Clone Information

BLAST Search Result

Clone Name	bart61f08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)	37	0.027
2	FER_THEMA (P46797) Ferredoxin	34	0.13
3	SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-as...	33	0.23
4	SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)	33	0.23
5	M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kin...	33	0.39
6	MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (P...	33	0.39
7	MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosi...	32	0.51
8	BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7	32	0.51
9	SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs...	32	0.67
10	FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leuc...	32	0.67
11	TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibr...	32	0.87
12	Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916	32	0.87
13	FER_THELI (P29604) Ferredoxin	32	0.87
14	TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibr...	32	0.87
15	FAS2_RHOFA (P46374) Ferredoxin fas2	32	0.87
16	MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-pro...	32	0.87
17	SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem...	31	1.1
18	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	31	1.1
19	IF2_PROMM (Q7V5M4) Translation initiation factor IF-2	31	1.1
20	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	31	1.1
21	VG03_ICHV1 (Q00115) Hypothetical gene 3 protein	31	1.5
22	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	31	1.5
23	PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)	31	1.5
24	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	31	1.5
25	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	31	1.5
26	BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 prec...	25	1.5
27	K1683_HUMAN (Q9H0B3) Protein KIAA1683	30	1.9
28	MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [C...	30	1.9
29	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	30	2.5
30	BAB2_DROME (Q9W0K4) Protein bric-a-brac 2	30	2.5
31	ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat prot...	30	2.5
32	WFDC5_HUMAN (Q8TCV5) WAP four-disulfide core domain protein 5 pr...	30	2.5
33	CSKI2_MOUSE (Q8VHK1) Caskin-2	30	2.5
34	PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase...	30	2.5
35	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	30	2.5
36	K2CA_BOVIN (P04263) Keratin, type II cytoskeletal 68 kDa, compon...	30	2.5
37	SAPS2_HUMAN (O75170) SAPS domain family member 2	30	3.3
38	ASCL2_RAT (P19360) Achaete-scute homolog 2	30	3.3
39	CUT2_CAEEL (P34682) Cuticlin-2 precursor	30	3.3
40	MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-pro...	30	3.3
41	VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)	29	4.3
42	MYCN_HUMAN (P04198) N-myc proto-oncogene protein	29	4.3
43	BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-assoc...	29	4.3
44	PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing pr...	29	4.3
45	MMPS3_MYCTU (P65378) Putative membrane protein mmpS3	29	4.3
46	MMPS3_MYCBO (P65379) Putative membrane protein mmpS3	29	4.3
47	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	29	4.3
48	SP5_MOUSE (Q9JHX2) Transcription factor Sp5	29	5.7
49	FER1_STRGO (P18324) Ferredoxin-1 (Fd-1)	29	5.7
50	VRP1_YEAST (P37370) Verprolin	29	5.7
51	ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (A...	29	5.7
52	ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 ...	29	5.7
53	UBR1_SCHPO (O60152) Ubiquitin-protein ligase E3 component N-reco...	29	5.7
54	SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)	29	5.7
55	PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)	29	5.7
56	IF2_DESPS (Q6AJY4) Translation initiation factor IF-2	29	5.7
57	GCSP_STRAW (Q827D7) Glycine dehydrogenase [decarboxylating] (EC ...	29	5.7
58	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	29	5.7
59	FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolas...	24	6.3
60	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	28	7.4
61	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	28	7.4
62	TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3...	28	7.4
63	FER_PYRAB (Q9UXY2) Ferredoxin	28	7.4
64	POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocaps...	28	7.4
65	ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disint...	28	7.4
66	RHG26_HUMAN (Q9UNA1) Rho-GTPase-activating protein 26 (Oligophre...	28	7.4
67	PERT_BORPE (P14283) Pertactin precursor (P.93) [Contains: Outer ...	28	7.4
68	CAPU_DROME (Q24120) Protein cappuccino	28	9.7
69	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	28	9.7
70	AROA_BRUSU (Q8G3C4) 3-phosphoshikimate 1-carboxyvinyltransferase...	28	9.7
71	AROA_BRUAB (P0C100) 3-phosphoshikimate 1-carboxyvinyltransferase...	28	9.7
72	AROA_BRUA2 (Q2YPN6) 3-phosphoshikimate 1-carboxyvinyltransferase...	28	9.7
73	ADCY1_HUMAN (Q08828) Adenylate cyclase type 1 (EC 4.6.1.1) (Aden...	28	9.7
74	TIG_RHIME (Q92Q12) Trigger factor (TF)	28	9.7
75	CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)	28	9.7
76	MI43_MYCIT (Q03490) 27 kDa lipoprotein antigen precursor (Mi43 a...	28	9.7
77	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	28	9.7
78	PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor	28	9.7
79	UPP_ANASP (Q8YVB5) Uracil phosphoribosyltransferase (EC 2.4.2.9)...	28	9.7
80	CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associate...	28	9.7
81	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	28	9.7
82	HXA2_CHICK (Q08727) Homeobox protein Hox-A2	28	9.7

>FER1_DESDN (P07485) Ferredoxin-1 (Ferredoxin I) (FdI)|
          Length = 59

 Score = 36.6 bits (83), Expect = 0.027
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 252 VDHR-CIDCATCRWMAPEVFKRVDG-QSAVAAQPTSEETRTKALQALLSCPTSSI 410
           +DH  CI C +C  + PEVF  +DG + A+   P S  T   A  A+ +CP  +I
Sbjct: 4   IDHEECIGCESCVELCPEVFAMIDGEEKAMVTAPDS--TAECAQDAIDACPVEAI 56

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>FER_THEMA (P46797) Ferredoxin|
          Length = 60

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +3

Query: 264 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSIHTDK 422
           CI C  C  + P+VF+  D   A   QP ++    K   A  SCPT +I  ++
Sbjct: 10  CIGCGVCENLCPDVFQLGDDGKAKVLQPETDLPCAK--DAADSCPTGAISVEE 60

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>SF3A1_HUMAN (Q15459) Splicing factor 3 subunit 1 (Spliceosome-associated|
           protein 114) (SAP 114) (SF3a120)
          Length = 793

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +1

Query: 43  HRRSALETEDFTRQS--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 213
           H+   L  ED T++   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 530 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTT 589

Query: 214 AGGARRTCP 240
              A    P
Sbjct: 590 VVSAVPVMP 598

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>SF3A1_MOUSE (Q8K4Z5) Splicing factor 3 subunit 1 (SF3a120)|
          Length = 791

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
 Frame = +1

Query: 43  HRRSALETEDFTRQS--PWRSTFAPPHPSPPRRLTCVRADAPPL-SLWSTPLCPLPRRST 213
           H+   L  ED T++   P +    P  P PP   T + + APP+ S+   P  P P R+T
Sbjct: 528 HKAKGLVPEDDTKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTT 587

Query: 214 AGGARRTCP 240
              A    P
Sbjct: 588 VVSAVPVMP 596

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>M3K14_HUMAN (Q99558) Mitogen-activated protein kinase kinase kinase 14 (EC|
           2.7.11.25) (NF-kappa beta-inducing kinase)
           (Serine/threonine-protein kinase NIK) (HsNIK)
          Length = 947

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
 Frame = +1

Query: 10  HKLSSARLGSSHRRSALETEDFTRQSPWRSTFAPP-HPSPPRRLTCVRADAPPLSLWSTP 186
           H++S+A LG    R+  +      +SPWR  +  P HP P +        A P  L    
Sbjct: 640 HRVSAAELGGKVNRALQQVGGL--KSPWRGEYKEPRHPPPNQANYHQTLHAQPRELSPRA 697

Query: 187 LCPLPRRSTAGGARRTCPATSSSITGASTVPP 282
             P P   T G A +  P         +  PP
Sbjct: 698 PGPRPAEETTGRAPKLQPPLPPEPPEPNKSPP 729

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>MPIP_DROME (P20483) M-phase inducer phosphatase (EC 3.1.3.48) (Protein string)|
           (Cdc25-like protein)
          Length = 479

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 27/101 (26%), Positives = 39/101 (38%)
 Frame = +1

Query: 4   KAHKLSSARLGSSHRRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWST 183
           K    + +  G S RR ++       +S   ST  PP  +P     C +   PP S   +
Sbjct: 158 KEQPAAKSPAGLSMRRPSVRRCLSMTESNTNSTTTPPPKTPETARDCFKRPEPPASANCS 217

Query: 184 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWLRRC 306
           P+    R   A   +  CPA S       + PP    LR+C
Sbjct: 218 PI-QSKRHRCAAVEKENCPAPSPLSQVTISHPPP---LRKC 254

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>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3530

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/70 (32%), Positives = 31/70 (44%)
 Frame = +1

Query: 85  SPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 264
           S W +  +PP   PPR  +     APPLS     L  LPR ++  G+ R  P   ++   
Sbjct: 655 SHWSALLSPP--VPPRPPSSGPPPAPPLS---PALSGLPRPASPYGSLRRHPPPWAAPAH 709

Query: 265 ASTVPPAGGW 294
               P A GW
Sbjct: 710 VPPAPQASGW 719

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>BTBD7_HUMAN (Q9P203) BTB/POZ domain-containing protein 7|
          Length = 1132

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +1

Query: 82  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 261
           Q P RS   P + S     T  +A  PP+ L S    P    STAG  R+T  A +++ T
Sbjct: 787 QHPSRSFSYPCNHSLFHSRTAPKAGPPPVYLPSVKAAPPDCTSTAGLGRQTVAAAAATTT 846

Query: 262 GASTVPPA 285
             +T   A
Sbjct: 847 STATAAAA 854

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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -3

Query: 299 RSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGG 159
           R   P+  +V  P + EE  G     PP    RGRG    +  D GG
Sbjct: 687 RKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGG 733

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>FXL19_HUMAN (Q6PCT2) F-box/LRR-repeat protein 19 (F-box and leucine-rich repeat|
           protein 19)
          Length = 674

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 18/101 (17%)
 Frame = +1

Query: 34  GSSHRRSALETEDFTRQSPWRSTFAPPHPS-PPRRLTCVRADAPPLSLWSTPL------- 189
           G   RR+    E  +  S W+ T  PP P  PPRR   + A  PP  +   P        
Sbjct: 141 GPGRRRADNGEEGASLGSGWKLTEEPPLPPPPPRRKGPLPAGPPPEDVPGPPKRKEREAG 200

Query: 190 --CPLPRRSTAGGARR--------TCPATSSSITGASTVPP 282
              P PR+   GG  R         C    S   G   +PP
Sbjct: 201 NEPPTPRKKVKGGRERHLKKVGGDACLLRGSDPGGPGLLPP 241

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>TAU_PAPHA (Q9MYX8) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 382

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 278 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 102
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 48  GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 104

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>Y2850_MYCTU (O05809) Hypothetical protein Rv2850c/MT2916|
          Length = 629

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
 Frame = +1

Query: 109 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRST-AGGARRTCPATSSSITGASTV--P 279
           PP P+ PR  +  R  APP  ++ T    +P   T A G R      S S+  A+ V  P
Sbjct: 349 PPRPASPRLRSSPRPSAPPSKIFRTRALRVPGVGTGAPGRRSRARNASGSVVAAAEVSDP 408

Query: 280 PAGG 291
            A G
Sbjct: 409 DAHG 412

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>FER_THELI (P29604) Ferredoxin|
          Length = 59

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 264 CIDCATCRWMAPEVFKRVDGQSAVAAQPTSEETRTKALQALLSCPTSSI 410
           CI C  C  + P+VF+  D   A A    +E     A +A  SCPT +I
Sbjct: 10  CIGCGVCASICPDVFEMDDDGKAKAL--VAETDLECAKEAAESCPTGAI 56

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>TAU_MACMU (P57786) Microtubule-associated protein tau (Neurofibrillary tangle|
           protein) (Paired helical filament-tau) (PHF-tau)
          Length = 458

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -3

Query: 278 GTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAK 102
           G  D P +++E AGHV +A   +  + +  +G D +   GA  +T+++   G    G K
Sbjct: 106 GIGDTPSLEDEAAGHVTQA--RMVSKSKDGTGSDDKKAKGADGKTKIATPRGAAPPGQK 162

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>FAS2_RHOFA (P46374) Ferredoxin fas2|
          Length = 304

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 255 DHRCIDCATCRWMAPEVFKRV-DGQSAVAAQPTSEETRTKALQALLSCPTSSIHTDKPA 428
           + RC     C  +APEVF++  DG   +     S +  +    A  SCP ++I  ++ A
Sbjct: 7   ERRCFGSGQCVLVAPEVFEQSNDGTVTLLVDKPSPDNHSLVRAAARSCPATAIRFEENA 65

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>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1798

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 26/89 (29%), Positives = 34/89 (38%), Gaps = 10/89 (11%)
 Frame = -3

Query: 290  PPAGGTVDAPV----------IDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQ 141
            PP+G  V  PV          +DEE  G    + PA+E RGRG S +       A +   
Sbjct: 963  PPSGEGVSGPVTEHSGEQRPKLDEEAVGRSSGSSPAMETRGRGTSQLAEGATAKAISDLA 1022

Query: 140  VSRRGGEGCGGAKVERHGD*RVKSSVSSA 54
            V R       G   E+     V   + SA
Sbjct: 1023 VRRARHRLLSGDSTEKRTARPVNKVIKSA 1051

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>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/100 (30%), Positives = 36/100 (36%), Gaps = 6/100 (6%)
 Frame = +1

Query: 10   HKLSSARLGSSHRRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP- 186
            H     R GS    SA  T       P  S F    P P   +  +R D PP    + P 
Sbjct: 777  HGPQPPRKGSEPLASAPFTSRPPASEPGASLFVDSSPMPRDGVPPLRLDVPPEGKRAAPS 836

Query: 187  -----LCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 291
                   P PR    GG+RR    T  +  G  T  P+GG
Sbjct: 837  GRPALSAPAPRLG-VGGSRRLPFPTHRAPPGLLTRVPSGG 875

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 88  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 267
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPPSMAGS 366

Query: 268 STVPP 282
           +  PP
Sbjct: 367 TAPPP 371

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>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2|
          Length = 1125

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +1

Query: 85  SPWR-STFAPPHPSPPRRL---TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSS 252
           SP R ST +  HP+PP R    T     +PP +       P+ R +    +R T P   S
Sbjct: 115 SPARPSTESVAHPAPPTRPANPTPTPTSSPPKTAARPINAPISRPAIP--SRPTAPTPRS 172

Query: 253 SITGASTVPP-AGGWLRRCSRESTAS 327
           +   +S VPP AGG   R  + ST S
Sbjct: 173 ANKPSSPVPPSAGGKDPRAGQTSTTS 198

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 88  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 267
           P R+  A P P PP R        PP  ++  PL  LP  + +G      P    S++G+
Sbjct: 314 PSRAPTAAPPPPPPSRPGVGAPPPPPNRMYPPPLPALPSSAPSGPPP---PPPPLSVSGS 370

Query: 268 STVPP 282
              PP
Sbjct: 371 VAPPP 375

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>VG03_ICHV1 (Q00115) Hypothetical gene 3 protein|
          Length = 302

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 109 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 261
           PP PSP    TC    + P SL S+P+ P P  S    A    P+ +  IT
Sbjct: 182 PPPPSPSDDTTC-EIPSLPSSLVSSPVNPAPMYSPVSDAPLNTPSPNMMIT 231

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
 Frame = +1

Query: 37  SSHRRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP------LCPL 198
           S  RRS        R+SP  +   PP P PPRR    R    P     TP        P 
Sbjct: 556 SRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRR----RRSPTPPPRRRTPSPPPRRRSPS 611

Query: 199 PRRSTAGGARRTCPATSSSITGASTVPP 282
           PRR +    RR  P+       AS  PP
Sbjct: 612 PRRYSPPIQRRYSPSPPPKRRTASPPPP 639

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>PGK_BRAJA (Q89U95) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 398

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 26/76 (34%), Positives = 36/76 (47%)
 Frame = -1

Query: 409 IEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHLQVAQSMHR*STKKSPDTF 230
           I DVG +S A      V + +  AAT  W   L    GA  +Q        + K + +  
Sbjct: 293 ILDVGPQSVA-----RVHAAIDDAATLVWNGPL----GAFEMQPFDRGTVAAAKHAAERT 343

Query: 229 CGRRLLSSAGGGDTVA 182
             ++L+S AGGGDTVA
Sbjct: 344 KAKKLISIAGGGDTVA 359

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +1

Query: 88  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 267
           P R+  A P P PP R   V    PP  ++  P   LP  + +G      P    S+ G+
Sbjct: 311 PSRAPTAAPPPPPPSRPGVVVPPPPPNRMYPPPPPALPSSAPSGPP----PPPPLSMAGS 366

Query: 268 STVPP 282
           +  PP
Sbjct: 367 TAPPP 371

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
 Frame = +1

Query: 16  LSSARLGSSHRRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLS--LWSTPL 189
           +SS    S  R   L +  F    P   T  PP P PPR  +   + +P  S  +   P 
Sbjct: 309 VSSGLPESGTRSPGLLSPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRSPCVPPAPE 368

Query: 190 CPLPRRSTAGGARRTCPA----TSSSITGASTVP 279
             LPR  T G     CP+    T  S    +T P
Sbjct: 369 VALPRPVTQGAGPGKCPSPNLQTQESPVATATSP 402

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>BAI2_HUMAN (O60241) Brain-specific angiogenesis inhibitor 2 precursor|
          Length = 1572

 Score = 24.6 bits (52), Expect(2) = 1.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 194  PSPGARQQAAPAERVRRLLRRSP 262
            P+P ARQ   P ER R + R  P
Sbjct: 1416 PTPSARQVPEPGERSRTMPRTVP 1438



 Score = 24.6 bits (52), Expect(2) = 1.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 82   QSPWRSTFAPPHPSPPRR 135
            Q+P+  TF PP P+P  R
Sbjct: 1404 QNPYGMTFQPPPPTPSAR 1421

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>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 14/63 (22%)
 Frame = +1

Query: 100 TFAPPHPSPPRRLTCVRADA-----PPLSLWSTPLCPLPRR---------STAGGARRTC 237
           T  PP  SP  ++T ++  A     P ++  +   CP+P           S  G  R+TC
Sbjct: 360 TTTPPKTSPVPKVTIIKTPAQMYPGPTVTKTAPHTCPMPTMTKIQVHPTASRTGTPRQTC 419

Query: 238 PAT 246
           PAT
Sbjct: 420 PAT 422

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>MAP1A_RAT (P34926) Microtubule-associated protein 1A (MAP 1A) [Contains: MAP1|
            light chain LC2]
          Length = 2774

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = +1

Query: 112  PHPSPPRRLTCVRADAPPLSLWSTPLCPL-----PRRSTAGGARRTCPATSSSITGASTV 276
            P PSPPR   C+ AD   LS  S  +  L     P R   G A+   PA    I G  + 
Sbjct: 2543 PRPSPPRPDVCM-ADPEGLSSESGRVERLREKGRPGRRAPGRAKPASPARRLDIRGKRSP 2601

Query: 277  PPAGGWLRRCSR 312
             P  G + R SR
Sbjct: 2602 TPGKGPVDRTSR 2613

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +1

Query: 79  RQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAG----GARRTCPAT 246
           R+SP       P P P RR    R  +PP+    +P  P P+R TA       RR  P+ 
Sbjct: 564 RRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSP-SPPPKRRTASPPPPPKRRASPSP 622

Query: 247 SSSITGASTVPP 282
            S    + + PP
Sbjct: 623 QSKRRVSHSPPP 634

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>BAB2_DROME (Q9W0K4) Protein bric-a-brac 2|
          Length = 1067

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = -3

Query: 236 HVLRAPPAVERRGRGHSGVDHRDRG---GASARTQVSRRGGEGCGGAKVERHGD*RVKSS 66
           H + +  A    G G +G      G   GASA T  +   G G G A    H D  +K  
Sbjct: 511 HAMASALAAAAAGAGAAGAGGAGSGSGSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKPE 570

Query: 65  VSSALRL*DEPRRAEL 18
           ++  +R   E  RA++
Sbjct: 571 IAEMIR---EEERAKM 583

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>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E]
          Length = 667

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 23/70 (32%), Positives = 29/70 (41%)
 Frame = +1

Query: 82  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT 261
           Q P R++ A P P PPR       +APP SL  +        STA       P    +I 
Sbjct: 274 QGPPRTSLALPPPLPPR-------EAPPPSLPDS-------NSTALATSAQTPTVRKTIV 319

Query: 262 GASTVPPAGG 291
             +T PP  G
Sbjct: 320 TLNTPPPTTG 329

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>WFDC5_HUMAN (Q8TCV5) WAP four-disulfide core domain protein 5 precursor|
           (Putative protease inhibitor WAP1)
          Length = 224

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 182 RHCVPSPGARQQAAPAERVRRLLRRSPVHRLCHLQVDGSG 301
           R CVP    +  + P +++R L   SP++ LCH   D SG
Sbjct: 68  RQCVPRVSVKLGSCPEDQLRCL---SPMNHLCHKDSDCSG 104

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>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
 Frame = +1

Query: 76   TRQSPWRSTFA------PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTC 237
            TR +P   +FA       P P PP+RL+ V     P SL  T     P+    G  RRT 
Sbjct: 847  TRGTPRSQSFALRARRKGPPPPPPKRLSSVSGSTEPPSLDGT---SGPKEGATGPRRRTL 903

Query: 238  PATSSSITGASTVP 279
                S  TG S  P
Sbjct: 904  ----SEPTGPSESP 913

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>PABT_STRGR (P33586) Probable cadicidin biosynthesis thioesterase (EC 3.1.2.-)|
           (Protein X) (ORF-1)
          Length = 361

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 261 RCIDCATCRWMAPEVFKRVDGQSAV--AAQPTSEETRTKALQALLS-CPTSSIHTDKPA 428
           +C+    C   APEVF + D    V   A PTS  TR  A +A  +  P SS    +PA
Sbjct: 9   QCVGAGQCVLNAPEVFDQDDDGVVVLLRADPTSGTTRRSARRATCARRPRSSSRRTEPA 67

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>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 22/82 (26%), Positives = 31/82 (37%)
 Frame = +1

Query: 46   RRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA 225
            ++ + +T +  R  P R    P  P+PP+R        PP    S    P P R      
Sbjct: 1096 QKDSSQTLEPKRPPPPRPVAPPARPAPPQR------PPPP----SGARSPAPARERVWST 1145

Query: 226  RRTCPATSSSITGASTVPPAGG 291
            R+          G S +PP GG
Sbjct: 1146 RKAQERPRRDNLGGSQLPPQGG 1167

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>K2CA_BOVIN (P04263) Keratin, type II cytoskeletal 68 kDa, component IA|
           (Fragment)
          Length = 182

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -3

Query: 206 RRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGD*RVKSSVSSALR 48
           R  RG+  +D    GG++ R  VS  GG  C  + V   G  RV  S S + R
Sbjct: 126 RASRGNLALDSSSGGGSAVRGSVSNSGG-SCAVSGVGGRGSVRVTQSSSQSQR 177

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>SAPS2_HUMAN (O75170) SAPS domain family member 2|
          Length = 927

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
 Frame = +1

Query: 22   SARLGSSHR----RSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPL 189
            S+  G SH     + A    D   + P R   APP P+  R    V       S   +P 
Sbjct: 789  SSSSGGSHSEDGDQKAASAMDAVSRGPGRE--APPLPTVARTEEAVGRVGCADSRLLSPA 846

Query: 190  CPLPRRSTAGGARRTCPATSSSITGA 267
            CP P+  TA  A    P  + +IT A
Sbjct: 847  CPAPKEVTAAPAVAVPPEATVAITTA 872

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>ASCL2_RAT (P19360) Achaete-scute homolog 2|
          Length = 260

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = +1

Query: 109 PPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTA---GGARRTCPATSSSITGASTV- 276
           PPHP P    +C    AP       P+   P  + +   GGA      TSS + GA T  
Sbjct: 41  PPHPVPREHFSC---GAP------KPVAGAPALNASLMDGGALPRLVPTSSGVAGACTAR 91

Query: 277 -PPAGGWLRRCSR 312
             P    L RCSR
Sbjct: 92  RRPPSPELLRCSR 104

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>CUT2_CAEEL (P34682) Cuticlin-2 precursor|
          Length = 231

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
 Frame = +1

Query: 106 APPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSIT----GAST 273
           APP P PP    C     PPL L    L  L   S  GG     P  ++ I     G +T
Sbjct: 30  APPPPPPP--CGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAPCAAAPIAAPAGGYAT 87

Query: 274 VP--PAGGW 294
            P  P GG+
Sbjct: 88  APAAPVGGY 96

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>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1734

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
 Frame = -3

Query: 290  PPAGGTVDAPV----------IDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQ 141
            PP+G     PV          +DEE  G   R  PA+E RGRG   +       A +   
Sbjct: 901  PPSGEGSSRPVPERPLERQLKLDEEPPGQSSRCCPALETRGRGTPQLAEEATAKAISDLA 960

Query: 140  VSRRGGEGCGGAKVERHGD*RVKSSVSSA 54
            V R       G  +E+     V   + SA
Sbjct: 961  VRRARHRLLSGDSIEKRTTRPVNKVIKSA 989

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>VASP_HUMAN (P50552) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 379

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 2/75 (2%)
 Frame = +1

Query: 109 PPHPSPPRRL--TCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPP 282
           PP P PP  L  + V A A        P  PLP     GG     P  +++I GA     
Sbjct: 178 PPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLAAAIAGAK---- 233

Query: 283 AGGWLRRCSRESTAS 327
               LR+ S++  AS
Sbjct: 234 ----LRKVSKQEEAS 244

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>MYCN_HUMAN (P04198) N-myc proto-oncogene protein|
          Length = 464

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 22/66 (33%), Positives = 29/66 (43%)
 Frame = -3

Query: 317 DSLEHLRSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERRGRGHSGVDHRDRGGASARTQV 138
           + L+H R  P AG T  +P      AG    A PA    GRGH G     R GA+   ++
Sbjct: 132 EKLQHGRGPPTAGSTAQSPG-----AG---AASPA----GRGHGGAAGAGRAGAALPAEL 179

Query: 137 SRRGGE 120
           +    E
Sbjct: 180 AHPAAE 185

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>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2160

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +1

Query: 46   RRSALETEDFTRQSPWRSTFAPPHP-SPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGG 222
            R S  ET    R    R    P  P +PPRR   ++   PP  +   P  PL +      
Sbjct: 921  RESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPK 980

Query: 223  ARRTCP--ATSSSITGASTVPPAG 288
            A +  P       + G    PP G
Sbjct: 981  APKPDPLKIAKGKLAGPKETPPNG 1004

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>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1687

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 291
           P  PLP R+   G RR   A   +  GA+ VP AGG
Sbjct: 59  PPGPLPGRAGGTGRRRRRGAPQPAAGGAAPVPAAGG 94

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>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +1

Query: 100 TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 264
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

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>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +1

Query: 100 TFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITG 264
           T  PP P PP   T     APP +  +T   P P  +T  G R+     + S+TG
Sbjct: 175 TVTPPPPPPPATTT-----APPPATTTTAAAPPPTTTTPTGPRQ----VTYSVTG 220

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +1

Query: 88  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGA 267
           P R+  A P P PP R +      PP  ++  P   LP  + +G      P    S+ G 
Sbjct: 314 PSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGP-----PPPPPSVLGV 368

Query: 268 STVPP 282
             V P
Sbjct: 369 GPVAP 373

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>SP5_MOUSE (Q9JHX2) Transcription factor Sp5|
          Length = 398

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
 Frame = +1

Query: 88  PWRSTFAPPHPSPPRRLTCVRADAPP----LSLWSTPLCPLPRRSTAGGARRTCPATSSS 255
           P  S   PP P PP   TC +    P    L  WS P      +S AG      P T  S
Sbjct: 157 PGYSNLLPPPPPPPPPPTCRQLSPAPAPDDLPWWSIP------QSGAGPGSSGVPGT--S 208

Query: 256 ITGASTVPP 282
           ++ A   PP
Sbjct: 209 LSSACAGPP 217

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>FER1_STRGO (P18324) Ferredoxin-1 (Fd-1)|
          Length = 68

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 264 CIDCATCRWMAPEVFKRVDGQ--SAVAAQPTSEETRTKALQALLSCPTSSI 410
           C+    C   AP VF + D    + + A+P +++ R  A +A   CP+ ++
Sbjct: 11  CVGAGLCALTAPGVFDQDDDGIVTVLTAEPAADDDRRTAREAGHLCPSGAV 61

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>VRP1_YEAST (P37370) Verprolin|
          Length = 817

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 17/85 (20%)
 Frame = +1

Query: 79  RQSPWRSTFAPPHPS----PPRRLTCVRADAPP-------------LSLWSTPLCPLPRR 207
           + +P   T APP P+    PP + + + A  PP             LS  S PL PLP  
Sbjct: 369 KATPVPPTLAPPLPNTTSVPPNKASSMPAPPPPPPPPPGAFSTSSALSASSIPLAPLPPP 428

Query: 208 STAGGARRTCPATSSSITGASTVPP 282
                     P+ ++S+  A   PP
Sbjct: 429 PP--------PSVATSVPSAPPPPP 445

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>ABCA2_RAT (Q9ESR9) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 67   EDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCP 195
            E FT+  P  S F PP PSP    + +  D   L  W+T L P
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPLSPDEDSLLAWNTSLPP 1618

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>ABCA2_MOUSE (P41234) ATP-binding cassette sub-family A member 2 (ATP-binding|
            cassette transporter 2) (ATP-binding cassette 2)
          Length = 2434

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 11/81 (13%)
 Frame = +1

Query: 67   EDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGA------- 225
            E FT+  P  S F PP PSP    + V  D   L  W+  L P     T   A       
Sbjct: 1577 ESFTQGLPL-SNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPTAGPETWTSAPSLPRLV 1635

Query: 226  ----RRTCPATSSSITGASTV 276
                R TC A  +  +  S+V
Sbjct: 1636 HEPVRCTCSAQGTGFSCPSSV 1656

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>UBR1_SCHPO (O60152) Ubiquitin-protein ligase E3 component N-recognin-1 (EC|
           6.-.-.-) (N-end-recognizing protein)
          Length = 1958

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = -1

Query: 433 SCAGLSVWIEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHLQVAQ-SMHR* 257
           SCA L  W+ D+   S  C      SS +       W   L N+     L +   ++   
Sbjct: 325 SCAVLLEWLADIAGSS-ICGKRNYFSSVICKELVRPWNCGLHNSDLTFRLSLRSLALPEI 383

Query: 256 STKKSPDTFCGRRLLSSAGGGDTVAWTTETE 164
               SPD F     ++S+G  DT +   ET+
Sbjct: 384 VAIDSPDIFLNEDHINSSGPSDTSSHMLETD 414

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>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 28/100 (28%), Positives = 35/100 (35%), Gaps = 6/100 (6%)
 Frame = +1

Query: 10   HKLSSARLGSSHRRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTP- 186
            H     R GS    SA  T       P  + F    P P   +  +R D PP    + P 
Sbjct: 806  HGPQPPRKGSEPLASAPFTSRPPASEPGAALFVDSSPMPRDCVPPLRLDVPPDGKRAAPS 865

Query: 187  -----LCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 291
                   P PR   +G  R   P T  +  G  T  P+GG
Sbjct: 866  GRPALSAPAPRLGVSGSRRLPFP-THRAPPGLLTRVPSGG 904

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>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = +1

Query: 61  ETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAG-GARRTC 237
           E  +   +SP     A PH       +CV ADAPP      PL P    S  G GA    
Sbjct: 396 EGAEAAARSPRPYLAAGPH-------SCVFADAPPALPALPPLPPRAPSSRPGEGAPAAA 448

Query: 238 PATSSSITGASTVPPA 285
            A   S + AS+  PA
Sbjct: 449 AAAGCSASSASSPGPA 464

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>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2|
          Length = 939

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 118 PSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPAT 246
           PS PRR    +   PP++    P  P P RS  G  +   PAT
Sbjct: 248 PSRPRR----KPTRPPVNRSPRPSTPSPNRSAGGPPKPAAPAT 286

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>GCSP_STRAW (Q827D7) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 961

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 406 EDVGQESKACSALVLVSSEVGCAATADWPS 317
           ED+G+  + C A++ + +EV    + +WP+
Sbjct: 864 EDLGELDRFCEAMIAIRAEVEKVGSGEWPA 893

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 23/56 (41%), Positives = 24/56 (42%)
 Frame = +1

Query: 118 PSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPPA 285
           P PP  L    AD PP      P  P P R T+       PA  S  TGA T PPA
Sbjct: 767 PKPPATLG---ADGPP------PGPPTPPRRTSRAPIEPTPA--SEATGAPTPPPA 811

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>FAF_DROME (P55824) Probable ubiquitin carboxyl-terminal hydrolase FAF (EC|
           3.1.2.15) (Ubiquitin thioesterase FAF) (Ubiquitin
           specific-processing protease FAF) (Deubiquitinating
           enzyme FAF) (Protein fat facets)
          Length = 2778

 Score = 23.9 bits (50), Expect(2) = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 202 RRSTAGGARRTCPATSSSITGAST 273
           RR T G    T P++SSS T  +T
Sbjct: 6   RRHTTGQPGSTAPSSSSSTTSTTT 29



 Score = 23.1 bits (48), Expect(2) = 6.3
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 293 GSGGVQESRRPVRRGGATHLRGNQDQGTA 379
           G+G V  S  P   GG+  L GNQDQ  A
Sbjct: 47  GTGTVANSSLP--GGGSGSLDGNQDQQPA 73

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein|
           phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat
           protein phosphatase) (Pleckstrin homology
           domain-containing family E protein 1) (Suprachiasmatic
           nucleus circadian oscillatory
          Length = 1717

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 184 PLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGG 291
           P  PLP R+   G RR   A      GA+ VP AGG
Sbjct: 79  PPGPLPGRAGGAGRRRRRGAPQPIAGGAAPVPGAGG 114

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
 Frame = +1

Query: 46   RRSALETEDFTRQSPWRSTFAPPHP-SPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGG 222
            R S  ET    R    R    P  P +PPRR   ++   PP  +   P  PL +      
Sbjct: 918  RESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKVEELPPKPLEQGDETPK 977

Query: 223  ARRTCP--ATSSSITGASTVPPAG 288
              +  P   T   + G    PP G
Sbjct: 978  PPKPDPLKITKGKLGGPKETPPNG 1001

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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
 Frame = +1

Query: 40  SHRRSALETEDFTRQSPWRSTFAPPHPSPPRRLTCVRADAP--PLSLWSTPLCPLPRRST 213
           S RRS+     F+  S    +F+P    PP        D P  P +  + P  P+ RR  
Sbjct: 184 SGRRSSPPPPGFSGPSLSSCSFSPSSSPPPP------GDLPLSPSAFSAAPGTPVTRRDP 237

Query: 214 AGGARRTCPATSSSITGASTVPPAGGWLRRCSRESTAS 327
               +  CP+   S T ++   P GG  R  S  S  S
Sbjct: 238 N---QACCPSCRRSTTPSTIWGPLGGLARSPSAHSLGS 272

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>FER_PYRAB (Q9UXY2) Ferredoxin|
          Length = 66

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +3

Query: 264 CIDCATCRWMAPEVFKRVDGQSAVAAQP-----TSEETRTKALQALLSCPTSSI 410
           CI  A C  + P+VF+  D      AQP       EE    A +A+ SCP S+I
Sbjct: 11  CIGDAICASLCPDVFEMNDEGK---AQPKVEIIEDEELYNCAKEAMESCPVSAI 61

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>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = +1

Query: 142 CVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWLRRC 306
           CV  D PP      P  P P  + A       PAT+ +   A      GG+L  C
Sbjct: 391 CVEHDRPP------PATPTPLTTAANSTTAATPATAPAPCHAGLNDSCGGFLSGC 439

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>ATS16_MOUSE (Q69Z28) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 16) (ADAM-TS
            16) (ADAM-TS16)
          Length = 1222

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
 Frame = +1

Query: 76   TRQSPWRSTFAP----PHPSPPRRLTCVRADAPPLSLWST-PLCPLPRRSTAGGARRT-- 234
            TR++ +R    P    P P PP    C     PP   WST P     R    G  +RT  
Sbjct: 953  TRRAHYRDESIPASLCPQPEPPIHQACNSQSCPP--AWSTGPWAECSRTCGKGWRKRTVA 1010

Query: 235  CPATSSS 255
            C +T+ S
Sbjct: 1011 CKSTNPS 1017

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>RHG26_HUMAN (Q9UNA1) Rho-GTPase-activating protein 26 (Oligophrenin-1-like|
           protein) (GTPase regulator associated with focal
           adhesion kinase)
          Length = 814

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +1

Query: 70  DFTRQSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTA 216
           D     P R    PP+PSP   L      +P   ++S P  P+P  ST+
Sbjct: 651 DLAVVKPTRPNSLPPNPSPTSPL------SPSWPMFSAPSSPMPTSSTS 693

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>PERT_BORPE (P14283) Pertactin precursor (P.93) [Contains: Outer membrane|
           protein P.69]
          Length = 910

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 415 VWIEDVGQESKACSALVLVSSEVGCAATADWPSTLLNTSGAIHL 284
           +W+ + G E  + + L+LV + +G AAT     TL N  G + +
Sbjct: 510 LWVRNSGSEPASANTLLLVQTPLGSAAT----FTLANKDGKVDI 549

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>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 11/76 (14%)
 Frame = +1

Query: 109 PPHPSPPRRLTCVRADAPPL----SLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTV 276
           PP P PP  L    A  PP        S P  P P     GG     P   S+    +T+
Sbjct: 505 PPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTI 564

Query: 277 PPA-------GGWLRR 303
            PA       G W  R
Sbjct: 565 SPAPLPDPAEGNWFHR 580

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -3

Query: 239 GHVLRAPPAVERRGR-GHSGVDHRDR-GGASARTQVSRR 129
           GH  R PP  E RG  GH G  HR   GG S    +S R
Sbjct: 819 GHDHRGPPPHEHRGHDGHGGGGHRGHDGGHSHGGDMSNR 857

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>AROA_BRUSU (Q8G3C4) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -3

Query: 215 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGD*RVKSS 66
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVATHLDHRIAMS 406

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>AROA_BRUAB (P0C100) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -3

Query: 215 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGD*RVKSS 66
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVATHLDHRIAMS 406

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>AROA_BRUA2 (Q2YPN6) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 450

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -3

Query: 215 AVERRGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGD*RVKSS 66
           A   RG   +GVD  +  G  + T   R GG+G GG  V  H D R+  S
Sbjct: 359 AAVARGLEANGVDCTE--GEMSLTVRGRPGGKGLGGGTVATHLDHRIAMS 406

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>ADCY1_HUMAN (Q08828) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase|
            type I) (ATP pyrophosphate-lyase 1)
            (Ca(2+)/calmodulin-activated adenylyl cyclase)
          Length = 1119

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 197  SPGARQQAAPAERVRRLLRRSPVHRLCHLQVDGSG 301
            S G + +    E V RLLRR P H +C  +V   G
Sbjct: 1011 STGVQGRIQVTEEVHRLLRRCPYHFVCRGKVSVKG 1045

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>TIG_RHIME (Q92Q12) Trigger factor (TF)|
          Length = 491

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -3

Query: 311 LEHLRSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERR 201
           LE+ R+ P A  ++ AP+ +E+V  H+L      +++
Sbjct: 398 LEYFRNTPGAAASLRAPLFEEKVVDHLLTEVSVTDKK 434

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>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)|
          Length = 209

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 88  PWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCP 195
           PW S ++ P PSP  +       APP+ +W+    P
Sbjct: 76  PWASLWSEPPPSPSSQ------PAPPMYIWTLSCAP 105

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>MI43_MYCIT (Q03490) 27 kDa lipoprotein antigen precursor (Mi43 antigen)|
          Length = 262

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +1

Query: 190 CPLPRRSTAGGARRTCPATSSSITGASTVPPAGGWLR 300
           CP P  ST GGA  T P+ S      S  P    W+R
Sbjct: 142 CPKPHESTPGGASSTPPSGS-----PSPAPAKPAWVR 173

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -3

Query: 239 GHVLRAPPAVERRGR-GHSGVDHRDR-GGASARTQVSRR 129
           GH  R PP  E RG  GH G  HR   GG S    +S R
Sbjct: 803 GHDHRGPPPHEHRGHDGHGGGGHRGHDGGHSHGGDMSNR 841

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>PCD15_MOUSE (Q99PJ1) Protocadherin-15 precursor|
          Length = 1943

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 24/84 (28%)
 Frame = +1

Query: 106  APPHPSPPRRLTCVRADA----------PPLSLWSTPLCPLPR--------------RST 213
            +PP+P PP+ +T     +          PPLSL   P  P PR                +
Sbjct: 1771 SPPNPPPPQLVTFSLPISTPPTSSLPLPPPLSLPPPPRPPAPRLFPQPPSTSIPSTDSIS 1830

Query: 214  AGGARRTCPATSSSITGASTVPPA 285
            A  A+ T  AT +  T  +T PPA
Sbjct: 1831 APAAKCTASATHARETTFTTQPPA 1854

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>UPP_ANASP (Q8YVB5) Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP|
           pyrophosphorylase) (UPRTase)
          Length = 216

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +1

Query: 103 FAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRSTAGGARRTCPATSSSITGASTVPP 282
           + PPHP     L   R  A P  L+ + +  L R  T   AR   P   +++     + P
Sbjct: 8   YVPPHPLIKHWLAVARDAATPSVLFRSAITELGRWLTYEAAREWLPTEETTVQTPLEICP 67

Query: 283 A 285
           A
Sbjct: 68  A 68

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>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated RNA-binding|
           fly homolog) (P19)
          Length = 399

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/40 (42%), Positives = 18/40 (45%)
 Frame = -3

Query: 203 RGRGHSGVDHRDRGGASARTQVSRRGGEGCGGAKVERHGD 84
           RG G  G  +RDRGG S        GG G GG    R  D
Sbjct: 332 RGSGGGGYHNRDRGGNS-----QGGGGGGGGGGGYSRFND 366

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>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
           (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = +1

Query: 82  QSPWRSTFAPPHPSPPRRLTCVRADAPPLSLWSTPLCPLPRRS--TAGGARRTCPATSSS 255
           +SP  +   P     P++L    A AP     S+P  P+   S   AGGA       SSS
Sbjct: 429 KSPGSTPTTPTSSQAPQKLDASAAAAPASLPPSSPAAPIATFSLLPAGGAPTVFSFGSSS 488

Query: 256 ITGASTV---PPA 285
           +  ++TV   PP+
Sbjct: 489 LKSSATVTGEPPS 501

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>HXA2_CHICK (Q08727) Homeobox protein Hox-A2|
          Length = 375

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 20/70 (28%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
 Frame = -3

Query: 308 EHLRSHPPAGGTVDAPVIDEEVAGHVLRAPPAVERR--GRGHSGVDHRDRGGASARTQVS 135
           E L S PP G T  +  I      H    PP  E+        G      GG    +  +
Sbjct: 20  ECLTSFPPVGDTFQSSSIKNSTLSHSTLIPPPFEQTIPSLNPGGHPRHSGGGRPKASPRA 79

Query: 134 RRGGEGCGGA 105
           R G  G  GA
Sbjct: 80  RSGSPGPAGA 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.127    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,104,232
Number of Sequences: 219361
Number of extensions: 1336080
Number of successful extensions: 6007
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 5397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5964
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result