ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG1_NEUCR (Q7RX99) Serine/threonine-protein kinase atg-1 (EC 2.... 29 5.7
2NPD_THET2 (Q72IV5) NAD-dependent deacetylase (EC 3.5.1.-) (Regul... 28 7.4

>ATG1_NEUCR (Q7RX99) Serine/threonine-protein kinase atg-1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 932

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +3

Query: 189 EDLAMSSSPNSNDSGKKNPLDAMGAFFSAQMNRRKLVTTQKLAMSERCT---SCGDEFPG 359
           ED     + ++NDS   N L  +G F S  ++  +L+  + + MS          ++ PG
Sbjct: 802 EDHPSHPNNHANDSTALNSLSTVGVFLSEGISAERLMYDRAIEMSRAAAINEIANEDLPG 861

Query: 360 C 362
           C
Sbjct: 862 C 862



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>NPD_THET2 (Q72IV5) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 254

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 12/59 (20%)
 Frame = +3

Query: 273 AQMNRRKLVTTQKLAMSERCTSCGDEFP------------GCAHRPADRKTWMSELGPD 413
           A+   + LV      +  RC +CG  FP             C HR      W  EL P+
Sbjct: 111 ARAGSQNLVELHGNLLRARCEACGKRFPLPEAFAPPPFCPACGHRARPDVVWFGELLPE 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,226,249
Number of Sequences: 219361
Number of extensions: 730737
Number of successful extensions: 2222
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2219
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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