ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACTG_ANSAN (P63256) Actin, cytoplasmic 2 (Gamma-actin) 28 2.1

>ACTG_ANSAN (P63256) Actin, cytoplasmic 2 (Gamma-actin)|
          Length = 375

 Score = 27.7 bits (60), Expect(2) = 2.1
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 2  GRDDAPRAVFP 34
          GRDDAPRAVFP
Sbjct: 22 GRDDAPRAVFP 32



 Score = 20.8 bits (42), Expect(2) = 2.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 33 PSIVGRPR 56
          PSIVGRPR
Sbjct: 32 PSIVGRPR 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,940,715
Number of Sequences: 219361
Number of extensions: 60099
Number of successful extensions: 650
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 80,573,946
effective HSP length: 0
effective length of database: 80,573,946
effective search space used: 1933774704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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