Clone Information

BLAST Search Result

Clone Name	bart61e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)	36	0.055
2	MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-...	35	0.093
3	PACC_ASPOR (Q9HFB3) pH-response transcription factor pacC/RIM101	32	0.61
4	PACC_ASPPA (Q96UW0) pH-response transcription factor pacC/RIM101	32	1.0
5	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	32	1.0
6	CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity fa...	31	1.3
7	CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity fa...	31	1.3
8	ZO3_MOUSE (Q9QXY1) Tight junction protein ZO-3 (Zonula occludens...	31	1.3
9	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	31	1.3
10	CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity fact...	31	1.3
11	PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-pho...	31	1.8
12	P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor ...	31	1.8
13	DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (...	31	1.8
14	BRO1_NEUCR (Q7SAN9) Vacuolar protein-sorting protein bro-1 (BRO ...	30	2.3
15	FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog...	30	2.3
16	Y1161_DROME (Q9VNA4) Hypothetical protein CG1161	30	2.3
17	FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)	30	2.3
18	FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)	30	2.3
19	HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fr...	30	2.3
20	CAPU_DROME (Q24120) Protein cappuccino	30	3.0
21	SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30	30	3.0
22	SUS_DROME (P22293) Protein suppressor of sable	30	3.9
23	RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ra...	30	3.9
24	ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor e...	30	3.9
25	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	30	3.9
26	NIFA_AZOCA (P09133) Nif-specific regulatory protein	30	3.9
27	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	30	3.9
28	RANB9_MOUSE (P69566) Ran-binding protein 9 (RanBP9) (Ran-binding...	30	3.9
29	NFAC2_MOUSE (Q60591) Nuclear factor of activated T-cells, cytopl...	29	5.1
30	TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding prote...	29	5.1
31	GCC7_CAEEL (Q21770) Germ cell expressed protein R06C7.1	29	5.1
32	FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin h...	29	5.1
33	FBLI1_MOUSE (Q71FD7) Filamin-binding LIM protein 1 (CSX-associat...	29	5.1
34	ATCAY_MOUSE (Q8BHE3) Caytaxin	29	5.1
35	ATF5_MOUSE (O70191) Cyclic AMP-dependent transcription factor AT...	29	5.1
36	KLF2_RAT (Q9ET58) Krueppel-like factor 2 (Lung krueppel-like fac...	29	5.1
37	CD2L7_CAEEL (P46551) Putative cell division cycle 2-related prot...	29	5.1
38	WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)	29	5.1
39	CSPG4_HUMAN (Q6UVK1) Chondroitin sulfate proteoglycan 4 precurso...	29	5.1
40	CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protei...	29	6.7
41	ZYX_CHICK (Q04584) Zyxin	29	6.7
42	SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)	29	6.7
43	FMT_PROAC (Q6A8H1) Methionyl-tRNA formyltransferase (EC 2.1.2.9)	29	6.7
44	POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Proteas...	28	8.7
45	GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, su...	28	8.7
46	NOLA1_XENTR (Q5RJV1) H/ACA ribonucleoprotein complex subunit 1-l...	28	8.7
47	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	28	8.7
48	K1H6_HUMAN (O76013) Keratin, type I cuticular Ha6 (Hair keratin,...	28	8.7
49	PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101	28	8.7
50	EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear a...	28	8.7
51	EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear ...	28	8.7
52	CTK1_RABIT (P49659) Voltage independent pH-sensitive potassium c...	28	8.7
53	DOF51_ARATH (Q9LZ56) Dof zinc finger protein DOF5.1 (AtDOF5.1)	28	8.7

>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)|
          Length = 582

 Score = 35.8 bits (81), Expect = 0.055
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PP P PP   A+S +  P  ASPG  R  PP+  P
Sbjct: 34  PPPPPPPGPGAASASAAPPTASPGPERKPPPASAP 68

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>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 15/70 (21%)
 Frame = +3

Query: 3   RHHPPSPTPP---------------AKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGG 137
           R + PSP PP               A L SS+    + + P  H SS P  DP L  C  
Sbjct: 206 RGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASSSPPSDPPLFHCSD 265

Query: 138 AILAGFIPPS 167
           A+    +PPS
Sbjct: 266 ALTPPPLPPS 275

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>PACC_ASPOR (Q9HFB3) pH-response transcription factor pacC/RIM101|
          Length = 662

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 6   HHPPSPTPPAKLASSITVPPVLASPGRHR-SSPPSLDP 116
           H PPS  PP+   ++ +  P++A+P  H  +  P+L P
Sbjct: 379 HSPPSQLPPSHATATTSAGPIMANPATHSPTGTPALTP 416

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>PACC_ASPPA (Q96UW0) pH-response transcription factor pacC/RIM101|
          Length = 662

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 6   HHPPSPTPPAKLASSITVPPVLASPGRHR-SSPPSLDP 116
           H PPS  PP+   ++ +  P++A+P  H  +  P+L P
Sbjct: 379 HSPPSQLPPSHATATTSAGPMMANPATHSPTGTPALTP 416

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 27  PPAKLASSITVPPVLASPGRHRSSPPSLDPQL--AMCGGAILAGFIPPS 167
           PP   AS  + PPV   P    S+PPSL P    ++  GA  A  +PPS
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGG 137
           PP P P +  A SI +PP      + RS+PP   P+ A   G
Sbjct: 338 PPPPPPRSNAAGSIPLPP------QGRSAPPPPPPRSAPSTG 373

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>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7|
          Length = 471

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRH----RSSPPSLDPQLAMCGGAILAGFIPPS 167
           PP   PP  L+SS  VPP    PG H       PP L P LA+       G IPP+
Sbjct: 239 PPPIPPPPPLSSSFGVPP--PPPGIHYQHLMPPPPRLPPHLAVPP----PGAIPPA 288

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>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7|
           (Cleavage and polyadenylation specificity factor 59 kDa
           subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor
           Im 59-kDa subunit)
          Length = 471

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRH----RSSPPSLDPQLAMCGGAILAGFIPPS 167
           PP   PP  L+SS  VPP    PG H       PP L P LA+       G IPP+
Sbjct: 239 PPPIPPPPPLSSSFGVPP--PPPGIHYQHLMPPPPRLPPHLAVPP----PGAIPPA 288

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>ZO3_MOUSE (Q9QXY1) Tight junction protein ZO-3 (Zonula occludens 3 protein)|
           (Zona occludens 3 protein) (Tight junction protein 3)
          Length = 905

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = -2

Query: 143 DGSAAHGELWIKGGRARSVPAGR----GEHGRHSDGGG 42
           D S+  G  W  G R+R   AGR    G HGR S GGG
Sbjct: 125 DSSSGSGRSW--GERSRRSRAGRRGRVGSHGRRSSGGG 160

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 12  PPSPTPPAKL-ASSITVPPVLASPGRHRSSPPSLDP 116
           PPSP+PP+ +  S   VPP  A P    S PPS  P
Sbjct: 305 PPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAP 340



 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PPSP+PP   + S   PPV  SP     +PPS  P
Sbjct: 152 PPSPSPPVPPSPS---PPVPPSPAPPSPTPPSPSP 183



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PPSP PP   + +   PP  A P     +PPS  P
Sbjct: 204 PPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSP 238



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PPSP PP+  + +   PP  A P     +PPS  P
Sbjct: 212 PPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVP 246



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PPSPTPP+    S  VPP  A P      PPS  P
Sbjct: 173 PPSPTPPSP---SPPVPPSPAPPSPAPPVPPSPAP 204



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PPSP PP+    S   PP  A P     +PPS  P
Sbjct: 98  PPSPAPPSPAPPS-PAPPSPAPPSPPSPAPPSPSP 131



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PPSP PP+    S   PP  A P     SPPS  P
Sbjct: 93  PPSPAPPSPAPPS-PAPPSPAPPSPAPPSPPSPAP 126



 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVP-PVLASPGRHRSSPPS 107
           PPSP PP+    S   P P   SPG    +PPS
Sbjct: 45  PPSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPS 77



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 12  PPSPTPPAKLASS--ITVPPVLASPGRHRSSPP 104
           PPSP+PPA  + S     PP+  SP     SPP
Sbjct: 126 PPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPP 158

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>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7|
          Length = 462

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRH----RSSPPSLDPQLAMCGGAILAGFIPPS 167
           PP   PP  L+SS  VPP    PG H       PP L P LA+       G IPP+
Sbjct: 230 PPPIPPPPPLSSSFGVPP--PPPGIHYQHLMPPPPRLPPHLAVPP----PGAIPPA 279

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>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +3

Query: 18  SPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMC 131
           SPT    + SS TVPP L  P R  S  PS  P  + C
Sbjct: 325 SPTFRPGIPSSQTVPPPLRKPPRSPSRSPSRSPNRSPC 362

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>P53_CHICK (P10360) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 367

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGG 137
           PP P PP  L  +   PP L  P   R++P  + P     GG
Sbjct: 49  PPPPPPPPPLPLAAAAPPPLNPPTPPRAAPSPVVPSTEDYGG 90

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>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 9/43 (20%)
 Frame = +3

Query: 3   RHHPPSPTPPAKLASSITVP---------PVLASPGRHRSSPP 104
           R  PPSPT   +L  S  +P         P + SPG H  +PP
Sbjct: 758 RSPPPSPTTQRRLTLSAPLPRPASSRGPAPAIPSPGPHSGAPP 800

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>BRO1_NEUCR (Q7SAN9) Vacuolar protein-sorting protein bro-1 (BRO|
            domain-containing protein 1)
          Length = 1012

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 9    HPPSPTPPAKLASSITVPPVLASPGRHRS-SPPSLDPQLAMCGGAILAGFIPP 164
            HP SP PP + + + + P  L + G   + +P    PQ +  GG +  GF+PP
Sbjct: 884  HPASP-PPTQTSFAQSRPYSLTTYGNPSALNPQGGQPQQSQPGGYVPPGFVPP 935

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>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)|
           (Translocated in liposarcoma protein) (POMp75) (75 kDa
           DNA-pairing protein)
          Length = 526

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 110 KGGRARSVPAGRGEHGRHSDGGGELCGRSG 21
           +GGR R  P GRG +G    GGG   GR G
Sbjct: 383 RGGRGRGGPMGRGGYGGGGSGGG---GRGG 409

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>Y1161_DROME (Q9VNA4) Hypothetical protein CG1161|
          Length = 227

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +3

Query: 15  PSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGGAIL 146
           P+  PPAK+       PVLA+PG++ S+  S      +C GA+L
Sbjct: 68  PTAAPPAKVIGQ----PVLAAPGKNSSNSSSTTE--CVCAGALL 105

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>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)|
          Length = 518

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 110 KGGRARSVPAGRGEHGRHSDGGGELCGRSG 21
           +GGR R  P GRG +G    GGG   GR G
Sbjct: 376 RGGRGRGGPMGRGGYGGGGSGGG---GRGG 402

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>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)|
          Length = 512

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -2

Query: 110 KGGRARSVPAGRGEHGRHSDGGGELCGRSG 21
           +GGR R  P GRG +G    GGG   GR G
Sbjct: 369 RGGRGRGGPMGRGGYGGGGSGGG---GRGG 395

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>HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fragment)|
          Length = 152

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +3

Query: 30  PAKLASSITVP-PVLASPGRHRSSPPSLDPQL 122
           P K+A S  VP P   S GR R  PP + PQL
Sbjct: 114 PKKVARSPAVPSPTAVSTGRPRGRPPKVKPQL 145

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>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGGAI 143
           PP P PP  LA+    PP    P    S+PP   P     GG I
Sbjct: 505 PPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGI 548

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>SOX30_MOUSE (Q8CGW4) Transcription factor SOX-30|
          Length = 782

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 22/57 (38%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGR----HRSSPPSLDPQLAM------CGGAILAG 152
           PP PTPP  L  +    PV A+  R     RS  PS     AM      CG A  AG
Sbjct: 19  PPRPTPPRPLRPAPPAQPVEAATFRAAAAERSQSPSAQATAAMAAVASSCGEAAAAG 75

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>SUS_DROME (P22293) Protein suppressor of sable|
          Length = 1325

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 163 GGMNPARMAPPHMASCGSREGGLDRCL-PGEASTGGTVMEEASFAGGVGDGG 11
           GG  P   A P ++SCG R  G D  +  G A+TG         A G+G GG
Sbjct: 200 GGSPPPGGAAPPLSSCGQRFSGADWDMDDGSAATG---------AAGLGAGG 242

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>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding|
           protein M) (RanBPM) (BPM90) (BPM-L)
          Length = 729

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
 Frame = +3

Query: 9   HPPSPTPPAKLASSITVPP-----VLASPGRHRSSPPSLDPQLAMCGGA 140
           HPP P PPA  A     PP       A+P     +PP L       GGA
Sbjct: 70  HPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGA 118

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>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           P +PTPP     S T+PP   +P  +R+ PPS  P
Sbjct: 524 PSAPTPPIPSPPS-TLPPPPQAPPPNRAPPPSRPP 557

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>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +3

Query: 18  SPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMC 131
           SPT    + S+ TVPP L  P R  S  PS  P  + C
Sbjct: 325 SPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRSPC 362

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>NIFA_AZOCA (P09133) Nif-specific regulatory protein|
          Length = 615

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
 Frame = +3

Query: 6   HHPPSPTP--PAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGGAILAGFIPP 164
           H PP+PTP  P   A   T  P  ASP       P+ D     C G      +PP
Sbjct: 520 HVPPAPTPLTPLSPAPLATAAPAAASPA------PAADSLPVTCPGTEACPAVPP 568

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           P +PTPP     S T+PP   +P  +R+ PPS  P
Sbjct: 526 PSAPTPPIPSPPS-TLPPPPQAPPPNRAPPPSRPP 559

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>RANB9_MOUSE (P69566) Ran-binding protein 9 (RanBP9) (Ran-binding protein M)|
          (RanBPM) (B cell antigen receptor Ig beta-associated
          protein 1) (IBAP-1)
          Length = 653

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 3  RHHPPSPTPPAKLASSITVPPVLA-SPG 83
          +  PP P PPA  A+  T PP LA  PG
Sbjct: 11 QQQPPPPPPPASAAAPATAPPGLAVGPG 38

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>NFAC2_MOUSE (Q60591) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell|
           transcription factor NFAT1) (NFAT pre-existing subunit)
           (NF-ATp)
          Length = 1064

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 11/62 (17%)
 Frame = +3

Query: 9   HPPSPTPPAKLAS-----------SITVPPVLASPGRHRSSPPSLDPQLAMCGGAILAGF 155
           H P P P ++ +S           ++  P   ASP R RS  P   P +A    +I AG+
Sbjct: 237 HSPVPRPASRSSSPGAKRRHSCAEALVAPLPAASPQRSRSPSPQPSPHVAPQDDSIPAGY 296

Query: 156 IP 161
            P
Sbjct: 297 PP 298

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>TRX2_MOUSE (O08550) Trithorax homolog 2 (WW domain-binding protein 7)|
           (Fragment)
          Length = 290

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPP 104
           PP P+PP  L    T PP  ASP     SPP
Sbjct: 45  PPVPSPPPPLPPPSTSPPPPASPLPPPVSPP 75

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>GCC7_CAEEL (Q21770) Germ cell expressed protein R06C7.1|
          Length = 945

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = +3

Query: 9   HPPSPTPPAKLASSITVPPVLASPGRHRSSPP 104
           HPP P PP        +PPV A PG     PP
Sbjct: 4   HPPQPHPPMP-----PMPPVTAPPGAMTPMPP 30

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>FHOD1_MOUSE (Q6P9Q4) FH1/FH2 domain-containing protein (Formin homolog|
           overexpressed in spleen) (FHOS) (Formin homology 2
           domain-containing protein 1)
          Length = 1196

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRH 89
           PP P PP  +  S   PP LA+P  H
Sbjct: 618 PPPPPPPPPIIGSCPPPPPLAAPFTH 643

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>FBLI1_MOUSE (Q71FD7) Filamin-binding LIM protein 1 (CSX-associated LIM)|
          Length = 375

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +3

Query: 6   HHPPSPTPPAKLA----SSITVPPVLASPGRHRSSPPSLDP 116
           H PP P PP   A    SS+  PP  A P      PP  +P
Sbjct: 132 HLPPPPPPPPPQAPSKGSSVHPPPGHARPSEEELPPPPEEP 172

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>ATCAY_MOUSE (Q8BHE3) Caytaxin|
          Length = 372

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = -2

Query: 158 DESREDGSAAHGELWIKGGRARSVPAGRGEH 66
           D S EDGSAA+G LW      R+V  G  EH
Sbjct: 140 DGSAEDGSAANGRLW------RTVIIGEQEH 164

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>ATF5_MOUSE (O70191) Cyclic AMP-dependent transcription factor ATF-5|
           (Activating transcription factor 5-alpha/beta)
           (Transcription factor ATFx) (Transcription factor-like
           protein ODA-10) (BZIP protein ATF7) (NRIF3-associated
           protein) (NAP1)
          Length = 283

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLD 113
           PPSP PP   A++ ++P  L  P      PP+LD
Sbjct: 124 PPSPPPPPPPAAAPSLPLPLPLPTFDLPQPPTLD 157

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>KLF2_RAT (Q9ET58) Krueppel-like factor 2 (Lung krueppel-like factor)|
          Length = 351

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +3

Query: 3   RHHPPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGGAILAGFIPPS 167
           R  PPS TPP     S   PP L +PG     PP   P  +  G      + PP+
Sbjct: 164 RPPPPSDTPPL----SPDGPPRLPAPGPRNPFPPPFGPGPSFGGPGPALHYGPPA 214

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>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7|
           (EC 2.7.11.22)
          Length = 730

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/51 (33%), Positives = 19/51 (37%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGGAILAGFIPP 164
           PP P PP    S    PP    P      PPS+D   A      L+   PP
Sbjct: 207 PPPPLPPN---SQFMTPPPRPPPAPFSIPPPSVDIHFAATASFSLSSIPPP 254

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>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)|
          Length = 520

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = +3

Query: 3   RHHPPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDPQLAMCGGAILAGFIPP 164
           R  PP P PPA   S    PP+  + G     PP   P    C G   +G  PP
Sbjct: 381 RGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPPPPCPG---SGPAPP 431

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>CSPG4_HUMAN (Q6UVK1) Chondroitin sulfate proteoglycan 4 precursor (Chondroitin|
            sulfate proteoglycan NG2) (Melanoma chondroitin sulfate
            proteoglycan) (Melanoma-associated chondroitin sulfate
            proteoglycan)
          Length = 2322

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = +3

Query: 27   PPAKLASSITVPP-----VLASPGRHRSSPPSLDPQLAMCGGAILAG 152
            PPA +  S+  PP     V+ S G     PPSLDP  +    A+  G
Sbjct: 1270 PPADIVFSVKSPPSAGYLVMVSRGALADEPPSLDPVQSFSQEAVDTG 1316

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>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)|
          Length = 1403

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 6   HHPPSPTPPAKLASSITVPPVLASPGRHRS 95
           HH P P PPA L +  + PP   S   H S
Sbjct: 169 HHQPPPPPPASLPAP-SAPPTSGSSSSHNS 197

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>ZYX_CHICK (Q04584) Zyxin|
          Length = 542

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPG 83
           PP P+ P++  +  T PPV +SPG
Sbjct: 213 PPPPSLPSQPTAKFTPPPVASSPG 236

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>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)|
          Length = 586

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASPGRHRSSPPSLDP 116
           PP+P P A  AS+ T     ASPG  R  PP+  P
Sbjct: 35  PPAPGPGAATASAATSA---ASPGPERRPPPAQAP 66

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>FMT_PROAC (Q6A8H1) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 315

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
 Frame = +3

Query: 3   RHHPPSPTPPAKLASSITVPPVLAS---PGRHRSSPPSLDPQLAMC---GGAILAGFI 158
           RH  P P P AK A  + +P + A+    G    +  SLD  +A+    GG I A  +
Sbjct: 40  RHRTPRPCPVAKAAEELGIPAIKATSVKSGEGHDAITSLDADVAVVVAYGGLIPADLL 97

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>POLN_RUBVT (P13889) Nonstructural polyprotein [Contains: Protease (EC|
           3.4.22.-) (p150); RNA-directed RNA polymerase/helicase
           (EC 2.7.7.48) (EC 3.6.1.-) (p90)]
          Length = 2115

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVLASP 80
           PP+P+PPA   +   VPP+ A P
Sbjct: 755 PPAPSPPAPPRAGDPVPPIPAGP 777

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>GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, subunit 2|
           precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2)
           (GABABR2) (G-protein coupled receptor 51) (HG20)
          Length = 941

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +3

Query: 12  PPSPTPPAKLASSITVPPVL-ASPG-----RHRSSPPSLDPQLAMCG 134
           PP P PPA+L   + +P +L  +PG     R    PP   P L++ G
Sbjct: 14  PPPPPPPARLLLLLLLPLLLPLAPGAWGWARGAPRPPPSSPPLSIMG 60

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>NOLA1_XENTR (Q5RJV1) H/ACA ribonucleoprotein complex subunit 1-like protein|
          Length = 218

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 107 GGRARSVPAGRGEHGRHSDGGGELCGRSGGW 15
           GGR      GRG  G    GGG   GR GG+
Sbjct: 164 GGRGGGRGGGRGRGGGRGGGGGFRGGRGGGF 194

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>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4)
          Length = 1147

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 15  PSPTPPAKLASSITVPPVLASPGRHRSSPP 104
           P P PP  + + ITVPP    P  H+  PP
Sbjct: 663 PVPVPPIPVPAPITVPPPQVPP--HQPGPP 690

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>K1H6_HUMAN (O76013) Keratin, type I cuticular Ha6 (Hair keratin, type I Ha6)|
          Length = 467

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 139 APPHMASCGSREGGLDRCLPGEASTGGTVMEEASFAGGVGDGGWW 5
           A  +++S  S   GL  CLPG       +  E   +G VG GGW+
Sbjct: 45  AAGYISSARSGLSGLGSCLPGSY-----LSSECHTSGFVGSGGWF 84

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>PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101|
          Length = 678

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 6   HHPPSPTPPAKLASSITVPPVLASPGRH--RSSPPSLDP 116
           H PP+  P A   +  T  P++++   H   SS P+L P
Sbjct: 384 HSPPTQLPSAHATTQTTAGPIISNTSAHSPSSSTPALTP 422

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>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2)
          Length = 487

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 12  PPSPTPPAKL-ASSITVPPVLASPGRHRSSPPS 107
           PP PTPP  L  +++TVPP    P R  + PP+
Sbjct: 197 PPRPTPPTPLPPATLTVPP---RPTRPTTLPPT 226

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>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2) (EBNA2)
          Length = 451

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 12  PPSPTPPAKL-ASSITVPPVLASPGRHRSSPPS 107
           PP PTPP  L  +++TVPP    P R  + PP+
Sbjct: 163 PPRPTPPTPLPPATLTVPP---RPTRPTTLPPT 192

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>CTK1_RABIT (P49659) Voltage independent pH-sensitive potassium channel|
           (RACTK1)
          Length = 284

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 163 GGMNPARMAPPHMASCGSREGGLDRC 86
           GG+ P  ++P H+A+  S  GG+  C
Sbjct: 128 GGIRPCAISPRHLAAASSDSGGIRPC 153

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>DOF51_ARATH (Q9LZ56) Dof zinc finger protein DOF5.1 (AtDOF5.1)|
          Length = 399

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = -2

Query: 116 WIKGGRARSVPAG----RGEHGRHSDGGG 42
           W +GG  RSVP G    R +  ++S GGG
Sbjct: 129 WTRGGALRSVPVGGGCRRNKRTKNSSGGG 157


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,921,142
Number of Sequences: 219361
Number of extensions: 577415
Number of successful extensions: 4537
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4342
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result