Clone Name | bart61h02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_507360.1| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1297 Score = 186 bits (94), Expect = 3e-44 Identities = 229/273 (83%), Gaps = 7/273 (2%) Strand = Plus / Plus Query: 59 cgtgctctaggttttggggatggaggccgagacggcggccaagagggcgcgggagagcga 118 ||||||||||||| | || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 119 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 177 Query: 119 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 178 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 178 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 231 Query: 179 cgggtggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtgga 238 || |||||||||||||| |||||||||||||| || |||| |||||| ||||||| || Sbjct: 232 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 291 Query: 239 gaaggtcctgttcctaggcaagtcagactaccaagatgtgctggttttccaggcctccac 298 ||||| || |||| ||| ||||| ||||||||| ||||| |||| || ||| ||||||| Sbjct: 292 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 351 Query: 299 ctacgggaaggtgctcgtcctggatggggtgat 331 ||||| |||||||| || |||||||| ||||| Sbjct: 352 gtacggcaaggtgcttgtgctggatggagtgat 384
>ref|XM_506281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1346 Score = 186 bits (94), Expect = 3e-44 Identities = 229/273 (83%), Gaps = 7/273 (2%) Strand = Plus / Plus Query: 59 cgtgctctaggttttggggatggaggccgagacggcggccaagagggcgcgggagagcga 118 ||||||||||||| | || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 120 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 178 Query: 119 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 178 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 179 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 232 Query: 179 cgggtggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtgga 238 || |||||||||||||| |||||||||||||| || |||| |||||| ||||||| || Sbjct: 233 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 292 Query: 239 gaaggtcctgttcctaggcaagtcagactaccaagatgtgctggttttccaggcctccac 298 ||||| || |||| ||| ||||| ||||||||| ||||| |||| || ||| ||||||| Sbjct: 293 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 352 Query: 299 ctacgggaaggtgctcgtcctggatggggtgat 331 ||||| |||||||| || |||||||| ||||| Sbjct: 353 gtacggcaaggtgcttgtgctggatggagtgat 385
>dbj|AK099606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E04, full insert sequence Length = 1346 Score = 186 bits (94), Expect = 3e-44 Identities = 229/273 (83%), Gaps = 7/273 (2%) Strand = Plus / Plus Query: 59 cgtgctctaggttttggggatggaggccgagacggcggccaagagggcgcgggagagcga 118 ||||||||||||| | || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 120 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 178 Query: 119 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 178 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 179 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 232 Query: 179 cgggtggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtgga 238 || |||||||||||||| |||||||||||||| || |||| |||||| ||||||| || Sbjct: 233 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 292 Query: 239 gaaggtcctgttcctaggcaagtcagactaccaagatgtgctggttttccaggcctccac 298 ||||| || |||| ||| ||||| ||||||||| ||||| |||| || ||| ||||||| Sbjct: 293 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 352 Query: 299 ctacgggaaggtgctcgtcctggatggggtgat 331 ||||| |||||||| || |||||||| ||||| Sbjct: 353 gtacggcaaggtgcttgtgctggatggagtgat 385
>dbj|AK060916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G07, full insert sequence Length = 1297 Score = 186 bits (94), Expect = 3e-44 Identities = 229/273 (83%), Gaps = 7/273 (2%) Strand = Plus / Plus Query: 59 cgtgctctaggttttggggatggaggccgagacggcggccaagagggcgcgggagagcga 118 ||||||||||||| | || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 119 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 177 Query: 119 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 178 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 178 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 231 Query: 179 cgggtggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtgga 238 || |||||||||||||| |||||||||||||| || |||| |||||| ||||||| || Sbjct: 232 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 291 Query: 239 gaaggtcctgttcctaggcaagtcagactaccaagatgtgctggttttccaggcctccac 298 ||||| || |||| ||| ||||| ||||||||| ||||| |||| || ||| ||||||| Sbjct: 292 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 351 Query: 299 ctacgggaaggtgctcgtcctggatggggtgat 331 ||||| |||||||| || |||||||| ||||| Sbjct: 352 gtacggcaaggtgcttgtgctggatggagtgat 384
>gb|BT024141.1| Zea mays clone EL01N0442H12 mRNA sequence Length = 1281 Score = 180 bits (91), Expect = 2e-42 Identities = 151/171 (88%) Strand = Plus / Plus Query: 155 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 214 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 100 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 159 Query: 215 cgaggtacactcgctgaaggtggagaaggtcctgttcctaggcaagtcagactaccaaga 274 |||| ||||| |||||||||||||||| ||||||| ||| ||||||||||||||| | Sbjct: 160 tgaggcgcactctttgaaggtggagaaggtgctgttccaagggaagtcagactaccaaaa 219 Query: 275 tgtgctggttttccaggcctccacctacgggaaggtgctcgtcctggatgg 325 || |||| || ||| |||| || |||||||||||||||||||| ||||| Sbjct: 220 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtccttgatgg 270 Score = 56.0 bits (28), Expect = 7e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 78 atggaggccgagacggcggccaagagggcgcgggagagcg 117 ||||||||||| |||||||||||||| |||||||||||| Sbjct: 44 atggaggccgatgcggcggccaagaggacgcgggagagcg 83
>emb|AJ251298.1|OSA251298 Oryza sativa mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1308 Score = 178 bits (90), Expect = 7e-42 Identities = 228/273 (83%), Gaps = 7/273 (2%) Strand = Plus / Plus Query: 59 cgtgctctaggttttggggatggaggccgagacggcggccaagagggcgcgggagagcga 118 ||||||||||||| | || |||||||||||| ||||||| ||||||||||||||||||| Sbjct: 82 cgtgctctaggttctcgg-atggaggccgaggcggcggcgaagagggcgcgggagagcgg 140 Query: 119 tggcgctgcggcggcggcggacggagccgttgagcaggcggggatctccgccgtcatccc 178 || ||| |||||||| ||| |||| ||||||||||| ||||| ||||||||||| Sbjct: 141 tgacgcggcggcggc------cggtgccggcgagcaggcgggtatctctgccgtcatccc 194 Query: 179 cgggtggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtgga 238 || |||||||||||||| |||||||||||||| || |||| |||||| ||||||| || Sbjct: 195 tggatggttctccgagattagccccatgtggcctggtgaggcacactcattgaaggtcga 254 Query: 239 gaaggtcctgttcctaggcaagtcagactaccaagatgtgctggttttccaggcctccac 298 ||||| || |||| ||| ||||| ||||||||| ||||| |||| || ||| ||||||| Sbjct: 255 aaaggtactattccaaggaaagtcggactaccaaaatgtgatggtgtttcagtcctccac 314 Query: 299 ctacgggaaggtgctcgtcctggatggggtgat 331 ||||| ||||| || || |||||||| ||||| Sbjct: 315 gtacggcaaggttcttgtgctggatggagtgat 347
>gb|AY103592.1| Zea mays PCO075678 mRNA sequence Length = 1471 Score = 165 bits (83), Expect = 1e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 155 ggcggggatctccgccgtcatccccgggtggttctccgagatcagccccatgtggcccgg 214 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 159 ggcggggatctccgccgtcatcccgggatggttctccgagatcagccccatgtggcccgg 218 Query: 215 cgaggtacactcgctgaaggtggagaaggtcctgttcctaggcaagtcagactaccaaga 274 |||| ||||| |||||||||| ||||| ||||||| ||| ||||||||||||||| Sbjct: 219 tgaggcgcactctttgaaggtggacaaggtgctgttccaagggaagtcagactaccaaag 278 Query: 275 tgtgctggttttccaggcctccacctacgggaaggtgctcgtcctggatgg 325 || |||| || ||| |||| || |||||||||||||||||||| ||||| Sbjct: 279 cgttatggtctttcagtcctctacgtacgggaaggtgctcgtcctcgatgg 329 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 78 atggaggccgagacggcggccaagagggcgcgggagagcg 117 ||||| |||||| |||||||||||||| ||||||| |||| Sbjct: 103 atggaagccgaggcggcggccaagaggacgcgggacagcg 142
>ref|NM_187782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 161 bits (81), Expect = 2e-36 Identities = 211/254 (83%), Gaps = 9/254 (3%) Strand = Plus / Plus Query: 78 atggaggccgagacggcggccaagagggcgcgggagagcgatggcgctgcggcggcggcg 137 |||||||||||| ||||||| ||||||||||||||||||| || ||| |||||||| Sbjct: 1 atggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc---- 56 Query: 138 gacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgagatc 197 ||| |||| ||||||||||| ||||| ||||||||||| || |||||||||||||| Sbjct: 57 --cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgagatt 114 Query: 198 agccccatgtggcccggcgaggtacactcgctgaaggtggagaaggtcctgttcctaggc 257 |||||||||||||| |||| |||||| ||||||| || ||||| || |||| ||| Sbjct: 115 agccccatgtggcc---tgaggcacactcattgaaggtcgaaaaggtactattccaagga 171 Query: 258 aagtcagactaccaagatgtgctggttttccaggcctccacctacgggaaggtgctcgtc 317 ||||| ||||||||| ||||| |||| || ||| ||||||| ||||| |||||||| || Sbjct: 172 aagtcggactaccaaaatgtgatggtgtttcagtcctccacgtacggcaaggtgcttgtg 231 Query: 318 ctggatggggtgat 331 |||||||| ||||| Sbjct: 232 ctggatggagtgat 245
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 121 bits (61), Expect = 1e-24 Identities = 117/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 76 ggatggaggccgagacggcggccaagagggcgcgggagagcgatggcgctgcggcggcgg 135 |||||||||||||| ||||||| ||||||||||||||||||| || ||| |||||||| Sbjct: 12669008 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 12668951 Query: 136 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 195 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 12668950 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 12668895 Query: 196 tcagccccatgtggcc 211 | |||||||||||||| Sbjct: 12668894 ttagccccatgtggcc 12668879 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 28832178 gctgcggcggcggcggacgg 28832197 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgtgctctag 68 |||||||||||||||||||| Sbjct: 2103509 tcgtcgtcgtcgtgctctag 2103528
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 121 bits (61), Expect = 1e-24 Identities = 117/136 (86%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 76 ggatggaggccgagacggcggccaagagggcgcgggagagcgatggcgctgcggcggcgg 135 |||||||||||||| ||||||| ||||||||||||||||||| || ||| |||||||| Sbjct: 43478 ggatggaggccgaggcggcggcgaagagggcgcgggagagcggtgacgcggcggcggc-- 43421 Query: 136 cggacggagccgttgagcaggcggggatctccgccgtcatccccgggtggttctccgaga 195 ||| |||| ||||||||||| ||||| ||||||||||| || ||||||||||||| Sbjct: 43420 ----cggtgccggcgagcaggcgggtatctctgccgtcatccctggatggttctccgaga 43365 Query: 196 tcagccccatgtggcc 211 | |||||||||||||| Sbjct: 43364 ttagccccatgtggcc 43349
>dbj|AB015599.1| Coffea arabica mRNA for spermidine synthase, complete cds Length = 1383 Score = 50.1 bits (25), Expect = 0.005 Identities = 46/53 (86%) Strand = Plus / Plus Query: 183 tggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggt 235 ||||| || ||||||||||| |||||||| || |||| ||||||||| ||||| Sbjct: 113 tggttttctgagatcagcccaatgtggcctggagaggcacactcgctaaaggt 165
>emb|Y08253.1|DSSS2 D.stramonium mRNA for spermidine synthase 2 Length = 1217 Score = 48.1 bits (24), Expect = 0.018 Identities = 51/60 (85%) Strand = Plus / Plus Query: 183 tggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtggagaag 242 |||||||||||||| |||||| | ||||| || || | ||||||| ||||||| |||||| Sbjct: 129 tggttctccgagattagccccctctggcctggggaagcacactcgttgaaggttgagaag 188
>gb|AF298195.1|AF298195 Leishmania donovani spermidine synthase gene, complete cds Length = 903 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Plus Query: 202 ccatgtggcccggcgaggtacactcgctgaaggtggagaaggtcctgt 249 |||||||||||||| ||| ||| |||||||||||||||||| |||| Sbjct: 50 ccatgtggcccggccaggcacaggggctgaaggtggagaaggttctgt 97
>ref|XM_468128.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 gcggcggcggcggacggagccg 147 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>ref|XM_883450.1| Leishmania major strain Friedlin spermidine synthase (L3291.03) partial mRNA Length = 903 Score = 44.1 bits (22), Expect = 0.28 Identities = 40/46 (86%) Strand = Plus / Plus Query: 202 ccatgtggcccggcgaggtacactcgctgaaggtggagaaggtcct 247 |||||||||||||| ||| ||| ||| ||||||||||||||||| Sbjct: 50 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 95
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 44.1 bits (22), Expect = 0.28 Identities = 40/46 (86%) Strand = Plus / Minus Query: 202 ccatgtggcccggcgaggtacactcgctgaaggtggagaaggtcct 247 |||||||||||||| ||| ||| ||| ||||||||||||||||| Sbjct: 14639 ccatgtggcccggccaggcacaggggctcaaggtggagaaggtcct 14594
>emb|Z11920.1|OSHSP82A O.sativa gene for heat shock protein 82 HSP82 Length = 5310 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 atggcgctgcggcggcggcgga 139 |||||||||||||||||||||| Sbjct: 928 atggcgctgcggcggcggcgga 907
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 atggcgctgcggcggcggcgga 139 |||||||||||||||||||||| Sbjct: 24716200 atggcgctgcggcggcggcgga 24716221 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 17352738 gccgagctgacctcgtcgtcgtcgt 17352762 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 16466870 gccgagctgacctcgtcgtcgtcgt 16466894 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 13858545 gccgagctgacctcgtcgtcgtcgt 13858521
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 gcggcggcggcggacggagccg 147 |||||||||||||||||||||| Sbjct: 33241192 gcggcggcggcggacggagccg 33241171 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 10480124 gccgagctgacctcgtcgtcgtcgt 10480100
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 atggcgctgcggcggcggcgga 139 |||||||||||||||||||||| Sbjct: 17001 atggcgctgcggcggcggcgga 17022
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 118 atggcgctgcggcggcggcgga 139 |||||||||||||||||||||| Sbjct: 88504 atggcgctgcggcggcggcgga 88525
>dbj|AP004849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_D08 Length = 163702 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 gcggcggcggcggacggagccg 147 |||||||||||||||||||||| Sbjct: 70501 gcggcggcggcggacggagccg 70480
>dbj|AK105110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F08, full insert sequence Length = 1775 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 gcggcggcggcggacggagccg 147 |||||||||||||||||||||| Sbjct: 897 gcggcggcggcggacggagccg 918
>emb|AM177608.1| Calystegia sepium mRNA for putrescine N-methyltransferase (pmt gene) Length = 1035 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Plus Query: 180 gggtggttctccgagatcagccccatgtggcccggcga 217 |||||||| |||||| |||||| |||||||||||||| Sbjct: 172 gggtggttttccgagttcagccaaatgtggcccggcga 209
>ref|NM_197876.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0027L23.17), mRNA Length = 468 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gatggcgctgcggcggcggcg 137 ||||||||||||||||||||| Sbjct: 316 gatggcgctgcggcggcggcg 336
>ref|NM_195918.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNAb0078C13.2), mRNA Length = 4500 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 3026 gccgagctgacctcgtcgtcgtcgt 3002
>gb|BT018573.1| Zea mays clone EL01N0443D05.d mRNA sequence Length = 1450 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 tgcggcggcggcggacggagc 145 ||||||||||||||||||||| Sbjct: 458 tgcggcggcggcggacggagc 438
>emb|CR732816.1| Gallus gallus finished cDNA, clone ChEST742i24 Length = 1113 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ggtggagaaggtcctgttcct 253 ||||||||||||||||||||| Sbjct: 107 ggtggagaaggtcctgttcct 127
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 33009 gccgagctgacctcgtcgtcgtcgt 32985
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 agctcacctcgtcgtcgtcgt 61 ||||||||||||||||||||| Sbjct: 107117 agctcacctcgtcgtcgtcgt 107097
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 17705 gccgagctgacctcgtcgtcgtcgt 17729
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete sequence Length = 143961 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gatggcgctgcggcggcggcg 137 ||||||||||||||||||||| Sbjct: 67485 gatggcgctgcggcggcggcg 67505
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 agctcacctcgtcgtcgtcgt 61 ||||||||||||||||||||| Sbjct: 34489632 agctcacctcgtcgtcgtcgt 34489612
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 14686839 gccgagctgacctcgtcgtcgtcgt 14686863 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 22824741 gctgcggcggcggcggacgg 22824722
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gatggcgctgcggcggcggcg 137 ||||||||||||||||||||| Sbjct: 22415462 gatggcgctgcggcggcggcg 22415482 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 10000946 gccgagctgacctcgtcgtcgtcgt 10000970 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 acctcgtcgtcgtcgtgctc 65 |||||||||||||||||||| Sbjct: 15572358 acctcgtcgtcgtcgtgctc 15572377
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacctcgtcgtcgtcgtgctc 65 ||||||||||||||||||||| Sbjct: 18601313 cacctcgtcgtcgtcgtgctc 18601333
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 22564406 gccgagctgacctcgtcgtcgtcgt 22564430 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 gagagcgatggcgctgcggcggcggcgg 138 ||||||| ||||| |||||||||||||| Sbjct: 8716085 gagagcggtggcggtgcggcggcggcgg 8716058
>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1097D05 Length = 144879 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 80143 gccgagctgacctcgtcgtcgtcgt 80167
>dbj|AP004561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0465H09 Length = 148590 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 66264 gccgagctgacctcgtcgtcgtcgt 66240
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 122546 gccgagctgacctcgtcgtcgtcgt 122522
>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063E14 Length = 174415 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 61292 gccgagctgacctcgtcgtcgtcgt 61268
>dbj|AP005485.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_D12 Length = 105521 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 2940 gccgagctgacctcgtcgtcgtcgt 2916
>dbj|AP004647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1267_E11 Length = 117073 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 36362 gccgagctgacctcgtcgtcgtcgt 36386
>dbj|AP005523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0488B06 Length = 154764 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 77526 gccgagctgacctcgtcgtcgtcgt 77550
>dbj|AK105294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-G10, full insert sequence Length = 1721 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 cacctcgtcgtcgtcgtgctc 65 ||||||||||||||||||||| Sbjct: 614 cacctcgtcgtcgtcgtgctc 634
>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete sequence Length = 138387 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 agctcacctcgtcgtcgtcgt 61 ||||||||||||||||||||| Sbjct: 111159 agctcacctcgtcgtcgtcgt 111139
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete sequence Length = 104146 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 agctcacctcgtcgtcgtcgt 61 ||||||||||||||||||||| Sbjct: 21492 agctcacctcgtcgtcgtcgt 21472
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 117 gatggcgctgcggcggcggcg 137 ||||||||||||||||||||| Sbjct: 22427530 gatggcgctgcggcggcggcg 22427550 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 10006985 gccgagctgacctcgtcgtcgtcgt 10007009 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 acctcgtcgtcgtcgtgctc 65 |||||||||||||||||||| Sbjct: 15580599 acctcgtcgtcgtcgtgctc 15580618
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 14641122 gccgagctgacctcgtcgtcgtcgt 14641146 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 22752932 gctgcggcggcggcggacgg 22752913
>emb|AL954159.4|CNS08CCX Oryza sativa chromosome 12, . BAC OSJNBa0057C04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131673 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 57246 gccgagctgacctcgtcgtcgtcgt 57222
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 gccgagctcacctcgtcgtcgtcgt 61 |||||||| |||||||||||||||| Sbjct: 131960 gccgagctgacctcgtcgtcgtcgt 131936
>ref|NM_187942.1| Oryza sativa (japonica cultivar-group), Ozsa8362 predicted mRNA Length = 1782 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 gagagcgatggcgctgcggcggcggcgg 138 ||||||| ||||| |||||||||||||| Sbjct: 394 gagagcggtggcggtgcggcggcggcgg 421
>ref|NM_001003186.1| Canis familiaris nitric oxide synthase 2A (inducible, hepatocytes) (NOS2A), mRNA Length = 4050 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggttttccaggcctccacct 300 |||||||||||||||||||| Sbjct: 1572 ggttttccaggcctccacct 1553
>ref|XM_479552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 1076 gctgcggcggcggcggacgg 1095
>ref|XM_476597.1| Oryza sativa (japonica cultivar-group), mRNA Length = 231 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgtgctctag 68 |||||||||||||||||||| Sbjct: 189 tcgtcgtcgtcgtgctctag 208
>gb|AY023197.1| Oryza sativa microsatellite MRG5522 containing (GCG)X9, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 gagagcgatggcgctgcggcggcggcgg 138 ||||||| ||||| |||||||||||||| Sbjct: 86 gagagcggtggcggtgcggcggcggcgg 113
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 ccgagacggcggccaagagggcgc 108 ||||||||||||| |||||||||| Sbjct: 2661789 ccgagacggcggcgaagagggcgc 2661766
>ref|XM_417130.1| PREDICTED: Gallus gallus similar to Potential phospholipid-transporting ATPase IB (ATPase class I type 8A member 2) (ML-1) (LOC418936), mRNA Length = 8442 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 440 gctgcggcggcggcggacgg 421
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 ggcgctgcggcggcggcgga 139 |||||||||||||||||||| Sbjct: 27319 ggcgctgcggcggcggcgga 27338
>gb|AC138454.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019B24, complete sequence Length = 162385 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 156440 gctgcggcggcggcggacgg 156421
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcgatggcgctgcggcggcggcgg 138 |||||||||| ||||||||||||| Sbjct: 30618375 gcgatggcgcggcggcggcggcgg 30618352 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 14308968 cgccgtcatccccgggtggt 14308987
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gcgatggcgctgcggcggcggcgg 138 |||||||||| ||||||||||||| Sbjct: 144017 gcgatggcgcggcggcggcggcgg 144040
>gb|AF223942.1| Ovis aries inducible nitric oxide synthase mRNA, partial cds Length = 2838 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggttttccaggcctccacct 300 |||||||||||||||||||| Sbjct: 968 ggttttccaggcctccacct 949
>ref|XM_862775.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 6 (LOC612954), mRNA Length = 1720 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862768.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 5 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862760.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 4 (LOC612954), mRNA Length = 1786 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862752.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 3 (LOC612954), mRNA Length = 1846 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_862747.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 2 (LOC612954), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 46 gcgctgcggcggcggcggac 27
>ref|XM_848628.1| PREDICTED: Canis familiaris similar to Insulin gene enhancer protein ISL-1 (Islet-1), transcript variant 1 (LOC612954), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 63 gcgctgcggcggcggcggac 44
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cagccccatgtggcccggcg 216 |||||||||||||||||||| Sbjct: 2971054 cagccccatgtggcccggcg 2971035
>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence Length = 41295 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 agcaggcggggatctccgcc 170 |||||||||||||||||||| Sbjct: 7105 agcaggcggggatctccgcc 7086
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 agcaggcggggatctccgcc 170 |||||||||||||||||||| Sbjct: 24565 agcaggcggggatctccgcc 24546
>gb|AC171242.2| Gallus gallus BAC clone CH261-59O7 from chromosome ul, complete sequence Length = 191648 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 145649 gctgcggcggcggcggacgg 145668
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 58197 cgccgtcatccccgggtggt 58216
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 120356 cgccgtcatccccgggtggt 120375
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgctgcggcggcggcggacg 141 |||||||||||||||||||| Sbjct: 2153677 cgctgcggcggcggcggacg 2153658
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 1641904 gctgcggcggcggcggacgg 1641885
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cctcgtcgtcgtcgtgctct 66 |||||||||||||||||||| Sbjct: 1172898 cctcgtcgtcgtcgtgctct 1172917
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcgatggcgctgcggcggcggcgg 138 |||||||||| ||||||||||||| Sbjct: 30709797 gcgatggcgcggcggcggcggcgg 30709774 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 14303943 cgccgtcatccccgggtggt 14303962
>gb|AY027883.1| Equus caballus inducible nitric oxide synthase mRNA, complete cds Length = 3936 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggttttccaggcctccacct 300 |||||||||||||||||||| Sbjct: 1494 ggttttccaggcctccacct 1475
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 acctcgtcgtcgtcgtgctc 65 |||||||||||||||||||| Sbjct: 59724 acctcgtcgtcgtcgtgctc 59743
>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699D11 Length = 140825 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 gagagcgatggcgctgcggcggcggcgg 138 ||||||| ||||| |||||||||||||| Sbjct: 33542 gagagcggtggcggtgcggcggcggcgg 33515
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 98414 gctgcggcggcggcggacgg 98433
>gb|AF005842.1|AF005842 Rhodobacter sphaeroides C4-dicarboxylate binding-protein precursor (dctP), small integral membrane transport protein (dctQ) and large integral membrane transport protein (dctM) genes, complete cds Length = 3718 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 ccgagacggcggccaagagggcgc 108 ||||||||||||| |||||||||| Sbjct: 2223 ccgagacggcggcgaagagggcgc 2200
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 89864 gctgcggcggcggcggacgg 89883
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cctcgtcgtcgtcgtgctct 66 |||||||||||||||||||| Sbjct: 24851 cctcgtcgtcgtcgtgctct 24870
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgtgctctag 68 |||||||||||||||||||| Sbjct: 187806 tcgtcgtcgtcgtgctctag 187825
>emb|AL691421.9| Mouse DNA sequence from clone RP23-21A16 on chromosome X, complete sequence Length = 221461 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 aggttttggggatggaggccgaga 90 ||||||||||||||||||| |||| Sbjct: 34505 aggttttggggatggaggcagaga 34482
>dbj|AK120411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B13, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>emb|AJ238245.1|TTA238245 Triticum tauschii st2 gene, exons 1-13 Length = 5329 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 126 gcggcggcggcggacggagccgttgagc 153 ||||||||||||||||||| || ||||| Sbjct: 4885 gcggcggcggcggacggagacggtgagc 4858
>dbj|AK110457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-F05, full insert sequence Length = 3027 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gcgctgcggcggcggcggac 140 |||||||||||||||||||| Sbjct: 1680 gcgctgcggcggcggcggac 1661
>dbj|AK109712.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H03, full insert sequence Length = 2670 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cctcgtcgtcgtcgtgctct 66 |||||||||||||||||||| Sbjct: 1317 cctcgtcgtcgtcgtgctct 1336
>dbj|AK099751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B12, full insert sequence Length = 1422 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 1001 cgccgtcatccccgggtggt 1020
>dbj|AK067013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E22, full insert sequence Length = 1192 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 acctcgtcgtcgtcgtgctc 65 |||||||||||||||||||| Sbjct: 167 acctcgtcgtcgtcgtgctc 148
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tcgtcgtcgtcgtgctctag 68 |||||||||||||||||||| Sbjct: 59302 tcgtcgtcgtcgtgctctag 59321
>gb|AY106782.1| Zea mays PCO117134 mRNA sequence Length = 862 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 tgcggcggcggcggacggag 144 |||||||||||||||||||| Sbjct: 304 tgcggcggcggcggacggag 285
>tpe|BN000574.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx45 gene for class III peroxidase 45 precursor, exons 1-2 Length = 1091 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cgccgtcatccccgggtggt 186 |||||||||||||||||||| Sbjct: 968 cgccgtcatccccgggtggt 987
>gb|AF068682.1|AF068682 Canis familiaris inducible nitric oxide synthase mRNA, partial cds Length = 1946 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggttttccaggcctccacct 300 |||||||||||||||||||| Sbjct: 978 ggttttccaggcctccacct 959
>gb|AF077821.1|AF077821 Canis familiaris inducible nitric oxide synthase mRNA, complete cds Length = 4050 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggttttccaggcctccacct 300 |||||||||||||||||||| Sbjct: 1572 ggttttccaggcctccacct 1553
>dbj|AB100310.1| Petunia x hybrida spds mRNA for spermidine synthase, complete cds Length = 1249 Score = 40.1 bits (20), Expect = 4.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 183 tggttctccgagatcagccccatgtggcccggcgaggtacactcgctgaaggtggagaag 242 |||||||| ||||| |||||| | ||||| || || | |||||| |||||||||||||| Sbjct: 154 tggttctctgagattagccccctttggcctggggaagcacactcattgaaggtggagaag 213
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 gcggcggcggcggacggagccgtt 149 |||||||||||| ||||||||||| Sbjct: 691 gcggcggcggcgtacggagccgtt 714
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 1639625 gctgcggcggcggcggacgg 1639606
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gctgcggcggcggcggacgg 142 |||||||||||||||||||| Sbjct: 132103 gctgcggcggcggcggacgg 132122
>gb|AF032909.1|AF032909 Canis familiaris inducible nitric oxide synthase mRNA, partial cds Length = 1775 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggttttccaggcctccacct 300 |||||||||||||||||||| Sbjct: 1364 ggttttccaggcctccacct 1345 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,012,843 Number of Sequences: 3902068 Number of extensions: 3012843 Number of successful extensions: 94073 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89522 Number of HSP's gapped (non-prelim): 4548 length of query: 331 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 309 effective length of database: 17,147,199,772 effective search space: 5298484729548 effective search space used: 5298484729548 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)