Clone Name | bart61e05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | BMP2_DAMDA (O19006) Bone morphogenetic protein 2 precursor (BMP-2) | 30 | 3.5 | 2 | BET2_CANAL (O93830) Type-2 proteins geranylgeranyltransferase be... | 30 | 3.5 |
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>BMP2_DAMDA (O19006) Bone morphogenetic protein 2 precursor (BMP-2)| Length = 396 Score = 29.6 bits (65), Expect = 3.5 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +2 Query: 125 TDSVLRWTAGGMRNHKKLLQFLRPDPAVAAA 217 T +V+RWTA G+ NH +++ P+ + A+ Sbjct: 210 TPAVMRWTAQGLTNHGFVVEVAHPEDSYGAS 240
>BET2_CANAL (O93830) Type-2 proteins geranylgeranyltransferase beta subunit (EC| 2.5.1.60) (Type II proteins geranylgeranyltransferase beta subunit) (Type II protein geranyl-geranyltransferase beta subunit) (GGTase-II-beta) (PGGT) (YPT1/SEC4 proteins geran Length = 341 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 Query: 368 DETGLLGSFVKEDGHVYSLAAA 433 D+TG GSF K DGH+ S +A Sbjct: 75 DKTGAFGSFPKHDGHILSTLSA 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,750,543 Number of Sequences: 219361 Number of extensions: 702708 Number of successful extensions: 2235 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2178 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2235 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)