>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                         
Query: 67    ctgagctatggacgacttgtggcatctcggagatgagttccgtg 110
             ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 12269 ctgagctatggacaacttgtggcatctcggggatgagttccgtg 12226

>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04,
             complete sequence
          Length = 122599

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                         
Query: 67    ctgagctatggacgacttgtggcatctcggagatgagttccgtg 110
             ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 95386 ctgagctatggacaacttgtggcatctcggggatgagttccgtg 95343

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                            
Query: 67       ctgagctatggacgacttgtggcatctcggagatgagttccgtg 110
                ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 24409596 ctgagctatggacaacttgtggcatctcggggatgagttccgtg 24409553

>dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D18, full
           insert sequence
          Length = 1546

 Score = 71.9 bits (36), Expect = 4e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 67  ctgagctatggacgacttgtggcatctcggagatgagttccgtg 110
           ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 238 ctgagctatggacaacttgtggcatctcggggatgagttccgtg 281

>ref|XM_475495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 74  atggacgacttgtggcatctcggagatgagttccgtg 110
           |||||| |||||||||||||||| |||||||||||||
Sbjct: 1   atggacaacttgtggcatctcggggatgagttccgtg 37

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 37      gggccggatcgagcaggcg 55
               |||||||||||||||||||
Sbjct: 2595765 gggccggatcgagcaggcg 2595747

>gb|AC126006.22| Medicago truncatula clone mth2-4c19, complete sequence
          Length = 154378

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    gcggagagcttgaactgag 71
             |||||||||||||||||||
Sbjct: 34284 gcggagagcttgaactgag 34266

>gb|AC122163.20| Medicago truncatula clone mth2-16l2, complete sequence
          Length = 117439

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 53    gcggagagcttgaactgag 71
             |||||||||||||||||||
Sbjct: 66344 gcggagagcttgaactgag 66362

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 28      ccgaattcggggccggatcgagc 50
               |||| ||||||||||||||||||
Sbjct: 4014792 ccgatttcggggccggatcgagc 4014770

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      cggggccggatcgagcagg 53
               |||||||||||||||||||
Sbjct: 2820484 cggggccggatcgagcagg 2820466

>emb|BX323861.10| Zebrafish DNA sequence from clone CH211-209F23 in linkage group 2,
              complete sequence
          Length = 173663

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 1      tccccttcctcgcagcgccctcc 23
              ||||||||||||||||| |||||
Sbjct: 141958 tccccttcctcgcagcgtcctcc 141980

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 34      tcggggccggatcgagcaggcgg 56
               |||||||| ||||||||||||||
Sbjct: 2815250 tcggggccagatcgagcaggcgg 2815228

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      ggccggatcgagcaggcgg 56
               |||||||||||||||||||
Sbjct: 3045046 ggccggatcgagcaggcgg 3045028

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 38      ggccggatcgagcaggcgg 56
               |||||||||||||||||||
Sbjct: 3680324 ggccggatcgagcaggcgg 3680306

>dbj|AP005131.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-53B2, complete
             sequence
          Length = 162119

 Score = 38.2 bits (19), Expect = 5.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    cttgtggcatctcggagat 100
             |||||||||||||||||||
Sbjct: 63499 cttgtggcatctcggagat 63481


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 502,823
Number of Sequences: 3902068
Number of extensions: 502823
Number of successful extensions: 29738
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29459
Number of HSP's gapped (non-prelim): 279
length of query: 110
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 89
effective length of database: 17,151,101,840
effective search space: 1526448063760
effective search space used: 1526448063760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)