone RP24-337F7, complete sequence Length = 168297 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 4 atccctcccactcctcc 20 ||||||||||||||||| Sbjct: 41306 atccctcccactcctcc 41290
>gb|AC026269.26| Homo sapiens chromosome 11, clone RP11-745E9, complete sequence Length = 173145 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 7 cctcccactcctcccccagga 27 |||||||||||| |||||||| Sbjct: 69054 cctcccactcctgccccagga 69034
>dbj|AK049664.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530019I22 product:unclassifiable, full insert sequence Length = 2779 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 1502 cccatccctcccactcc 1518
>ref|NM_075513.1| Caenorhabditis elegans ZC15.5 (ZC15.5) mRNA, complete cds Length = 1794 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 5 tccctcccactcctcccccag 25 |||||||| |||||||||||| Sbjct: 202 tccctccctctcctcccccag 182
>tpg|BK001427.1| TPA: TPA_exp: Homo sapiens NOELIN1 (OLFM1) gene, complete cds; alternatively spliced Length = 47757 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 631 cccatccctcccactcc 647
>gb|BC051995.1| Mus musculus catenin (cadherin associated protein), alpha 2, mRNA (cDNA clone IMAGE:5702658), containing frame-shift errors Length = 3953 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3299 cccatccctcccactcc 3283
>gb|BC079648.1| Mus musculus catenin (cadherin associated protein), alpha 2, mRNA (cDNA clone MGC:90598 IMAGE:6850068), complete cds Length = 4062 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 3434 cccatccctcccactcc 3418
>gb|AC156290.10| Mus musculus 6 BAC RP24-267I24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 144883 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 10 cccactcctcccccagg 26 ||||||||||||||||| Sbjct: 32905 cccactcctcccccagg 32921
>dbj|AK085340.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630013K15 product:unclassifiable, full insert sequence Length = 1286 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 6 ccctcccactcctcccc 22 ||||||||||||||||| Sbjct: 521 ccctcccactcctcccc 505
>dbj|AK006931.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700071K18 product:weakly similar to KIAA1674 PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 1693 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 1643 cctcccactcctccccc 1659
>emb|BX248094.10| Zebrafish DNA sequence from clone CH211-202I23 in linkage group 15, complete sequence Length = 91040 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 3850 tccctcccactcctccc 3866
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 27242387 cctcccactcctccccc 27242371 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 23036336 cctcccactcctccccc 23036352 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 7 cctcccactcctccccc 23 ||||||||||||||||| Sbjct: 15927691 cctcccactcctccccc 15927675
>gb|AC140504.2| Homo sapiens chromosome 16 clone RP11-1021N1, complete sequence Length = 212387 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 11 ccactcctcccccaggacggg 31 |||||||| |||||||||||| Sbjct: 35083 ccactcctaccccaggacggg 35103
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 14651018 cccatccctcccactcc 14651002
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 24121503 tccctcccactcctccc 24121487
>gb|AC122764.12| Mus musculus chromosome 15, clone RP24-93B16, complete sequence Length = 209493 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 2 ccatccctcccactcct 18 ||||||||||||||||| Sbjct: 129344 ccatccctcccactcct 129328
>gb|AC139264.2| Homo sapiens chromosome 16 clone RP11-1353E1, complete sequence Length = 231174 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus Query: 11 ccactcctcccccaggacggg 31 |||||||| |||||||||||| Sbjct: 112265 ccactcctaccccaggacggg 112245
>gb|AC139993.16| Mus musculus chromosome 12, clone RP23-67O10, complete sequence Length = 239577 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Minus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 149144 cccatccctcccactcc 149128
>gb|AC147286.3| Pan troglodytes BAC clone RP43-75F15 from chromosome 7, complete sequence Length = 167461 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 5 tccctcccactcctccc 21 ||||||||||||||||| Sbjct: 15383 tccctcccactcctccc 15399
>gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosome 13, complete sequence Length = 174991 Score = 34.2 bits (17), Expect = 9.6 Identities = 20/21 (95%) Strand = Plus / Plus Query: 3 catccctcccactcctccccc 23 |||||||||||| |||||||| Sbjct: 9915 catccctcccacccctccccc 9935
>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete sequence Length = 176708 Score = 34.2 bits (17), Expect = 9.6 Identities = 17/17 (100%) Strand = Plus / Plus Query: 1 cccatccctcccactcc 17 ||||||||||||||||| Sbjct: 148123 cccatccctcccactcc 148139 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 296,841 Number of Sequences: 3902068 Number of extensions: 296841 Number of successful extensions: 94320 Number of sequences better than 10.0: 338 Number of HSP's better than 10.0 without gapping: 340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93274 Number of HSP's gapped (non-prelim): 1046 length of query: 31 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 11 effective length of database: 17,155,003,908 effective search space: 188705042988 effective search space used: 188705042988 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 17 (34.2 bits)
