Clone Name | bart61h09 |
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Clone Library Name | barley_pub |
>IER5_MOUSE (O89113) Immediate early response gene 5 protein| Length = 308 Score = 31.6 bits (70), Expect = 0.80 Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 17/86 (19%) Frame = -3 Query: 235 EMLLGTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGW-------QRTDATP 77 E L G E + W R A GS G RA+RR CG D +P Sbjct: 131 EALRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSP 190 Query: 76 APPVG----------GGAMARSLSPG 29 APP GG A +PG Sbjct: 191 APPAPCPRKRGAAGVGGGRASCSAPG 216
>LRC4B_MOUSE (P0C192) Leucine-rich repeat-containing protein 4B precursor| Length = 709 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -1 Query: 393 GGSLSRPRGQHREPRLPRPQGAWAAGR 313 G +PRG +EP P GAW GR Sbjct: 499 GEEAQQPRGTEKEPPGPTTDGAWGGGR 525
>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703| Length = 590 Score = 30.0 bits (66), Expect = 2.3 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = -3 Query: 223 GTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPAPPVGG--GAM 50 G G+S K SG S V + + S GD+AG R C P PP G A Sbjct: 162 GGGDSRKDSG--SSSVSSTSSSSSSSPGDKAGFRVPSAAC-------PPFPPHGAPVSAS 212 Query: 49 ARSLSPGLGR 20 + S SPG R Sbjct: 213 SSSSSPGGSR 222
>ALU8_HUMAN (P39195) Alu subfamily SX sequence contamination warning entry| Length = 591 Score = 28.9 bits (63), Expect = 5.2 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Frame = -3 Query: 226 LGTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALR--------RMCGWQRTDATPAP 71 + T ++ W R+ V ATREA+ E GRR L+ G + Sbjct: 38 VSTKNTKISRAWWRAPVIPATREAEAGESLEPGRRRLQXAEIAPLHSSLGDRARLRLKKX 97 Query: 70 PVGGGAMARSLSPGLGRIWD 11 GG AR L+P + +W+ Sbjct: 98 XXAGGGRARWLTPVIPALWE 117
>LRC4B_HUMAN (Q9NT99) Leucine-rich repeat-containing protein 4B precursor| Length = 713 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -1 Query: 393 GGSLSRPRGQHREPRLPRPQGAWAAGRCG 307 G +PRG +EP P G W GR G Sbjct: 500 GEEALQPRGTEKEPPGPTTDGVWGGGRPG 528
>KCT2_MOUSE (Q8K201) Keratinocytes-associated transmembrane protein 2 precursor| Length = 259 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = -3 Query: 121 ALRRMCGWQRTDATPAPPVGG-GAMARSL 38 AL RMCG R +P P G GA+ARSL Sbjct: 5 ALGRMCGAAREKLSPGPGARGLGALARSL 33
>SOAT2_HUMAN (O75908) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol| acyltransferase 2) (Acyl coenzyme A:cholesterol acyltransferase 2) (ACAT-2) Length = 522 Score = 28.5 bits (62), Expect = 6.7 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 7/93 (7%) Frame = -3 Query: 277 VKRERTGMWEVEEEEMLLGTGESEKRSG-----WTRSGVEVATREAKGSSGD--EAGRRA 119 ++ +RT E E G G +E WTR V + + + G E RA Sbjct: 8 LRLQRTEGLGGERERQPCGDGNTETHRAPDLVQWTRHMEAVKAQLLEQAQGQLRELLDRA 67 Query: 118 LRRMCGWQRTDATPAPPVGGGAMARSLSPGLGR 20 +R + P PP G+++R+ P LG+ Sbjct: 68 MREAIQSYPSQDKPLPPPPPGSLSRTQEPSLGK 100
>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) Length = 1264 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/66 (27%), Positives = 32/66 (48%) Frame = -3 Query: 253 WEVEEEEMLLGTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPA 74 W ++++ +G+ G+ S + + +G GD+ GR + R+ G +T A Sbjct: 76 WRGDDDDEPPLSGDDPLAGGFGFSFRSKSAWQERG--GDDCGRGSRRQRRGAAGGGSTRA 133 Query: 73 PPVGGG 56 PP GGG Sbjct: 134 PPAGGG 139
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = -3 Query: 202 RSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPAPPVGGG 56 RS W G GD+ GR + RR G ++ APP GGG Sbjct: 117 RSAWQERG------------GDDCGRGSRRRRRGAAGGGSSRAPPAGGG 153
>CHB_SERMA (Q54468) Chitobiase precursor (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 885 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 100 WQRTDATPAPPVGGGAMARSLSP 32 WQR DA P V G RS+SP Sbjct: 852 WQRYDAKAKPAVSGEVQVRSVSP 874
>Y2548_DEIRA (Q9RRE4) UPF0082 protein DR2548| Length = 244 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/67 (23%), Positives = 31/67 (46%) Frame = -3 Query: 223 GTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPAPPVGGGAMAR 44 G + ++ + +++ + G SGD AG +L+ +TD PA + A+ R Sbjct: 15 GANDKKRSAMYSKHIRAIQAAVRSGGSGDPAGNLSLKNAIAAAKTDTVPADNI-ENAIKR 73 Query: 43 SLSPGLG 23 ++ G G Sbjct: 74 AVGAGEG 80
>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) (HEST2) (Telomerase-associated protein 2) (TP2) Length = 1132 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 9/39 (23%) Frame = -1 Query: 411 PAACRRGGSLSRP--------RGQHREP-RLPRPQGAWA 322 P A RRGGS SR RG EP R P QG+WA Sbjct: 219 PGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWA 257
>RFIP1_RAT (Q3B7T9) Rab11 family-interacting protein 1 (Rab11-FIP1)| (Rab-coupling protein) Length = 648 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Frame = -3 Query: 211 SEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQR-----TDATPAPPV 65 ++ R G + + +EVAT+E K S E+ + +L + ++ ++ P PPV Sbjct: 408 ADSREGLSPANMEVATKETKDSKKQESKKSSLLSLVTGKKDVAKGSEGEPLPPV 461 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,929,949 Number of Sequences: 219361 Number of extensions: 493212 Number of successful extensions: 2191 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2095 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2189 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)