Clone Information

BLAST Search Result

Clone Name	bart61f11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Y283_BACHD (Q9KG32) Hypothetical protein BH0283	83	2e-16
2	PHZ2_MOUSE (Q9DCG6) Probable oxidoreductase 0610038K03Rik	80	1e-15
3	ULA4_HUMAN (P30039) MAWD binding protein (Unknown protein 32 fro...	78	4e-15
4	PHZ1_MOUSE (Q9CXN7) Probable oxidoreductase 3110049J23Rik	74	6e-14
5	YX21_CAUCR (Q9A3I3) Hypothetical protein CC3221	72	4e-13
6	Y3578_PSEAE (Q9HY42) Hypothetical protein PA3578	70	1e-12
7	Y2770_PSEAE (Q9I073) Hypothetical protein PA2770	67	1e-11
8	YDDE_ECOLI (P37757) Protein yddE (ORFB)	57	8e-09
9	YDDE_ECO57 (P58292) Protein yddE	57	8e-09
10	PHZF_PSEAE (O69754) Phenazine/pyocyanine biosynthesis protein phzF	55	3e-08
11	PHZF_PSECL (Q51520) Phenazine biosynthesis protein phzF	54	1e-07
12	YDDE_SALTY (P40788) Protein yddE	52	3e-07
13	PHZF_PSEFL (Q51792) Phenazine biosynthesis protein phzF	51	6e-07
14	YFHB_BACSU (O31570) Hypothetical protein yfhB	49	4e-06
15	Y3446_CLOAB (P58293) Hypothetical protein CAC3446	48	6e-06
16	Y1019_SYNY3 (P73125) Hypothetical protein slr1019	45	3e-05
17	Y1950_BACHD (Q9KBH7) Hypothetical protein BH1950	44	9e-05
18	AES1_SCHPO (Q8NIL3) Antisense-enhancing sequence 1 (AES factor 1)	41	8e-04
19	YHI9_YEAST (P38765) Hypothetical 32.6 kDa protein in DAP2-SLT2 i...	39	0.002
20	Y1393_RHILO (Q98KN6) Hypothetical protein mll1393	39	0.002
21	Y1503_PASMU (Q9CKV2) Hypothetical protein PM1503	39	0.003
22	Y1330_DEIRA (Q9RUQ2) Hypothetical protein DR1330	39	0.003
23	NETR_SAGLB (Q5G265) Neurotrypsin precursor (EC 3.4.21.-)	36	0.025
24	Y3195_VIBCH (Q9KMG3) Hypothetical protein VCA0395	33	0.16
25	VINC_BRUMA (Q17162) Vinculin	30	1.1
26	GLMM_PSE14 (Q48E72) Phosphoglucosamine mutase (EC 5.4.2.10)	30	1.8
27	JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation...	30	1.8
28	TRFL_HORSE (O77811) Lactotransferrin precursor (EC 3.4.21.-) (La...	29	2.3
29	GLMM_PSEU2 (P95575) Phosphoglucosamine mutase (EC 5.4.2.10)	29	2.3
30	PK1IP_BOVIN (Q5EA99) p21-activated protein kinase-interacting pr...	29	2.3
31	RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/in...	29	2.3
32	YMP5_STRCO (P43169) Hypothetical protein in mprR 3'region (EC 1....	28	4.0
33	GLMM_PSESM (Q87WQ0) Phosphoglucosamine mutase (EC 5.4.2.10)	28	4.0
34	XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hy...	28	4.0
35	IF6_SULTO (Q971I4) Translation initiation factor 6 (aIF-6)	28	4.0
36	PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)	28	4.0
37	GLMM_PSEAE (Q9HV50) Phosphoglucosamine mutase (EC 5.4.2.10)	28	5.2
38	6PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxyl...	28	6.8
39	ACEK_ECO57 (Q8X607) Isocitrate dehydrogenase kinase/phosphatase ...	28	6.8
40	RW1_MOUSE (O70472) RW1 protein	28	6.8
41	PURL_STAAR (Q6GI15) Phosphoribosylformylglycinamidine synthase I...	28	6.8
42	SYNG_MOUSE (Q5SV85) AP1 gamma subunit-binding protein 1 (Gamma-s...	27	8.9
43	ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr...	27	8.9
44	FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chor...	27	8.9
45	ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop...	27	8.9
46	ATKC_XANAC (Q8PPC8) Potassium-transporting ATPase C chain (EC 3....	27	8.9
47	TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16	27	8.9
48	ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr...	27	8.9
49	RPOB_NITWN (Q3SSY0) DNA-directed RNA polymerase beta chain (EC 2...	27	8.9
50	PHF1_MOUSE (Q9Z1B8) PHD finger protein 1 (PHF1 protein) (T-compl...	27	8.9

>Y283_BACHD (Q9KG32) Hypothetical protein BH0283|
          Length = 265

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 48/90 (53%), Positives = 53/90 (58%)
 Frame = +2

Query: 101 VVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXX 280
           VVDAFT Q FKGNPAAVC L       + D  WMQ VA E NLS+T              
Sbjct: 8   VVDAFTNQAFKGNPAAVCVL-----PTSRDDIWMQHVASEMNLSETAFLHPYQDG----- 57

Query: 281 TPRFHLRWFTPVTEVALCGHATLATAHFLF 370
              + LRWFTP TEV LCGHATLA+AH L+
Sbjct: 58  ---YSLRWFTPNTEVDLCGHATLASAHILW 84

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>PHZ2_MOUSE (Q9DCG6) Probable oxidoreductase 0610038K03Rik|
          Length = 288

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 44/93 (47%), Positives = 52/93 (55%)
 Frame = +2

Query: 101 VVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXX 280
           + DAFTA  F+GNPAAVC L       A      Q +A E NLS+T              
Sbjct: 7   IADAFTATAFRGNPAAVCLLERTLEEDAH-----QQIAREMNLSETAFIRKLQPTDSFTQ 61

Query: 281 TPRFHLRWFTPVTEVALCGHATLATAHFLFTSV 379
           + RF LRWFTPV+EV LCGHATLA+A  LF  +
Sbjct: 62  SSRFGLRWFTPVSEVPLCGHATLASAAVLFHKI 94

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>ULA4_HUMAN (P30039) MAWD binding protein (Unknown protein 32 from 2D-page of|
           liver tissue)
          Length = 288

 Score = 78.2 bits (191), Expect = 4e-15
 Identities = 42/93 (45%), Positives = 53/93 (56%)
 Frame = +2

Query: 101 VVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXX 280
           + DAFTA+ F+GNPAAVC L ++      D    Q +A E NLS+T              
Sbjct: 7   IADAFTARAFRGNPAAVCLLENEL-----DEDMHQKIAREMNLSETAFIRKLHPTDNFAQ 61

Query: 281 TPRFHLRWFTPVTEVALCGHATLATAHFLFTSV 379
           +  F LRWFTP +EV LCGHATLA+A  LF  +
Sbjct: 62  SSCFGLRWFTPASEVPLCGHATLASAAVLFHKI 94

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>PHZ1_MOUSE (Q9CXN7) Probable oxidoreductase 3110049J23Rik|
          Length = 288

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 42/90 (46%), Positives = 48/90 (53%)
 Frame = +2

Query: 101 VVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXX 280
           + DAFTA  F+GNPAAVC L       A      Q +A E NLS+T              
Sbjct: 7   IADAFTATAFRGNPAAVCLLERTLDEDAH-----QDIAREMNLSETAFVRKLQPTDDFTQ 61

Query: 281 TPRFHLRWFTPVTEVALCGHATLATAHFLF 370
           + RF LRWFTP  E  LCGHATLA+A  LF
Sbjct: 62  SSRFGLRWFTPEAEFPLCGHATLASAAVLF 91

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>YX21_CAUCR (Q9A3I3) Hypothetical protein CC3221|
          Length = 275

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 41/89 (46%), Positives = 47/89 (52%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           +DAF   PF+GNPA V    D   A A    WMQ++A E N ++T               
Sbjct: 6   IDAFATGPFRGNPACVLEPFDVWPADA----WMQALAAENNQAETAYLLKTAD------P 55

Query: 284 PRFHLRWFTPVTEVALCGHATLATAHFLF 370
            RF LRWFTP  E  LCGHATLA AH LF
Sbjct: 56  DRFGLRWFTPTLEAPLCGHATLAAAHVLF 84

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>Y3578_PSEAE (Q9HY42) Hypothetical protein PA3578|
          Length = 261

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
 Frame = +2

Query: 89  IQYVVVDAFTAQPFKGNPAAV----CFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXX 256
           +++  VDAF+++PF GNPA V     +L D+          MQ +A E NLS+T      
Sbjct: 3   LEFHQVDAFSSRPFSGNPAVVYRLDAWLADEL---------MQMIATEHNLSETAFVVRE 53

Query: 257 XXXXXXXXTPRFHLRWFTPVTEVALCGHATLATAHFLF 370
                      + +RWFTP  EVALCGHATLA AH LF
Sbjct: 54  GEA--------WRIRWFTPSVEVALCGHATLAAAHVLF 83

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>Y2770_PSEAE (Q9I073) Hypothetical protein PA2770|
          Length = 259

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 43/88 (48%), Positives = 49/88 (55%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           VDAF   PF+GNPAAVC L  DA     D   +Q++A E NLS+T               
Sbjct: 8   VDAFADSPFQGNPAAVCPL--DAWL---DDERLQAIAEENNLSETAFVVGRDGD------ 56

Query: 284 PRFHLRWFTPVTEVALCGHATLATAHFL 367
             + LRWFTP  EV LCGHATLATA  L
Sbjct: 57  --YRLRWFTPQVEVDLCGHATLATAWVL 82

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>YDDE_ECOLI (P37757) Protein yddE (ORFB)|
          Length = 297

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 36/93 (38%), Positives = 48/93 (51%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           VDAFT+QPF+GN A V F  D+ +        MQ +A E   S+T               
Sbjct: 8   VDAFTSQPFRGNSAGVVFPADNLSEAQ-----MQLIARELGHSETAFLLHSDDSDV---- 58

Query: 284 PRFHLRWFTPVTEVALCGHATLATAHFLFTSVL 382
               +R+FTP  EV +CGHAT+A AH++   VL
Sbjct: 59  ---RIRYFTPTVEVPICGHATVA-AHYVRAKVL 87

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>YDDE_ECO57 (P58292) Protein yddE|
          Length = 297

 Score = 57.4 bits (137), Expect = 8e-09
 Identities = 36/93 (38%), Positives = 48/93 (51%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           VDAFT+QPF+GN A V F  D+ +        MQ +A E   S+T               
Sbjct: 8   VDAFTSQPFRGNSAGVVFPADNLSEAQ-----MQLIARELGHSETAFLLHSDDSDV---- 58

Query: 284 PRFHLRWFTPVTEVALCGHATLATAHFLFTSVL 382
               +R+FTP  EV +CGHAT+A AH++   VL
Sbjct: 59  ---RIRYFTPTVEVPICGHATVA-AHYVRAKVL 87

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>PHZF_PSEAE (O69754) Phenazine/pyocyanine biosynthesis protein phzF|
          Length = 278

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 34/89 (38%), Positives = 45/89 (50%)
 Frame = +2

Query: 92  QYVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXX 271
           +YVV+DAF ++P +GNP AV F  DD +     G  MQ +A E NLS++           
Sbjct: 3   RYVVIDAFASEPLQGNPVAVFFDCDDLS-----GERMQRMAREMNLSESTFVLRPQQDGD 57

Query: 272 XXXTPRFHLRWFTPVTEVALCGHATLATA 358
                   +R FTPV E+   GH  L TA
Sbjct: 58  A------RIRIFTPVNELPFAGHPLLGTA 80

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>PHZF_PSECL (Q51520) Phenazine biosynthesis protein phzF|
          Length = 278

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 33/88 (37%), Positives = 42/88 (47%)
 Frame = +2

Query: 95  YVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXX 274
           YV++DAF + P +GNP  V F  DD +A       MQ +A E NLS+T            
Sbjct: 4   YVIIDAFASAPLEGNPVTVFFDADDLSATQ-----MQRIAREMNLSETTFVLKPRNCGDA 58

Query: 275 XXTPRFHLRWFTPVTEVALCGHATLATA 358
                  +R FTPV E+   GH  L TA
Sbjct: 59  L------IRIFTPVNELPFAGHPLLGTA 80

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>YDDE_SALTY (P40788) Protein yddE|
          Length = 297

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 34/93 (36%), Positives = 45/93 (48%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           VDAFT  PF+GN A V    D  +        MQ +A E   S+T               
Sbjct: 8   VDAFTGDPFRGNSAGVVLHADTLSDAQ-----MQLIARELRHSETAFLLKSEESDV---- 58

Query: 284 PRFHLRWFTPVTEVALCGHATLATAHFLFTSVL 382
               +R+FTP  EV +CGHAT+A AH++  +VL
Sbjct: 59  ---RIRYFTPTVEVPICGHATVA-AHYVRATVL 87

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>PHZF_PSEFL (Q51792) Phenazine biosynthesis protein phzF|
          Length = 278

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 34/88 (38%), Positives = 43/88 (48%)
 Frame = +2

Query: 95  YVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXX 274
           YV++DAF + P +GNP AV F  DD   PA     MQ +A E NLS++            
Sbjct: 4   YVIIDAFASVPLEGNPVAVFFDADD-LPPA----QMQRIAREMNLSESTFVLKPRNGGDA 58

Query: 275 XXTPRFHLRWFTPVTEVALCGHATLATA 358
                  +R FTPV E+   GH  L TA
Sbjct: 59  L------IRIFTPVNELPFAGHPLLGTA 80

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>YFHB_BACSU (O31570) Hypothetical protein yfhB|
          Length = 293

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 34/103 (33%), Positives = 46/103 (44%)
 Frame = +2

Query: 83  KGIQYVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXX 262
           K  + +  +AFT+ P KGNPA V    DD          MQ +A     S+T        
Sbjct: 2   KEAEVLKYEAFTSSPGKGNPAGVVLQGDDYTEDE-----MQIIAERAGYSETSFIRKSES 56

Query: 263 XXXXXXTPRFHLRWFTPVTEVALCGHATLATAHFLFTSVLAES 391
                      LR+FTP  E+ LCGHAT+A+ + L    + ES
Sbjct: 57  AD-------LELRYFTPGHEMNLCGHATVASLYALCEKGMLES 92

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>Y3446_CLOAB (P58293) Hypothetical protein CAC3446|
          Length = 302

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 31/87 (35%), Positives = 42/87 (48%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           +D+FT + F GNPA V    D           MQ +A E N S+T               
Sbjct: 10  IDSFTKEKFTGNPAGVITNADGLTDYE-----MQKIARELNNSETAFIFSSKDERYDAW- 63

Query: 284 PRFHLRWFTPVTEVALCGHATLATAHF 364
               +R+FTP +EV +CGHAT+A AH+
Sbjct: 64  ----VRFFTPTSEVPICGHATIA-AHY 85

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>Y1019_SYNY3 (P73125) Hypothetical protein slr1019|
          Length = 306

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 33/91 (36%), Positives = 41/91 (45%)
 Frame = +2

Query: 95  YVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXX 274
           +  +D FT Q F GNP AV       A    DG+ MQ +A E N S+T            
Sbjct: 5   FYTLDVFTDQLFGGNPLAVF----PDAEGLTDGQ-MQKIAAEINYSETVFVLPPVTE--- 56

Query: 275 XXTPRFHLRWFTPVTEVALCGHATLATAHFL 367
             T  F LR FTP  E+   GH T+ T + L
Sbjct: 57  --TGNFRLRIFTPKRELDFAGHPTIGTTYLL 85

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>Y1950_BACHD (Q9KBH7) Hypothetical protein BH1950|
          Length = 295

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 30/92 (32%), Positives = 44/92 (47%)
 Frame = +2

Query: 107 DAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXTP 286
           +AF+  P KGNPA +  ++D       D    Q +A E   ++T                
Sbjct: 10  EAFSTVPSKGNPAGI--VLDGKGLTDSD---RQKIAKEVGFNETAFPLPSERADV----- 59

Query: 287 RFHLRWFTPVTEVALCGHATLATAHFLFTSVL 382
             ++R+FTP  E+ LCGHAT+AT + L T  L
Sbjct: 60  --NIRFFTPGHEINLCGHATMATIYALKTKGL 89

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>AES1_SCHPO (Q8NIL3) Antisense-enhancing sequence 1 (AES factor 1)|
          Length = 296

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 26/84 (30%), Positives = 40/84 (47%)
 Frame = +2

Query: 104 VDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXXXXXT 283
           +D F+ + F+GNP AV F  D+ +      + MQ +A   NLS+T               
Sbjct: 9   IDVFSNKGFRGNPVAVFFDADNLSQ-----KEMQQIAKWTNLSETTFVQKPTIDKAD--- 60

Query: 284 PRFHLRWFTPVTEVALCGHATLAT 355
             + LR FTP  E++  GH T+ +
Sbjct: 61  --YRLRIFTPECELSFAGHPTIGS 82

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>YHI9_YEAST (P38765) Hypothetical 32.6 kDa protein in DAP2-SLT2 intergenic|
           region
          Length = 294

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = +2

Query: 89  IQYVVVDAFTAQPFKGNPAAVC-FLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXX 265
           + +  VD FT +PF GNP AV  FL  D    + +   +Q++A   NLS+T         
Sbjct: 5   VPFKQVDVFTEKPFMGNPVAVINFLEIDENEVSQEE--LQAIANWTNLSETTFLFKPSDK 62

Query: 266 XXXXXTPRFHLRWFTPVTEVALCGHATLAT 355
                   + LR FTP +E+   GH T+ +
Sbjct: 63  KYD-----YKLRIFTPRSELPFAGHPTIGS 87

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>Y1393_RHILO (Q98KN6) Hypothetical protein mll1393|
          Length = 302

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +2

Query: 95  YVVVDAFTAQPFKGNPAAV---CFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXX 265
           Y++ D FT +   GNP AV   C  +D  A        MQ++A EFNLS+T         
Sbjct: 6   YLLYDVFTTERLAGNPLAVVLDCKGLDTIA--------MQAIAREFNLSETVFVLPPDNP 57

Query: 266 XXXXXTPRFHLRWFTPVTEVALCGHATLATA 358
                  +  +R FTP  E+   GH T+ +A
Sbjct: 58  KH-----KNRIRIFTPDYEMPFAGHPTVGSA 83

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>Y1503_PASMU (Q9CKV2) Hypothetical protein PM1503|
          Length = 289

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
 Frame = +2

Query: 95  YVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDG---RWMQSVAVEFNLSQTXXXXXXXXX 265
           Y +V+ F    F GNP AV         P  DG   + MQ +A +FNLS+T         
Sbjct: 7   YHLVNVFAETYFGGNPLAVF--------PQADGLTDQQMQLIARQFNLSETVFVHQTTES 58

Query: 266 XXXXXTPRFHLRWFTPVTEVALCGHATLATAHFL 367
                     LR FTP  E+   GH T+  A  L
Sbjct: 59  SAVRK-----LRIFTPDYELPFAGHPTIGAAFVL 87

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>Y1330_DEIRA (Q9RUQ2) Hypothetical protein DR1330|
          Length = 308

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 31/92 (33%), Positives = 39/92 (42%)
 Frame = +2

Query: 92  QYVVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLSQTXXXXXXXXXXX 271
           +Y  V AFT  P +GN A V   V DA    G+   MQ +A      +T           
Sbjct: 17  RYAEVAAFTTVPGQGNRAGV---VLDAGELTGEQ--MQRLAAFLEAPETVFVTRLSDGLG 71

Query: 272 XXXTPRFHLRWFTPVTEVALCGHATLATAHFL 367
                   +R+FTP  EV  CGHAT+A    L
Sbjct: 72  -------RVRYFTPTQEVDFCGHATVALGRVL 96

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>NETR_SAGLB (Q5G265) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 875

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = +1

Query: 199 DAVRRRRVQPLPDGLFFA*LVP-RGRRRHAAVPPPLVHPRHGGRAL-----RARDAGHRP 360
           D++  R     P GL +   +P   R R    PPPL       RAL      A  AGH P
Sbjct: 27  DSLHHRHRHSPPPGLLYPHYLPTEQRHRRTRPPPPLPRFPRPPRALPALRPHALQAGHTP 86

Query: 361 LPLHVR--PRGEPW 396
            P H R  P GEPW
Sbjct: 87  EP-HPRGCPAGEPW 99

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>Y3195_VIBCH (Q9KMG3) Hypothetical protein VCA0395|
          Length = 279

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 287 RFHLRWFTPVTEVALCGHATLATAHFLFTSVLAES 391
           RFH+RWF    E+ LCGH +L     + +    E+
Sbjct: 80  RFHIRWFALDGEINLCGHGSLGAGAAILSKYQLEN 114

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>VINC_BRUMA (Q17162) Vinculin|
          Length = 993

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 7/38 (18%)
 Frame = +1

Query: 271 RRRHAAVPPPL-------VHPRHGGRALRARDAGHRPL 363
           RR H+A+PP +       ++PRHGG A   RDA    L
Sbjct: 683 RRLHSAIPPMVNQAKQVALNPRHGGNAQSWRDANEHLL 720

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>GLMM_PSE14 (Q48E72) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 447

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = -2

Query: 226 VELDGDGLHP---PSVPRGGGRVVHQEAYRGRVALERLGRE 113
           V   G G+ P   PSV +   RV  Q A RGRV L + G E
Sbjct: 376 VRFAGSGVDPVSHPSVQQACARVTEQMAGRGRVLLRKSGTE 416

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>JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 1407

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = -3

Query: 336 PQSATSVTGVNQRRWNRGVAASAARDESREKKAVWERLNSTATDCIHRPSPAGAAASSTR 157
           P S  S       R +R ++ASA  D  R          ST TD   RPSPA   AS   
Sbjct: 30  PISPCSTADYRTYRASREISASATSDHVR----------STPTD--KRPSPADVPASHRS 77

Query: 156 KHTAAGLPLNGWA-VKASTTTYWIPFLDMPAKEQSSS 49
            H  +   ++  A +  +T+  + P    P  ++S++
Sbjct: 78  GHGRSSSTIDTLATIALATSPTFTPLTHRPPSDKSNT 114

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>TRFL_HORSE (O77811) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)|
           (Fragment)
          Length = 695

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3

Query: 222 NSTATDCIHRPSPAGAAASSTRKHTAAGLPLNGWAVKASTTT 97
           NS A DC+HRP P G  A +  + + A L  N  + K S  T
Sbjct: 425 NSNAPDCVHRP-PEGYLAVAVVRKSDADLTWNSLSGKKSCHT 465

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>GLMM_PSEU2 (P95575) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 447

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -2

Query: 226 VELDGDGLHP---PSVPRGGGRVVHQEAYRGRVALERLGRE 113
           V   G G+ P   PSV     RV  Q A RGRV L + G E
Sbjct: 376 VRFAGSGVDPVSHPSVKEACARVTEQMAGRGRVLLRKSGTE 416

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>PK1IP_BOVIN (Q5EA99) p21-activated protein kinase-interacting protein 1|
           (PAK1-interacting protein 1)
          Length = 392

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = -3

Query: 393 WLSARTDVKRKWAVASVACPQSATSVTGVNQRRWNRGVAASAARDESREKKAVWERLNST 214
           WL  RTD K     A+   P S        Q R N+  +  A ++E ++ K   E+ + T
Sbjct: 302 WLDRRTDTKESPPAAAEPAPVSK------EQSRRNKEESGHAVQEEEKQPKPDTEKCSLT 355

Query: 213 ATDCIHRPSPAGAAASSTRKHT 148
                ++P+   +  S+ ++ T
Sbjct: 356 GDS--NKPTRGNSLVSAKKRKT 375

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>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 980

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 354 VASVACPQSATSVTGVNQRRWNR-GVAASAARDESREKKAVWERLNSTATDCIHRPS 187
           V S +CPQS+    G      +  GV ASAA  +S    +  E L  T+ D   +PS
Sbjct: 513 VQSSSCPQSSPEFKGSQASLSDSLGVPASAADQDSYSTSSAEEELEFTSPDVEKKPS 569

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>YMP5_STRCO (P43169) Hypothetical protein in mprR 3'region (EC 1.-.-.-) (ORF5)|
           (Fragment)
          Length = 278

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 202 HPPSVPRGGGRVVHQEAYRGRVALERLGREGIH 104
           +PP+ PRG   +V+   + G     RLG  G+H
Sbjct: 95  NPPNWPRGQTALVYGTGHIGTAVASRLGAAGLH 127

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>GLMM_PSESM (Q87WQ0) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 447

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -2

Query: 226 VELDGDGLHP---PSVPRGGGRVVHQEAYRGRVALERLGRE 113
           V  +G  + P   PSV     RV  Q A RGRV L + G E
Sbjct: 376 VRFEGSSVDPVTHPSVQEACARVTEQMAGRGRVLLRKSGTE 416

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>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein|
           21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21)
          Length = 305

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/75 (21%), Positives = 30/75 (40%)
 Frame = -3

Query: 312 GVNQRRWNRGVAASAARDESREKKAVWERLNSTATDCIHRPSPAGAAASSTRKHTAAGLP 133
           G+ +  W++G   ++  + + E   VW  +N T T     P   G + SS+   T+    
Sbjct: 201 GLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTT---SPCSPGDSTSSSSSSTSEWFS 257

Query: 132 LNGWAVKASTTTYWI 88
             G    +     W+
Sbjct: 258 QRGMDSSSKKVLRWV 272

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>IF6_SULTO (Q971I4) Translation initiation factor 6 (aIF-6)|
          Length = 223

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 34  GTDRFGAALLFSGHVQERNPVCRGGCLHGPAV 129
           GT  FG+A + SG +  RN V  G    GP +
Sbjct: 183 GTVNFGSAFIHSGLIANRNGVLVGSATTGPEI 214

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>PDCD7_HUMAN (Q8N8D1) Programmed cell death protein 7 (ES18) (HES18)|
          Length = 485

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/35 (45%), Positives = 16/35 (45%)
 Frame = +1

Query: 292 PPPLVHPRHGGRALRARDAGHRPLPLHVRPRGEPW 396
           PPPL  P    R     DAG RP P    P G PW
Sbjct: 85  PPPLPPPPPQCRPFPGTDAGERPRPPPPGP-GPPW 118

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>GLMM_PSEAE (Q9HV50) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 445

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -2

Query: 217 DGDGLHPPSVPRGGGRVVHQEAYRGRVALERLGRE 113
           + D L  PSV     RV  Q   RGRV L + G E
Sbjct: 380 ENDPLEHPSVKEASVRVTEQMGGRGRVLLRKSGTE 414

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>6PGD_SYNP7 (P21577) 6-phosphogluconate dehydrogenase, decarboxylating (EC|
           1.1.1.44)
          Length = 471

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 98  VVVDAFTAQPFKGNPAAVCFLVDDAAAPAGDGRWMQSVAVEFNLS 232
           +  D FT     G    +  L+ DAA   G GRW    A+E  ++
Sbjct: 235 ITADIFTKVDDLGTGQPLVELILDAAGQKGTGRWTVETALEIGVA 279

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>ACEK_ECO57 (Q8X607) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)|
           (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P)
          Length = 578

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
 Frame = +1

Query: 232 PDGLFFA*LVPRGRRRHAAVPPPLV---HPRHGGRALRARDAGHRPLPLH 372
           P+ LF     P   RR   +P PL    HP HG  +L  R     PL LH
Sbjct: 118 PERLFIFSSQPE--RRFRTIPRPLAKDFHPDHGWESLLMRVISDLPLRLH 165

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>RW1_MOUSE (O70472) RW1 protein|
          Length = 1829

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
 Frame = -3

Query: 282  VAASAARDESREKKAVWERLNS--------TATDCIHRPSPAGAAASSTRKHTAAGLPLN 127
            V +  +R  S+  +  W   NS         ATD    PSP+  A+SS+  HTA  +  N
Sbjct: 1685 VFSKLSRSCSQSSQRSWNEFNSGPSYLWDSPATD----PSPSWPASSSSPTHTATSILGN 1740

Query: 126  G---WAVKASTTTYW 91
                W+    +++ W
Sbjct: 1741 SSGLWSTTPFSSSIW 1755

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>PURL_STAAR (Q6GI15) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 729

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -2

Query: 220 LDGDGLHPPSVPRGGGRVVHQEAYRGRVAL 131
           +DG+ L+  + P  GG++V  EAYR  +A+
Sbjct: 457 IDGEALYVYNNPYEGGKMVVAEAYRNLIAV 486

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>SYNG_MOUSE (Q5SV85) AP1 gamma subunit-binding protein 1 (Gamma-synergin)|
          Length = 1306

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -3

Query: 261 DESREKKAVWERLNSTATDCIHRPSPAGAAASS 163
           D S EK+  +    STA     RP PAG+AA+S
Sbjct: 618 DCSGEKQVPFSATFSTAKSVSTRPQPAGSAAAS 650

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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 310  PRHGGRALRARDAGHRPLPLH 372
            PRHGG AL+    G  P P H
Sbjct: 967  PRHGGLALQPGPPGLHPFPFH 987

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>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane|
            protein)
          Length = 2038

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 180  GAAASSTRKHTAAGLPLNGWAVKAST 103
            GA A     H  AG+P+ G AV AST
Sbjct: 1197 GAPAPGNMMHAGAGVPVAGAAVSAST 1222

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>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 310  PRHGGRALRARDAGHRPLPLH 372
            PRHGG AL+    G  P P H
Sbjct: 965  PRHGGLALQPGPPGLHPFPFH 985

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>ATKC_XANAC (Q8PPC8) Potassium-transporting ATPase C chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase C chain) (ATP
           phosphohydrolase [potassium-transporting] C chain)
           (Potassium-binding and translocating subunit C)
          Length = 206

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 27/94 (28%), Positives = 32/94 (34%), Gaps = 8/94 (8%)
 Frame = -3

Query: 342 ACPQSATSVTGVNQRRWNRGVAAS--------AARDESREKKAVWERLNSTATDCIHRPS 187
           A     T+  G NQ R N  + A         AARD    +    E L  + +      S
Sbjct: 76  AAKYDLTAAAGSNQARSNPDLLARIATTRAQVAARDGIAPEAVPGELLTQSGSGLDPHLS 135

Query: 186 PAGAAASSTRKHTAAGLPLNGWAVKASTTTYWIP 85
           PAGA     R   A G P    A     TT   P
Sbjct: 136 PAGAQVQIRRVAAARGWPEQRVAALVQATTEAAP 169

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>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16|
          Length = 767

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 310 PRHGGRALRARDAGHRPLPLHVRPRGEP 393
           PR  GR  R+  A H+P P  +RP   P
Sbjct: 109 PRPRGRRTRSSGASHQPSPTELRPTLTP 136

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>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 310  PRHGGRALRARDAGHRPLPLH 372
            PRHGG AL+    G  P P H
Sbjct: 968  PRHGGLALQPGPPGLHPFPFH 988

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>RPOB_NITWN (Q3SSY0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1380

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 38   QTDLELLCSLAGMSKKGIQYVVVDAFTAQPF 130
            + D+E +  LAGM K G Q  V D  T  PF
Sbjct: 1217 EADIEQMLELAGMDKSG-QSTVYDGRTGDPF 1246

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>PHF1_MOUSE (Q9Z1B8) PHD finger protein 1 (PHF1 protein) (T-complex|
           testis-expressed 3) (Polycomblike 1) (mPCl1)
          Length = 559

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
 Frame = +1

Query: 262 PRGRRRHAAV----PPPLVHPRHGGRALRARDAGHRPLP 366
           P  RR+   V    PP   H RHG R  RA  A   P P
Sbjct: 375 PLRRRQKGKVEELGPPTAAHSRHGSREQRALQASVSPPP 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,650,942
Number of Sequences: 219361
Number of extensions: 971422
Number of successful extensions: 3450
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 3312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3420
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result