ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart61h05 |
|---|---|
| Clone Library Name | barley_pub |
>FDH_HORVU (Q9ZRI8) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 377 Score = 261 bits (666), Expect = 1e-69 Identities = 128/134 (95%), Positives = 131/134 (97%) Frame = +3 Query: 96 MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADENPNFVGCVEGALGIRD 275 MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYAD+NPNFVGCVEGALGIRD Sbjct: 1 MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRD 60 Query: 276 WLESKGHHYIVTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAG 455 WLESKGHHYIVTDD+EG NSELEKHIEDMHVLITTPFHPAYVTAE+IKKAK ELLLTAG Sbjct: 61 WLESKGHHYIVTDDKEGFNSELEKHIEDMHVLITTPFHPAYVTAEKIKKAKTPELLLTAG 120 Query: 456 IGSDHIDLPAAAAA 497 IGSDHIDLPAAAAA Sbjct: 121 IGSDHIDLPAAAAA 134
>FDH1_ORYSA (Q9SXP2) Formate dehydrogenase 1, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) Length = 376 Score = 249 bits (636), Expect = 3e-66 Identities = 121/132 (91%), Positives = 128/132 (96%) Frame = +3 Query: 102 AMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADENPNFVGCVEGALGIRDWL 281 AMWRAAA L+ RA+GSRAAHTSAGSKKIVGVFY+ GEYAD+NPNFVGCVEGALGIR+WL Sbjct: 2 AMWRAAAGHLLGRALGSRAAHTSAGSKKIVGVFYKGGEYADKNPNFVGCVEGALGIREWL 61 Query: 282 ESKGHHYIVTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIG 461 ESKGHHYIVTDD+EGLNSELEKHIEDMHVLITTPFHPAYV+AERIKKAKNLELLLTAGIG Sbjct: 62 ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLTAGIG 121 Query: 462 SDHIDLPAAAAA 497 SDHIDLPAAAAA Sbjct: 122 SDHIDLPAAAAA 133
>FDH2_ORYSA (Q67U69) Formate dehydrogenase 2, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) Length = 378 Score = 226 bits (576), Expect = 3e-59 Identities = 111/134 (82%), Positives = 121/134 (90%), Gaps = 2/134 (1%) Frame = +3 Query: 102 AMWRA--AARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADENPNFVGCVEGALGIRD 275 AMWRA AA QL+ RA+ S AA TSAGSKK+VGVFY+ GEYAD+NPNFVGCV+ ALGIR Sbjct: 2 AMWRAPSAAGQLLGRALASTAAQTSAGSKKVVGVFYKGGEYADKNPNFVGCVDSALGIRG 61 Query: 276 WLESKGHHYIVTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAG 455 WLESKGH YIVTDD+EG+N ELEKHIED HVLITTPFHPAY+TAERIKKAKNLELLLTAG Sbjct: 62 WLESKGHRYIVTDDKEGINCELEKHIEDAHVLITTPFHPAYITAERIKKAKNLELLLTAG 121 Query: 456 IGSDHIDLPAAAAA 497 +GSDHIDLPAAAAA Sbjct: 122 VGSDHIDLPAAAAA 135
>FDH_ARATH (Q9S7E4) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 384 Score = 188 bits (477), Expect = 8e-48 Identities = 91/111 (81%), Positives = 101/111 (90%) Frame = +3 Query: 165 TSAGSKKIVGVFYQAGEYADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELE 344 +S SKKIVGVFY+A EYA +NPNF+GCVE ALGIRDWLES+GH YIVTDD+EG + ELE Sbjct: 31 SSGDSKKIVGVFYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELE 90 Query: 345 KHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPAAAAA 497 KHI D+HVLI+TPFHPAYVTAERIKKAKNL+LLLTAGIGSDHIDL AAAAA Sbjct: 91 KHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAA 141
>FDH_SOLTU (Q07511) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 381 Score = 187 bits (475), Expect = 1e-47 Identities = 94/138 (68%), Positives = 111/138 (80%), Gaps = 2/138 (1%) Frame = +3 Query: 90 VSMAAMWRAAARQLVDRA--VGSRAAHTSAGSKKIVGVFYQAGEYADENPNFVGCVEGAL 263 ++M+ + AAR + + V +R S G KKIVGVFY+A EYA+ NPNF+GC E AL Sbjct: 1 MAMSRVASTAARAITSPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENAL 60 Query: 264 GIRDWLESKGHHYIVTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELL 443 GIR+WLESKGH YIVT D+EG + ELEKHI D+HVLI+TPFHPAYVTAERIKKAKNL+LL Sbjct: 61 GIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLL 120 Query: 444 LTAGIGSDHIDLPAAAAA 497 LTAGIGSDH+DL AAAAA Sbjct: 121 LTAGIGSDHVDLKAAAAA 138
>FDH_PICAN (P33677) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 361 Score = 132 bits (331), Expect = 7e-31 Identities = 61/99 (61%), Positives = 75/99 (75%) Frame = +3 Query: 183 KIVGVFYQAGEYADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIEDM 362 K+V V Y AG++A + GC E ALGIRDWLE +GH +VT D+EG NS LEK+I D Sbjct: 1 KVVLVLYDAGKHAQDEERLYGCTENALGIRDWLEKQGHDVVVTSDKEGQNSVLEKNISDA 60 Query: 363 HVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDL 479 V+I+TPFHPAY+T ERI KAK L+LL+ AG+GSDHIDL Sbjct: 61 DVIISTPFHPAYITKERIDKAKKLKLLVVAGVGSDHIDL 99
>FDH_NEUCR (Q07103) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 375 Score = 120 bits (300), Expect = 3e-27 Identities = 51/102 (50%), Positives = 74/102 (72%) Frame = +3 Query: 183 KIVGVFYQAGEYADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIEDM 362 K++ V Y G++ +E P +G ++ LG+R WLE +GH + T D++G NS +K +ED Sbjct: 3 KVLAVLYDGGKHGEEVPELLGTIQNELGLRKWLEDQGHTLVTTCDKDGENSTFDKELEDA 62 Query: 363 HVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPAA 488 ++ITTPFHP Y+TAER+ +AK L+L +TAGIGSDH+DL AA Sbjct: 63 EIIITTPFHPGYLTAERLARAKKLKLAVTAGIGSDHVDLNAA 104
>FDH_EMENI (Q03134) Probable formate dehydrogenase (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase) (FDH) Length = 377 Score = 119 bits (298), Expect = 5e-27 Identities = 53/98 (54%), Positives = 69/98 (70%) Frame = +3 Query: 195 VFYQAGEYADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIEDMHVLI 374 V Y G +A + P +G E LGIR W+E +GH + T D++G NS +K + D V+I Sbjct: 2 VLYDGGSHAKDQPGLLGTTENELGIRKWIEEQGHTLVTTSDKDGENSTFDKELVDAEVII 61 Query: 375 TTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPAA 488 TTPFHP Y+TAER+ KAKNL+L +TAGIGSDH+DL AA Sbjct: 62 TTPFHPGYLTAERLAKAKNLKLAVTAGIGSDHVDLDAA 99
>FDH2_YEAST (Q08987) Formate dehydrogenase 2 (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase 2) Length = 376 Score = 100 bits (249), Expect = 2e-21 Identities = 44/103 (42%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Frame = +3 Query: 183 KIVGVFYQAGEYADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGL-NSELEKHIED 359 K++ V Y+ G++A+E +GC+E LGIR+++E +G+ + T D++ S +++ ++D Sbjct: 5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKD 64 Query: 360 MHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPAA 488 ++ITTPF PAY++ RI +A NL+L +TAG+GSDH+DL AA Sbjct: 65 AEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAA 107
>FDH1_YEAST (Q08911) Formate dehydrogenase 1 (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase 1) Length = 376 Score = 100 bits (249), Expect = 2e-21 Identities = 44/103 (42%), Positives = 74/103 (71%), Gaps = 1/103 (0%) Frame = +3 Query: 183 KIVGVFYQAGEYADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGL-NSELEKHIED 359 K++ V Y+ G++A+E +GC+E LGIR+++E +G+ + T D++ S +++ ++D Sbjct: 5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKD 64 Query: 360 MHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPAA 488 ++ITTPF PAY++ RI +A NL+L +TAG+GSDH+DL AA Sbjct: 65 AEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAA 107
>FDH_PSESR (P33160) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 400 Score = 98.2 bits (243), Expect = 1e-20 Identities = 47/83 (56%), Positives = 62/83 (74%) Frame = +3 Query: 240 VGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIK 419 +G V G LG+R +LES GH +VT D++G +S E+ + D V+I+ PF PAY+T ERI Sbjct: 50 LGSVSGELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIA 109 Query: 420 KAKNLELLLTAGIGSDHIDLPAA 488 KAKNL+L LTAGIGSDH+DL +A Sbjct: 110 KAKNLKLALTAGIGSDHVDLQSA 132
>SERA_ARCFU (O29445) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 527 Score = 33.1 bits (74), Expect = 0.43 Identities = 16/30 (53%), Positives = 23/30 (76%) Frame = +3 Query: 399 VTAERIKKAKNLELLLTAGIGSDHIDLPAA 488 V AE I+ AKNL+++ AG+G D+ID+ AA Sbjct: 53 VDAEVIQAAKNLKIIGRAGVGVDNIDINAA 82
>AKSF_METJA (Q58991) Threo-isocitrate dehydrogenase [NAD] (EC 1.1.1.-)| Length = 347 Score = 32.0 bits (71), Expect = 0.95 Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 11/122 (9%) Frame = +3 Query: 135 DRAVGSRAAHTSAGSKKIVGVFYQAGEYA-DENPNFVGCVEGA--LGIRDWL------ES 287 D A+ R T GS++I+ + EYA N V C+ A L I D L E Sbjct: 144 DTAIAERVI-TRKGSERIIRFAF---EYAIKNNRKKVSCIHKANVLRITDGLFLEVFNEI 199 Query: 288 KGHHYIVTDDE--EGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIG 461 K H+ I DD + L KH E V++TT ++ E L L +A IG Sbjct: 200 KKHYNIEADDYLVDSTAMNLIKHPEKFDVIVTTNMFGDILSDEASALIGGLGLAPSANIG 259 Query: 462 SD 467 D Sbjct: 260 DD 261
>E2AK3_DROME (Q9NIV1) Eukaryotic translation initiation factor 2-alpha kinase| precursor (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (PERK) (PEK) (DmPEK) Length = 1162 Score = 31.2 bits (69), Expect = 1.6 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Frame = +3 Query: 192 GVFYQAGE---YADENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIEDM 362 G Q GE Y DEN F + L +++ G ++ T D G ++ Sbjct: 436 GAVAQGGELVPYDDEN--FAVAAQSVLNASEFVNGNGFYFYTTGDLNGPQECSTQNNPTD 493 Query: 363 HVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLP 482 IT P P T+E + N + G D ID P Sbjct: 494 LPAITAPTSPTNATSEGTEATGNHSVNDDLGFSLDDIDAP 533
>SERA_RAT (O08651) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +3 Query: 306 VTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPA 485 V + + EL ++D LI VTA+ I A+ L+++ AG G D++DL A Sbjct: 29 VVEKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEA 86 Query: 486 A 488 A Sbjct: 87 A 87
>SERA_PONPY (Q5R7M2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +3 Query: 306 VTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPA 485 V + + EL ++D LI VTA+ I A+ L+++ AG G D++DL A Sbjct: 29 VVEKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEA 86 Query: 486 A 488 A Sbjct: 87 A 87
>SERA_MOUSE (Q61753) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| (A10) Length = 532 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +3 Query: 306 VTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPA 485 V + + EL ++D LI VTA+ I A+ L+++ AG G D++DL A Sbjct: 29 VVEKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEA 86 Query: 486 A 488 A Sbjct: 87 A 87
>SERA_MACFA (Q60HD7) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +3 Query: 306 VTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPA 485 V + + EL ++D LI VTA+ I A+ L+++ AG G D++DL A Sbjct: 29 VVEKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEA 86 Query: 486 A 488 A Sbjct: 87 A 87
>SERA_HUMAN (O43175) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 29.6 bits (65), Expect = 4.7 Identities = 20/61 (32%), Positives = 31/61 (50%) Frame = +3 Query: 306 VTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPA 485 V + + EL ++D LI VTA+ I A+ L+++ AG G D++DL A Sbjct: 29 VVEKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEA 86 Query: 486 A 488 A Sbjct: 87 A 87
>ARCB_HAEIN (P44578) Aerobic respiration control sensor protein arcB homolog| (EC 2.7.13.3) Length = 325 Score = 29.6 bits (65), Expect = 4.7 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +3 Query: 294 HHYIVTDDEEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGS 464 +H+IV D G++ E +KHI +M+ + + + + +KNL L+ G S Sbjct: 269 YHFIVKDTGMGISPEEQKHIFEMYYQVKESRQQSAGSGIGLAISKNLAQLMGRGFNS 325
>MIA40_CANGA (Q6FW26) Intermembrane space import and assembly protein 40,| mitochondrial precursor (Mitochondrial import inner membrane translocase TIM40) Length = 404 Score = 29.6 bits (65), Expect = 4.7 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = +3 Query: 216 YADENPNFVGCVEGALGIRDWLESKGHHYI--VTDDEEGLNSELEKHI---EDMHVLITT 380 Y++ P + CVE ++D HY + D + N + EK++ +D V T Sbjct: 315 YSEAEPKGIDCVEKFQHMQDCFRRYPEHYAEQLADPADDENVDHEKNLSEGKDTGVDSTP 374 Query: 381 PFHPAYVTAERIKK 422 P AY+ E+ KK Sbjct: 375 PKDEAYLKTEKEKK 388
>Y169_METJA (Q57633) Hypothetical ATP-binding protein MJ0169| Length = 263 Score = 29.3 bits (64), Expect = 6.2 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +3 Query: 300 YIVTDDEEGLNSELEKH--IEDMHVLITTPFHPAYVTAERIKKAKNL 434 Y++ D GLN E+ H I D +L+ TP + + A R+K++ + Sbjct: 114 YVIIDAPAGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEM 160
>NCOA3_HUMAN (Q9Y6Q9) Nuclear receptor coactivator 3 (EC 2.3.1.48) (NCoA-3)| (Thyroid hormone receptor activator molecule 1) (TRAM-1) (ACTR) (Receptor-associated coactivator 3) (RAC-3) (Amplified in breast cancer-1 protein) (AIB-1) (Steroid receptor coacti Length = 1424 Score = 29.3 bits (64), Expect = 6.2 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%) Frame = +3 Query: 249 VEGALGIRDWLESKGHHYIV-----TDDEEG----LNSELEKHIEDMHVLITTPFHPAYV 401 VEGA R LESKGH ++ + D+ G NS L+ ++ V +T+P + Sbjct: 603 VEGAENQRGPLESKGHKKLLQLLTCSSDDRGHSSLTNSPLDSSCKESSVSVTSPSGVSSS 662 Query: 402 TAERIKKAKNL 434 T+ + N+ Sbjct: 663 TSGGVSSTSNM 673
>SERA_SYNY3 (P73821) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 554 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = +3 Query: 399 VTAERIKKAKNLELLLTAGIGSDHIDLPAA 488 VT + I+ L+++ AG+G D+ID+PAA Sbjct: 81 VTEKIIQAGSQLKIIGRAGVGVDNIDVPAA 110
>SYI_THET8 (P56690) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1043 Score = 28.9 bits (63), Expect = 8.1 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 262 RAPSTQPTKLGFSSAYSPAW*NTPTIFLLPADVCAALDP 146 R P +P KLG A W TP + LP +V AA+ P Sbjct: 208 RFPLKEPKKLGLEKASLLIWTTTP--WTLPGNVAAAVHP 244
>SYI_THET2 (Q72JR6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1043 Score = 28.9 bits (63), Expect = 8.1 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 262 RAPSTQPTKLGFSSAYSPAW*NTPTIFLLPADVCAALDP 146 R P +P KLG A W TP + LP +V AA+ P Sbjct: 208 RFPLKEPKKLGLEKASLLIWTTTP--WTLPGNVAAAVHP 244
>YGFB_PSEAE (Q9HTW5) UPF0149 protein PA5225| Length = 184 Score = 28.9 bits (63), Expect = 8.1 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 7/94 (7%) Frame = +3 Query: 102 AMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYA-------DENPNFVGCVEGA 260 A W+ AA +L+ A G R +G +V + AGE A DE P + Sbjct: 44 AAWQHAAAELLGGAPGERLKAALSGLLGMVRQDFSAGEVAVVMLLPDDETP----LAQRT 99 Query: 261 LGIRDWLESKGHHYIVTDDEEGLNSELEKHIEDM 362 + W + + +T E L E E+ ++DM Sbjct: 100 EALGQWCQGFLAGFGLTAREGSLTGEAEEVLQDM 133
>NRFA_SALTY (Q8ZKF5) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming| cytochrome c nitrite reductase) (Cytochrome c nitrite reductase) Length = 478 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 225 ENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIED 359 E+P V G RD+ + +GH Y VTD E L + K ED Sbjct: 71 EDPRLVILWAGYPFSRDYNKPRGHAYAVTDVRETLRTGAPKTAED 115
>NRFA_SALTI (Q8Z1Q9) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming| cytochrome c nitrite reductase) (Cytochrome c nitrite reductase) Length = 478 Score = 28.9 bits (63), Expect = 8.1 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 225 ENPNFVGCVEGALGIRDWLESKGHHYIVTDDEEGLNSELEKHIED 359 E+P V G RD+ + +GH Y VTD E L + K ED Sbjct: 71 EDPRLVILWAGYPFSRDYNKPRGHAYAVTDVRETLRTGAPKTAED 115 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,380,680 Number of Sequences: 219361 Number of extensions: 1211421 Number of successful extensions: 4237 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4230 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
