>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase)
          Length = 1327

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 299 HHQHHFQQSNRSCSGRRLPPHAPPP 225
           HH HH QQ  +   G   PP  PPP
Sbjct: 9   HHHHHHQQQLQPAPGASAPPPPPPP 33

>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 2   SSCPTRPPIPPKCRSKNISLAPPPP 76
           SS P+ PP PP   S + S+APPPP
Sbjct: 352 SSAPSGPPPPPPPLSVSGSVAPPPP 376

>PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 495

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/40 (47%), Positives = 22/40 (55%)
 Frame = +2

Query: 281 ENGAGGEAAPLHALGVLLLHQGPPQRGRAVPRLPPHELEP 400
           + GAG E   LHA G  L H+GPP  G   P  PPH+  P
Sbjct: 147 KGGAGRE--DLHA-GTALHHRGPPHLGPPPP--PPHQGHP 181

>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 8   CPTRPPIPPKCRSKNISLAPPP 73
           CP+R P+PP+    + + APPP
Sbjct: 547 CPSRAPLPPQAPPPSPAAAPPP 568

>RT36_MOUSE (Q9CQX8) Mitochondrial 28S ribosomal protein S36 (S36mt) (MRP-S36)|
          Length = 102

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 11/53 (20%)
 Frame = +2

Query: 257 RCRSDLTAENGAGGEAAPLHALGV-----------LLLHQGPPQRGRAVPRLP 382
           R +  L+A    G  A P H+  +           LL+HQGPP     +  LP
Sbjct: 28  RDKPKLSASEALGSAALPSHSSAISQHSKGSTSPDLLMHQGPPDTAEIIKSLP 80

>EID1_ARATH (Q8LEA8) Phytochrome A-associated F-box protein (Empfindlicher im|
           dunkelroten Licht protein 1)
          Length = 336

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 351 LSEDALFLVFRHMNWNPRLIAHLSCVCKWFDEVAK 455
           + ED +F +F  +  +PR  A L+CVC  F  + +
Sbjct: 9   IPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVR 43

>AKP8L_HUMAN (Q9ULX6) A-kinase anchor protein 8-like (AKAP8-like protein)|
           (Neighbor of A-kinase anchoring protein 95) (Neighbor of
           AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase
           A-binding protein 95) (HAP95)
          Length = 646

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 11  PTRPPIPPKCRSKNISLAPPPP 76
           P +PP+PP+     +S  PPPP
Sbjct: 586 PAQPPVPPEPAPGAVSPPPPPP 607

>LCE4A_HUMAN (Q5TA78) Late cornified envelope protein 4A (Late envelope|
          protein 8) (Small proline-rich-like epidermal
          differentiation complex protein 4A)
          Length = 99

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +2

Query: 8  CPTRPPIPPKCRSKNISLAPPP 73
          CP  P  PPKC SK  S  PPP
Sbjct: 16 CPI-PKYPPKCPSKCASSCPPP 36

>PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3|
           (Brain-specific homeobox/POU domain protein 1) (Brain-1)
           (Brn-1 protein)
          Length = 500

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +2

Query: 281 ENGAGGEAAPLHALGVLLLHQGPPQRGRAVPRLPPHELEP 400
           + GAG +   LHA G  L H+GPP  G   P  PPH+  P
Sbjct: 150 KGGAGRD--DLHA-GTALHHRGPPHLGPPPP--PPHQGHP 184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,956,472
Number of Sequences: 219361
Number of extensions: 708504
Number of successful extensions: 3826
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3762
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)