ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BMP2_DAMDA (O19006) Bone morphogenetic protein 2 precursor (BMP-2) 30 3.5
2BET2_CANAL (O93830) Type-2 proteins geranylgeranyltransferase be... 30 3.5

>BMP2_DAMDA (O19006) Bone morphogenetic protein 2 precursor (BMP-2)|
          Length = 396

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 125 TDSVLRWTAGGMRNHKKLLQFLRPDPAVAAA 217
           T +V+RWTA G+ NH  +++   P+ +  A+
Sbjct: 210 TPAVMRWTAQGLTNHGFVVEVAHPEDSYGAS 240



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>BET2_CANAL (O93830) Type-2 proteins geranylgeranyltransferase beta subunit (EC|
           2.5.1.60) (Type II proteins geranylgeranyltransferase
           beta subunit) (Type II protein
           geranyl-geranyltransferase beta subunit)
           (GGTase-II-beta) (PGGT) (YPT1/SEC4 proteins geran
          Length = 341

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 368 DETGLLGSFVKEDGHVYSLAAA 433
           D+TG  GSF K DGH+ S  +A
Sbjct: 75  DKTGAFGSFPKHDGHILSTLSA 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,750,543
Number of Sequences: 219361
Number of extensions: 702708
Number of successful extensions: 2235
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2235
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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