>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
           cds
          Length = 1508

 Score =  172 bits (87), Expect = 1e-40
 Identities = 96/99 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccggggtgcaccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacac 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  tccggggtgtaccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacac 129

                                                  
Query: 61  gtacatctcggtgatctacgccttccacgcaacggcgcc 99
           ||||||||||||||||||||||||||||||  |||||||
Sbjct: 130 gtacatctcggtgatctacgccttccacgcgccggcgcc 168

>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 10  caccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatctc 69
           ||||| |||||||||||||||||  ||| |||||||||| ||||| ||||||||||||||
Sbjct: 69  caccggcgacgtcgtcccgctcaaagtgttcgacaaggcgaactttgacacgtacatctc 128

                         
Query: 70  ggtgatctacgcct 83
           |||||| |||||||
Sbjct: 129 ggtgatatacgcct 142

>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                         
Query: 10    caccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatctc 69
             ||||| |||||||||||||||||  ||| |||||||||| ||||| ||||||||||||||
Sbjct: 10323 caccggcgacgtcgtcccgctcaaagtgttcgacaaggcgaactttgacacgtacatctc 10382

                           
Query: 70    ggtgatctacgcct 83
             |||||| |||||||
Sbjct: 10383 ggtgatatacgcct 10396



 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 9     gcaccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatct 68
             ||||||||||||| || |||||||  ||| |||||| ||| ||||| ||||||||| |||
Sbjct: 15169 gcaccgccgacgttgtgccgctcagtgtgttcgacagggcgaactttgacacgtacgtct 15110

                               
Query: 69    cggtgatctacgccttcc 86
             | || || ||||||||||
Sbjct: 15109 ccgtcatatacgccttcc 15092

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                            
Query: 10       caccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatctc 69
                ||||| |||||||||||||||||  ||| |||||||||| ||||| ||||||||||||||
Sbjct: 33959426 caccggcgacgtcgtcccgctcaaagtgttcgacaaggcgaactttgacacgtacatctc 33959485

                              
Query: 70       ggtgatctacgcct 83
                |||||| |||||||
Sbjct: 33959486 ggtgatatacgcct 33959499



 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                            
Query: 9        gcaccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatct 68
                ||||||||||||| || |||||||  ||| |||||| ||| ||||| ||||||||| |||
Sbjct: 33964272 gcaccgccgacgttgtgccgctcagtgtgttcgacagggcgaactttgacacgtacgtct 33964213

                                  
Query: 69       cggtgatctacgccttcc 86
                | || || ||||||||||
Sbjct: 33964212 ccgtcatatacgccttcc 33964195

>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
           insert sequence
          Length = 1640

 Score = 91.7 bits (46), Expect = 3e-16
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 10  caccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatctc 69
           ||||| |||||||||||||||||  ||| |||||||||| ||||| ||||||||||||||
Sbjct: 175 caccggcgacgtcgtcccgctcaaagtgttcgacaaggcgaactttgacacgtacatctc 234

                         
Query: 70  ggtgatctacgcct 83
           |||||| |||||||
Sbjct: 235 ggtgatatacgcct 248

>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score = 60.0 bits (30), Expect = 1e-06
 Identities = 66/78 (84%)
 Strand = Plus / Plus

                                                                       
Query: 9   gcaccgccgacgtcgtcccgctcaccgtgctcgacaaggccaacttcgacacgtacatct 68
           ||||||||||||| || |||||||  ||| |||||| ||| ||||| ||||||||| |||
Sbjct: 68  gcaccgccgacgttgtgccgctcagtgtgttcgacagggcgaactttgacacgtacgtct 127

                             
Query: 69  cggtgatctacgccttcc 86
           | || || ||||||||||
Sbjct: 128 ccgtcatatacgccttcc 145

>dbj|D37772.1|MEAL1 Measles virus mRNA for RNA dependent RNA poymerase, complete cds
          Length = 6597

 Score = 44.1 bits (22), Expect = 0.071
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 35   gtgctcgacaaggccaacttcg 56
            ||||||||||||||||||||||
Sbjct: 5510 gtgctcgacaaggccaacttcg 5489

>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 31      caccgtgctcgacaaggccaacttcgaca 59
               ||||||| |||||||||||||| ||||||
Sbjct: 1386943 caccgtgatcgacaaggccaacctcgaca 1386915

>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
           quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 31  caccgtgctcgacaaggcc 49
           |||||||||||||||||||
Sbjct: 305 caccgtgctcgacaaggcc 323

>gb|AY532999.1| Melanolecia transitoria voucher J. Poelt & M. Grube 93-432 (GZU)
           large subunit ribosomal RNA gene, partial sequence
          Length = 1286

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 7   gtgcaccgccgacgtcgtc 25
           |||||||||||||||||||
Sbjct: 407 gtgcaccgccgacgtcgtc 389

>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 13     cgccgacgtcgtcccgctc 31
              |||||||||||||||||||
Sbjct: 105609 cgccgacgtcgtcccgctc 105591

>gb|AY601675.1| Zantedeschia hybrid cultivar Skp1/Ask1-like protein mRNA, complete
           cds
          Length = 807

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 8   tgcaccgccgacgtcgtcccgct 30
           ||||||||||||| |||||||||
Sbjct: 239 tgcaccgccgacggcgtcccgct 261

>gb|AF222421.1| Simicratea welwitschii 26S ribosomal RNA gene, partial sequence
          Length = 921

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   tccggggtgcaccgccgac 19
           |||||||||||||||||||
Sbjct: 717 tccggggtgcaccgccgac 735

>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ
             gene, spiK gene, spiL gene and spiZ gene
          Length = 48000

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    cgccgacgtcgtcccgctc 31
             |||||||||||||||||||
Sbjct: 10637 cgccgacgtcgtcccgctc 10655

>gb|AE005803.1| Caulobacter crescentus CB15 section 129 of 359 of the complete genome
          Length = 10483

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 31   caccgtgctcgacaaggcc 49
            |||||||||||||||||||
Sbjct: 9938 caccgtgctcgacaaggcc 9956

>gb|AE004742.1| Pseudomonas aeruginosa PAO1, section 303 of 529 of the complete
            genome
          Length = 12902

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 21   tcgtcccgctcaccgtgctcgac 43
            |||||| ||||||||||||||||
Sbjct: 7243 tcgtccagctcaccgtgctcgac 7265

>gb|AY943953.1| Streptomyces sp. FQ1 plasmid pFP1, complete sequence
          Length = 39360

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    ccgccgacgtcgtcccgct 30
             |||||||||||||||||||
Sbjct: 22398 ccgccgacgtcgtcccgct 22416

>gb|AF029673.2|AF029673 Pseudomonas aeruginosa HexR (hexR), glucose-6-phosphate
           1-dehydrogenase (zwf), 6-phosphogluconolactonase (pgl),
           and 2-keto-3-deoxy-6-phosphogluconate aldolase (eda)
           genes, complete cds
          Length = 4115

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 21  tcgtcccgctcaccgtgctcgac 43
           |||||| ||||||||||||||||
Sbjct: 209 tcgtccagctcaccgtgctcgac 187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 347,015
Number of Sequences: 3902068
Number of extensions: 347015
Number of successful extensions: 25054
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24976
Number of HSP's gapped (non-prelim): 78
length of query: 99
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 78
effective length of database: 17,151,101,840
effective search space: 1337785943520
effective search space used: 1337785943520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)