ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IER5_MOUSE (O89113) Immediate early response gene 5 protein 32 0.80
2LRC4B_MOUSE (P0C192) Leucine-rich repeat-containing protein 4B p... 30 2.3
3ZN703_HUMAN (Q9H7S9) Zinc finger protein 703 30 2.3
4ALU8_HUMAN (P39195) Alu subfamily SX sequence contamination warn... 29 5.2
5LRC4B_HUMAN (Q9NT99) Leucine-rich repeat-containing protein 4B p... 29 5.2
6KCT2_MOUSE (Q8K201) Keratinocytes-associated transmembrane prote... 29 5.2
7SOAT2_HUMAN (O75908) Sterol O-acyltransferase 2 (EC 2.3.1.26) (C... 28 6.7
8ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Aden... 28 6.7
9ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Aden... 28 6.7
10CHB_SERMA (Q54468) Chitobiase precursor (EC 3.2.1.52) (N-acetyl-... 28 8.8
11Y2548_DEIRA (Q9RRE4) UPF0082 protein DR2548 28 8.8
12TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.4... 28 8.8
13RFIP1_RAT (Q3B7T9) Rab11 family-interacting protein 1 (Rab11-FIP... 28 8.8

>IER5_MOUSE (O89113) Immediate early response gene 5 protein|
          Length = 308

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 26/86 (30%), Positives = 30/86 (34%), Gaps = 17/86 (19%)
 Frame = -3

Query: 235 EMLLGTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGW-------QRTDATP 77
           E L G  E    + W R     A     GS     G RA+RR CG           D +P
Sbjct: 131 EALRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSP 190

Query: 76  APPVG----------GGAMARSLSPG 29
           APP            GG  A   +PG
Sbjct: 191 APPAPCPRKRGAAGVGGGRASCSAPG 216



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>LRC4B_MOUSE (P0C192) Leucine-rich repeat-containing protein 4B precursor|
          Length = 709

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 393 GGSLSRPRGQHREPRLPRPQGAWAAGR 313
           G    +PRG  +EP  P   GAW  GR
Sbjct: 499 GEEAQQPRGTEKEPPGPTTDGAWGGGR 525



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>ZN703_HUMAN (Q9H7S9) Zinc finger protein 703|
          Length = 590

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
 Frame = -3

Query: 223 GTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPAPPVGG--GAM 50
           G G+S K SG   S V   +  +  S GD+AG R     C        P PP G    A 
Sbjct: 162 GGGDSRKDSG--SSSVSSTSSSSSSSPGDKAGFRVPSAAC-------PPFPPHGAPVSAS 212

Query: 49  ARSLSPGLGR 20
           + S SPG  R
Sbjct: 213 SSSSSPGGSR 222



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>ALU8_HUMAN (P39195) Alu subfamily SX sequence contamination warning entry|
          Length = 591

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
 Frame = -3

Query: 226 LGTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALR--------RMCGWQRTDATPAP 71
           + T  ++    W R+ V  ATREA+     E GRR L+           G +        
Sbjct: 38  VSTKNTKISRAWWRAPVIPATREAEAGESLEPGRRRLQXAEIAPLHSSLGDRARLRLKKX 97

Query: 70  PVGGGAMARSLSPGLGRIWD 11
              GG  AR L+P +  +W+
Sbjct: 98  XXAGGGRARWLTPVIPALWE 117



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>LRC4B_HUMAN (Q9NT99) Leucine-rich repeat-containing protein 4B precursor|
          Length = 713

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 393 GGSLSRPRGQHREPRLPRPQGAWAAGRCG 307
           G    +PRG  +EP  P   G W  GR G
Sbjct: 500 GEEALQPRGTEKEPPGPTTDGVWGGGRPG 528



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>KCT2_MOUSE (Q8K201) Keratinocytes-associated transmembrane protein 2 precursor|
          Length = 259

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 121 ALRRMCGWQRTDATPAPPVGG-GAMARSL 38
           AL RMCG  R   +P P   G GA+ARSL
Sbjct: 5   ALGRMCGAAREKLSPGPGARGLGALARSL 33



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>SOAT2_HUMAN (O75908) Sterol O-acyltransferase 2 (EC 2.3.1.26) (Cholesterol|
           acyltransferase 2) (Acyl coenzyme A:cholesterol
           acyltransferase 2) (ACAT-2)
          Length = 522

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
 Frame = -3

Query: 277 VKRERTGMWEVEEEEMLLGTGESEKRSG-----WTRSGVEVATREAKGSSGD--EAGRRA 119
           ++ +RT     E E    G G +E         WTR    V  +  + + G   E   RA
Sbjct: 8   LRLQRTEGLGGERERQPCGDGNTETHRAPDLVQWTRHMEAVKAQLLEQAQGQLRELLDRA 67

Query: 118 LRRMCGWQRTDATPAPPVGGGAMARSLSPGLGR 20
           +R       +   P PP   G+++R+  P LG+
Sbjct: 68  MREAIQSYPSQDKPLPPPPPGSLSRTQEPSLGK 100



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>ADCY5_RABIT (P40144) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1264

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = -3

Query: 253 WEVEEEEMLLGTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPA 74
           W  ++++    +G+     G+  S    +  + +G  GD+ GR + R+  G     +T A
Sbjct: 76  WRGDDDDEPPLSGDDPLAGGFGFSFRSKSAWQERG--GDDCGRGSRRQRRGAAGGGSTRA 133

Query: 73  PPVGGG 56
           PP GGG
Sbjct: 134 PPAGGG 139



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>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
           (Ca(2+)-inhibitable adenylyl cyclase)
          Length = 1265

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/49 (34%), Positives = 21/49 (42%)
 Frame = -3

Query: 202 RSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPAPPVGGG 56
           RS W   G            GD+ GR + RR  G     ++ APP GGG
Sbjct: 117 RSAWQERG------------GDDCGRGSRRRRRGAAGGGSSRAPPAGGG 153



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>CHB_SERMA (Q54468) Chitobiase precursor (EC 3.2.1.52)|
           (N-acetyl-beta-glucosaminidase)
           (Beta-N-acetylhexosaminidase)
          Length = 885

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -3

Query: 100 WQRTDATPAPPVGGGAMARSLSP 32
           WQR DA   P V G    RS+SP
Sbjct: 852 WQRYDAKAKPAVSGEVQVRSVSP 874



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>Y2548_DEIRA (Q9RRE4) UPF0082 protein DR2548|
          Length = 244

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/67 (23%), Positives = 31/67 (46%)
 Frame = -3

Query: 223 GTGESEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQRTDATPAPPVGGGAMAR 44
           G  + ++ + +++    +      G SGD AG  +L+      +TD  PA  +   A+ R
Sbjct: 15  GANDKKRSAMYSKHIRAIQAAVRSGGSGDPAGNLSLKNAIAAAKTDTVPADNI-ENAIKR 73

Query: 43  SLSPGLG 23
           ++  G G
Sbjct: 74  AVGAGEG 80



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>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase|
           catalytic subunit) (HEST2) (Telomerase-associated
           protein 2) (TP2)
          Length = 1132

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 9/39 (23%)
 Frame = -1

Query: 411 PAACRRGGSLSRP--------RGQHREP-RLPRPQGAWA 322
           P A RRGGS SR         RG   EP R P  QG+WA
Sbjct: 219 PGARRRGGSASRSLPLPKRPRRGAAPEPERTPVGQGSWA 257



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>RFIP1_RAT (Q3B7T9) Rab11 family-interacting protein 1 (Rab11-FIP1)|
           (Rab-coupling protein)
          Length = 648

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 211 SEKRSGWTRSGVEVATREAKGSSGDEAGRRALRRMCGWQR-----TDATPAPPV 65
           ++ R G + + +EVAT+E K S   E+ + +L  +   ++     ++  P PPV
Sbjct: 408 ADSREGLSPANMEVATKETKDSKKQESKKSSLLSLVTGKKDVAKGSEGEPLPPV 461


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,929,949
Number of Sequences: 219361
Number of extensions: 493212
Number of successful extensions: 2191
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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