Clone Name | bart61f02 |
---|---|
Clone Library Name | barley_pub |
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 48.1 bits (113), Expect = 9e-06 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 5/115 (4%) Frame = +1 Query: 13 STTYRPPGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATTITLAASTTDGQN----PIF 180 + T++ CP G + C NP+ + + LA T G P+ Sbjct: 104 ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGSTQQLGPLV 163 Query: 181 PVTFRAVGSCAPGELLES-LPAGAAGVAGFSRLPLSLPTQFASLLKVANEFALCL 342 V + + SCAP LL+ LP GVAG P+SLP Q AS + ++F CL Sbjct: 164 TVP-QFLFSCAPSFLLQKGLPRNIQGVAGLGHAPISLPNQLASHFGLQHQFTTCL 217
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 47.0 bits (110), Expect = 2e-05 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = +1 Query: 13 STTYRPPGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATTITLAASTTDGQN----PIF 180 + T++ CP G + C NP+ + + LA T G P+ Sbjct: 97 ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLV 156 Query: 181 PVTFRAVGSCAPGELLES-LPAGAAGVAGFSRLPLSLPTQFASLLKVANEFALCL 342 V + + SCAP L++ LP GVAG P+SLP Q AS + +F CL Sbjct: 157 TVP-QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCL 210
>ETV7_HUMAN (Q9Y603) Transcription factor ETV7 (Transcription factor Tel-2)| (ETS-related protein Tel2) (Tel-related Ets factor) Length = 341 Score = 32.0 bits (71), Expect = 0.68 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +1 Query: 37 CPKPGLRGEGQCACPAYPRNPVDGR 111 C + G R +G C+ PA P+ P+DGR Sbjct: 195 CAELGCRTQGVCSFPAMPQAPIDGR 219
>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3| Length = 299 Score = 29.3 bits (64), Expect = 4.4 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 11/95 (11%) Frame = +1 Query: 4 DEVSTTYRPPGCPKPG--------LRGEGQCACPAYPRNPVDGRCRSDD-ATTITLAAST 156 DE++TT P P P E Q P P + ATT T AA Sbjct: 143 DEITTTKPAPPPPPPAPPPTTEIPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPP 202 Query: 157 TDGQNPIFP--VTFRAVGSCAPGELLESLPAGAAG 255 P P VT+ G+ APG+++ AAG Sbjct: 203 PTTTTPTGPRQVTYSVTGTKAPGDIISVTYVDAAG 237
>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3| Length = 299 Score = 29.3 bits (64), Expect = 4.4 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 11/95 (11%) Frame = +1 Query: 4 DEVSTTYRPPGCPKPG--------LRGEGQCACPAYPRNPVDGRCRSDD-ATTITLAAST 156 DE++TT P P P E Q P P + ATT T AA Sbjct: 143 DEITTTKPAPPPPPPAPPPTTEIPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPP 202 Query: 157 TDGQNPIFP--VTFRAVGSCAPGELLESLPAGAAG 255 P P VT+ G+ APG+++ AAG Sbjct: 203 PTTTTPTGPRQVTYSVTGTKAPGDIISVTYVDAAG 237
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 28.9 bits (63), Expect = 5.8 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +1 Query: 31 PGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATT 135 PGC + QC R P DGRC+S+ + T Sbjct: 980 PGCIACDGPADNQCTLCEEERAPTDGRCQSEGSQT 1014
>3BP2_HUMAN (P78314) SH3 domain-binding protein 2 (3BP-2)| Length = 561 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/60 (26%), Positives = 25/60 (41%) Frame = +1 Query: 4 DEVSTTYRPPGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATTITLAASTTDGQNPIFP 183 D+ +Y P P+PG + PAYP PV + + + T+ G P+ P Sbjct: 177 DDEDDSYLEPDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGPLLP 236
>THE2_GEOSL (P61411) Putative thiamine-phosphate pyrophosphorylase (EC 2.5.1.3)| (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase) Length = 213 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/45 (40%), Positives = 25/45 (55%) Frame = +1 Query: 142 LAASTTDGQNPIFPVTFRAVGSCAPGELLESLPAGAAGVAGFSRL 276 LAA+T + P+F A+G + E+L AGAAGVA S + Sbjct: 150 LAATTKEIHIPVF-----ALGGIKEANIPEALAAGAAGVALISAI 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,844,814 Number of Sequences: 219361 Number of extensions: 516844 Number of successful extensions: 2201 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2081 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2197 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)