>WASF3_MOUSE (Q8VHI6) Wiskott-Aldrich syndrome protein family member 3|
           (WASP-family protein member 3) (WAVE-3 protein)
          Length = 501

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +1

Query: 205 LLSVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPPAHDEI 366
           LL+ A   PGP  P     GPS+ +S+ M     HGP  P+A+A    PA   I
Sbjct: 390 LLATAPPPPGPPPPPPGPPGPSSLSSSPM-----HGP--PVAEAKRPEPAQPPI 436

>NGF_XENLA (P21617) Nerve growth factor precursor (NGF)|
          Length = 231

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = +1

Query: 208 LSVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPPAHD 360
           L +A L    A P T +H P A +SA+ RI H       L  +HGK  A +
Sbjct: 8   LLIAILISVQAAPKTKDHAP-ARSSAKSRIPHHTHRTKSLHHSHGKLEAKE 57

>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 4 (Hyperpolarization-activated
           cation channel 4) (HAC-4)
          Length = 1175

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
 Frame = +1

Query: 199 RALLSVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSP-----LADAHGKPPA 354
           R L S+A   P PA PA++   P   +SA + +    G  +P     L    G PPA
Sbjct: 825 RRLQSLAPSAPSPASPASSPSQPDTPSSASLHVQPLPGCSTPAGLGSLLPTAGSPPA 881

>NPTXR_HUMAN (O95502) Neuronal pentraxin receptor|
          Length = 499

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 184 GSSDDRALLSVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPP 351
           G +D+ ++ S A+  PGP    +A HG   +A           P +P A AH  PP
Sbjct: 38  GGADNASVASGAAASPGPQRSLSALHGAGGSAGPPAL------PGAPAASAHPLPP 87

>SSI2_STRLO (P35706) Trypsin inhibitor STI2 precursor|
          Length = 144

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +1

Query: 181 TGSSDDRALLSVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPPA 354
           TG++      + ASL+   A   T  HG SAAA++ +R V  +  C+P A      PA
Sbjct: 23  TGAALATPAAAPASLYAPSALVLTVGHGTSAAAASPLRAVTLN--CAPTASGTHPAPA 78

>NORM_THEMA (Q9WZS2) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 464

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 332 SARGEHGPCWWTILILADAAALGPCSAVAGQAGPGNRDATLSSARSS 192
           S  G     +W + ++  AA++G    +A   G GNR A  S A +S
Sbjct: 56  SGVGLSNQVFWVVQVVLIAASMGATVTIANAIGAGNRKAVRSLAWNS 102

>EVX1_MOUSE (P23683) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 416

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 284 ADAAALGPCSAVAGQAGPGNRDATLSSARSS 192
           A AAA GPCS +A  +GP N  A  ++A ++
Sbjct: 344 AAAAAAGPCSCLACHSGPANGLAPRAAAAAA 374

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +1

Query: 232 GPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPPAHDEILAAD 378
           GP  PA A+ GP A   +  ++  +H P  P      +P +   ILA+D
Sbjct: 466 GPGTPAPAKPGPHAKEPSHCKLCPRHSPLDPTPHTLVQPIS--AILASD 512

>LAP4_HUMAN (Q14160) LAP4 protein (Scribble homolog protein) (hScrib)|
          Length = 1630

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = +1

Query: 193  DDRALLSVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPPAHDEILA 372
            D RAL +V S         + +  PS AA  +M       PCSP       PP+ DE+ A
Sbjct: 1267 DYRALAAVPSA-------GSVQRVPSGAAGGKMA----ESPCSPSGQQPPSPPSPDELPA 1315

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +1

Query: 211 SVASLFPGPACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPPAHDEILAA 375
           +  SL P P  PA++   P AAA A           +P A      PA   I AA
Sbjct: 227 AAGSLLPAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAA 281

>HIC1_CHICK (Q90850) Hypermethylated in cancer 1 protein (Hic-1) (GammaFBP)|
           (Fragment)
          Length = 676

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 235 PACPATAEHGPSAAASARMRIVHQHGPCSPLADAHGKPP 351
           PA P   + G   A++++   +H HG C P  + H  PP
Sbjct: 203 PAAPLNTQCGELYASASQGTPLHPHGLCPP--ERHCSPP 239

>SSI_STRLI (P61153) Protease inhibitor precursor (SLPI) (Trypsin inhibitor|
           STI1) (SILA-3)
          Length = 144

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 13/59 (22%)
 Frame = +1

Query: 217 ASLFPGPACPATAEHGPSAAASARMRIV-------------HQHGPCSPLADAHGKPPA 354
           ASL+   A   T  HG SAA +A +R V                  C+ L  AHG P A
Sbjct: 35  ASLYAPSALVLTVGHGESAATAAPLRAVTLTCAPTASGTHPAAAAACAELRAAHGDPSA 93

>SSI_STRCO (P61152) Subtilase-type protease inhibitor precursor|
          Length = 144

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 13/59 (22%)
 Frame = +1

Query: 217 ASLFPGPACPATAEHGPSAAASARMRIV-------------HQHGPCSPLADAHGKPPA 354
           ASL+   A   T  HG SAA +A +R V                  C+ L  AHG P A
Sbjct: 35  ASLYAPSALVLTVGHGESAATAAPLRAVTLTCAPTASGTHPAAAAACAELRAAHGDPSA 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.133    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,963,639
Number of Sequences: 219361
Number of extensions: 639850
Number of successful extensions: 2200
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)