ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 64 1e-10
2EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 62 4e-10
3LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglyc... 38 0.008
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 36 0.031
5YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'regio... 36 0.041
6GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 pre... 36 0.041
7APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 35 0.054
8HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecith... 35 0.054
9CIC_MOUSE (Q924A2) Protein capicua homolog 33 0.27
10GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase p... 32 0.45
11FILA_HUMAN (P20930) Filaggrin 31 1.3
12GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 ... 30 1.7
13YK27_YEAST (P36140) Hypothetical 12.3 kDa protein in GAP1-NAP1 i... 30 1.7
14Y2619_VIBPA (Q87LJ3) UPF0235 protein VP2619 30 2.3
15TITF1_CANFA (P43698) Thyroid transcription factor 1 (Thyroid nuc... 30 2.9
16YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG i... 30 2.9
17SUR2_CAEEL (Q10669) Protein sur-2 29 3.8
18HLDE_STRCO (Q9Z5B5) Bifunctional protein hldE [Includes: D-beta-... 29 5.0
19VNUA_PRVKA (P33485) Probable nuclear antigen 29 5.0
20RNF5_CAEEL (Q09463) RING finger protein 5 28 6.6
21TITF1_RAT (P23441) Thyroid transcription factor 1 (Thyroid nucle... 28 6.6
22O2AP1_HUMAN (Q8NGE2) Olfactory receptor 2AP1 (Olfactory receptor... 28 6.6
23CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1) 28 6.6
24DPO3A_THEAQ (Q9XDH5) DNA polymerase III alpha subunit (EC 2.7.7.7) 28 8.6
25GBF_DICDI (P36417) G-box-binding factor (GBF) 28 8.6
26RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4 28 8.6
27KTHY_TREPA (O83373) Putative thymidylate kinase (EC 2.7.4.9) (dT... 28 8.6
28SYV_THEVO (Q97CR9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 28 8.6
29CORTO_DROME (P41046) Centrosomal and chromosomal factor (CCF) (C... 28 8.6

>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = +2

Query: 95  YYNAIFSFGDSLSDTGNFVII--NSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLL 268
           ++ AIF+FGDS SDTG        +G       F  P  R  +GRLVIDF+AE+LG+P L
Sbjct: 27  HFPAIFNFGDSNSDTGGLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGLPYL 86

Query: 269 PPSANK-GTNFSQGANFAVMGA 331
               +  G+NFS GANFA  G+
Sbjct: 87  SAFLDSVGSNFSHGANFATAGS 108



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
 Frame = +2

Query: 41  LLCVXXXXXXXXXXPLPRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYA----- 205
           LLC+            P    AIF+FGDS SDTG       GK        PPY      
Sbjct: 17  LLCMLSLAYASETCDFP----AIFNFGDSNSDTG-------GKAAAFYPLNPPYGETFFH 65

Query: 206 ----RCSNGRLVIDFLAEALGVPLLPP-SANKGTNFSQGANFAVMGAT 334
               R S+GRL+IDF+AE+  +P L P  ++ G+NF  GA+FA  G+T
Sbjct: 66  RSTGRYSDGRLIIDFIAESFNLPYLSPYLSSLGSNFKHGADFATAGST 113



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>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)|
          Length = 645

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 27/81 (33%), Positives = 41/81 (50%)
 Frame = +2

Query: 98  YNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLLPPS 277
           YN ++ FGDSLSD G           N  ++       +  +L  DF+A+ LG+ L+  +
Sbjct: 25  YNNLYVFGDSLSDGG-----------NNGRYTVDGINGTESKLYNDFIAQQLGIELV--N 71

Query: 278 ANKGTNFSQGANFAVMGATAL 340
           + KG     G N+A  GATA+
Sbjct: 72  SKKG-----GTNYAAGGATAV 87



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
 Frame = +2

Query: 104 AIFSFGDSLSDTGN----FVIINSGKLPNMPKFPPPYA--RCSNGRLVIDFLAEALGVPL 265
           A+F FGDS+ DTGN       +     P    FP   A  R SNGR+  D++++ LGV  
Sbjct: 125 AVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKE 184

Query: 266 LPPS 277
           + P+
Sbjct: 185 IVPA 188



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>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 38/107 (35%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
 Frame = +1

Query: 103 RHFQLRRLLIRH--GQL-------RHHQLRQASQHAQVPAAVRPLLQRPSRHRLPRRGVG 255
           RH++ RR  +RH  G L       R  + R+A   A   A+V P      R RL  RG  
Sbjct: 337 RHWRRRRRRVRHREGALPAAHPDDRRRRRRRAHPDAAAYASV-PAHAPAHRGRLRVRGST 395

Query: 256 SXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEH--PAVQ 390
           +     +        P + LR DGR RAGP    G QR  H  PAVQ
Sbjct: 396 AAVPRPL--------PRQHLRRDGRGRAGPHHRGGMQRQPHAGPAVQ 434



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>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor (Probable|
            G-protein coupled receptor 158-like 1)
          Length = 2367

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
 Frame = +1

Query: 22   RSIVVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLLIRHGQL----RHHQLRQASQHAQV 189
            RS   H L  G RL  +   S+   L       + L+   Q      + Q ++  +  + 
Sbjct: 816  RSASAHNLTVGERLPRARPASLQKSLSVASSREKALLMASQAYLEETYRQAKEREERKKA 875

Query: 190  PAAVRPLLQRPSRHRLPR-RGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQ 366
             AA+  L++RPS  RL R RG                 P +    D  H +G    + ++
Sbjct: 876  KAAMASLVRRPSARRLERPRGAPLSAPPS---------PAKSSSVDSSHTSGRLHEEARR 926

Query: 367  RVEHPAVQH 393
            R+ HP ++H
Sbjct: 927  RLPHPPIRH 935



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
 Frame = +2

Query: 104 AIFSFGDSLSDTGNFVIINSGKLPNMP------KFPPPYARCSNGRLVIDFLAEALGVPL 265
           A+F FGDS+ DTGN   + +    N        KF     R SNG +  D+LA+ +GV  
Sbjct: 204 AVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKE 263

Query: 266 LPPS 277
           + P+
Sbjct: 264 IVPA 267



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>HLT_VIBPA (Q99289) Thermolabile hemolysin precursor (TL) (Lecithin-dependent|
           haemolysin) (LDH) (Atypical phospholipase)
           (Phospholipase A2) (Lysophospholipase)
          Length = 418

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = +2

Query: 89  PRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPL 265
           P   N + + GDSLSDTGN    +  + PN   +       SNG +  +++A+A  +PL
Sbjct: 141 PDQINKVVALGDSLSDTGNIFNASQWRFPNPNSW--FLGHFSNGFVWTEYIAKAKNLPL 197



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>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -1

Query: 107  WRCSTAATEPPPLPSKRRPHTRGCTTMDR---SSSPW 6
            W  +  ++ PPPLP++ RP T+G  T  +   SSS W
Sbjct: 1236 WPPTARSSPPPPLPAEERPGTKGPETASKFPSSSSDW 1272



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>GCAT_AERHY (P10480) Phosphatidylcholine-sterol acyltransferase precursor (EC|
           2.3.1.43) (Glycerophospholipid-cholesterol
           acyltransferase) (GCAT)
          Length = 335

 Score = 32.3 bits (72), Expect = 0.45
 Identities = 24/69 (34%), Positives = 31/69 (44%)
 Frame = +2

Query: 35  CILLCVXXXXXXXXXXPLPRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCS 214
           C+L  V          P    ++ I  FGDSLSDTG       G LP+ P  P    R S
Sbjct: 7   CLLGLVALTVQAADSRPA---FSRIVMFGDSLSDTGKMYSKMRGYLPSSP--PYYEGRFS 61

Query: 215 NGRLVIDFL 241
           NG + ++ L
Sbjct: 62  NGPVWLEQL 70



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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
 Frame = +1

Query: 55   RRLDGSGGGSVAAVLQRHFQLRRLL-IRHGQLRHHQLRQASQHAQVPAAVRPLLQRPSRH 231
            R  + S GG  A+    H Q R     RHG  RH Q   +S+H+ +P        R SRH
Sbjct: 3277 RHAETSSGGQAAS---SHEQARSSPGERHGS-RHQQSADSSRHSGIPRGQASSAVRDSRH 3332

Query: 232  RLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQ 366
                   GS        +GH  +   Q    G  +AGP     Q+
Sbjct: 3333 ------WGSSGSQASDSEGHSEESDTQ-SVSGHGQAGPHQQSHQE 3370



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>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 277 GEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEHPAVQH 393
           G+QG QL  G+Q +  G+ + G Q  QGQQ  +    QH
Sbjct: 588 GQQGQQLGQGQQGQQPGQGQQGQQPAQGQQGQQPGQGQH 626



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>YK27_YEAST (P36140) Hypothetical 12.3 kDa protein in GAP1-NAP1 intergenic|
           region
          Length = 101

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +1

Query: 85  VAAVLQRHFQLRRLLIRHGQLRHHQLRQASQHAQVPAAVRPLLQRPSRHRLPR 243
           V A  Q    LR++  RH   R H       H  +    RPLL RP R R+PR
Sbjct: 53  VPACQQNRLALRQIPRRHPPSRDH-------HLLLRLRPRPLLLRPPRTRIPR 98



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>Y2619_VIBPA (Q87LJ3) UPF0235 protein VP2619|
          Length = 96

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +1

Query: 7   HGEDERSIVVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLL--IRHGQLRHHQLRQASQH 180
           HGE+ +  +  P V     DG     +   L + F++ + L  I  G+L  H+  +    
Sbjct: 31  HGEELKIAITAPPV-----DGKANAHLTKFLAKQFKIAKGLVHIEKGELGRHKQIRIESP 85

Query: 181 AQVPAAVRPLL 213
            Q+PA V+ +L
Sbjct: 86  VQIPAEVKAIL 96



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>TITF1_CANFA (P43698) Thyroid transcription factor 1 (Thyroid nuclear factor 1)|
           (TTF-1) (Homeobox protein Nkx-2.1)
          Length = 371

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 23/75 (30%), Positives = 26/75 (34%)
 Frame = +1

Query: 139 GQLRHHQLRQASQHAQVPAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLR 318
           G L+ H  +QA Q AQ   A    +            VGS         GHQ     Q  
Sbjct: 280 GSLQGHAQQQAQQQAQAAQAAAAAIS-----------VGSGGPGLGAHPGHQPGSAGQSP 328

Query: 319 GDGRHRAGPQVLQGQ 363
               H A P  LQGQ
Sbjct: 329 DLAHHAASPAALQGQ 343



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>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic|
           region precursor
          Length = 592

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 25/82 (30%), Positives = 33/82 (40%)
 Frame = +2

Query: 89  PRYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLL 268
           P  Y+ +  FGDSLSD G F  +    L     + P       G+L ++     LG    
Sbjct: 25  PSPYSGMIVFGDSLSDAGQFGGVRFTNLDANGNYAPVSPMILGGQLGVN--PTELGPSTS 82

Query: 269 PPSANKGTNFSQGANFAVMGAT 334
           P   N       G N+AV G T
Sbjct: 83  P--LNPVLGLPDGNNWAVGGYT 102



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>SUR2_CAEEL (Q10669) Protein sur-2|
          Length = 1587

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 37/158 (23%), Positives = 56/158 (35%), Gaps = 25/158 (15%)
 Frame = +1

Query: 13   EDERSIVVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLLIRH----------GQLRHH-- 156
            E E+ +  H     + L+ +   S    +Q H Q   LL  H            L+HH  
Sbjct: 1399 EQEQHVKAH-----QPLESTPSVSSLPQMQHHLQQAPLLPSHQMMPPPQQHSSSLQHHLQ 1453

Query: 157  ------QLRQASQHAQVPAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLR 318
                  Q+   SQH  +        Q+  +H++P   +            HQ Q G Q  
Sbjct: 1454 HHTSTHQMMDTSQHQTIQQQSNHPTQQQLQHQIPNMSM------------HQ-QMGPQYP 1500

Query: 319  GD-GRHRAGP------QVLQGQQRVEHPAVQHFHELPA 411
            G    H +GP      Q   G    +HP + H  ++PA
Sbjct: 1501 GAVFHHPSGPVGHVPMQYGMGHHMQQHPHLPHHQQMPA 1538



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>HLDE_STRCO (Q9Z5B5) Bifunctional protein hldE [Includes: D-beta-D-heptose|
           7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose
           7-phosphotransferase); D-beta-D-heptose 1-phosphate
           adenosyltransferase (EC 2.7.7.-)]
          Length = 463

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -3

Query: 312 LAPWLKLVPLFADGGSSGTPNASARKSMTRRPLEQRAYGGGNL 184
           LAPWLKL+PL      +GT     R     RP+ +   GGG +
Sbjct: 87  LAPWLKLIPL----PLTGTVPEKTRVLAQDRPVVRLDRGGGRV 125



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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = +1

Query: 235 LPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRA-----GPQVLQGQQRVEHPAVQHFH 399
           +P  GV       VGE G Q +     R  GR R      G ++L GQ+ VEH    H H
Sbjct: 727 VPGPGVRVRRAEAVGEGGEQRREAAAARVPGRARGALGGLGAELLVGQRVVEH---HHAH 783

Query: 400 EL 405
            L
Sbjct: 784 VL 785



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>RNF5_CAEEL (Q09463) RING finger protein 5|
          Length = 235

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
 Frame = -3

Query: 342 SSAVAPITAKLAPWLKLVPLFADGGSSGTPNASARKSMTRRPLEQRA----------YGG 193
           ++ V P+        K+VP++  GG S  P    RK +  RP  QR+            G
Sbjct: 59  NNQVCPVCKSAIDGNKVVPIYGRGGDSSDP----RKKVPPRPKGQRSEPPPQSFAGFNWG 114

Query: 192 GNLGMLG 172
           G+ GM+G
Sbjct: 115 GDGGMMG 121



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>TITF1_RAT (P23441) Thyroid transcription factor 1 (Thyroid nuclear factor 1)|
           (TTF-1) (Homeobox protein Nkx-2.1)
          Length = 372

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 30/119 (25%), Positives = 39/119 (32%), Gaps = 20/119 (16%)
 Frame = +1

Query: 67  GSGGGSVAAVLQRHFQLRR-------LLIRHGQ-------------LRHHQLRQASQHAQ 186
           G GGG      Q+  Q +        +L++ G+             L+ H  +QA Q AQ
Sbjct: 237 GGGGGGAGCPQQQQAQQQSPRRVAVPVLVKDGKPCQAGAPAPGAASLQGHAQQQAQQQAQ 296

Query: 187 VPAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQ 363
              A    +            VGS         GHQ     Q      H A P  LQGQ
Sbjct: 297 AAQAAAAAIS-----------VGSGGAGLGAHPGHQPGSAGQSPDLAHHAASPAALQGQ 344



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>O2AP1_HUMAN (Q8NGE2) Olfactory receptor 2AP1 (Olfactory receptor OR12-9)|
          Length = 309

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +2

Query: 146 FVIINSGKLPNMPKFPPPYARCSNGRLVIDFLAEALGVPLLPPSANKGTNFSQGANFAVM 325
           F+I    KLP+  +    ++ CS+  +VI     +     + PSA +G  F++G    + 
Sbjct: 218 FIIKTILKLPSAQQRTKAFSTCSSHMIVISLSYGSCMFMYINPSAKEGDTFNKGVALLIT 277

Query: 326 GATAL 340
               L
Sbjct: 278 SVAPL 282



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>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 190 PAAVRPLLQRPSRHRLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDG 327
           PA V P  ++PS H  P     +     +G +   +   ++L GDG
Sbjct: 668 PAEVGPTTEKPSSHLPPTPRATTRQDSSLGGRARHMSSSQELLGDG 713



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>DPO3A_THEAQ (Q9XDH5) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1220

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 242 AEALGVPLLPPSANKGTNFSQGANFAVMGATAL 340
           A ALG+P+LPP  N+      G +F V+G   L
Sbjct: 861 ARALGIPVLPPDVNR-----SGFDFKVVGEEIL 888



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>GBF_DICDI (P36417) G-box-binding factor (GBF)|
          Length = 708

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
 Frame = +1

Query: 100 QRHFQLRRLLIRHGQLRHHQLRQ-ASQHAQVPAAVRPLLQRPSRHRLPRRGVGSXXXXXV 276
           Q+H Q  +    H Q++HHQL+Q   QH Q         Q+  +H+              
Sbjct: 166 QQHHQQMQQQQHHQQMQHHQLQQHQHQHQQ--------QQQQQQHQQQHH---------- 207

Query: 277 GEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEHPAVQHFHE 402
            +Q  Q Q   Q +   +H    Q  Q  Q+ +H   Q  H+
Sbjct: 208 QQQQQQQQQHHQQQQHHQHSQPQQQHQHNQQQQHQHNQQQHQ 249



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>RR4B_CYACA (O22029) Chloroplast 30S ribosomal protein S4|
          Length = 192

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 134 DTGNFVIINSGKLPNMPKFPPPYARCSNGRLVI 232
           +  + + + S   P  P++ PPY + SNG L +
Sbjct: 133 EVNHVIEVKSSSPPKPPEYLPPYLQLSNGTLTV 165



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>KTHY_TREPA (O83373) Putative thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 208

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 31  VVHPLVCGRRLDGSGGGSVAAVLQRHFQLRRLLI 132
           ++H  V    +DG+G  +    L+RHFQ R+ ++
Sbjct: 3   ILHNFVVFEGIDGTGTSTQLRALERHFQARKDMV 36



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>SYV_THEVO (Q97CR9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 790

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +2

Query: 92  RYYNAIFSFGDSLSDTGNFVIINSGKLPNMPKFPPPYARC 211
           RYY   F      SD GN V  +   LP  P+  PP  RC
Sbjct: 396 RYYGVPFPVW-YCSDCGNTVFADDKDLPVDPRLQPPSKRC 434



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>CORTO_DROME (P41046) Centrosomal and chromosomal factor (CCF)|
           (Chromocentrosomin)
          Length = 550

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 8/122 (6%)
 Frame = +1

Query: 70  SGGGSVAAVLQRHFQLRRLLIRHGQLRHH--QLRQASQHAQVPAAVRPLLQRPSR----- 228
           S G S  + LQ+  Q ++      Q +HH  Q +Q   HA V A  + LLQ+  +     
Sbjct: 16  SHGMSALSALQQQQQQQQQQHSQTQQQHHHQQQQQHMYHAAVAAHQQQLLQQQQQQQHHR 75

Query: 229 -HRLPRRGVGSXXXXXVGEQGHQLQPGRQLRGDGRHRAGPQVLQGQQRVEHPAVQHFHEL 405
            H  P     S           Q Q    +    + +   Q  Q QQ+ +  A  + +  
Sbjct: 76  HHHQPANTSSSSNSRHSHAAATQTQVAAAVANSRQQQQQQQQQQQQQQQQQTASSNSNAA 135

Query: 406 PA 411
           PA
Sbjct: 136 PA 137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,259,910
Number of Sequences: 219361
Number of extensions: 1146223
Number of successful extensions: 4188
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4167
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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