ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
3emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 121 2e-24
4emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 46 0.091
5gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
7dbj|AK120526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
8dbj|AK107169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
9gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.36
10gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
11ref|XM_587052.2| PREDICTED: Bos taurus similar to leiomodin 3 (f... 42 1.4
12gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome... 42 1.4
13emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.4
14emb|BX640433.1| Bordetella parapertussis strain 12822, complete ... 42 1.4
15emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 42 1.4
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.4
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
19dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21ref|NM_208355.1| Eremothecium gossypii ABR056Cp (ABR056C), mRNA 42 1.4
22gb|AC140217.3| Mus musculus BAC clone RP23-279O5 from 8, complet... 42 1.4
23gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.4
24gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.6
25ref|XM_465866.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
26ref|XM_465867.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
27gb|AY186678.1| Cancer magister clone Cma50 microsatellite sequence 40 5.6
28gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
29gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, com... 40 5.6
30ref|XM_323855.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
31ref|XM_427117.1| PREDICTED: Gallus gallus similar to putative mi... 40 5.6
32ref|XM_951821.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
33ref|XM_877434.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 5.6
34ref|NM_001001806.2| Mus musculus zinc finger protein 36, C3H typ... 40 5.6
35gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome 40 5.6
36gb|AC132455.3| Mus musculus BAC clone RP23-129K10 from chromosom... 40 5.6
37gb|BC006189.1| Mus musculus zinc finger protein 36, C3H type-lik... 40 5.6
38gb|BC028330.1| Mus musculus zinc finger protein 36, C3H type-lik... 40 5.6
39gb|AF424647.1| Phytophthora infestans clone MY-05-B-09 argininos... 40 5.6
40emb|BX013808.1|CNS08ITG Single read from an extremity of a full-... 40 5.6
41emb|BX013807.1|CNS08ITF Single read from an extremity of a full-... 40 5.6
42emb|X81375.1|TTRPL11 T.thermophilus gene for rpL11, rpL 1 40 5.6
43emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4,... 40 5.6
44gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, co... 40 5.6
45gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, co... 40 5.6
46dbj|AK094320.1| Homo sapiens cDNA FLJ37001 fis, clone BRACE2008172 40 5.6
47dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.6
48dbj|AK142565.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 40 5.6
49dbj|AK160955.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 5.6
50ref|XM_689818.1| PREDICTED: Danio rerio similar to CG8176-PB, is... 40 5.6
51dbj|AK159513.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 5.6
52emb|CR524094.1| Gallus gallus finished cDNA, clone ChEST257g6 40 5.6
53dbj|AK170763.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 5.6
54gb|BC038863.1| Mus musculus zinc finger protein 36, C3H type-lik... 40 5.6
55dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
56dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
58dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
59gb|AF205223.1|AF205223 Mus musculus TIS11D insertion variant (Br... 40 5.6
60gb|AF205222.1|AF205222 Mus musculus TIS11D deletion variant (Brf... 40 5.6
61gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, comple... 40 5.6
62ref|NM_204919.1| Gallus gallus putative microtubule associated p... 40 5.6
63dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
64dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.6
65emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, ... 40 5.6
66emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in ... 40 5.6
67dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
68dbj|AK120677.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
69ref|XM_562819.1| Anopheles gambiae str. PEST ENSANGP00000026097 ... 40 5.6
70ref|XM_312750.2| Anopheles gambiae str. PEST ENSANGP00000020330 ... 40 5.6
71ref|XM_312672.2| Anopheles gambiae str. PEST ENSANGP00000023029 ... 40 5.6
72dbj|AB090821.1| Anopheles gambiae retrotransposon R7Ag2 DNA, com... 40 5.6
73gb|AF038560.1|AF038560 Gallus gallus putative microtubule associ... 40 5.6
74gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
75gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.6
76gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome... 40 5.6
77gb|M58564.1|MUSTIS11D Mouse TIS11 primary response gene, complet... 40 5.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                            
Query: 239      ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 298
                ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 21671156 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 21671215

                                                                            
Query: 299      ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 358
                |  ||| ||||||||||||||||||||| |||| ||    ||||| || | || ||| ||
Sbjct: 21671216 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 21671275

                                                                            
Query: 359      cggtgttgacctcgaggtcgagacaaagaacctcctcgacggcacgcagctgggggacag 418
                ||| |||||||||||||| ||||| |  | |||||||| ||| |||||||| ||||||||
Sbjct: 21671276 cggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacag 21671335

                 
Query: 419      c 419
                |
Sbjct: 21671336 c 21671336
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Plus

                                                                            
Query: 239      ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 298
                ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 21599501 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 21599560

                                                                            
Query: 299      ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 358
                |  ||| ||||||||||||||||||||| |||| ||    ||||| || | || ||| ||
Sbjct: 21599561 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 21599620

                                                                            
Query: 359      cggtgttgacctcgaggtcgagacaaagaacctcctcgacggcacgcagctgggggacag 418
                ||| |||||||||||||| ||||| |  | |||||||| ||| |||||||| ||||||||
Sbjct: 21599621 cggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacag 21599680

                 
Query: 419      c 419
                |
Sbjct: 21599681 c 21599681
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  121 bits (61), Expect = 2e-24
 Identities = 151/181 (83%)
 Strand = Plus / Minus

                                                                          
Query: 239    ctcctcgacctcccacatccccgtccgctccctcttcaccgggatagtcgaggaggtcgg 298
              ||||||| | || ||| ||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 141395 ctcctcgccgtcgcacgtccccgtccgctccctcttcaccggcatcgtcgaggacgtcgg 141336

                                                                          
Query: 299    ccgcgtacgccgcatcggcccgccgcccacgccccctgggggcgggggagacgcggctcc 358
              |  ||| ||||||||||||||||||||| |||| ||    ||||| || | || ||| ||
Sbjct: 141335 caccgtccgccgcatcggcccgccgcccgcgccgccctccggcggcggcggcgaggcccc 141276

                                                                          
Query: 359    cggtgttgacctcgaggtcgagacaaagaacctcctcgacggcacgcagctgggggacag 418
              ||| |||||||||||||| ||||| |  | |||||||| ||| |||||||| ||||||||
Sbjct: 141275 cggcgttgacctcgaggtggagacgagcaccctcctcgccgggacgcagctcggggacag 141216

               
Query: 419    c 419
              |
Sbjct: 141215 c 141215
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 63      cccaccggcggcgcgggcgtggc 85
               |||||||||||||||||||||||
Sbjct: 1300548 cccaccggcggcgcgggcgtggc 1300526



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 308     ccgcatcggcccgccgcccacgcc 331
               ||||||||||| ||||||||||||
Sbjct: 1919686 ccgcatcggcctgccgcccacgcc 1919709
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>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 55    cgccgccgcccaccggcggcgcgggc 80
             |||||||| |||||||||||||||||
Sbjct: 74125 cgccgccggccaccggcggcgcgggc 74100
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 55       cgccgccgcccaccggcggcgcgggc 80
                |||||||| |||||||||||||||||
Sbjct: 18434288 cgccgccggccaccggcggcgcgggc 18434263



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 223      ccaagagcatctcctcctcctcgacctcc 251
                |||||||| ||||||||||||| ||||||
Sbjct: 15456341 ccaagagcttctcctcctcctccacctcc 15456369
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>dbj|AK120526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127B22, full
           insert sequence
          Length = 2156

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 55  cgccgccgcccaccggcggcgcgggc 80
           |||||||| |||||||||||||||||
Sbjct: 298 cgccgccggccaccggcggcgcgggc 323
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>dbj|AK107169.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-F12, full
           insert sequence
          Length = 2424

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 55  cgccgccgcccaccggcggcgcgggc 80
           |||||||| |||||||||||||||||
Sbjct: 468 cgccgccggccaccggcggcgcgggc 493
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 52     tggcgccgccgcccaccggcggcgcgggcg 81
              |||||||||||||| ||||||||| |||||
Sbjct: 167827 tggcgccgccgccctccggcggcgggggcg 167798



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 312     atcggcccgccgcccacgcc 331
               ||||||||||||||||||||
Sbjct: 1129712 atcggcccgccgcccacgcc 1129693
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>gb|AC117264.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_D04,
              complete sequence
          Length = 168424

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 223    ccaagagcatctcctcctcctcgacctcc 251
              |||||||| ||||||||||||| ||||||
Sbjct: 111362 ccaagagcttctcctcctcctccacctcc 111390
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>ref|XM_587052.2| PREDICTED: Bos taurus similar to leiomodin 3 (fetal) (LOC509978),
            mRNA
          Length = 2012

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 233  ctcctcctcctcgacctccca 253
            |||||||||||||||||||||
Sbjct: 1367 ctcctcctcctcgacctccca 1387
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>gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome 8, complete sequence
          Length = 209383

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   tccccaagagcatctcctcctcctc 244
             ||||||||| |||||||||||||||
Sbjct: 54815 tccccaagatcatctcctcctcctc 54791
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>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     cgccatggcgccgccgcccaccggc 71
              ||||||||||||| |||||||||||
Sbjct: 149437 cgccatggcgccggcgcccaccggc 149461
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>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 47    cgccatggcgccgccgcccaccggc 71
             ||||||||||||| |||||||||||
Sbjct: 85930 cgccatggcgccggcgcccaccggc 85954
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     cgccatggcgccgccgcccaccggc 71
              ||||||||||||| |||||||||||
Sbjct: 152573 cgccatggcgccggcgcccaccggc 152597
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 45       ctcgccatggcgccgccgccc 65
                |||||||||||||||||||||
Sbjct: 28602195 ctcgccatggcgccgccgccc 28602215
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 57      ccgccgcccaccggcggcgcgggcg 81
               |||||||||||||||||||| ||||
Sbjct: 1772689 ccgccgcccaccggcggcgccggcg 1772665
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 61      cgcccaccggcggcgcgggcg 81
               |||||||||||||||||||||
Sbjct: 2397080 cgcccaccggcggcgcgggcg 2397060



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      caccggcggcgcgggcgtgg 84
               ||||||||||||||||||||
Sbjct: 3207358 caccggcggcgcgggcgtgg 3207339
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    ctcgccatggcgccgccgccc 65
             |||||||||||||||||||||
Sbjct: 93673 ctcgccatggcgccgccgccc 93693
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0622F03
          Length = 170064

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 45   ctcgccatggcgccgccgccc 65
            |||||||||||||||||||||
Sbjct: 2761 ctcgccatggcgccgccgccc 2781
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>ref|NM_208355.1| Eremothecium gossypii ABR056Cp (ABR056C), mRNA
          Length = 1470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 55  cgccgccgcccaccggcggcg 75
           |||||||||||||||||||||
Sbjct: 860 cgccgccgcccaccggcggcg 880
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>gb|AC140217.3| Mus musculus BAC clone RP23-279O5 from 8, complete sequence
          Length = 224205

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 220    tccccaagagcatctcctcctcctc 244
              ||||||||| |||||||||||||||
Sbjct: 149755 tccccaagatcatctcctcctcctc 149731
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>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     cgccgccgcccaccggcggcg 75
              |||||||||||||||||||||
Sbjct: 498803 cgccgccgcccaccggcggcg 498783
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    cttcgcctcccgggtggcca 171
              ||||||||||||||||||||
Sbjct: 211229 cttcgcctcccgggtggcca 211248
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>ref|XM_465866.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ctcgccatggcgccgccgcc 64
           ||||||||||||||||||||
Sbjct: 176 ctcgccatggcgccgccgcc 195
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>ref|XM_465867.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1916

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ctcgccatggcgccgccgcc 64
           ||||||||||||||||||||
Sbjct: 293 ctcgccatggcgccgccgcc 312
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>gb|AY186678.1| Cancer magister clone Cma50 microsatellite sequence
          Length = 302

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 233 ctcctcctcctcgacctccc 252
           ||||||||||||||||||||
Sbjct: 265 ctcctcctcctcgacctccc 246
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>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032K12, complete sequence
          Length = 166936

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ctcgccatggcgccgccgcc 64
             ||||||||||||||||||||
Sbjct: 53220 ctcgccatggcgccgccgcc 53239
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>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence
          Length = 193192

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 233    ctcctcctcctcgacctccc 252
              ||||||||||||||||||||
Sbjct: 128327 ctcctcctcctcgacctccc 128308
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>ref|XM_323855.1| Neurospora crassa OR74A hypothetical protein (NCU04503.1) partial
            mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 231  atctcctcctcctcgacctcccac 254
            ||||||||||||||| ||||||||
Sbjct: 1400 atctcctcctcctcgtcctcccac 1377
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>ref|XM_427117.1| PREDICTED: Gallus gallus similar to putative microtubule associated
           protein; cNau (LOC429560), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 338 gggcgggggagacgcggctcccgg 361
           ||||||||| ||||||||||||||
Sbjct: 192 gggcgggggggacgcggctcccgg 215
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>ref|XM_951821.1| Neurospora crassa OR74A hypothetical protein (NCU04503.1) partial
            mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 231  atctcctcctcctcgacctcccac 254
            ||||||||||||||| ||||||||
Sbjct: 1400 atctcctcctcctcgtcctcccac 1377
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>ref|XM_877434.1| PREDICTED: Bos taurus hypothetical protein LOC614464 (LOC614464),
          mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 55 cgccgccgcccaccggcggcgcgg 78
          ||||||||||||||| ||||||||
Sbjct: 14 cgccgccgcccaccgccggcgcgg 37
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>ref|NM_001001806.2| Mus musculus zinc finger protein 36, C3H type-like 2 (Zfp36l2),
           mRNA
          Length = 3537

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 952 ggcgccgccgccccccgacggcgcgggc 925
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>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome
          Length = 235645

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     ctcgccatggcgccgccgcc 64
              ||||||||||||||||||||
Sbjct: 121059 ctcgccatggcgccgccgcc 121078
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>gb|AC132455.3| Mus musculus BAC clone RP23-129K10 from chromosome 17, complete sequence
          Length = 210538

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 53     ggcgccgccgcccaccggcggcgcgggc 80
              ||||||||||||| ||| ||||||||||
Sbjct: 174214 ggcgccgccgccccccgacggcgcgggc 174241
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>gb|BC006189.1| Mus musculus zinc finger protein 36, C3H type-like 2, mRNA (cDNA
           clone IMAGE:3603695)
          Length = 1095

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 801 ggcgccgccgccccccgacggcgcgggc 774
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>gb|BC028330.1| Mus musculus zinc finger protein 36, C3H type-like 2, mRNA (cDNA
           clone IMAGE:4923563)
          Length = 1206

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 910 ggcgccgccgccccccgacggcgcgggc 883
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>gb|AF424647.1| Phytophthora infestans clone MY-05-B-09 argininosuccinate lyase
           mRNA, complete cds
          Length = 1522

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 ccagccgctgcgcttctcgc 210
           ||||||||||||||||||||
Sbjct: 523 ccagccgctgcgcttctcgc 542
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>emb|BX013808.1|CNS08ITG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA20DA10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 708

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 230 catctcctcctcctcgacct 249
           ||||||||||||||||||||
Sbjct: 292 catctcctcctcctcgacct 311
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>emb|BX013807.1|CNS08ITF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA20DA10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 872

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 catctcctcctcctcgacct 249
           ||||||||||||||||||||
Sbjct: 621 catctcctcctcctcgacct 602
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>emb|X81375.1|TTRPL11 T.thermophilus gene for rpL11, rpL 1
          Length = 1123

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 62 gcccaccggcggcgcgggcgtggc 85
          ||||||||| ||||||||||||||
Sbjct: 72 gcccaccgggggcgcgggcgtggc 49
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>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
             complete sequence
          Length = 150551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    cgccgccgcccaccggcggc 74
             ||||||||||||||||||||
Sbjct: 92949 cgccgccgcccaccggcggc 92968
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>gb|AC087742.9| Homo sapiens chromosome 17, clone RP11-104O19, complete sequence
          Length = 168834

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 8      cccatcccaaatcctcccca 27
              ||||||||||||||||||||
Sbjct: 133251 cccatcccaaatcctcccca 133232
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>gb|AC087292.14| Homo sapiens chromosome 17, clone RP11-810M2, complete sequence
          Length = 195144

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      cccatcccaaatcctcccca 27
              ||||||||||||||||||||
Sbjct: 173671 cccatcccaaatcctcccca 173690
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>dbj|AK094320.1| Homo sapiens cDNA FLJ37001 fis, clone BRACE2008172
          Length = 2410

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   cccatcccaaatcctcccca 27
           ||||||||||||||||||||
Sbjct: 160 cccatcccaaatcctcccca 179
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 48      gccatggcgccgccgcccaccggc 71
               |||||||||||| |||||||||||
Sbjct: 2279692 gccatggcgccgacgcccaccggc 2279669
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>dbj|AK142565.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630039C13 product:Warning: possibly
           chimeric clone, full insert sequence
          Length = 2625

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 758 ggcgccgccgccccccgacggcgcgggc 731
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>dbj|AK160955.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:4022412H10 product:zinc finger protein
           36, C3H type-like 2, full insert sequence
          Length = 3137

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 951 ggcgccgccgccccccgacggcgcgggc 924
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>ref|XM_689818.1| PREDICTED: Danio rerio similar to CG8176-PB, isoform B (LOC566542),
            mRNA
          Length = 2967

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 233  ctcctcctcctcgacctcccacat 256
            |||||||||||| |||||||||||
Sbjct: 1682 ctcctcctcctccacctcccacat 1705
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>dbj|AK159513.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420022I03 product:Butyrate response
           factor 2 (TIS11D protein) (EGF-response factor 2)
           (ERF-2) homolog [Homo sapiens], full insert sequence
          Length = 3532

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 953 ggcgccgccgccccccgacggcgcgggc 926
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>emb|CR524094.1| Gallus gallus finished cDNA, clone ChEST257g6
          Length = 806

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   cccatcccaaatcctcccca 27
           ||||||||||||||||||||
Sbjct: 236 cccatcccaaatcctcccca 255
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>dbj|AK170763.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630118N10
           product:zinc finger protein 36, C3H type-like 2, full
           insert sequence
          Length = 3531

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 953 ggcgccgccgccccccgacggcgcgggc 926
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>gb|BC038863.1| Mus musculus zinc finger protein 36, C3H type-like 2, mRNA (cDNA
           clone IMAGE:5142624), partial cds
          Length = 961

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 674 ggcgccgccgccccccgacggcgcgggc 647
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 55       cgccgccgcccaccggcggc 74
                ||||||||||||||||||||
Sbjct: 30995576 cgccgccgcccaccggcggc 30995595
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      ctcgccatggcgccgccgcc 64
               ||||||||||||||||||||
Sbjct: 6927962 ctcgccatggcgccgccgcc 6927981
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 45       ctcgccatggcgccgccgcc 64
                ||||||||||||||||||||
Sbjct: 17980956 ctcgccatggcgccgccgcc 17980975
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 223      ccaagagcatctcctcctcc 242
                ||||||||||||||||||||
Sbjct: 35426878 ccaagagcatctcctcctcc 35426897
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>gb|AF205223.1|AF205223 Mus musculus TIS11D insertion variant (Brf2) mRNA, partial cds
          Length = 673

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 180 ggcgccgccgccccccgacggcgcgggc 153
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>gb|AF205222.1|AF205222 Mus musculus TIS11D deletion variant (Brf2) mRNA, partial cds
          Length = 484

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 180 ggcgccgccgccccccgacggcgcgggc 153
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>gb|AC093838.3| Homo sapiens BAC clone RP11-433A19 from 2, complete sequence
          Length = 178029

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   gcccacgccccctgggggcg 342
             ||||||||||||||||||||
Sbjct: 70499 gcccacgccccctgggggcg 70480
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>ref|NM_204919.1| Gallus gallus putative microtubule associated protein (NAU), mRNA
          Length = 5069

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 338 gggcgggggagacgcggctcccgg 361
           ||||||||| ||||||||||||||
Sbjct: 290 gggcgggggggacgcggctcccgg 313
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ccaagagcatctcctcctcc 242
             ||||||||||||||||||||
Sbjct: 50827 ccaagagcatctcctcctcc 50846
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 62     gcccaccggcggcgcgggcgtggc 85
              ||||||||| ||||||||||||||
Sbjct: 237890 gcccaccgggggcgcgggcgtggc 237913
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>emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, complete sequence
          Length = 177531

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   gtccagccgctgcgcttctc 208
             ||||||||||||||||||||
Sbjct: 67125 gtccagccgctgcgcttctc 67106
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>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6,
             complete sequence
          Length = 143341

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 233   ctcctcctcctcgacctcccacat 256
             |||||||||||| |||||||||||
Sbjct: 36211 ctcctcctcctccacctcccacat 36234
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>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F04
          Length = 139563

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ctcgccatggcgccgccgcc 64
             ||||||||||||||||||||
Sbjct: 42550 ctcgccatggcgccgccgcc 42569
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>dbj|AK120677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162E22, full
           insert sequence
          Length = 1917

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ctcgccatggcgccgccgcc 64
           ||||||||||||||||||||
Sbjct: 293 ctcgccatggcgccgccgcc 312
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>ref|XM_562819.1| Anopheles gambiae str. PEST ENSANGP00000026097
           (ENSANGG00000022829), partial mRNA
          Length = 543

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 catctcctcctcctcgacct 249
           ||||||||||||||||||||
Sbjct: 243 catctcctcctcctcgacct 224
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>ref|XM_312750.2| Anopheles gambiae str. PEST ENSANGP00000020330
           (ENSANGG00000017841), partial mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 catctcctcctcctcgacct 249
           ||||||||||||||||||||
Sbjct: 417 catctcctcctcctcgacct 398
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>ref|XM_312672.2| Anopheles gambiae str. PEST ENSANGP00000023029 (ENSANGG00000020647),
            partial mRNA
          Length = 2103

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ctcctcctcctcgacctccc 252
            ||||||||||||||||||||
Sbjct: 1722 ctcctcctcctcgacctccc 1703
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>dbj|AB090821.1| Anopheles gambiae retrotransposon R7Ag2 DNA, complete sequence
          Length = 6590

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ctcctcctcctcgacctccc 252
            ||||||||||||||||||||
Sbjct: 5909 ctcctcctcctcgacctccc 5890
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>gb|AF038560.1|AF038560 Gallus gallus putative microtubule associated protein (Nau) mRNA,
           complete cds
          Length = 5069

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 338 gggcgggggagacgcggctcccgg 361
           ||||||||| ||||||||||||||
Sbjct: 290 gggcgggggggacgcggctcccgg 313
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 45      ctcgccatggcgccgccgcc 64
               ||||||||||||||||||||
Sbjct: 6994429 ctcgccatggcgccgccgcc 6994448
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 62      gcccaccggcggcgcgggcgtggc 85
               ||||||||| ||||||||||||||
Sbjct: 1652190 gcccaccgggggcgcgggcgtggc 1652167
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>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence
          Length = 209249

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    ctcctcctcctcgacctccc 252
              ||||||||||||||||||||
Sbjct: 201958 ctcctcctcctcgacctccc 201977
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>gb|M58564.1|MUSTIS11D Mouse TIS11 primary response gene, complete cds
          Length = 1141

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 53  ggcgccgccgcccaccggcggcgcgggc 80
           ||||||||||||| ||| ||||||||||
Sbjct: 629 ggcgccgccgccccccgacggcgcgggc 602


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,726,308
Number of Sequences: 3902068
Number of extensions: 3726308
Number of successful extensions: 86270
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83975
Number of HSP's gapped (non-prelim): 2292
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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