ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
17SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) ... 48 9e-06
27SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Co... 47 2e-05
3ETV7_HUMAN (Q9Y603) Transcription factor ETV7 (Transcription fac... 32 0.68
4MMPS3_MYCTU (P65378) Putative membrane protein mmpS3 29 4.4
5MMPS3_MYCBO (P65379) Putative membrane protein mmpS3 29 4.4
6PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type... 29 5.8
73BP2_HUMAN (P78314) SH3 domain-binding protein 2 (3BP-2) 28 9.9
8THE2_GEOSL (P61411) Putative thiamine-phosphate pyrophosphorylas... 28 9.9

>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 48.1 bits (113), Expect = 9e-06
 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
 Frame = +1

Query: 13  STTYRPPGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATTITLAASTTDGQN----PIF 180
           + T++   CP     G  +  C     NP+  +    +     LA   T G      P+ 
Sbjct: 104 ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQGSTQQLGPLV 163

Query: 181 PVTFRAVGSCAPGELLES-LPAGAAGVAGFSRLPLSLPTQFASLLKVANEFALCL 342
            V  + + SCAP  LL+  LP    GVAG    P+SLP Q AS   + ++F  CL
Sbjct: 164 TVP-QFLFSCAPSFLLQKGLPRNIQGVAGLGHAPISLPNQLASHFGLQHQFTTCL 217



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>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
 Frame = +1

Query: 13  STTYRPPGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATTITLAASTTDGQN----PIF 180
           + T++   CP     G  +  C     NP+  +    +     LA   T G      P+ 
Sbjct: 97  ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLV 156

Query: 181 PVTFRAVGSCAPGELLES-LPAGAAGVAGFSRLPLSLPTQFASLLKVANEFALCL 342
            V  + + SCAP  L++  LP    GVAG    P+SLP Q AS   +  +F  CL
Sbjct: 157 TVP-QFLFSCAPSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCL 210



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>ETV7_HUMAN (Q9Y603) Transcription factor ETV7 (Transcription factor Tel-2)|
           (ETS-related protein Tel2) (Tel-related Ets factor)
          Length = 341

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 37  CPKPGLRGEGQCACPAYPRNPVDGR 111
           C + G R +G C+ PA P+ P+DGR
Sbjct: 195 CAELGCRTQGVCSFPAMPQAPIDGR 219



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>MMPS3_MYCTU (P65378) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 11/95 (11%)
 Frame = +1

Query: 4   DEVSTTYRPPGCPKPG--------LRGEGQCACPAYPRNPVDGRCRSDD-ATTITLAAST 156
           DE++TT   P  P P            E Q      P  P      +   ATT T AA  
Sbjct: 143 DEITTTKPAPPPPPPAPPPTTEIPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPP 202

Query: 157 TDGQNPIFP--VTFRAVGSCAPGELLESLPAGAAG 255
                P  P  VT+   G+ APG+++      AAG
Sbjct: 203 PTTTTPTGPRQVTYSVTGTKAPGDIISVTYVDAAG 237



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>MMPS3_MYCBO (P65379) Putative membrane protein mmpS3|
          Length = 299

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 11/95 (11%)
 Frame = +1

Query: 4   DEVSTTYRPPGCPKPG--------LRGEGQCACPAYPRNPVDGRCRSDD-ATTITLAAST 156
           DE++TT   P  P P            E Q      P  P      +   ATT T AA  
Sbjct: 143 DEITTTKPAPPPPPPAPPPTTEIPTATETQTVTVTPPPPPPPATTTAPPPATTTTAAAPP 202

Query: 157 TDGQNPIFP--VTFRAVGSCAPGELLESLPAGAAG 255
                P  P  VT+   G+ APG+++      AAG
Sbjct: 203 PTTTTPTGPRQVTYSVTGTKAPGDIISVTYVDAAG 237



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>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 31   PGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATT 135
            PGC       + QC      R P DGRC+S+ + T
Sbjct: 980  PGCIACDGPADNQCTLCEEERAPTDGRCQSEGSQT 1014



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>3BP2_HUMAN (P78314) SH3 domain-binding protein 2 (3BP-2)|
          Length = 561

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = +1

Query: 4   DEVSTTYRPPGCPKPGLRGEGQCACPAYPRNPVDGRCRSDDATTITLAASTTDGQNPIFP 183
           D+   +Y  P  P+PG   +     PAYP  PV    +   +      + T+ G  P+ P
Sbjct: 177 DDEDDSYLEPDSPEPGRLEDALMHPPAYPPPPVPTPRKPAFSDMPRAHSFTSKGPGPLLP 236



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>THE2_GEOSL (P61411) Putative thiamine-phosphate pyrophosphorylase (EC 2.5.1.3)|
           (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate
           synthase)
          Length = 213

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +1

Query: 142 LAASTTDGQNPIFPVTFRAVGSCAPGELLESLPAGAAGVAGFSRL 276
           LAA+T +   P+F     A+G      + E+L AGAAGVA  S +
Sbjct: 150 LAATTKEIHIPVF-----ALGGIKEANIPEALAAGAAGVALISAI 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,844,814
Number of Sequences: 219361
Number of extensions: 516844
Number of successful extensions: 2201
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2197
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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