ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, co... 848 0.0
2gb|AF479036.1| Triticum aestivum formate dehydrogenase mRNA, par... 749 0.0
3dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
4dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 452 e-124
5dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehy... 452 e-124
6gb|BT016309.1| Zea mays clone Contig142 mRNA sequence 402 e-109
7gb|AY111955.1| Zea mays CL15209_1 mRNA sequence 394 e-106
8dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
10dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
11dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic D... 210 3e-51
12emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrog... 92 2e-15
13ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE... 58 3e-05
14emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC... 58 3e-05
15gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, comp... 58 3e-05
16gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent format... 58 3e-05
17gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent format... 58 3e-05
18gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, comp... 58 3e-05
19gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, comp... 58 3e-05
20dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydr... 58 3e-05
21gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenas... 58 3e-05
22emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
23gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete se... 50 0.007
24emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydro... 48 0.028
25emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydro... 48 0.028
26gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, part... 46 0.11
27ref|XM_466474.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
28ref|XM_466475.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
29gb|AC158603.6| Mus musculus 10 BAC RP24-466C12 (Roswell Park Can... 44 0.43
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
31dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
32dbj|AK100917.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
33dbj|AK068984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
34emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 44 0.43
35gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 1.7
36gb|AC158353.3| Mus musculus chromosome 8, clone RP24-363C18, com... 42 1.7
37emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.7
38emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 42 1.7
39gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, co... 42 1.7
40gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, r... 42 1.7
41ref|XM_216791.3| PREDICTED: Rattus norvegicus similar to [Mouse ... 42 1.7
42gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, r... 42 1.7
43gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14... 42 1.7
44gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 6.8
45ref|XM_516862.1| PREDICTED: Pan troglodytes similar to golgi pho... 40 6.8
46gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, compl... 40 6.8
47gb|AY779562.1| HIV-1 isolate CANC6FULL from Canada, complete genome 40 6.8
48gb|AY779560.1| HIV-1 isolate CANC3FULL from Canada, complete genome 40 6.8
49gb|AY779557.1| HIV-1 isolate CANC10FULL from Canada, complete ge... 40 6.8
50gb|DQ097749.1| HIV-1 isolate V3 from USA nonfunctional gag prote... 40 6.8
51gb|U64851.1| Caenorhabditis elegans cosmid F28A12, complete sequ... 40 6.8
52ref|XM_359978.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.8
53gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromoso... 40 6.8
54ref|XM_425348.1| PREDICTED: Gallus gallus similar to hypothetica... 40 6.8
55gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome... 40 6.8
56gb|AY360912.1| HIV-1 isolate gag10 from United Kingdom gag prote... 40 6.8
57ref|NM_009396.1| Mus musculus tumor necrosis factor, alpha-induc... 40 6.8
58gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome... 40 6.8
59gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome ... 40 6.8
60ref|XM_994259.1| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.8
61ref|XM_619357.3| PREDICTED: Mus musculus myeloid/lymphoid or mix... 40 6.8
62ref|XM_001004343.1| PREDICTED: Mus musculus pleckstrin homology ... 40 6.8
63gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, com... 40 6.8
64gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosom... 40 6.8
65gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, comple... 40 6.8
66gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, com... 40 6.8
67gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 o... 40 6.8
68ref|XM_777631.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.8
69gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome ... 40 6.8
70gb|AY206650.1| HIV-1 from USA patient R1 gag protein (gag) gene,... 40 6.8
71emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 6.8
72gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, co... 40 6.8
73emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chro... 40 6.8
74emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in... 40 6.8
75gb|DQ122865.1| Chlamydomonas incerta 14-3-3-like protein-related... 40 6.8
76gb|AE009847.1|AE009847 Pyrobaculum aerophilum strain IM2 section... 40 6.8
77dbj|AK154405.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.8
78dbj|AK154155.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.8
79gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome 40 6.8
80dbj|AK170719.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.8
81dbj|AK172653.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 6.8
82emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene 40 6.8
83dbj|AK032797.1| Mus musculus 12 days embryo male wolffian duct i... 40 6.8
84gb|BC008165.1| Mus musculus tumor necrosis factor, alpha-induced... 40 6.8
85gb|AF084762.1|AF084762 HIV-1 pair E, infant, clone 11 p17 matrix... 40 6.8
86gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.8
87gb|AC159480.5| Mus musculus 6 BAC RP24-470K4 (Roswell Park Cance... 40 6.8
88gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, r... 40 6.8
89gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, r... 40 6.8
90dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
91ref|XM_392144.2| PREDICTED: Apis mellifera similar to CG32296-PA... 40 6.8
92gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.8
93gb|AF073389.1|AF073389 HIV-1 isolate 13010 from USA clone 12A ga... 40 6.8
94gb|AF073386.1|AF073386 HIV-1 isolate 13010 from USA clone 7A gag... 40 6.8
95gb|AF073385.1|AF073385 HIV-1 isolate 13010 from USA clone 6A gag... 40 6.8
96gb|AF073382.1|AF073382 HIV-1 isolate 13010 from USA clone 2A gag... 40 6.8
97gb|AC069211.15| Homo sapiens 3 BAC RP11-509E17 (Roswell Park Can... 40 6.8
98ref|XM_343326.2| PREDICTED: Rattus norvegicus myeloid/lymphoid o... 40 6.8
99gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome 40 6.8
100dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, compl... 40 6.8
101dbj|AK201033.1| Mus musculus cDNA, clone:Y1G0136M06, strand:minu... 40 6.8
102dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.8
103emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding forma... 40 6.8
104dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
105gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, r... 40 6.8
106gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 ... 40 6.8
107gb|AF014195.1|AF014195 HIV-1 Patient 1498 from Glasgow MA-p17 (g... 40 6.8
108gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome ... 40 6.8
109gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complet... 40 6.8
110emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete ch... 40 6.8
111emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in... 40 6.8
112emb|Z99993.1|STZ99993 Solanum tuberosum fdh2 gene encoding forma... 40 6.8
113gb|L24118.1|MUSB94A Mouse primary response gene B94 mRNA, 3'end 40 6.8
114emb|AL669966.10| Mouse DNA sequence from clone RP23-174K9 on chr... 40 6.8

>dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, complete cds
          Length = 1380

 Score =  848 bits (428), Expect = 0.0
 Identities = 461/472 (97%)
 Strand = Plus / Plus

                                                                       
Query: 26  gcctcgtccgccgttccccgtgaggtgattggcagattgcttcttcctccgccgggatcc 85
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcctcgcccgccattccccgtgaggtgattggcagattgcttcttcctccgccgggatcc 60

                                                                       
Query: 86  ctccgtctccatggccgcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggt 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctccgtctccatggccgcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggt 120

                                                                       
Query: 146 cggatccagggccgcgcacacgtctgcaggcagcaagaagatcgtcggcgtgttctacca 205
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggatccagggccgcgcacacgtctgcaggcagcaagaagatcgtcggcgtgttctacca 180

                                                                       
Query: 206 ggccggcgagtacgccgacgagaaccccaacttcgtcggctgcgtcgagggtgccctcgg 265
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggccggcgagtacgccgacaagaaccccaacttcgtcggctgcgtcgagggtgccctcgg 240

                                                                       
Query: 266 catacgcgactggctcgagtccaaggggcaccactacattgtcaccgacgacgaggaggg 325
           ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 241 catacgcgactggctcgagtcgaaggggcaccactacattgtcaccgacgacaaggaggg 300

                                                                       
Query: 326 gttgaacagcgagctggagaagcacattgaagacatgcatgtcctgataaccaccccatt 385
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttaacagcgagctggagaagcacattgaagacatgcatgtcctgataaccaccccatt 360

                                                                       
Query: 386 ccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttct 445
           |||||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||
Sbjct: 361 ccacccagcctatgttactgcagaaaagatcaagaaggcaaagacccccgagctgcttct 420

                                                               
Query: 446 cacagctgggattggctcggaccatattgatttgccagctgctgctgctgca 497
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cacagctgggattggctcggaccatattgatttgccagctgctgctgctgca 472



to top

>gb|AF479036.1| Triticum aestivum formate dehydrogenase mRNA, partial cds
          Length = 801

 Score =  749 bits (378), Expect = 0.0
 Identities = 426/442 (96%)
 Strand = Plus / Plus

                                                                       
Query: 56  ggcagattgcttcttcctccgccgggatccctccgtctccatggccgcgatgtggagggc 115
           |||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||
Sbjct: 3   ggcagattgcttctccctccgccgggatctctccgtctccatggctgcgatgtgcagggc 62

                                                                       
Query: 116 cgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcgcacacgtctgcagg 175
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct: 63  cgccgcgaggcagctcgtcgaccgggccgtcggatccagggccgcgcacacgtccgcggg 122

                                                                       
Query: 176 cagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaaccccaa 235
           ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 123 cagcaagaagatcgtgggcgtgttctaccaggccggcgagtacgccgacaagaaccccaa 182

                                                                       
Query: 236 cttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaaggggca 295
           |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cttcgtcggctgtgttgagggggccctcggcatacgcgactggctcgagtccaaggggca 242

                                                                       
Query: 296 ccactacattgtcaccgacgacgaggaggggttgaacagcgagctggagaagcacattga 355
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcactacattgtcaccgacgacaaggaggggttgaacagcgagctggagaagcacattga 302

                                                                       
Query: 356 agacatgcatgtcctgataaccaccccattccacccagcctatgttactgcagagaggat 415
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agacatgcatgttctgataaccaccccattccacccagcctatgttactgcagagaggat 362

                                                                       
Query: 416 caagaaggcaaagaacctcgagctgcttctcacagctgggattggctcggaccatattga 475
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 363 caagaaggcaaagaacctcgagctgcttctcacagctgggattggctcagaccatattga 422

                                 
Query: 476 tttgccagctgctgctgctgca 497
           ||||||||||||||||||||||
Sbjct: 423 tttgccagctgctgctgctgca 444



to top

>dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E04, full
           insert sequence
          Length = 1637

 Score =  452 bits (228), Expect = e-124
 Identities = 351/392 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
           |||||||||||||| || ||| |||| ||  ||| ||| ||| |||| ||||||||||||
Sbjct: 89  gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 148

                                                                       
Query: 162 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 221
           ||||| || |||||||||||||||||||| || ||||||||| ||| |||||||||||||
Sbjct: 149 cacacatcagcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgcc 208

                                                                       
Query: 222 gacgagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 281
           ||| |||| |||||||||||||||||||| ||||| || |||||||| ||||| ||||| 
Sbjct: 209 gacaagaatcccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggctt 268

                                                                       
Query: 282 gagtccaaggggcaccactacattgtcaccgacgacgaggaggggttgaacagcgagctg 341
           |||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 269 gagtccaaggggcatcactacattgtcaccgacgacaaggaggggctaaacagcgagctg 328

                                                                       
Query: 342 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 401
           |||||||||||||| || ||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 329 gagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcctatgtt 388

                                                                       
Query: 402 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 461
           |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 389 agcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggg 448

                                           
Query: 462 tcggaccatattgatttgccagctgctgctgc 493
           || || ||||||||| ||||||| ||||||||
Sbjct: 449 tcagatcatattgatctgccagcagctgctgc 480



to top

>dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048A01, full
           insert sequence
          Length = 1648

 Score =  452 bits (228), Expect = e-124
 Identities = 351/392 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
           |||||||||||||| || ||| |||| ||  ||| ||| ||| |||| ||||||||||||
Sbjct: 100 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 159

                                                                       
Query: 162 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 221
           ||||| || |||||||||||||||||||| || ||||||||| ||| |||||||||||||
Sbjct: 160 cacacatcagcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgcc 219

                                                                       
Query: 222 gacgagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 281
           ||| |||| |||||||||||||||||||| ||||| || |||||||| ||||| ||||| 
Sbjct: 220 gacaagaatcccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggctt 279

                                                                       
Query: 282 gagtccaaggggcaccactacattgtcaccgacgacgaggaggggttgaacagcgagctg 341
           |||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 280 gagtccaaggggcatcactacattgtcaccgacgacaaggaggggctaaacagcgagctg 339

                                                                       
Query: 342 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 401
           |||||||||||||| || ||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 340 gagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcctatgtt 399

                                                                       
Query: 402 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 461
           |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 400 agcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggg 459

                                           
Query: 462 tcggaccatattgatttgccagctgctgctgc 493
           || || ||||||||| ||||||| ||||||||
Sbjct: 460 tcagatcatattgatctgccagcagctgctgc 491



to top

>dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehydrogenase, complete
           cds
          Length = 1449

 Score =  452 bits (228), Expect = e-124
 Identities = 351/392 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
           |||||||||||||| || ||| |||| ||  ||| ||| ||| |||| ||||||||||||
Sbjct: 103 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 162

                                                                       
Query: 162 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 221
           ||||| || |||||||||||||||||||| || ||||||||| ||| |||||||||||||
Sbjct: 163 cacacatcagcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgcc 222

                                                                       
Query: 222 gacgagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 281
           ||| |||| |||||||||||||||||||| ||||| || |||||||| ||||| ||||| 
Sbjct: 223 gacaagaatcccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggctt 282

                                                                       
Query: 282 gagtccaaggggcaccactacattgtcaccgacgacgaggaggggttgaacagcgagctg 341
           |||||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||
Sbjct: 283 gagtccaaggggcatcactacattgtcaccgacgacaaggaggggctaaacagcgagctg 342

                                                                       
Query: 342 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 401
           |||||||||||||| || ||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 343 gagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcctatgtt 402

                                                                       
Query: 402 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 461
           |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 403 agcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggg 462

                                           
Query: 462 tcggaccatattgatttgccagctgctgctgc 493
           || || ||||||||| ||||||| ||||||||
Sbjct: 463 tcagatcatattgatctgccagcagctgctgc 494



to top

>gb|BT016309.1| Zea mays clone Contig142 mRNA sequence
          Length = 1507

 Score =  402 bits (203), Expect = e-109
 Identities = 347/395 (87%)
 Strand = Plus / Plus

                                                                       
Query: 102 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
           |||||||||||||||||||| |||||||| |||||||||||| |||| || |||||||||
Sbjct: 102 gcgatgtggagggccgccgctaggcagctggtcgaccgggcgctcggctcaagggccgcg 161

                                                                       
Query: 162 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 221
           ||||||||| |||||||||| ||||| ||||| ||||||||| ||||||| ||||| |||
Sbjct: 162 cacacgtctacaggcagcaaaaagatagtcggggtgttctacaaggccggggagtatgcc 221

                                                                       
Query: 222 gacgagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 281
           ||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 222 gacaagaaccccaacttcgtcggctgcgtcgagggtgcactcggcatccgcggctggctc 281

                                                                       
Query: 282 gagtccaaggggcaccactacattgtcaccgacgacgaggaggggttgaacagcgagctg 341
           |||||  |||| || || |||||||||||||| ||| |||| ||    ||| | || |||
Sbjct: 282 gagtcgcagggccatcaatacattgtcaccgatgacaaggaaggccccaactgtgaactg 341

                                                                       
Query: 342 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 401
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| 
Sbjct: 342 gagaagcacattgaagacatgcatgtcctgattaccaccccattccacccagcttatgtc 401

                                                                       
Query: 402 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 461
           |||||||||||||| |||||||| ||||| || ||||| |||||||| || || || |||
Sbjct: 402 actgcagagaggataaagaaggcgaagaatcttgagcttcttctcacggcaggaatcggc 461

                                              
Query: 462 tcggaccatattgatttgccagctgctgctgctgc 496
           || || ||||||||| | ||||| |||||||||||
Sbjct: 462 tccgatcatattgatcttccagcagctgctgctgc 496



to top

>gb|AY111955.1| Zea mays CL15209_1 mRNA sequence
          Length = 1667

 Score =  394 bits (199), Expect = e-106
 Identities = 331/375 (88%)
 Strand = Plus / Plus

                                                                       
Query: 102 gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
           |||||||||||||||||||| |||||||| |||||||||||| |||| || |||||||||
Sbjct: 107 gcgatgtggagggccgccgctaggcagctggtcgaccgggcgctcggctcaagggccgcg 166

                                                                       
Query: 162 cacacgtctgcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgcc 221
           ||||||||| |||||||||||||||| ||||| ||||||||| ||||||| ||||| |||
Sbjct: 167 cacacgtctacaggcagcaagaagatagtcggggtgttctacaaggccggggagtatgcc 226

                                                                       
Query: 222 gacgagaaccccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctc 281
           ||| |||||||||||||||||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 227 gacaagaaccccaacttcgtcggctgcgtcgagggtgcactcggcatccgcggctggctc 286

                                                                       
Query: 282 gagtccaaggggcaccactacattgtcaccgacgacgaggaggggttgaacagcgagctg 341
           |||||  |||| || || |||||||||||||| ||| |||| ||    ||| | || |||
Sbjct: 287 gagtcgcagggccatcagtacattgtcaccgatgacaaggaaggccccaactgtgaactg 346

                                                                       
Query: 342 gagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcctatgtt 401
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| 
Sbjct: 347 gagaagcacattgaagacatgcatgtcctgattaccaccccattccacccagcttatgtc 406

                                                                       
Query: 402 actgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctgggattggc 461
           |||||||||||||| |||||||| ||||| || ||||| |||||||| || || || |||
Sbjct: 407 actgcagagaggataaagaaggcgaagaatcttgagcttcttctcacggcaggaatcggc 466

                          
Query: 462 tcggaccatattgat 476
           || || |||||||||
Sbjct: 467 tccgatcatattgat 481



to top

>dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B06, full
           insert sequence
          Length = 1872

 Score =  218 bits (110), Expect = 1e-53
 Identities = 236/278 (84%)
 Strand = Plus / Plus

                                                                       
Query: 171 gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
           ||||||||||||||| |||| || ||||||||| |||  ||| |||| |||||| |||| 
Sbjct: 627 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcaagtatgccgacaagaat 686

                                                                       
Query: 231 cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
           |||||||||||||||||||||||    || |||||||| |||| |||||| || || |||
Sbjct: 687 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 746

                                                                       
Query: 291 gggcaccactacattgtcaccgacgacgaggaggggttgaacagcgagctggagaagcac 350
           ||||| | ||||||||||||||| ||| |||||||| | ||| |||||||||||||||||
Sbjct: 747 gggcatcgctacattgtcaccgatgacaaggaggggataaactgcgagctggagaagcac 806

                                                                       
Query: 351 attgaagacatgcatgtcctgataaccaccccattccacccagcctatgttactgcagag 410
           || || ||    || |||||||| |||||||||||||||||||||||  | || ||||||
Sbjct: 807 atcgaggatgcccacgtcctgatcaccaccccattccacccagcctacatcaccgcagag 866

                                                 
Query: 411 aggatcaagaaggcaaagaacctcgagctgcttctcac 448
           |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 867 aggatcaagaaggccaagaacctggagcttcttctcac 904



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  210 bits (106), Expect = 3e-51
 Identities = 145/158 (91%)
 Strand = Plus / Plus

                                                                            
Query: 336      gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 395
                |||||||||||||||||||| || ||||||||| |||| |||||||| ||||||||||||
Sbjct: 16432791 gagctggagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcc 16432850

                                                                            
Query: 396      tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 455
                |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16432851 tatgttagcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 16432910

                                                      
Query: 456      attggctcggaccatattgatttgccagctgctgctgc 493
                ||||| || || ||||||||| ||||||| ||||||||
Sbjct: 16432911 attgggtcagatcatattgatctgccagcagctgctgc 16432948



 Score =  202 bits (102), Expect = 8e-49
 Identities = 150/166 (90%)
 Strand = Plus / Plus

                                                                            
Query: 171      gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
                |||||||||||||||||||| || ||||||||| ||| |||||||||||||||| |||| 
Sbjct: 16431987 gcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaat 16432046

                                                                            
Query: 231      cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
                |||||||||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 16432047 cccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaag 16432106

                                                              
Query: 291      gggcaccactacattgtcaccgacgacgaggaggggttgaacagcg 336
                ||||| ||||||||||||||||||||| |||||||| | |||||||
Sbjct: 16432107 gggcatcactacattgtcaccgacgacaaggaggggctaaacagcg 16432152



 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                            
Query: 171      gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
                ||||||||||||||| |||| || ||||||||| |||  |||||||| |||||| |||| 
Sbjct: 16461801 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcgagtatgccgacaagaat 16461860

                                                                            
Query: 231      cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
                |||||||||||||||||||||||    || |||||||| |||| |||||| || || |||
Sbjct: 16461861 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 16461920

                                                    
Query: 291      gggcaccactacattgtcaccgacgacgaggagggg 326
                ||||| | ||||||||||||||| ||| ||||||||
Sbjct: 16461921 gggcatcgctacattgtcaccgatgacaaggagggg 16461956



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                            
Query: 336      gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 395
                ||||||||||||||||| || ||    || |||||||| |||||||||||||||||||||
Sbjct: 16462620 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccacccagcc 16462679

                                                                     
Query: 396      tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcac 448
                ||  | || |||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 16462680 tacatcaccgcagagaggatcaagaaggccaagaacctggagcttcttctcac 16462732



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 102      gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
                |||||||||||||| || ||| |||| ||  ||| ||| ||| |||| ||||||||||||
Sbjct: 16431506 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 16431565

                   
Query: 162      cac 164
                |||
Sbjct: 16431566 cac 16431568



to top

>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0404G03
          Length = 135225

 Score =  210 bits (106), Expect = 3e-51
 Identities = 145/158 (91%)
 Strand = Plus / Plus

                                                                         
Query: 336   gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 395
             |||||||||||||||||||| || ||||||||| |||| |||||||| ||||||||||||
Sbjct: 42109 gagctggagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcc 42168

                                                                         
Query: 396   tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 455
             |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42169 tatgttagcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 42228

                                                   
Query: 456   attggctcggaccatattgatttgccagctgctgctgc 493
             ||||| || || ||||||||| ||||||| ||||||||
Sbjct: 42229 attgggtcagatcatattgatctgccagcagctgctgc 42266



 Score =  202 bits (102), Expect = 8e-49
 Identities = 150/166 (90%)
 Strand = Plus / Plus

                                                                         
Query: 171   gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
             |||||||||||||||||||| || ||||||||| ||| |||||||||||||||| |||| 
Sbjct: 41305 gcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaat 41364

                                                                         
Query: 231   cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
             |||||||||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 41365 cccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaag 41424

                                                           
Query: 291   gggcaccactacattgtcaccgacgacgaggaggggttgaacagcg 336
             ||||| ||||||||||||||||||||| |||||||| | |||||||
Sbjct: 41425 gggcatcactacattgtcaccgacgacaaggaggggctaaacagcg 41470



 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                         
Query: 171   gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
             ||||||||||||||| |||| || ||||||||| |||  |||||||| |||||| |||| 
Sbjct: 71119 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcgagtatgccgacaagaat 71178

                                                                         
Query: 231   cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
             |||||||||||||||||||||||    || |||||||| |||| |||||| || || |||
Sbjct: 71179 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 71238

                                                 
Query: 291   gggcaccactacattgtcaccgacgacgaggagggg 326
             ||||| | ||||||||||||||| ||| ||||||||
Sbjct: 71239 gggcatcgctacattgtcaccgatgacaaggagggg 71274



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                         
Query: 336   gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 395
             ||||||||||||||||| || ||    || |||||||| |||||||||||||||||||||
Sbjct: 71938 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccacccagcc 71997

                                                                  
Query: 396   tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcac 448
             ||  | || |||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 71998 tacatcaccgcagagaggatcaagaaggccaagaacctggagcttcttctcac 72050



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 102   gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
             |||||||||||||| || ||| |||| ||  ||| ||| ||| |||| ||||||||||||
Sbjct: 40824 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 40883

                
Query: 162   cac 164
             |||
Sbjct: 40884 cac 40886



to top

>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0008F02
          Length = 139655

 Score =  210 bits (106), Expect = 3e-51
 Identities = 145/158 (91%)
 Strand = Plus / Plus

                                                                          
Query: 336    gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 395
              |||||||||||||||||||| || ||||||||| |||| |||||||| ||||||||||||
Sbjct: 109354 gagctggagaagcacattgaggatatgcatgtcttgatcaccacccctttccacccagcc 109413

                                                                          
Query: 396    tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 455
              |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109414 tatgttagcgcagaaaggatcaagaaggcaaagaacctcgagctgcttctcacagctggg 109473

                                                    
Query: 456    attggctcggaccatattgatttgccagctgctgctgc 493
              ||||| || || ||||||||| ||||||| ||||||||
Sbjct: 109474 attgggtcagatcatattgatctgccagcagctgctgc 109511



 Score =  202 bits (102), Expect = 8e-49
 Identities = 150/166 (90%)
 Strand = Plus / Plus

                                                                          
Query: 171    gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
              |||||||||||||||||||| || ||||||||| ||| |||||||||||||||| |||| 
Sbjct: 108550 gcaggcagcaagaagatcgtgggtgtgttctacaagggcggcgagtacgccgacaagaat 108609

                                                                          
Query: 231    cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
              |||||||||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 108610 cccaacttcgtcggctgcgtggagggcgctctcggcatccgcgaatggcttgagtccaag 108669

                                                            
Query: 291    gggcaccactacattgtcaccgacgacgaggaggggttgaacagcg 336
              ||||| ||||||||||||||||||||| |||||||| | |||||||
Sbjct: 108670 gggcatcactacattgtcaccgacgacaaggaggggctaaacagcg 108715



 Score =  127 bits (64), Expect = 4e-26
 Identities = 133/156 (85%)
 Strand = Plus / Plus

                                                                          
Query: 171    gcaggcagcaagaagatcgtcggcgtgttctaccaggccggcgagtacgccgacgagaac 230
              ||||||||||||||| |||| || ||||||||| |||  |||||||| |||||| |||| 
Sbjct: 138364 gcaggcagcaagaaggtcgtgggtgtgttctacaagggtggcgagtatgccgacaagaat 138423

                                                                          
Query: 231    cccaacttcgtcggctgcgtcgagggtgccctcggcatacgcgactggctcgagtccaag 290
              |||||||||||||||||||||||    || |||||||| |||| |||||| || || |||
Sbjct: 138424 cccaacttcgtcggctgcgtcgactccgctctcggcattcgcggctggcttgaatctaag 138483

                                                  
Query: 291    gggcaccactacattgtcaccgacgacgaggagggg 326
              ||||| | ||||||||||||||| ||| ||||||||
Sbjct: 138484 gggcatcgctacattgtcaccgatgacaaggagggg 138519



 Score =  105 bits (53), Expect = 1e-19
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                          
Query: 336    gagctggagaagcacattgaagacatgcatgtcctgataaccaccccattccacccagcc 395
              ||||||||||||||||| || ||    || |||||||| |||||||||||||||||||||
Sbjct: 139183 gagctggagaagcacatcgaggatgcccacgtcctgatcaccaccccattccacccagcc 139242

                                                                   
Query: 396    tatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcac 448
              ||  | || |||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 139243 tacatcaccgcagagaggatcaagaaggccaagaacctggagcttcttctcac 139295



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                          
Query: 102    gcgatgtggagggccgccgcgaggcagctcgtcgaccgggcggtcggatccagggccgcg 161
              |||||||||||||| || ||| |||| ||  ||| ||| ||| |||| ||||||||||||
Sbjct: 108069 gcgatgtggagggcggcggcggggcatcttctcggccgcgcgctcggctccagggccgcg 108128

                 
Query: 162    cac 164
              |||
Sbjct: 108129 cac 108131



to top

>emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrogenase (ORF1)
          Length = 1513

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Plus

                                                                       
Query: 363 catgtcctgataaccaccccattccacccagcctatgttactgcagagaggatcaagaag 422
           ||||| || ||||| ||||| ||||| || ||||||||||| || || ||||||| ||||
Sbjct: 369 catgttctcataactacccccttccatccggcctatgttacggctgaaaggatcacgaag 428

                                                                       
Query: 423 gcaaagaacctcgagctgcttctcacagctgggattggctcggaccatattgatttgcca 482
           || ||||| ||  |  |||| ||||||||||| ||||| || || |||||||||||||| 
Sbjct: 429 gccaagaatctgcaattgctgctcacagctggaattggttctgatcatattgatttgcct 488

                         
Query: 483 gctgctgctgctgc 496
           ||||||||||||||
Sbjct: 489 gctgctgctgctgc 502



to top

>ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE); oxidoreductase,
           acting on the CH-OH group of donors, NAD or NADP as
           acceptor AT5G14780 (FDH) mRNA, complete cds
          Length = 1518

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 369 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 428

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 429 ctcacagctggtattggctcggatcatattgat 461



to top

>emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC clone T9L3 (ESSA project)
          Length = 89370

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                         
Query: 384   ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
             |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 45227 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 45286

                                              
Query: 444   ctcacagctgggattggctcggaccatattgat 476
             ||||||||||| ||||||||||| |||||||||
Sbjct: 45287 ctcacagctggtattggctcggatcatattgat 45319



to top

>gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds
          Length = 1155

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 310 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 369

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 370 ctcacagctggtattggctcggatcatattgat 402



to top

>gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1B (FDH1B)
           mRNA, complete cds
          Length = 1508

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 359 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 418

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 419 ctcacagctggtattggctcggatcatattgat 451



to top

>gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1A (FDH1A)
           mRNA, complete cds
          Length = 1439

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 367 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 426

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 427 ctcacagctggtattggctcggatcatattgat 459



to top

>gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds
          Length = 1494

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 94/115 (81%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 365 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 424

                                                                  
Query: 444 ctcacagctgggattggctcggaccatattgatttgc---cagctgctgctgctg 495
           ||||||||||| ||||||||||| ||||||||| | |   |||||||||||||||
Sbjct: 425 ctcacagctggtattggctcggatcatattgatctccaggcagctgctgctgctg 479



to top

>gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds
          Length = 1443

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 369 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 428

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 429 ctcacagctggtattggctcggatcatattgat 461



to top

>dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydrogenase, complete
           cds
          Length = 1381

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 310 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 369

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 370 ctcacagctggtattggctcggatcatattgat 402



to top

>gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenase (FDH) mRNA, complete cds
          Length = 1490

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                       
Query: 384 ttccacccagcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgctt 443
           |||||||| || ||||| ||||| || || |||||||| || || ||| |  |||| || 
Sbjct: 369 ttccacccggcgtatgtaactgctgaaagaatcaagaaagccaaaaacttgaagcttctc 428

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 429 ctcacagctggtattggctcggatcatattgat 461



to top

>emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL6ZD02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1428

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 415 ctcacagctggtattggctcggatcatattgat 447



to top

>gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete sequence
          Length = 1514

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 444 ctcacagctgggattggctcggaccatattgat 476
           ||||||||||| ||||||||||| |||||||||
Sbjct: 429 ctcacagctggtattggctcggatcatattgat 461



to top

>emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydrogenase
          Length = 1262

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 393 gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 452
           |||||||| || || || ||||||||||||||||| || ||  | || || || ||||||
Sbjct: 315 gcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaactactgctgacagct 374

                                                       
Query: 453 gggattggctcggaccatattgatttgccagctgctgctgctgc 496
           || ||||| || || ||| ||||| ||  |||||||||||||||
Sbjct: 375 ggaattggatcagatcatgttgatctgaaagctgctgctgctgc 418



to top

>emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydrogenase (fdh gene)
          Length = 1572

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 84/104 (80%)
 Strand = Plus / Plus

                                                                       
Query: 393 gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 452
           |||||||| || || || ||||||||||||||||| || ||  | || || || ||||||
Sbjct: 459 gcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagct 518

                                                       
Query: 453 gggattggctcggaccatattgatttgccagctgctgctgctgc 496
           || ||||| || || ||| ||||| ||  |||||||||||||||
Sbjct: 519 ggaattggatcagatcatgttgatctgaaagctgctgctgctgc 562



to top

>gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, partial cds
          Length = 597

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 450 gctgggattggctcggaccatattgatttgccagctgctgctgctgc 496
           ||||| |||||||| || ||||||||| | ||||| |||||||||||
Sbjct: 1   gctggaattggctcagatcatattgatcttccagcagctgctgctgc 47



to top

>ref|XM_466474.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1251

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 405 gcagagaggatcaagaaggcaa 426
           ||||||||||||||||||||||
Sbjct: 268 gcagagaggatcaagaaggcaa 289



to top

>ref|XM_466475.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1799

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 405 gcagagaggatcaagaaggcaa 426
           ||||||||||||||||||||||
Sbjct: 719 gcagagaggatcaagaaggcaa 698



to top

>gb|AC158603.6| Mus musculus 10 BAC RP24-466C12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 149929

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 373    taaccaccccattccacccagc 394
              ||||||||||||||||||||||
Sbjct: 120743 taaccaccccattccacccagc 120722



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 405      gcagagaggatcaagaaggcaa 426
                ||||||||||||||||||||||
Sbjct: 22844457 gcagagaggatcaagaaggcaa 22844436



to top

>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0006O15
          Length = 139723

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 405   gcagagaggatcaagaaggcaa 426
             ||||||||||||||||||||||
Sbjct: 77795 gcagagaggatcaagaaggcaa 77774



to top

>dbj|AK100917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133E20, full
            insert sequence
          Length = 5035

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 405  gcagagaggatcaagaaggcaa 426
            ||||||||||||||||||||||
Sbjct: 3286 gcagagaggatcaagaaggcaa 3265



to top

>dbj|AK068984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003M09, full
           insert sequence
          Length = 1798

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 405 gcagagaggatcaagaaggcaa 426
           ||||||||||||||||||||||
Sbjct: 719 gcagagaggatcaagaaggcaa 698



to top

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 202     accaggccggcgagtacgccgacgag 227
               |||||||| |||||||||||||||||
Sbjct: 1767090 accaggcccgcgagtacgccgacgag 1767115



to top

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 184     agatcgtcggcgtgttctaccaggc 208
               ||||||||||||||||| |||||||
Sbjct: 5442453 agatcgtcggcgtgttcaaccaggc 5442429



to top

>gb|AC158353.3| Mus musculus chromosome 8, clone RP24-363C18, complete sequence
          Length = 161841

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 340   tggagaagcacattgaagaca 360
             |||||||||||||||||||||
Sbjct: 17043 tggagaagcacattgaagaca 17063



to top

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 116     cgccgcgaggcagctcgtcgaccgg 140
               |||||||| ||||||||||||||||
Sbjct: 3787866 cgccgcgatgcagctcgtcgaccgg 3787842



to top

>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ccaggccggcgagtacgccga 223
             |||||||||||||||||||||
Sbjct: 37859 ccaggccggcgagtacgccga 37879



to top

>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence
          Length = 234778

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 340   tggagaagcacattgaagaca 360
             |||||||||||||||||||||
Sbjct: 28294 tggagaagcacattgaagaca 28274



to top

>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
              BACR48D02, complete sequence
          Length = 181728

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 476    tttgccagctgctgctgctgc 496
              |||||||||||||||||||||
Sbjct: 101849 tttgccagctgctgctgctgc 101869



to top

>ref|XM_216791.3| PREDICTED: Rattus norvegicus similar to [Mouse primary response gene
            B94 mRNA, 3end.], gene product (LOC299339), mRNA
          Length = 2996

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 476  tttgccagctgctgctgctgc 496
            |||||||||||||||||||||
Sbjct: 2045 tttgccagctgctgctgctgc 2025



to top

>gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, region 24D3-24D5, P1 clone
             DS04766, complete sequence
          Length = 64879

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 476   tttgccagctgctgctgctgc 496
             |||||||||||||||||||||
Sbjct: 50313 tttgccagctgctgctgctgc 50333



to top

>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete
             sequence
          Length = 290034

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 476   tttgccagctgctgctgctgc 496
             |||||||||||||||||||||
Sbjct: 22609 tttgccagctgctgctgctgc 22629



to top

>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 194  cgtgttctaccaggccggcg 213
            ||||||||||||||||||||
Sbjct: 5775 cgtgttctaccaggccggcg 5794



to top

>ref|XM_516862.1| PREDICTED: Pan troglodytes similar to golgi phosphoprotein 4; type II
            Golgi membrane protein; 130 kDa golgi-localized
            phosphoprotein; cis Golgi-localized calcium-binding
            protein (LOC460835), mRNA
          Length = 2145

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1417 ttgccagctgctgctgctgc 1398



to top

>gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, complete sequence
          Length = 220872

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   gtctgcaggcagcaagaaga 186
             ||||||||||||||||||||
Sbjct: 58088 gtctgcaggcagcaagaaga 58069



to top

>gb|AY779562.1| HIV-1 isolate CANC6FULL from Canada, complete genome
          Length = 8711

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 439 tgccagctgctgctgctgcttgct 416



to top

>gb|AY779560.1| HIV-1 isolate CANC3FULL from Canada, complete genome
          Length = 8717

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 439 tgccagctgctgctgctgcttgct 416



to top

>gb|AY779557.1| HIV-1 isolate CANC10FULL from Canada, complete genome
          Length = 8711

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 439 tgccagctgctgctgctgcttgct 416



to top

>gb|DQ097749.1| HIV-1 isolate V3 from USA nonfunctional gag protein (gag) gene,
           complete sequence; and nonfunctional pol protein (pol)
           gene, partial sequence
          Length = 3079

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 370 tgccagctgctgctgctgcttgct 347



to top

>gb|U64851.1| Caenorhabditis elegans cosmid F28A12, complete sequence
          Length = 26711

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   ttgccagctgctgctgctgc 496
             ||||||||||||||||||||
Sbjct: 26500 ttgccagctgctgctgctgc 26519



to top

>ref|XM_359978.1| Magnaporthe grisea 70-15 hypothetical protein (MG05353.4) partial
            mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  cagctgctgctgctgcatgc 500
            ||||||||||||||||||||
Sbjct: 1359 cagctgctgctgctgcatgc 1340



to top

>gb|AC186367.2| Gallus gallus BAC clone TAM31-55N19 from chromosome 17, complete sequence
          Length = 181509

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    gccagctgctgctgctgcat 498
              ||||||||||||||||||||
Sbjct: 148263 gccagctgctgctgctgcat 148282



to top

>ref|XM_425348.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC427777), mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 482 agctgctgctgctgcatgct 501
           ||||||||||||||||||||
Sbjct: 773 agctgctgctgctgcatgct 792



to top

>gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome 8, complete sequence
          Length = 192627

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   ccagctgctgctgctgcatg 499
             ||||||||||||||||||||
Sbjct: 60075 ccagctgctgctgctgcatg 60094



to top

>gb|AY360912.1| HIV-1 isolate gag10 from United Kingdom gag protein (gag) gene,
           partial cds
          Length = 698

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 262 tgccagctgctgctgctgcttgct 239



to top

>ref|NM_009396.1| Mus musculus tumor necrosis factor, alpha-induced protein 2
            (Tnfaip2), mRNA
          Length = 3512

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1744 ttgccagctgctgctgctgc 1725



to top

>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence
          Length = 202934

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    tgtcctgataaccaccccat 384
              ||||||||||||||||||||
Sbjct: 103422 tgtcctgataaccaccccat 103403



to top

>gb|AC164982.2| Mus musculus BAC clone RP23-57A9 from chromosome 9, complete sequence
          Length = 247463

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    cctccgccgggatccctccg 90
             ||||||||||||||||||||
Sbjct: 41150 cctccgccgggatccctccg 41131



to top

>ref|XM_994259.1| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 2
            (Mll2), mRNA
          Length = 6639

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  gccagctgctgctgctgcat 498
            ||||||||||||||||||||
Sbjct: 1508 gccagctgctgctgctgcat 1489



to top

>ref|XM_619357.3| PREDICTED: Mus musculus myeloid/lymphoid or mixed-lineage leukemia 2
            (Mll2), mRNA
          Length = 6639

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  gccagctgctgctgctgcat 498
            ||||||||||||||||||||
Sbjct: 1508 gccagctgctgctgctgcat 1489



to top

>ref|XM_001004343.1| PREDICTED: Mus musculus pleckstrin homology domain interacting
           protein (Phip), mRNA
          Length = 10936

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  cctccgccgggatccctccg 90
           ||||||||||||||||||||
Sbjct: 520 cctccgccgggatccctccg 501



to top

>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence
          Length = 252723

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gccagctgctgctgctgcat 498
             ||||||||||||||||||||
Sbjct: 41999 gccagctgctgctgctgcat 42018



to top

>gb|AC121787.3| Mus musculus BAC clone RP23-393K24 from chromosome 9, complete sequence
          Length = 200985

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    cctccgccgggatccctccg 90
             ||||||||||||||||||||
Sbjct: 79062 cctccgccgggatccctccg 79043



to top

>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence
          Length = 179390

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   ttgccagctgctgctgctgc 496
             ||||||||||||||||||||
Sbjct: 53791 ttgccagctgctgctgctgc 53810



to top

>gb|AC020786.20| Mus musculus chromosome 7, clone RP23-178G8, complete sequence
          Length = 227330

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gtctgcaggcagcaagaaga 186
              ||||||||||||||||||||
Sbjct: 225943 gtctgcaggcagcaagaaga 225924



to top

>gb|AE017160.1| Chlamydophila pneumoniae TW-183, section 4 of 4 of the complete genome
          Length = 324746

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ctgcagagaggatcaagaag 422
              ||||||||||||||||||||
Sbjct: 271910 ctgcagagaggatcaagaag 271929



to top

>ref|XM_777631.1| PREDICTED: Strongylocentrotus purpuratus similar to RNA
           methyltransferase like 1 (LOC577400), mRNA
          Length = 921

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 cagctgctgctgctgcatgc 500
           ||||||||||||||||||||
Sbjct: 353 cagctgctgctgctgcatgc 372



to top

>gb|AC166078.2| Mus musculus BAC clone RP23-13G1 from chromosome 9, complete sequence
          Length = 225128

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cctccgccgggatccctccg 90
             ||||||||||||||||||||
Sbjct: 34987 cctccgccgggatccctccg 35006



to top

>gb|AY206650.1| HIV-1 from USA patient R1 gag protein (gag) gene, complete cds
          Length = 1509

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 370 tgccagctgctgctgctgcttgct 347



to top

>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   cggctgcgtcgagggtgccctcgg 265
             |||| |||||||||||||||||||
Sbjct: 89505 cggcggcgtcgagggtgccctcgg 89528



to top

>gb|AC161165.5| Mus musculus chromosome 15, clone RP23-278C10, complete sequence
          Length = 176135

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gccagctgctgctgctgcat 498
             ||||||||||||||||||||
Sbjct: 58592 gccagctgctgctgctgcat 58611



to top

>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
             sequence
          Length = 199961

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ttgccagctgctgctgctgc 496
             ||||||||||||||||||||
Sbjct: 38297 ttgccagctgctgctgctgc 38278



to top

>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5,
             complete sequence
          Length = 197143

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ttgccagctgctgctgctgc 496
             ||||||||||||||||||||
Sbjct: 67732 ttgccagctgctgctgctgc 67713



to top

>gb|DQ122865.1| Chlamydomonas incerta 14-3-3-like protein-related protein mRNA,
           complete cds
          Length = 1423

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 480 ccagctgctgctgctgcatg 499
           ||||||||||||||||||||
Sbjct: 831 ccagctgctgctgctgcatg 812



to top

>gb|AE009847.1|AE009847 Pyrobaculum aerophilum strain IM2 section 102 of 201 of the complete
            genome
          Length = 10528

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  tcgtcggcgtgttctaccag 206
            ||||||||||||||||||||
Sbjct: 7224 tcgtcggcgtgttctaccag 7205



to top

>dbj|AK154405.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630027K13
            product:tumor necrosis factor, alpha-induced protein 2,
            full insert sequence
          Length = 3569

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1800 ttgccagctgctgctgctgc 1781



to top

>dbj|AK154155.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630005C12
            product:tumor necrosis factor, alpha-induced protein 2,
            full insert sequence
          Length = 3284

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1854 ttgccagctgctgctgctgc 1835



to top

>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome
          Length = 1229853

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    ctgcagagaggatcaagaag 422
              ||||||||||||||||||||
Sbjct: 894018 ctgcagagaggatcaagaag 893999



to top

>dbj|AK170719.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630116C17
            product:tumor necrosis factor, alpha-induced protein 2,
            full insert sequence
          Length = 3570

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1800 ttgccagctgctgctgctgc 1781



to top

>dbj|AK172653.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830225D24 product:tumor necrosis factor,
            alpha-induced protein 2, full insert sequence
          Length = 2575

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1800 ttgccagctgctgctgctgc 1781



to top

>emb|AJ586737.2| Drosophila virilis partial mod(mdg4) gene
          Length = 24391

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   ttgccagctgctgctgctgc 496
             ||||||||||||||||||||
Sbjct: 11199 ttgccagctgctgctgctgc 11218



to top

>dbj|AK032797.1| Mus musculus 12 days embryo male wolffian duct includes
          surrounding region cDNA, RIKEN full-length enriched
          library, clone:6720454M04 product:neuronal
          differentiation related protein, full insert sequence
          Length = 2495

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 cctccgccgggatccctccg 90
          ||||||||||||||||||||
Sbjct: 32 cctccgccgggatccctccg 13



to top

>gb|BC008165.1| Mus musculus tumor necrosis factor, alpha-induced protein 2, mRNA
           (cDNA clone IMAGE:3709243), partial cds
          Length = 2083

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 477 ttgccagctgctgctgctgc 496
           ||||||||||||||||||||
Sbjct: 298 ttgccagctgctgctgctgc 279



to top

>gb|AF084762.1|AF084762 HIV-1 pair E, infant, clone 11 p17 matrix (gag) gene, partial cds
          Length = 402

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 370 tgccagctgctgctgctgcttgct 347



to top

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    gcagctcgtcgaccgggcggtcgg 148
              ||||||||||||||| ||||||||
Sbjct: 152427 gcagctcgtcgaccgcgcggtcgg 152450



to top

>gb|AC159480.5| Mus musculus 6 BAC RP24-470K4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 168310

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   gccagctgctgctgctgcat 498
             ||||||||||||||||||||
Sbjct: 10679 gccagctgctgctgctgcat 10660



to top

>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone
              BACR13P06, complete sequence
          Length = 180699

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    gaacagcgagctggagaagc 348
              ||||||||||||||||||||
Sbjct: 109559 gaacagcgagctggagaagc 109540



to top

>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone
              BACR39E09, complete sequence
          Length = 163990

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    gaacagcgagctggagaagc 348
              ||||||||||||||||||||
Sbjct: 153384 gaacagcgagctggagaagc 153365



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 479      gccagctgctgctgctgcat 498
                ||||||||||||||||||||
Sbjct: 28669766 gccagctgctgctgctgcat 28669785



to top

>ref|XM_392144.2| PREDICTED: Apis mellifera similar to CG32296-PA (LOC408602), mRNA
          Length = 3672

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 479  gccagctgctgctgctgcat 498
            ||||||||||||||||||||
Sbjct: 2273 gccagctgctgctgctgcat 2254



to top

>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 233     caacttcgtcggctgcgtcgaggg 256
               |||||||||||||| |||||||||
Sbjct: 2152799 caacttcgtcggcttcgtcgaggg 2152776



to top

>gb|AF073389.1|AF073389 HIV-1 isolate 13010 from USA clone 12A gag protein (gag) gene,
           partial cds
          Length = 245

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 239 tgccagctgctgctgctgcttgct 216



to top

>gb|AF073386.1|AF073386 HIV-1 isolate 13010 from USA clone 7A gag protein (gag) gene,
           partial cds
          Length = 233

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 223 tgccagctgctgctgctgcttgct 200



to top

>gb|AF073385.1|AF073385 HIV-1 isolate 13010 from USA clone 6A gag protein (gag) gene,
           partial cds
          Length = 273

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 259 tgccagctgctgctgctgcttgct 236



to top

>gb|AF073382.1|AF073382 HIV-1 isolate 13010 from USA clone 2A gag protein (gag) gene,
           partial cds
          Length = 274

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 263 tgccagctgctgctgctgcttgct 240



to top

>gb|AC069211.15| Homo sapiens 3 BAC RP11-509E17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 107467

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tctgcaggcagcaagaagat 187
             ||||||||||||||||||||
Sbjct: 80768 tctgcaggcagcaagaagat 80787



to top

>ref|XM_343326.2| PREDICTED: Rattus norvegicus myeloid/lymphoid or mixed-lineage leukemia
             2 (predicted) (Mll2_predicted), mRNA
          Length = 15717

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   gccagctgctgctgctgcat 498
             ||||||||||||||||||||
Sbjct: 10241 gccagctgctgctgctgcat 10222



to top

>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome
          Length = 1230230

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 403     ctgcagagaggatcaagaag 422
               ||||||||||||||||||||
Sbjct: 1177396 ctgcagagaggatcaagaag 1177415



to top

>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence
          Length = 1226565

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 403     ctgcagagaggatcaagaag 422
               ||||||||||||||||||||
Sbjct: 1173802 ctgcagagaggatcaagaag 1173821



to top

>dbj|AK201033.1| Mus musculus cDNA, clone:Y1G0136M06, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000021710, based on BLAT search
          Length = 327

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 477 ttgccagctgctgctgctgc 496
           ||||||||||||||||||||
Sbjct: 307 ttgccagctgctgctgctgc 288



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 128     gctcgtcgaccgggcggtcg 147
               ||||||||||||||||||||
Sbjct: 2264292 gctcgtcgaccgggcggtcg 2264273



to top

>emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding formate dehydrogenase
          Length = 4392

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                        
Query: 393  gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 452
            |||||||| || || || |||||| |||||||||| || ||  | || || || ||||||
Sbjct: 2352 gcctatgtcacggctgaaaggatctagaaggcaaaaaatctacaactactgctgacagct 2411

                                                        
Query: 453  gggattggctcggaccatattgatttgccagctgctgctgctgc 496
            || ||||| || || ||| ||||| ||  |||||||||||||||
Sbjct: 2412 ggaattggatcagatcatgttgatctgaaagctgctgctgctgc 2455



to top

>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1409_C08
          Length = 90673

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   gccagctgctgctgctgcat 498
             ||||||||||||||||||||
Sbjct: 44936 gccagctgctgctgctgcat 44955



to top

>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones
             DS06954 and DS05325, complete sequence
          Length = 135182

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   gaacagcgagctggagaagc 348
             ||||||||||||||||||||
Sbjct: 35383 gaacagcgagctggagaagc 35402



to top

>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete
              sequence
          Length = 305162

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    gaacagcgagctggagaagc 348
              ||||||||||||||||||||
Sbjct: 172046 gaacagcgagctggagaagc 172027



to top

>gb|AF014195.1|AF014195 HIV-1 Patient 1498 from Glasgow MA-p17 (gag) gene, partial cds
          Length = 397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 478 tgccagctgctgctgctgcatgct 501
           ||||||||||||||||||| ||||
Sbjct: 302 tgccagctgctgctgctgcttgct 279



to top

>gb|AC163357.5| Mus musculus BAC clone RP23-3K10 from chromosome 12, complete sequence
          Length = 236266

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   ttgccagctgctgctgctgc 496
             ||||||||||||||||||||
Sbjct: 67988 ttgccagctgctgctgctgc 67969



to top

>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence
          Length = 205543

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    tgtcctgataaccaccccat 384
              ||||||||||||||||||||
Sbjct: 163877 tgtcctgataaccaccccat 163858



to top

>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12
          Length = 260050

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 205    aggccggcgagtacgccgacgaga 228
              ||||||||||| ||||||||||||
Sbjct: 240598 aggccggcgagaacgccgacgaga 240621



to top

>emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in linkage group 5,
            complete sequence
          Length = 195380

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 5974 ttgccagctgctgctgctgc 5993



to top

>emb|Z99993.1|STZ99993 Solanum tuberosum fdh2 gene encoding formate dehydrogenase
          Length = 1275

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                        
Query: 393  gcctatgttactgcagagaggatcaagaaggcaaagaacctcgagctgcttctcacagct 452
            |||||||| || || || |||||| |||||||||| || ||  | || || || ||||||
Sbjct: 977  gcctatgtcacggctgaaaggatctagaaggcaaaaaatctacaactactgctgacagct 1036

                                                        
Query: 453  gggattggctcggaccatattgatttgccagctgctgctgctgc 496
            || ||||| || || ||| ||||| ||  |||||||||||||||
Sbjct: 1037 ggaattggatcagatcatgttgatctgaaagctgctgctgctgc 1080



to top

>gb|L24118.1|MUSB94A Mouse primary response gene B94 mRNA, 3'end
          Length = 3512

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  ttgccagctgctgctgctgc 496
            ||||||||||||||||||||
Sbjct: 1744 ttgccagctgctgctgctgc 1725



to top

>emb|AL669966.10| Mouse DNA sequence from clone RP23-174K9 on chromosome 4, complete
             sequence
          Length = 199890

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 407   agagaggatcaagaaggcaaagaa 430
             |||||||||||||||| |||||||
Sbjct: 44264 agagaggatcaagaagacaaagaa 44241


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,349,373
Number of Sequences: 3902068
Number of extensions: 4349373
Number of successful extensions: 246126
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 245008
Number of HSP's gapped (non-prelim): 1111
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top