Clone Name | bart61e10 |
---|---|
Clone Library Name | barley_pub |
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 64.3 bits (155), Expect = 1e-10 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 3/82 (3%) Frame = +2 Query: 95 YYNAIFSFGDSLSDTGNFVII--NSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLL 268 ++ AIF+FGDS SDTG +G F P R +GRLVIDF+AE+LG+P L Sbjct: 27 HFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYL 86 Query: 269 PPSANK-GTNFSQGANFAVMGA 331 + G+NFS GANFA G+ Sbjct: 87 SAFLDSVGSNFSHGANFATAGS 108
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 62.4 bits (150), Expect = 4e-10 Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 10/108 (9%) Frame = +2 Query: 41 LLCVXXXXXXXXXXPLPRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYA----- 205 LLC+ P AIF+FGDS SDTG GK PPY Sbjct: 17 LLCMLSLAYASETCDFP----AIFNFGDSNSDTG-------GKAAAFYPLNPPYGETFFH 65 Query: 206 ----RCSNGRLVIDFLAEALGVPLLPP-SANKGTNFSQGANFAVMGAT 334 R S+GRL+IDF+AE+ +P L P ++ G+NF GA+FA G+T Sbjct: 66 RSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGST 113
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 38.1 bits (87), Expect = 0.008 Identities = 27/81 (33%), Positives = 41/81 (50%) Frame = +2 Query: 98 YNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLLPPS 277 YN ++ FGDSLSD G N ++ + +L DF+A+ LG+ L+ + Sbjct: 25 YNNLYVFGDSLSDGG-----------NNGRYTVDGINGTESKLYNDFIAQQLGIELV--N 71 Query: 278 ANKGTNFSQGANFAVMGATAL 340 + KG G N+A GATA+ Sbjct: 72 SKKG-----GTNYAAGGATAV 87
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 36.2 bits (82), Expect = 0.031 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%) Frame = +2 Query: 104 AIFSFGDSLSDTGN----FVIINSGKLPNMPKFPPPYA--RCSNGRLVIDFLAEALGVPL 265 A+F FGDS+ DTGN + P FP A R SNGR+ D++++ LGV Sbjct: 125 AVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKE 184 Query: 266 LPPS 277 + P+ Sbjct: 185 IVPA 188
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 35.8 bits (81), Expect = 0.041 Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 11/107 (10%) Frame = +1 Query: 103 RHFQLRRLLIRH--GQL-------RHHQLRQASQHAQVPAAVRPLLQRPSRHRLPRRGVG 255 RH++ RR +RH G L R + R+A A A+V P R RL RG Sbjct: 337 RHWRRRRRRVRHREGALPAAHPDDRRRRRRRAHPDAAAYASV-PAHAPAHRGRLRVRGST 395 Query: 256 SXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEH--PAVQ 390 + + P + LR DGR RAGP G QR H PAVQ Sbjct: 396 AAVPRPL--------PRQHLRRDGRGRAGPHHRGGMQRQPHAGPAVQ 434
>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor (Probable| G-protein coupled receptor 158-like 1) Length = 2367 Score = 35.8 bits (81), Expect = 0.041 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Frame = +1 Query: 22 RSIVVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLLIRHGQL----RHHQLRQASQHAQV 189 RS H L G RL + S+ L + L+ Q + Q ++ + + Sbjct: 816 RSASAHNLTVGERLPRARPASLQKSLSVASSREKALLMASQAYLEETYRQAKEREERKKA 875 Query: 190 PAAVRPLLQRPSRHRLPR-RGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQ 366 AA+ L++RPS RL R RG P + D H +G + ++ Sbjct: 876 KAAMASLVRRPSARRLERPRGAPLSAPPS---------PAKSSSVDSSHTSGRLHEEARR 926 Query: 367 RVEHPAVQH 393 R+ HP ++H Sbjct: 927 RLPHPPIRH 935
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 35.4 bits (80), Expect = 0.054 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%) Frame = +2 Query: 104 AIFSFGDSLSDTGNFVIINSGKLPNMP------KFPPPYARCSNGRLVIDFLAEALGVPL 265 A+F FGDS+ DTGN + + N KF R SNG + D+LA+ +GV Sbjct: 204 AVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKE 263 Query: 266 LPPS 277 + P+ Sbjct: 264 IVPA 267
>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent| haemolysin) (LDH) (Atypical phospholipase) (Phospholipase A2) (Lysophospholipase) Length = 418 Score = 35.4 bits (80), Expect = 0.054 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +2 Query: 89 PRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPL 265 P N + + GDSLSDTGN + + PN + SNG + +++A+A +PL Sbjct: 141 PDQINKVVALGDSLSDTGNIFNASQWRFPNPNSW--FLGHFSNGFVWTEYIAKAKNLPL 197
>CIC_MOUSE (Q924A2) Protein capicua homolog| Length = 1606 Score = 33.1 bits (74), Expect = 0.27 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%) Frame = -1 Query: 107 WRCSTAATEPPPLPSKRRPHTRGCTTMDR---SSSPW 6 W + ++ PPPLP++ RP T+G T + SSS W Sbjct: 1236 WPPTARSSPPPPLPAEERPGTKGPETASKFPSSSSDW 1272
>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC| 2.3.1.43) (Glycerophospholipid-cholesterol acyltransferase) (GCAT) Length = 335 Score = 32.3 bits (72), Expect = 0.45 Identities = 24/69 (34%), Positives = 31/69 (44%) Frame = +2 Query: 35 CILLCVXXXXXXXXXXPLPRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCS 214 C+L V P ++ I FGDSLSDTG G LP+ P P R S Sbjct: 7 CLLGLVALTVQAADSRPA---FSRIVMFGDSLSDTGKMYSKMRGYLPSSP--PYYEGRFS 61 Query: 215 NGRLVIDFL 241 NG + ++ L Sbjct: 62 NGPVWLEQL 70
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 30.8 bits (68), Expect = 1.3 Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 1/105 (0%) Frame = +1 Query: 55 RRLDGSGGGSVAAVLQRHFQLRRLL-IRHGQLRHHQLRQASQHAQVPAAVRPLLQRPSRH 231 R + S GG A+ H Q R RHG RH Q +S+H+ +P R SRH Sbjct: 3277 RHAETSSGGQAAS---SHEQARSSPGERHGS-RHQQSADSSRHSGIPRGQASSAVRDSRH 3332 Query: 232 RLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQ 366 GS +GH + Q G +AGP Q+ Sbjct: 3333 ------WGSSGSQASDSEGHSEESDTQ-SVSGHGQAGPHQQSHQE 3370
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 30.4 bits (67), Expect = 1.7 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 277 GEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEHPAVQH 393 G+QG QL G+Q + G+ + G Q QGQQ + QH Sbjct: 588 GQQGQQLGQGQQGQQPGQGQQGQQPAQGQQGQQPGQGQH 626
>YK27_YEAST (P36140) Hypothetical 12.3 kDa protein in GAP1-NAP1 intergenic| region Length = 101 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = +1 Query: 85 VAAVLQRHFQLRRLLIRHGQLRHHQLRQASQHAQVPAAVRPLLQRPSRHRLPR 243 V A Q LR++ RH R H H + RPLL RP R R+PR Sbjct: 53 VPACQQNRLALRQIPRRHPPSRDH-------HLLLRLRPRPLLLRPPRTRIPR 98
>Y2619_VIBPA (Q87LJ3) UPF0235 protein VP2619| Length = 96 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Frame = +1 Query: 7 HGEDERSIVVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLL--IRHGQLRHHQLRQASQH 180 HGE+ + + P V DG + L + F++ + L I G+L H+ + Sbjct: 31 HGEELKIAITAPPV-----DGKANAHLTKFLAKQFKIAKGLVHIEKGELGRHKQIRIESP 85 Query: 181 AQVPAAVRPLL 213 Q+PA V+ +L Sbjct: 86 VQIPAEVKAIL 96
>TITF1_CANFA (P43698) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 371 Score = 29.6 bits (65), Expect = 2.9 Identities = 23/75 (30%), Positives = 26/75 (34%) Frame = +1 Query: 139 GQLRHHQLRQASQHAQVPAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLR 318 G L+ H +QA Q AQ A + VGS GHQ Q Sbjct: 280 GSLQGHAQQQAQQQAQAAQAAAAAIS-----------VGSGGPGLGAHPGHQPGSAGQSP 328 Query: 319 GDGRHRAGPQVLQGQ 363 H A P LQGQ Sbjct: 329 DLAHHAASPAALQGQ 343
>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic| region precursor Length = 592 Score = 29.6 bits (65), Expect = 2.9 Identities = 25/82 (30%), Positives = 33/82 (40%) Frame = +2 Query: 89 PRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLL 268 P Y+ + FGDSLSD G F + L + P G+L ++ LG Sbjct: 25 PSPYSGMIVFGDSLSDAGQFGGVRFTNLDANGNYAPVSPMILGGQLGVN--PTELGPSTS 82 Query: 269 PPSANKGTNFSQGANFAVMGAT 334 P N G N+AV G T Sbjct: 83 P--LNPVLGLPDGNNWAVGGYT 102
>SUR2_CAEEL (Q10669) Protein sur-2| Length = 1587 Score = 29.3 bits (64), Expect = 3.8 Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 25/158 (15%) Frame = +1 Query: 13 EDERSIVVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLLIRH----------GQLRHH-- 156 E E+ + H + L+ + S +Q H Q LL H L+HH Sbjct: 1399 EQEQHVKAH-----QPLESTPSVSSLPQMQHHLQQAPLLPSHQMMPPPQQHSSSLQHHLQ 1453 Query: 157 ------QLRQASQHAQVPAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLR 318 Q+ SQH + Q+ +H++P + HQ Q G Q Sbjct: 1454 HHTSTHQMMDTSQHQTIQQQSNHPTQQQLQHQIPNMSM------------HQ-QMGPQYP 1500 Query: 319 GD-GRHRAGP------QVLQGQQRVEHPAVQHFHELPA 411 G H +GP Q G +HP + H ++PA Sbjct: 1501 GAVFHHPSGPVGHVPMQYGMGHHMQQHPHLPHHQQMPA 1538
>HLDE_STRCO (Q9Z5B5) Bifunctional protein hldE [Includes: D-beta-D-heptose| 7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose 7-phosphotransferase); D-beta-D-heptose 1-phosphate adenosyltransferase (EC 2.7.7.-)] Length = 463 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = -3 Query: 312 LAPWLKLVPLFADGGSSGTPNASARKSMTRRPLEQRAYGGGNL 184 LAPWLKL+PL +GT R RP+ + GGG + Sbjct: 87 LAPWLKLIPL----PLTGTVPEKTRVLAQDRPVVRLDRGGGRV 125
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 28.9 bits (63), Expect = 5.0 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 5/62 (8%) Frame = +1 Query: 235 LPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRA-----GPQVLQGQQRVEHPAVQHFH 399 +P GV VGE G Q + R GR R G ++L GQ+ VEH H H Sbjct: 727 VPGPGVRVRRAEAVGEGGEQRREAAAARVPGRARGALGGLGAELLVGQRVVEH---HHAH 783 Query: 400 EL 405 L Sbjct: 784 VL 785
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 28.5 bits (62), Expect = 6.6 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Frame = -3 Query: 342 SSAVAPITAKLAPWLKLVPLFADGGSSGTPNASARKSMTRRPLEQRA----------YGG 193 ++ V P+ K+VP++ GG S P RK + RP QR+ G Sbjct: 59 NNQVCPVCKSAIDGNKVVPIYGRGGDSSDP----RKKVPPRPKGQRSEPPPQSFAGFNWG 114 Query: 192 GNLGMLG 172 G+ GM+G Sbjct: 115 GDGGMMG 121
>TITF1_RAT (P23441) Thyroid transcription factor 1 (Thyroid nuclear factor 1)| (TTF-1) (Homeobox protein Nkx-2.1) Length = 372 Score = 28.5 bits (62), Expect = 6.6 Identities = 30/119 (25%), Positives = 39/119 (32%), Gaps = 20/119 (16%) Frame = +1 Query: 67 GSGGGSVAAVLQRHFQLRR-------LLIRHGQ-------------LRHHQLRQASQHAQ 186 G GGG Q+ Q + +L++ G+ L+ H +QA Q AQ Sbjct: 237 GGGGGGAGCPQQQQAQQQSPRRVAVPVLVKDGKPCQAGAPAPGAASLQGHAQQQAQQQAQ 296 Query: 187 VPAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQ 363 A + VGS GHQ Q H A P LQGQ Sbjct: 297 AAQAAAAAIS-----------VGSGGAGLGAHPGHQPGSAGQSPDLAHHAASPAALQGQ 344
>O2AP1_HUMAN (Q8NGE2) Olfactory receptor 2AP1 (Olfactory receptor OR12-9)| Length = 309 Score = 28.5 bits (62), Expect = 6.6 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = +2 Query: 146 FVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLLPPSANKGTNFSQGANFAVM 325 F+I KLP+ + ++ CS+ +VI + + PSA +G F++G + Sbjct: 218 FIIKTILKLPSAQQRTKAFSTCSSHMIVISLSYGSCMFMYINPSAKEGDTFNKGVALLIT 277 Query: 326 GATAL 340 L Sbjct: 278 SVAPL 282
>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 28.5 bits (62), Expect = 6.6 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +1 Query: 190 PAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDG 327 PA V P ++PS H P + +G + + ++L GDG Sbjct: 668 PAEVGPTTEKPSSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDG 713
>DPO3A_THEAQ (Q9XDH5) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1220 Score = 28.1 bits (61), Expect = 8.6 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 242 AEALGVPLLPPSANKGTNFSQGANFAVMGATAL 340 A ALG+P+LPP N+ G +F V+G L Sbjct: 861 ARALGIPVLPPDVNR-----SGFDFKVVGEEIL 888
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 28.1 bits (61), Expect = 8.6 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%) Frame = +1 Query: 100 QRHFQLRRLLIRHGQLRHHQLRQ-ASQHAQVPAAVRPLLQRPSRHRLPRRGVGSXXXXXV 276 Q+H Q + H Q++HHQL+Q QH Q Q+ +H+ Sbjct: 166 QQHHQQMQQQQHHQQMQHHQLQQHQHQHQQ--------QQQQQQHQQQHH---------- 207 Query: 277 GEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEHPAVQHFHE 402 +Q Q Q Q + +H Q Q Q+ +H Q H+ Sbjct: 208 QQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQHQHNQQQHQ 249
>RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4| Length = 192 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/33 (30%), Positives = 18/33 (54%) Frame = +2 Query: 134 DTGNFVIINSGKLPNMPKFPPPYARCSNGRLVI 232 + + + + S P P++ PPY + SNG L + Sbjct: 133 EVNHVIEVKSSSPPKPPEYLPPYLQLSNGTLTV 165
>KTHY_TREPA (O83373) Putative thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 208 Score = 28.1 bits (61), Expect = 8.6 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 31 VVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLLI 132 ++H V +DG+G + L+RHFQ R+ ++ Sbjct: 3 ILHNFVVFEGIDGTGTSTQLRALERHFQARKDMV 36
>SYV_THEVO (Q97CR9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 790 Score = 28.1 bits (61), Expect = 8.6 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = +2 Query: 92 RYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARC 211 RYY F SD GN V + LP P+ PP RC Sbjct: 396 RYYGVPFPVW-YCSDCGNTVFADDKDLPVDPRLQPPSKRC 434
>CORTO_DROME (P41046) Centrosomal and chromosomal factor (CCF)| (Chromocentrosomin) Length = 550 Score = 28.1 bits (61), Expect = 8.6 Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 8/122 (6%) Frame = +1 Query: 70 SGGGSVAAVLQRHFQLRRLLIRHGQLRHH--QLRQASQHAQVPAAVRPLLQRPSR----- 228 S G S + LQ+ Q ++ Q +HH Q +Q HA V A + LLQ+ + Sbjct: 16 SHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHR 75 Query: 229 -HRLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEHPAVQHFHEL 405 H P S Q Q + + + Q Q QQ+ + A + + Sbjct: 76 HHHQPANTSSSSNSRHSHAAATQTQVAAAVANSRQQQQQQQQQQQQQQQQQTASSNSNAA 135 Query: 406 PA 411 PA Sbjct: 136 PA 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,259,910 Number of Sequences: 219361 Number of extensions: 1146223 Number of successful extensions: 4188 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3986 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4167 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)