ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194925.1| Oryza sativa (japonica cultivar-group) unknown ... 139 7e-30
2gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome... 139 7e-30
3gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome... 139 7e-30
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
5dbj|AK108770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 7e-30
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 139 7e-30
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 1e-12
8gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 82 1e-12
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 1e-12
10dbj|AK064707.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 1e-12
11gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.30
12emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.30
13dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.30
14gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.2
15ref|NM_186415.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.2
16gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR... 42 1.2
17gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 42 1.2
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
20dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.2
21dbj|BS000227.1| Pan troglodytes chromosome 22 clone:PTB-059D22, ... 42 1.2
22dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
23gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.2
24gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
25emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 42 1.2
26emb|AL663037.13| Mouse DNA sequence from clone RP23-103K12 on ch... 42 1.2
27gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 4.6
28emb|X70354.1|PGLIP P.glumae genes lipA and lipB 40 4.6
29gb|AC124958.13| Medicago truncatula clone mth2-18i11, complete s... 40 4.6
30gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.6
31gb|BT009384.1| Triticum aestivum clone wlm96.pk033.h5:fis, full ... 40 4.6
32emb|AL583926.1|MLEPRTN10 Mycobacterium leprae strain TN complete... 40 4.6
33emb|CR769766.10| Zebrafish DNA sequence from clone DKEY-207J12 i... 40 4.6
34gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.6
35gb|AC144474.22| Medicago truncatula clone mth2-15l5, complete se... 40 4.6
36gb|L78828.1|MSGB983CS Mycobacterium leprae cosmid B983 DNA sequence 40 4.6
37gb|AF069761.1|AF069761 Halobacterium salinarum hydroperoxidase g... 40 4.6
38dbj|AB089690.2| Sphingomonas paucimobilis orf1, ligW2, orf3 gene... 40 4.6
39gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.6
40gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.6
41dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.6
42dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 4.6
43gb|AE005159.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 2... 40 4.6
44emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 4.6
45dbj|AB028210.1| Streptomyces griseus hya and kan genes for hyalu... 40 4.6 
>ref|NM_194925.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNAa0034B05.10), mRNA
          Length = 1125

 Score =  139 bits (70), Expect = 7e-30
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                       
Query: 237 cccgcccgtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgc 296
           ||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |
Sbjct: 153 cccgcccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctc 212

                                                                 
Query: 297 tcacaccgtgccaggcgccggcgggctcggcgccgacttttgctacgtcaaggt 350
            |||||||| || |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 213 gcacaccgtccccggcgccggcgggctcggcgccgacttctgctacgtcgaggt 266



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 175 acgatcgagcgcgtgtccaagcagcagatcctggcgagcatccc 218
           ||||||||||||||   ||||||||||||||| || ||||||||
Sbjct: 79  acgatcgagcgcgtcgtcaagcagcagatcctcgccagcatccc 122
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>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0004E08, complete sequence
          Length = 158294

 Score =  139 bits (70), Expect = 7e-30
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                         
Query: 237   cccgcccgtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgc 296
             ||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |
Sbjct: 33192 cccgcccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctc 33251

                                                                   
Query: 297   tcacaccgtgccaggcgccggcgggctcggcgccgacttttgctacgtcaaggt 350
              |||||||| || |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 33252 gcacaccgtccccggcgccggcgggctcggcgccgacttctgctacgtcgaggt 33305



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 175   acgatcgagcgcgtgtccaagcagcagatcctggcgagcatccc 218
             ||||||||||||||   ||||||||||||||| || ||||||||
Sbjct: 33118 acgatcgagcgcgtcgtcaagcagcagatcctcgccagcatccc 33161
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>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0034B05, complete sequence
          Length = 125655

 Score =  139 bits (70), Expect = 7e-30
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                         
Query: 237   cccgcccgtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgc 296
             ||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |
Sbjct: 98847 cccgcccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctc 98906

                                                                   
Query: 297   tcacaccgtgccaggcgccggcgggctcggcgccgacttttgctacgtcaaggt 350
              |||||||| || |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 98907 gcacaccgtccccggcgccggcgggctcggcgccgacttctgctacgtcgaggt 98960



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 175   acgatcgagcgcgtgtccaagcagcagatcctggcgagcatccc 218
             ||||||||||||||   ||||||||||||||| || ||||||||
Sbjct: 98773 acgatcgagcgcgtcgtcaagcagcagatcctcgccagcatccc 98816
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  139 bits (70), Expect = 7e-30
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                           
Query: 237     cccgcccgtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgc 296
               ||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |
Sbjct: 3442063 cccgcccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctc 3442122

                                                                     
Query: 297     tcacaccgtgccaggcgccggcgggctcggcgccgacttttgctacgtcaaggt 350
                |||||||| || |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 3442123 gcacaccgtccccggcgccggcgggctcggcgccgacttctgctacgtcgaggt 3442176



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 175     acgatcgagcgcgtgtccaagcagcagatcctggcgagcatccc 218
               ||||||||||||||   ||||||||||||||| || ||||||||
Sbjct: 3441989 acgatcgagcgcgtcgtcaagcagcagatcctcgccagcatccc 3442032
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>dbj|AK108770.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H05, full
           insert sequence
          Length = 1436

 Score =  139 bits (70), Expect = 7e-30
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                       
Query: 237 cccgcccgtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgc 296
           ||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |
Sbjct: 227 cccgcccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctc 286

                                                                 
Query: 297 tcacaccgtgccaggcgccggcgggctcggcgccgacttttgctacgtcaaggt 350
            |||||||| || |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 287 gcacaccgtccccggcgccggcgggctcggcgccgacttctgctacgtcgaggt 340



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 175 acgatcgagcgcgtgtccaagcagcagatcctggcgagcatccc 218
           ||||||||||||||   ||||||||||||||| || ||||||||
Sbjct: 153 acgatcgagcgcgtcgtcaagcagcagatcctcgccagcatccc 196
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  139 bits (70), Expect = 7e-30
 Identities = 103/114 (90%)
 Strand = Plus / Plus

                                                                           
Query: 237     cccgcccgtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgc 296
               ||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||| |
Sbjct: 3441984 cccgcccgtgctgttcctcacctcgccgtccggcaagtacgcggcgtacttcgtgcgctc 3442043

                                                                     
Query: 297     tcacaccgtgccaggcgccggcgggctcggcgccgacttttgctacgtcaaggt 350
                |||||||| || |||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 3442044 gcacaccgtccccggcgccggcgggctcggcgccgacttctgctacgtcgaggt 3442097



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                           
Query: 175     acgatcgagcgcgtgtccaagcagcagatcctggcgagcatccc 218
               ||||||||||||||   ||||||||||||||| || ||||||||
Sbjct: 3441910 acgatcgagcgcgtcgtcaagcagcagatcctcgccagcatccc 3441953
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                           
Query: 244     gtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgctcacacc 303
               ||||||||||| ||||| || || ||||||||| |||| |||||| |||||   || |||
Sbjct: 7652169 gtgctgttcctgacgtcgccgtcgggcaagtacacggcgtacttcctgcgcagccagacc 7652110

                                                        
Query: 304     gtgccaggcgccggcgggctcggcgccgacttttgctacgt 344
               | ||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 7652109 gcgccgggcgccggcggcctcggcgccgacttctgctacgt 7652069



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 193     aagcagcagatcctggcgagcatccc 218
               ||||||||||||||||| ||||||||
Sbjct: 7652217 aagcagcagatcctggccagcatccc 7652192
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>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                         
Query: 244   gtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgctcacacc 303
             ||||||||||| ||||| || || ||||||||| |||| |||||| |||||   || |||
Sbjct: 63121 gtgctgttcctgacgtcgccgtcgggcaagtacacggcgtacttcctgcgcagccagacc 63180

                                                      
Query: 304   gtgccaggcgccggcgggctcggcgccgacttttgctacgt 344
             | ||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 63181 gcgccgggcgccggcggcctcggcgccgacttctgctacgt 63221



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 193   aagcagcagatcctggcgagcatccc 218
             ||||||||||||||||| ||||||||
Sbjct: 63073 aagcagcagatcctggccagcatccc 63098
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                           
Query: 244     gtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgctcacacc 303
               ||||||||||| ||||| || || ||||||||| |||| |||||| |||||   || |||
Sbjct: 7650004 gtgctgttcctgacgtcgccgtcgggcaagtacacggcgtacttcctgcgcagccagacc 7649945

                                                        
Query: 304     gtgccaggcgccggcgggctcggcgccgacttttgctacgt 344
               | ||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 7649944 gcgccgggcgccggcggcctcggcgccgacttctgctacgt 7649904



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 193     aagcagcagatcctggcgagcatccc 218
               ||||||||||||||||| ||||||||
Sbjct: 7650052 aagcagcagatcctggccagcatccc 7650027
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>dbj|AK064707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A07, full
           insert sequence
          Length = 1269

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 86/101 (85%)
 Strand = Plus / Plus

                                                                       
Query: 244 gtgctgttcctcacgtctccctccggcaagtacgcggcctacttcatgcgcgctcacacc 303
           ||||||||||| ||||| || || ||||||||| |||| |||||| |||||   || |||
Sbjct: 267 gtgctgttcctgacgtcgccgtcgggcaagtacacggcgtacttcctgcgcagccagacc 326

                                                    
Query: 304 gtgccaggcgccggcgggctcggcgccgacttttgctacgt 344
           | ||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 327 gcgccgggcgccggcggcctcggcgccgacttctgctacgt 367



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 193 aagcagcagatcctggcgagcatccc 218
           ||||||||||||||||| ||||||||
Sbjct: 219 aagcagcagatcctggccagcatccc 244
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 310    ggcgccggcgggctcggcgccg 331
              ||||||||||||||||||||||
Sbjct: 838601 ggcgccggcgggctcggcgccg 838622
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 310    ggcgccggcgggctcggcgccg 331
              ||||||||||||||||||||||
Sbjct: 171236 ggcgccggcgggctcggcgccg 171257
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 150     cacggccgcgacggcgccggccggcacgat 179
               |||||| ||||||||||||||| |||||||
Sbjct: 2352601 cacggcggcgacggcgccggccagcacgat 2352572
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 152    cggccgcgacggcgccggccg 172
              |||||||||||||||||||||
Sbjct: 867434 cggccgcgacggcgccggccg 867414
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>ref|NM_186415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 858

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 152 cggccgcgacggcgccggccg 172
           |||||||||||||||||||||
Sbjct: 551 cggccgcgacggcgccggccg 571
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>gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR4), PlmR3 (plmR3),
             PlmR2 (plmR2), Plm8 (plm8), Plm4 (plm4), Plm5 (plm5), Plm6
             (plm6), Plm7 (plm7), PlmT8 (plmT8), PlmT7 (plmT7), PlmT6
             (plmT6), PlmT5 (plmT5), PlmT4 (plmT4), PlmT3 (plmT3),
             PlmT2 (plmT2), PlmT1 (plmT1), Plm1 (plm1), Plm2-3
             (plm2-3), PlmJK (plmJK), PlmL (plmL), ChcA (chcA), PlmM
             (plmM), PlmR1 (plmR1), PlmI (plmI), PlmS2 (plmS2), PlmS3
             (plmS3), and PlmS4 (plmS4) genes, complete cds
          Length = 76196

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 152   cggccgcgacggcgccggccg 172
             |||||||||||||||||||||
Sbjct: 43502 cggccgcgacggcgccggccg 43522
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>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 224930

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     tccacaaccacaacacagcca 27
             |||||||||||||||||||||
Sbjct: 39622 tccacaaccacaacacagcca 39642
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 311      gcgccggcgggctcggcgccg 331
                |||||||||||||||||||||
Sbjct: 24190436 gcgccggcgggctcggcgccg 24190456



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 312      cgccggcgggctcggcgccg 331
                ||||||||||||||||||||
Sbjct: 24215661 cgccggcgggctcggcgccg 24215680
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 152     cggccgcgacggcgccggccg 172
               |||||||||||||||||||||
Sbjct: 3353592 cggccgcgacggcgccggccg 3353572
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 305     tgccaggcgccggcgggctcggcgccgac 333
               |||||||||||||||||| ||||| ||||
Sbjct: 3391121 tgccaggcgccggcgggcgcggcgtcgac 3391093
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>dbj|BS000227.1| Pan troglodytes chromosome 22 clone:PTB-059D22, map 22, complete
              sequences
          Length = 148847

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     aacacagccacagcccacgga 38
              |||||||||||||||||||||
Sbjct: 133248 aacacagccacagcccacgga 133268
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 152    cggccgcgacggcgccggccg 172
              |||||||||||||||||||||
Sbjct: 163285 cggccgcgacggcgccggccg 163265
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 152     cggccgcgacggcgccggccg 172
               |||||||||||||||||||||
Sbjct: 1190267 cggccgcgacggcgccggccg 1190247
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 311      gcgccggcgggctcggcgccg 331
                |||||||||||||||||||||
Sbjct: 24118642 gcgccggcgggctcggcgccg 24118662



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 312      cgccggcgggctcggcgccg 331
                ||||||||||||||||||||
Sbjct: 24143867 cgccggcgggctcggcgccg 24143886
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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   gcgccggcgggctcggcgccg 331
             |||||||||||||||||||||
Sbjct: 75127 gcgccggcgggctcggcgccg 75147



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cgccggcgggctcggcgccg 331
              ||||||||||||||||||||
Sbjct: 100352 cgccggcgggctcggcgccg 100371
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>emb|AL663037.13| Mouse DNA sequence from clone RP23-103K12 on chromosome 4, complete
            sequence
          Length = 246021

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 8    ccacaaccacaacacagccacagcc 32
            ||||||||||| |||||||||||||
Sbjct: 2461 ccacaaccacagcacagccacagcc 2437
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 152     cggccgcgacggcgccggcc 171
               ||||||||||||||||||||
Sbjct: 1072606 cggccgcgacggcgccggcc 1072625
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>emb|X70354.1|PGLIP P.glumae genes lipA and lipB
          Length = 2900

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  ccgcgacggcgccggccggc 174
            ||||||||||||||||||||
Sbjct: 1721 ccgcgacggcgccggccggc 1702
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>gb|AC124958.13| Medicago truncatula clone mth2-18i11, complete sequence
          Length = 120562

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    caagcacacaagcaagaaac 62
             ||||||||||||||||||||
Sbjct: 65234 caagcacacaagcaagaaac 65215
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 163     gcgccggccggcacgatcgagcgc 186
               |||||||||||||||||| |||||
Sbjct: 2230977 gcgccggccggcacgatccagcgc 2230954



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    ggcgccggcgggctcggcgc 329
              ||||||||||||||||||||
Sbjct: 247006 ggcgccggcgggctcggcgc 247025
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>gb|BT009384.1| Triticum aestivum clone wlm96.pk033.h5:fis, full insert mRNA
           sequence
          Length = 2653

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 acggccgcgacggcgccggc 170
           ||||||||||||||||||||
Sbjct: 775 acggccgcgacggcgccggc 756
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>emb|AL583926.1|MLEPRTN10 Mycobacterium leprae strain TN complete genome; segment 10/10
          Length = 269203

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   cgccggccggcacgatcgag 183
             ||||||||||||||||||||
Sbjct: 97607 cgccggccggcacgatcgag 97588
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>emb|CR769766.10| Zebrafish DNA sequence from clone DKEY-207J12 in linkage group 2,
             complete sequence
          Length = 201113

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 266   ccggcaagtacgcggcctacttca 289
             ||||||||||| ||||||||||||
Sbjct: 32871 ccggcaagtactcggcctacttca 32848
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    ggcgccggcgggctcggcgc 329
              ||||||||||||||||||||
Sbjct: 389467 ggcgccggcgggctcggcgc 389448
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>gb|AC144474.22| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 142202

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    caagcacacaagcaagaaac 62
             ||||||||||||||||||||
Sbjct: 55328 caagcacacaagcaagaaac 55347
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>gb|L78828.1|MSGB983CS Mycobacterium leprae cosmid B983 DNA sequence
          Length = 36788

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   cgccggccggcacgatcgag 183
             ||||||||||||||||||||
Sbjct: 12599 cgccggccggcacgatcgag 12580
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>gb|AF069761.1|AF069761 Halobacterium salinarum hydroperoxidase gene, complete cds
          Length = 3508

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  ggcgccggcgggctcggcgccgac 333
            |||| |||||||||||||||||||
Sbjct: 1749 ggcggcggcgggctcggcgccgac 1726
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>dbj|AB089690.2| Sphingomonas paucimobilis orf1, ligW2, orf3 genes for putative
            vanillin dehydrogenase, 5-carboxyvanillic acid
            decarboxylse, 5-carboxyvanillic acid transport protein,
            complete cds
          Length = 4891

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  gcgacggcgccggccggcac 176
            ||||||||||||||||||||
Sbjct: 3483 gcgacggcgccggccggcac 3502
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    ggcgccggcgggctcggcgc 329
              ||||||||||||||||||||
Sbjct: 696145 ggcgccggcgggctcggcgc 696126
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 163     gcgccggccggcacgatcgagcgc 186
               |||||||||||||||||| |||||
Sbjct: 1794039 gcgccggccggcacgatccagcgc 1794016



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 151     acggccgcgacggcgccggccggc 174
               |||||||||||| |||||||||||
Sbjct: 1558743 acggccgcgacgccgccggccggc 1558720



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 154     gccgcgacggcgccggccggcacg 177
               |||| |||||||||||||||||||
Sbjct: 1412466 gccgtgacggcgccggccggcacg 1412489
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 310    ggcgccggcgggctcggcgc 329
              ||||||||||||||||||||
Sbjct: 820047 ggcgccggcgggctcggcgc 820066
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     ccggcgggctcggcgccgac 333
               ||||||||||||||||||||
Sbjct: 3058433 ccggcgggctcggcgccgac 3058414
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>gb|AE005159.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 20 of 32 of the
            complete genome
          Length = 11050

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 310  ggcgccggcgggctcggcgccgac 333
            |||| |||||||||||||||||||
Sbjct: 8789 ggcggcggcgggctcggcgccgac 8812
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     ggccgcgacggcgccggccg 172
               ||||||||||||||||||||
Sbjct: 3684720 ggccgcgacggcgccggccg 3684701
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>dbj|AB028210.1| Streptomyces griseus hya and kan genes for hyaluronidase and
            aminoglycoside 3-N-acetyltransferase, complete cds
          Length = 4265

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  tcacggccgcgacggcgccg 168
            ||||||||||||||||||||
Sbjct: 1953 tcacggccgcgacggcgccg 1972


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,119,597
Number of Sequences: 3902068
Number of extensions: 2119597
Number of successful extensions: 53763
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51715
Number of HSP's gapped (non-prelim): 2048
length of query: 350
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 328
effective length of database: 17,147,199,772
effective search space: 5624281525216
effective search space used: 5624281525216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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