ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart61d02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 341 bits (172), Expect = 1e-90 Identities = 214/228 (93%) Strand = Plus / Minus Query: 209 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 268 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27522071 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 27522012 Query: 269 gcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagtt 328 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 27522011 gcgcaaccaccggccgccgctggagctgtcgcggtgcagcggcgcgcacgtgctggagtt 27521952 Query: 329 cctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttctt 388 |||||| ||||| ||||||||||| || || ||||| |||||| |||| ||||||||||| Sbjct: 27521951 cctccggtacctggaccagttcgggaagacgaaggtgcacgccgcggggtgccccttctt 27521892 Query: 389 cggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 27521891 cggccacccctcgccgccggcgccgtgcccgtgcccgctccgccaggc 27521844 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 378 tgccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggcc 437 |||||||||| || |||||| |||||||||||| ||||||||||| ||| |||| ||| Sbjct: 21135176 tgccccttctacgaccaccccaacccgccggcgccatgcccgtgccctctctgccaagcc 21135117 Query: 438 tg 439 || Sbjct: 21135116 tg 21135115 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || | |||||| ||||||||||||| ||||||| |||| Sbjct: 20250238 gccacccctcactgccggcaccgtgcccgtgcctgctccgcgaggc 20250193
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 341 bits (172), Expect = 1e-90 Identities = 214/228 (93%) Strand = Plus / Minus Query: 209 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 268 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 91629 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 91570 Query: 269 gcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagtt 328 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 91569 gcgcaaccaccggccgccgctggagctgtcgcggtgcagcggcgcgcacgtgctggagtt 91510 Query: 329 cctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttctt 388 |||||| ||||| ||||||||||| || || ||||| |||||| |||| ||||||||||| Sbjct: 91509 cctccggtacctggaccagttcgggaagacgaaggtgcacgccgcggggtgccccttctt 91450 Query: 389 cggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 91449 cggccacccctcgccgccggcgccgtgcccgtgcccgctccgccaggc 91402
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 341 bits (172), Expect = 1e-90 Identities = 214/228 (93%) Strand = Plus / Minus Query: 209 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 268 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141140 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 141081 Query: 269 gcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagtt 328 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 141080 gcgcaaccaccggccgccgctggagctgtcgcggtgcagcggcgcgcacgtgctggagtt 141021 Query: 329 cctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttctt 388 |||||| ||||| ||||||||||| || || ||||| |||||| |||| ||||||||||| Sbjct: 141020 cctccggtacctggaccagttcgggaagacgaaggtgcacgccgcggggtgccccttctt 140961 Query: 389 cggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 140960 cggccacccctcgccgccggcgccgtgcccgtgcccgctccgccaggc 140913
>dbj|AK068794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162N11, full insert sequence Length = 1225 Score = 341 bits (172), Expect = 1e-90 Identities = 214/228 (93%) Strand = Plus / Plus Query: 209 gcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 268 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 197 gcggccgagcaggtacgagtcgcagaagcggcgggactggcacacgttcgggcagtacct 256 Query: 269 gcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagtt 328 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 257 gcgcaaccaccggccgccgctggagctgtcgcggtgcagcggcgcgcacgtgctggagtt 316 Query: 329 cctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttctt 388 |||||| ||||| ||||||||||| || || ||||| |||||| |||| ||||||||||| Sbjct: 317 cctccggtacctggaccagttcgggaagacgaaggtgcacgccgcggggtgccccttctt 376 Query: 389 cggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 377 cggccacccctcgccgccggcgccgtgcccgtgcccgctccgccaggc 424
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 313 bits (158), Expect = 3e-82 Identities = 209/226 (92%) Strand = Plus / Plus Query: 211 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 270 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 3595431 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 3595490 Query: 271 gcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcc 330 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 3595491 gcaaccaccggccgccgctggagctctcccggtgcagcggcgcgcacgtgctggagttcc 3595550 Query: 331 tccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcg 390 |||| ||||| ||||||||||| || || ||||| ||||||| |||||||||||||||| Sbjct: 3595551 tccggtacctggaccagttcgggaagacgaaggtgcacgcccatggctgccccttcttcg 3595610 Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 3595611 gccacccctcgccgccggcgccgtgcccctgcccgctccgccaggc 3595656 Score = 232 bits (117), Expect = 8e-58 Identities = 198/225 (88%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 24849678 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 24849619 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| |||||||||| |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 24849618 gaaccaccggccgccgctggggctcgcgcagtgcagcggcgcgcacgtgctggagttcct 24849559 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||| || || ||||||||||| || || ||||| ||| | ||| |||||||||||||| Sbjct: 24849558 ccggtatctggaccagttcgggaagacgaaggtgcacacggcggcgtgccccttcttcgg 24849499 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 24849498 ccacccgaacccgccggcgccgtgcccctgcccgctgcgccaggc 24849454 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 34707383 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 34707324 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 34707323 ccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaa 34707264 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||| | ||||||||||| || || ||||| ||| | |||| |||||||||| |||||| Sbjct: 34707263 gtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggcca 34707204 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 ||| |||||||||||| |||||||||||||||||||| ||||| Sbjct: 34707203 ccccaacccgccggcgccatgcccgtgcccgctccgccaagcctg 34707159 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctctc 22 |||||||||||||||||||||| Sbjct: 9041215 ctcctccccctctttccctctc 9041236
>dbj|AP004863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0023I17 Length = 141852 Score = 313 bits (158), Expect = 3e-82 Identities = 209/226 (92%) Strand = Plus / Plus Query: 211 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 270 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 140226 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 140285 Query: 271 gcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcc 330 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 140286 gcaaccaccggccgccgctggagctctcccggtgcagcggcgcgcacgtgctggagttcc 140345 Query: 331 tccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcg 390 |||| ||||| ||||||||||| || || ||||| ||||||| |||||||||||||||| Sbjct: 140346 tccggtacctggaccagttcgggaagacgaaggtgcacgcccatggctgccccttcttcg 140405 Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 140406 gccacccctcgccgccggcgccgtgcccctgcccgctccgccaggc 140451
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 313 bits (158), Expect = 3e-82 Identities = 209/226 (92%) Strand = Plus / Plus Query: 211 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 270 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 76721 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 76780 Query: 271 gcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcc 330 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 76781 gcaaccaccggccgccgctggagctctcccggtgcagcggcgcgcacgtgctggagttcc 76840 Query: 331 tccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcg 390 |||| ||||| ||||||||||| || || ||||| ||||||| |||||||||||||||| Sbjct: 76841 tccggtacctggaccagttcgggaagacgaaggtgcacgcccatggctgccccttcttcg 76900 Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 76901 gccacccctcgccgccggcgccgtgcccctgcccgctccgccaggc 76946
>dbj|AK106854.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B06, full insert sequence Length = 1923 Score = 313 bits (158), Expect = 3e-82 Identities = 209/226 (92%) Strand = Plus / Plus Query: 211 ggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgc 270 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 1005 ggccgagcaggtacgagtcgcagaagcggcgggactggcagacgttcgggcagtatctgc 1064 Query: 271 gcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcc 330 |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 1065 gcaaccaccggccgccgctggagctctcccggtgcagcggcgcgcacgtgctggagttcc 1124 Query: 331 tccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcg 390 |||| ||||| ||||||||||| || || ||||| ||||||| |||||||||||||||| Sbjct: 1125 tccggtacctggaccagttcgggaagacgaaggtgcacgcccatggctgccccttcttcg 1184 Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || ||||||||||||||||| ||||||||||||||||| Sbjct: 1185 gccacccctcgccgccggcgccgtgcccctgcccgctccgccaggc 1230
>ref|NM_197012.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0055P24.1), mRNA Length = 615 Score = 287 bits (145), Expect = 2e-74 Identities = 205/225 (91%) Strand = Plus / Plus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 111 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 170 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 ||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct: 171 caaccaccggccgccgctgtcgctggcgcggtgcagcggcgcgcacgtcctggagttcct 230 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 231 ccgctacctggaccagttcggcaagaccaaggtgcacgcgccggcgtgccccttcttcgg 290 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 291 ccacccggcgccgccggcgccgtgcccgtgcccgcttcgccaggc 335
>gb|AY596538.1| Saccharum officinarum clone SCCCRZ2C04A03, complete sequence Length = 1227 Score = 287 bits (145), Expect = 2e-74 Identities = 205/225 (91%) Strand = Plus / Plus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 309 gccgagccggtacgagtcgcagaagcgccgggactggaacacgttcgggcagtacctgcg 368 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||||||||||||| || |||| ||||||||||| |||||||| |||||||| Sbjct: 369 gaaccaccgcccgccgctgtccctggcgcgctgcagcggcgcgcacgtgctcgagttcct 428 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||| Sbjct: 429 gcgctacctcgaccagttcggcaagaccaaggtgcacaccccggcctgccccttcttcgg 488 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 489 ccacccggcgccgccggcgccctgcccgtgcccgctccgccaggc 533
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 287 bits (145), Expect = 2e-74 Identities = 205/225 (91%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 17374037 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 17373978 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 ||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct: 17373977 caaccaccggccgccgctgtcgctggcgcggtgcagcggcgcgcacgtcctggagttcct 17373918 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 17373917 ccgctacctggaccagttcggcaagaccaaggtgcacgcgccggcgtgccccttcttcgg 17373858 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 17373857 ccacccggcgccgccggcgccgtgcccgtgcccgcttcgccaggc 17373813 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 393 cacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 19472558 cacccttcgcctccggcgccgtgcccgtgcctgctccgccaggc 19472601
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 287 bits (145), Expect = 2e-74 Identities = 205/225 (91%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 3032 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 2973 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 ||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct: 2972 caaccaccggccgccgctgtcgctggcgcggtgcagcggcgcgcacgtcctggagttcct 2913 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 2912 ccgctacctggaccagttcggcaagaccaaggtgcacgcgccggcgtgccccttcttcgg 2853 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 2852 ccacccggcgccgccggcgccgtgcccgtgcccgcttcgccaggc 2808
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 287 bits (145), Expect = 2e-74 Identities = 205/225 (91%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| || Sbjct: 17383077 gccgagcaggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctccg 17383018 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 ||||||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||| Sbjct: 17383017 caaccaccggccgccgctgtcgctggcgcggtgcagcggcgcgcacgtcctggagttcct 17382958 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||||| |||| |||||||||||||| Sbjct: 17382957 ccgctacctggaccagttcggcaagaccaaggtgcacgcgccggcgtgccccttcttcgg 17382898 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 17382897 ccacccggcgccgccggcgccgtgcccgtgcccgcttcgccaggc 17382853 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 393 cacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 19483834 cacccttcgcctccggcgccgtgcccgtgcctgctccgccaggc 19483877
>ref|XM_473175.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 254 bits (128), Expect = 2e-64 Identities = 203/228 (89%) Strand = Plus / Plus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| || |||||| |||||||||||||||||||||| Sbjct: 114 gccgagccggtacgaggcgcagaagcggcgcgactggaacacgttcgggcagtacctgcg 173 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| ||||||||| ||| ||| |||||||||||| ||||| ||||||||||| Sbjct: 174 gaaccaccggccgccgctgagcctcgcgcagtgcagcggcgcgcacgtcctggagttcct 233 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||| || ||| |||||||||||||| Sbjct: 234 ccgctacctggaccagttcggcaagaccaaggtgcacaccgcggcgtgccccttcttcgg 293 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 |||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 294 ccacccgagcccgccggcgccgtgcccctgcccgctccgccaggcctg 341
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 254 bits (128), Expect = 2e-64 Identities = 203/228 (89%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| || |||||| |||||||||||||||||||||| Sbjct: 25764180 gccgagccggtacgaggcgcagaagcggcgcgactggaacacgttcgggcagtacctgcg 25764121 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| ||||||||| ||| ||| |||||||||||| ||||| ||||||||||| Sbjct: 25764120 gaaccaccggccgccgctgagcctcgcgcagtgcagcggcgcgcacgtcctggagttcct 25764061 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||| || ||| |||||||||||||| Sbjct: 25764060 ccgctacctggaccagttcggcaagaccaaggtgcacaccgcggcgtgccccttcttcgg 25764001 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 |||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 25764000 ccacccgagcccgccggcgccgtgcccctgcccgctccgccaggcctg 25763953
>emb|AL731630.2|OSJN00273 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072M01, complete sequence Length = 127712 Score = 254 bits (128), Expect = 2e-64 Identities = 203/228 (89%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| || |||||| |||||||||||||||||||||| Sbjct: 87106 gccgagccggtacgaggcgcagaagcggcgcgactggaacacgttcgggcagtacctgcg 87047 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| ||||||||| ||| ||| |||||||||||| ||||| ||||||||||| Sbjct: 87046 gaaccaccggccgccgctgagcctcgcgcagtgcagcggcgcgcacgtcctggagttcct 86987 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||||||||| |||||||||||||| |||||||| ||| || ||| |||||||||||||| Sbjct: 86986 ccgctacctggaccagttcggcaagaccaaggtgcacaccgcggcgtgccccttcttcgg 86927 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 |||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 86926 ccacccgagcccgccggcgccgtgcccctgcccgctccgccaggcctg 86879
>ref|XM_466818.1| Oryza sativa (japonica cultivar-group), mRNA Length = 762 Score = 232 bits (117), Expect = 8e-58 Identities = 198/225 (88%) Strand = Plus / Plus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 273 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 332 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| |||||||||| |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 333 gaaccaccggccgccgctggggctcgcgcagtgcagcggcgcgcacgtgctggagttcct 392 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||| || || ||||||||||| || || ||||| ||| | ||| |||||||||||||| Sbjct: 393 ccggtatctggaccagttcgggaagacgaaggtgcacacggcggcgtgccccttcttcgg 452 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 453 ccacccgaacccgccggcgccgtgcccctgcccgctgcgccaggc 497
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 232 bits (117), Expect = 8e-58 Identities = 198/225 (88%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10961 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 10902 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| |||||||||| |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 10901 gaaccaccggccgccgctggggctcgcgcagtgcagcggcgcgcacgtgctggagttcct 10842 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||| || || ||||||||||| || || ||||| ||| | ||| |||||||||||||| Sbjct: 10841 ccggtatctggaccagttcgggaagacgaaggtgcacacggcggcgtgccccttcttcgg 10782 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 10781 ccacccgaacccgccggcgccgtgcccctgcccgctgcgccaggc 10737
>dbj|AP006847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa148N02 Length = 36400 Score = 232 bits (117), Expect = 8e-58 Identities = 198/225 (88%) Strand = Plus / Minus Query: 212 gccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcg 271 ||||||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 14677 gccgagccggtacgaggcgcagaagcggcgggactggaacacgttcgggcagtacctgcg 14618 Query: 272 caaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcct 331 |||||||| |||||||||| |||| ||| |||||||||||| ||||||||||||||||| Sbjct: 14617 gaaccaccggccgccgctggggctcgcgcagtgcagcggcgcgcacgtgctggagttcct 14558 Query: 332 ccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 ||| || || ||||||||||| || || ||||| ||| | ||| |||||||||||||| Sbjct: 14557 ccggtatctggaccagttcgggaagacgaaggtgcacacggcggcgtgccccttcttcgg 14498 Query: 392 ccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||| |||||||||||||||||| |||||||| |||||||| Sbjct: 14497 ccacccgaacccgccggcgccgtgcccctgcccgctgcgccaggc 14453
>ref|XM_468337.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 234 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 293 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 294 ccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaa 353 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||| | ||||||||||| || || ||||| ||| | |||| |||||||||| |||||| Sbjct: 354 gtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggcca 413 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 ||| |||||||||||| |||||||||||||||||||| ||||| Sbjct: 414 ccccaacccgccggcgccatgcccgtgcccgctccgccaagcctg 458
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 25231 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 25172 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 25171 ccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaa 25112 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||| | ||||||||||| || || ||||| ||| | |||| |||||||||| |||||| Sbjct: 25111 gtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggcca 25052 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 ||| |||||||||||| |||||||||||||||||||| ||||| Sbjct: 25051 ccccaacccgccggcgccatgcccgtgcccgctccgccaagcctg 25007
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 64334 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 64275 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 64274 ccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaa 64215 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||| | ||||||||||| || || ||||| ||| | |||| |||||||||| |||||| Sbjct: 64214 gtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggcca 64155 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 ||| |||||||||||| |||||||||||||||||||| ||||| Sbjct: 64154 ccccaacccgccggcgccatgcccgtgcccgctccgccaagcctg 64110
>dbj|AK111446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B03, full insert sequence Length = 1587 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 735 gagccggtacgagtcgcagaagcggcgggactggaacacgttcgggcagtacctgcggaa 794 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct: 795 ccaccggccgccgctgtccctgtcgcggtgcagcggcgcgcacgtgctggagttcctcaa 854 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||| | ||||||||||| || || ||||| ||| | |||| |||||||||| |||||| Sbjct: 855 gtacatggaccagttcgggaagacgaaggtgcacacgccggtgtgccccttctacggcca 914 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggcctg 439 ||| |||||||||||| |||||||||||||||||||| ||||| Sbjct: 915 ccccaacccgccggcgccatgcccgtgcccgctccgccaagcctg 959
>ref|NM_190427.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 639 Score = 178 bits (90), Expect = 1e-41 Identities = 189/222 (85%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || Sbjct: 87 gagcaggtacgagtcgcagaagcggagggactggaacacgttcctgcagtacctgcggaa 146 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| ||| |||||||||||||||| |||||| | |||||||| | Sbjct: 147 ccaccggccgccgctgacgctggcgcggtgcagcggcgcgcacgtgatcgagttcctgag 206 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||||| ||||||||||| || |||||||| ||||| |||| ||| |||||| |||||| Sbjct: 207 gtacctggaccagttcgggaagaccaaggtgcacgcgtcggggtgcgccttctacggcca 266 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 || |||||||| |||||||||||||||||| || ||||| Sbjct: 267 gcccagcccgccggggccgtgcccgtgcccgctgcgtcaggc 308
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 178 bits (90), Expect = 1e-41 Identities = 189/222 (85%) Strand = Plus / Minus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || Sbjct: 35467506 gagcaggtacgagtcgcagaagcggagggactggaacacgttcctgcagtacctgcggaa 35467447 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| ||| |||||||||||||||| |||||| | |||||||| | Sbjct: 35467446 ccaccggccgccgctgacgctggcgcggtgcagcggcgcgcacgtgatcgagttcctgag 35467387 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||||| ||||||||||| || |||||||| ||||| |||| ||| |||||| |||||| Sbjct: 35467386 gtacctggaccagttcgggaagaccaaggtgcacgcgtcggggtgcgccttctacggcca 35467327 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 || |||||||| |||||||||||||||||| || ||||| Sbjct: 35467326 gcccagcccgccggggccgtgcccgtgcccgctgcgtcaggc 35467285 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 403 cgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||||||| || |||||||||||||||||||| Sbjct: 31157992 cgccggcgccatggccgtgcccgctccgccaggc 31158025
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 178 bits (90), Expect = 1e-41 Identities = 189/222 (85%) Strand = Plus / Minus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||||||||||||||||||||||| |||||||| |||||||| |||||||||||| || Sbjct: 91455 gagcaggtacgagtcgcagaagcggagggactggaacacgttcctgcagtacctgcggaa 91396 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| ||| |||||||||||||||| |||||| | |||||||| | Sbjct: 91395 ccaccggccgccgctgacgctggcgcggtgcagcggcgcgcacgtgatcgagttcctgag 91336 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||||| ||||||||||| || |||||||| ||||| |||| ||| |||||| |||||| Sbjct: 91335 gtacctggaccagttcgggaagaccaaggtgcacgcgtcggggtgcgccttctacggcca 91276 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 || |||||||| |||||||||||||||||| || ||||| Sbjct: 91275 gcccagcccgccggggccgtgcccgtgcccgctgcgtcaggc 91234
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 161 bits (81), Expect = 2e-36 Identities = 198/237 (83%) Strand = Plus / Minus Query: 200 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 259 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 75499 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 75440 Query: 260 gcagtacctgcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgt 319 |||||||||||| |||||| ||||||||| ||| |||||||||||||||| ||||| Sbjct: 75439 gcagtacctgcggaaccacaagccgccgctgacgctgccgcggtgcagcggcgcgcacgt 75380 Query: 320 gctggagttcctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctg 379 | ||||||||| ||||| ||||||||||| || |||||||| |||||| || || Sbjct: 75379 catcgagttcctcaagtacctggaccagttcgggaagaccaaggtgcacgccgacgggtg 75320 Query: 380 ccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 | ||| ||||||| | || |||||||||||||||| | ||||||||||||||||| Sbjct: 75319 cgcctacttcggcgagcccaacccgccggcgccgtgcgcctgcccgctccgccaggc 75263
>gb|AC144742.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0052F16, complete sequence Length = 162082 Score = 161 bits (81), Expect = 2e-36 Identities = 198/237 (83%) Strand = Plus / Minus Query: 200 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 259 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 19495 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 19436 Query: 260 gcagtacctgcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgt 319 |||||||||||| |||||| ||||||||| ||| |||||||||||||||| ||||| Sbjct: 19435 gcagtacctgcggaaccacaagccgccgctgacgctgccgcggtgcagcggcgcgcacgt 19376 Query: 320 gctggagttcctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctg 379 | ||||||||| ||||| ||||||||||| || |||||||| |||||| || || Sbjct: 19375 catcgagttcctcaagtacctggaccagttcgggaagaccaaggtgcacgccgacgggtg 19316 Query: 380 ccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 | ||| ||||||| | || |||||||||||||||| | ||||||||||||||||| Sbjct: 19315 cgcctacttcggcgagcccaacccgccggcgccgtgcgcctgcccgctccgccaggc 19259
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 161 bits (81), Expect = 2e-36 Identities = 198/237 (83%) Strand = Plus / Minus Query: 200 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 259 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 16228142 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 16228083 Query: 260 gcagtacctgcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgt 319 |||||||||||| |||||| ||||||||| ||| |||||||||||||||| ||||| Sbjct: 16228082 gcagtacctgcggaaccacaagccgccgctgacgctgccgcggtgcagcggcgcgcacgt 16228023 Query: 320 gctggagttcctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctg 379 | ||||||||| ||||| ||||||||||| || |||||||| |||||| || || Sbjct: 16228022 catcgagttcctcaagtacctggaccagttcgggaagaccaaggtgcacgccgacgggtg 16227963 Query: 380 ccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 | ||| ||||||| | || |||||||||||||||| | ||||||||||||||||| Sbjct: 16227962 cgcctacttcggcgagcccaacccgccggcgccgtgcgcctgcccgctccgccaggc 16227906 Score = 131 bits (66), Expect = 2e-27 Identities = 183/222 (82%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||||||||||||||||||||| | |||||||| |||||||| |||||||||| || Sbjct: 23033142 gagcaggtacgagtcgcagaagaggagggactggaacacgttcctgcagtacctgaagaa 23033201 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| ||| || ||||||||||||| ||||| | ||||||||| Sbjct: 23033202 ccaccggccgccgctgacgctggcgaggtgcagcggcgcgcacgtcatcgagttcctcaa 23033261 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||||| || |||||||| || || ||||| ||||| |||| ||| ||| || |||||| Sbjct: 23033262 gtacctggatcagttcgggaagacgaaggtgcacgcgtcggggtgcgcctactacggcca 23033321 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 || ||||||||||||||||||||||||||| |||||||| Sbjct: 23033322 gccgagcccgccggcgccgtgcccgtgcccgctgcgccaggc 23033363 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || ||||| ||| |||||||||||||||||||||||| Sbjct: 15644225 gccacccctcgccgccaacgctgtgcccgtgcccgctccgccaggc 15644180
>dbj|AK106384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E04, full insert sequence Length = 1236 Score = 161 bits (81), Expect = 2e-36 Identities = 198/237 (83%) Strand = Plus / Plus Query: 200 ggcggcggtgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgg 259 |||||||| | ||| |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 294 ggcggcggcggggctgagcaggtacgagtcgcagaagcggcgggactggaacacgttcct 353 Query: 260 gcagtacctgcgcaaccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgt 319 |||||||||||| |||||| ||||||||| ||| |||||||||||||||| ||||| Sbjct: 354 gcagtacctgcggaaccacaagccgccgctgacgctgccgcggtgcagcggcgcgcacgt 413 Query: 320 gctggagttcctccgctacctcgaccagttcggcaaaaccaaggtccacgccccgggctg 379 | ||||||||| ||||| ||||||||||| || |||||||| |||||| || || Sbjct: 414 catcgagttcctcaagtacctggaccagttcgggaagaccaaggtgcacgccgacgggtg 473 Query: 380 ccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 | ||| ||||||| | || |||||||||||||||| | ||||||||||||||||| Sbjct: 474 cgcctacttcggcgagcccaacccgccggcgccgtgcgcctgcccgctccgccaggc 530
>ref|XM_476596.1| Oryza sativa (japonica cultivar-group), mRNA Length = 831 Score = 137 bits (69), Expect = 3e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Plus Query: 208 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 267 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 59 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 118 Query: 268 tgcgcaac-caccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggag 326 | ||| | |||||||||||||| |||||| || ||||||||||||||||| || ||| Sbjct: 119 t-cgccgcgcaccgcccgccgctcgagctccgccgctgcagcggcgcccacgtcctcgag 177 Query: 327 ttcctccgctacctcgaccagttcggcaa 355 ||||||||||||||||||| |||||||| Sbjct: 178 ttcctccgctacctcgaccgcttcggcaa 206
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 137 bits (69), Expect = 3e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 208 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 267 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 2100268 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 2100209 Query: 268 tgcgcaac-caccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggag 326 | ||| | |||||||||||||| |||||| || ||||||||||||||||| || ||| Sbjct: 2100208 t-cgccgcgcaccgcccgccgctcgagctccgccgctgcagcggcgcccacgtcctcgag 2100150 Query: 327 ttcctccgctacctcgaccagttcggcaa 355 ||||||||||||||||||| |||||||| Sbjct: 2100149 ttcctccgctacctcgaccgcttcggcaa 2100121 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tcgatctctctctccctccacggc 98 |||||||||||||| ||||||||| Sbjct: 16792130 tcgatctctctctctctccacggc 16792107
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 137 bits (69), Expect = 3e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 208 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 267 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 184565 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 184506 Query: 268 tgcgcaac-caccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggag 326 | ||| | |||||||||||||| |||||| || ||||||||||||||||| || ||| Sbjct: 184505 t-cgccgcgcaccgcccgccgctcgagctccgccgctgcagcggcgcccacgtcctcgag 184447 Query: 327 ttcctccgctacctcgaccagttcggcaa 355 ||||||||||||||||||| |||||||| Sbjct: 184446 ttcctccgctacctcgaccgcttcggcaa 184418
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 137 bits (69), Expect = 3e-29 Identities = 131/149 (87%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 208 tgcggccgagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacc 267 ||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 56061 tgcggccgagccggtacgagtcgcagaagcgccgggactggcagaccttcacgcagtacc 56002 Query: 268 tgcgcaac-caccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggag 326 | ||| | |||||||||||||| |||||| || ||||||||||||||||| || ||| Sbjct: 56001 t-cgccgcgcaccgcccgccgctcgagctccgccgctgcagcggcgcccacgtcctcgag 55943 Query: 327 ttcctccgctacctcgaccagttcggcaa 355 ||||||||||||||||||| |||||||| Sbjct: 55942 ttcctccgctacctcgaccgcttcggcaa 55914
>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02, complete sequence Length = 147407 Score = 131 bits (66), Expect = 2e-27 Identities = 183/222 (82%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||||||||||||||||||||| | |||||||| |||||||| |||||||||| || Sbjct: 95622 gagcaggtacgagtcgcagaagaggagggactggaacacgttcctgcagtacctgaagaa 95681 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| ||| || ||||||||||||| ||||| | ||||||||| Sbjct: 95682 ccaccggccgccgctgacgctggcgaggtgcagcggcgcgcacgtcatcgagttcctcaa 95741 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||||| || |||||||| || || ||||| ||||| |||| ||| ||| || |||||| Sbjct: 95742 gtacctggatcagttcgggaagacgaaggtgcacgcgtcggggtgcgcctactacggcca 95801 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 || ||||||||||||||||||||||||||| |||||||| Sbjct: 95802 gccgagcccgccggcgccgtgcccgtgcccgctgcgccaggc 95843
>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052E20, complete sequence Length = 162434 Score = 131 bits (66), Expect = 2e-27 Identities = 183/222 (82%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacctgcgcaa 274 |||||||||||||||||||||| | |||||||| |||||||| |||||||||| || Sbjct: 137155 gagcaggtacgagtcgcagaagaggagggactggaacacgttcctgcagtacctgaagaa 137214 Query: 275 ccaccgcccgccgctggagctctcgcggtgcagcggcgcccacgtgctggagttcctccg 334 |||||| ||||||||| ||| || ||||||||||||| ||||| | ||||||||| Sbjct: 137215 ccaccggccgccgctgacgctggcgaggtgcagcggcgcgcacgtcatcgagttcctcaa 137274 Query: 335 ctacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcggcca 394 ||||| || |||||||| || || ||||| ||||| |||| ||| ||| || |||||| Sbjct: 137275 gtacctggatcagttcgggaagacgaaggtgcacgcgtcggggtgcgcctactacggcca 137334 Query: 395 cccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 || ||||||||||||||||||||||||||| |||||||| Sbjct: 137335 gccgagcccgccggcgccgtgcccgtgcccgctgcgccaggc 137376
>gb|AC182655.2| Populus trichocarpa clone Pop1-121O5, complete sequence Length = 87839 Score = 89.7 bits (45), Expect = 7e-15 Identities = 168/209 (80%) Strand = Plus / Plus Query: 231 cagaagcgccgggactggcacacgttcgggcagtacctgcgcaaccaccgcccgccgctg 290 |||||||| || |||||| |||| || || || ||||| || ||||||||||| || || Sbjct: 44642 cagaagcggcgagactggaacacctttggccaatacctccggaaccaccgcccccctctc 44701 Query: 291 gagctctcgcggtgcagcggcgcccacgtgctggagttcctccgctacctcgaccagttc 350 ||||| |||||||| || |||||||| || |||||| | || ||||| || ||||| Sbjct: 44702 tccctctcccggtgcagtggggcccacgtcctcgagttcttgcgttaccttgatcagttt 44761 Query: 351 ggcaaaaccaaggtccacgccccgggctgccccttcttcggccacccttccccgccggcg 410 || |||||||| |||||| ||| |||||||||||| |||||||| ||||| || Sbjct: 44762 ggaaaaaccaaagtccacacccaactctgccccttctttggccacccgaatccgcctgca 44821 Query: 411 ccgtgcccgtgcccgctccgccaggcctg 439 |||||||||||||| |||||||||||||| Sbjct: 44822 ccgtgcccgtgccctctccgccaggcctg 44850
>ref|NM_122732.1| Arabidopsis thaliana unknown protein AT5G28490 mRNA, complete cds Length = 573 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 306 agcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaac 358 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 160 agcggcgcacacgtgctcgagttcctccgctaccttgaccagttcgggaaaac 212
>gb|AY319947.1| Arabidopsis thaliana light-dependent short hypocotyl 1 (LSH1) mRNA, complete cds Length = 743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 306 agcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaac 358 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 160 agcggcgcacacgtgctcgagttcctccgctaccttgaccagttcgggaaaac 212
>gb|BT011304.1| Arabidopsis thaliana At5g28490 gene, complete cds Length = 573 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 306 agcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaac 358 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 160 agcggcgcacacgtgctcgagttcctccgctaccttgaccagttcgggaaaac 212
>gb|BT010821.1| Arabidopsis thaliana At5g28490 mRNA, complete cds Length = 756 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 306 agcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaac 358 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 243 agcggcgcacacgtgctcgagttcctccgctaccttgaccagttcgggaaaac 295
>gb|AF262039.1|F24J2 Arabidopsis thaliana BAC F24J2 Length = 80472 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 306 agcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaac 358 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||| Sbjct: 65998 agcggcgcacacgtgctcgagttcctccgctaccttgaccagttcgggaaaac 65946
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 318 gtgctggagttcctccgctacctcgaccagttcggcaaaaccaagg 363 ||||| |||||||||||||||||||| ||||||||||| ||||||| Sbjct: 11996818 gtgctcgagttcctccgctacctcgatcagttcggcaagaccaagg 11996773 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 75 tcgatctctctctccctccacggcaggccg 104 |||||||||||||| ||||||||| ||||| Sbjct: 4846006 tcgatctctctctctctccacggccggccg 4845977
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 318 gtgctggagttcctccgctacctcgaccagttcggcaaaaccaagg 363 ||||| |||||||||||||||||||| ||||||||||| ||||||| Sbjct: 101298 gtgctcgagttcctccgctacctcgatcagttcggcaagaccaagg 101253
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 393 cacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||||| || ||||||||||||||||||| |||||||||||| Sbjct: 100424 cacccttcgcctccggcgccgtgcccgtgcctgctccgccaggc 100467
>ref|XM_480523.1| Oryza sativa (japonica cultivar-group), mRNA Length = 666 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || |||| |||||||||||| ||||||||||||||||| Sbjct: 80 gccacccctcgccgctggcgccgtgcccatgcccgctccgccaggc 125
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || | ||||||||| ||||||||||||||||||||||| Sbjct: 30869919 gccacccctcgcagccggcgccatgcccgtgcccgctccgccaggc 30869874
>gb|AC120509.3| Oryza sativa chromosome 3 BAC OSJNBb0081K01 genomic sequence, complete sequence Length = 122496 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || | ||||||||| ||||||||||||||||||||||| Sbjct: 73171 gccacccctcgcagccggcgccatgcccgtgcccgctccgccaggc 73216
>gb|AY013245.2| Oryza sativa (japonica cultivar-group) chromosome 3 BAC 36I5, partial sequence Length = 65547 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || | ||||||||| ||||||||||||||||||||||| Sbjct: 47908 gccacccctcgcagccggcgccatgcccgtgcccgctccgccaggc 47863
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || |||| |||||||||||| ||||||||||||||||| Sbjct: 5574366 gccacccctcgccgctggcgccgtgcccatgcccgctccgccaggc 5574411 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 405 ccggcgccgtgcccgtgcccgctccgccaggc 436 |||| |||||||||||||| ||||||||||| Sbjct: 9024929 ccggtgccgtgcccgtgccttctccgccaggc 9024898
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || | ||||||||| ||||||||||||||||||||||| Sbjct: 30960442 gccacccctcgcagccggcgccatgcccgtgcccgctccgccaggc 30960397
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || |||| |||||||||||| ||||||||||||||||| Sbjct: 29742 gccacccctcgccgctggcgccgtgcccatgcccgctccgccaggc 29787
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || |||| |||||||||||| ||||||||||||||||| Sbjct: 100594 gccacccctcgccgctggcgccgtgcccatgcccgctccgccaggc 100639
>ref|NM_191178.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 403 cgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||||||| || |||||||||||||||||||| Sbjct: 248 cgccggcgccatggccgtgcccgctccgccaggc 281
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || ||||| ||| |||||||||||||||||||||||| Sbjct: 36329 gccacccctcgccgccaacgctgtgcccgtgcccgctccgccaggc 36284
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 403 cgccggcgccgtgcccgtgcccgctccgccaggc 436 |||||||||| || |||||||||||||||||||| Sbjct: 84337 cgccggcgccatggccgtgcccgctccgccaggc 84370
>dbj|AP003762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456F09 Length = 141336 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 378 tgccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggcc 437 |||||||||| || |||||| |||||||||||| ||||||||||| ||| |||| ||| Sbjct: 33837 tgccccttctacgaccaccccaacccgccggcgccatgcccgtgccctctctgccaagcc 33778 Query: 438 tg 439 || Sbjct: 33777 tg 33776
>dbj|AP003713.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E12 Length = 139750 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 378 tgccccttcttcggccacccttccccgccggcgccgtgcccgtgcccgctccgccaggcc 437 |||||||||| || |||||| |||||||||||| ||||||||||| ||| |||| ||| Sbjct: 132177 tgccccttctacgaccaccccaacccgccggcgccatgcccgtgccctctctgccaagcc 132118 Query: 438 tg 439 || Sbjct: 132117 tg 132116
>emb|AJ718871.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC22-2-270, cultivar Bright Yellow 2 Length = 224 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 324 gagttcctccgctacctcgaccagttcggcaaaaccaaggt 364 ||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 123 gagttcctccgatacctggaccagttcgggaaaactaaggt 163
>ref|NM_100583.2| Arabidopsis thaliana unknown protein AT1G07090 mRNA, complete cds Length = 943 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 310 tacctcgaccagttcggtaagaccaaagtccacg 343
>ref|NM_128672.1| Arabidopsis thaliana unknown protein AT2G31160 mRNA, complete cds Length = 935 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 315 cacgtgctggagttcctccgctacctcgaccagttcgg 352 |||||||| ||||||||||| ||| | ||||||||||| Sbjct: 348 cacgtgctcgagttcctccgttacttggaccagttcgg 385
>ref|NM_111322.1| Arabidopsis thaliana unknown protein AT3G04510 mRNA, complete cds Length = 606 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Plus Query: 303 tgcagcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaaccaag 362 ||||| ||||| ||||| || || || || || ||||| ||||| |||||||||||||| Sbjct: 181 tgcagtggcgcacacgtcctcgattttctgcgttaccttgaccaattcggcaaaaccaaa 240 Query: 363 gtccac 368 |||||| Sbjct: 241 gtccac 246
>gb|BT020303.1| Arabidopsis thaliana At1g07090 gene, complete cds Length = 606 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 223 tacctcgaccagttcggtaagaccaaagtccacg 256
>gb|AY017831.1| Oryza sativa microsatellite MRG0156 containing (AG)X13, closest to marker C980, genomic sequence Length = 226 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ctcctccccctctttccctctc 22 |||||||||||||||||||||| Sbjct: 171 ctcctccccctctttccctctc 150
>gb|AY630774.1| Arabidopsis thaliana hypothetical protein (At3G04510) mRNA, complete cds Length = 1353 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Plus Query: 303 tgcagcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaaccaag 362 ||||| ||||| ||||| || || || || || ||||| ||||| |||||||||||||| Sbjct: 722 tgcagtggcgcacacgtcctcgattttctgcgttaccttgaccaattcggcaaaaccaaa 781 Query: 363 gtccac 368 |||||| Sbjct: 782 gtccac 787
>gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC T27C4 genomic sequence, complete sequence Length = 71616 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Minus Query: 303 tgcagcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaaccaag 362 ||||| ||||| ||||| || || || || || ||||| ||||| |||||||||||||| Sbjct: 61074 tgcagtggcgcacacgtcctcgattttctgcgttaccttgaccaattcggcaaaaccaaa 61015 Query: 363 gtccac 368 |||||| Sbjct: 61014 gtccac 61009
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 cggcaggccggcgtcgtcgatc 116 |||||||||||||||||||||| Sbjct: 1681406 cggcaggccggcgtcgtcgatc 1681385
>gb|AC005311.3| Arabidopsis thaliana chromosome 2 clone T16B12 map m283, complete sequence Length = 82594 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 315 cacgtgctggagttcctccgctacctcgaccagttcgg 352 |||||||| ||||||||||| ||| | ||||||||||| Sbjct: 11036 cacgtgctcgagttcctccgttacttggaccagttcgg 10999
>gb|AY081705.1| Arabidopsis thaliana At2g31160/T16B12.3 mRNA, complete cds Length = 660 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 315 cacgtgctggagttcctccgctacctcgaccagttcgg 352 |||||||| ||||||||||| ||| | ||||||||||| Sbjct: 256 cacgtgctcgagttcctccgttacttggaccagttcgg 293
>gb|BT024584.1| Arabidopsis thaliana At1g07090 mRNA, complete cds Length = 591 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 208 tacctcgaccagttcggtaagaccaaagtccacg 241
>gb|AY056383.1| Arabidopsis thaliana At2g31160/T16B12.3 mRNA, complete cds Length = 935 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 315 cacgtgctggagttcctccgctacctcgaccagttcgg 352 |||||||| ||||||||||| ||| | ||||||||||| Sbjct: 348 cacgtgctcgagttcctccgttacttggaccagttcgg 385
>emb|BX817235.1|CNS0AD3X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZF03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1755 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 227 tacctcgaccagttcggtaagaccaaagtccacg 260
>emb|BX816115.1|CNS0AD6Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZB06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1759 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 229 tacctcgaccagttcggtaagaccaaagtccacg 262
>emb|BX817497.1|CNS0ACQA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL26ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 814 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 304 tacctcgaccagttcggtaagaccaaagtccacg 337
>gb|AC067971.5|F10K1 Sequence of BAC F10K1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111464 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 66975 tacctcgaccagttcggtaagaccaaagtccacg 67008
>gb|BT003842.1| Arabidopsis thaliana clone RAFL15-26-N13 (R20570) unknown protein (At1g07090) mRNA, complete cds Length = 814 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 284 tacctcgaccagttcggtaagaccaaagtccacg 317
>gb|AY086869.1| Arabidopsis thaliana clone 28780 mRNA, complete sequence Length = 815 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacg 369 ||||||||||||||||| || ||||| ||||||| Sbjct: 311 tacctcgaccagttcggtaagaccaaagtccacg 344
>dbj|AP005466.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1212_H09 Length = 129040 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Minus Query: 391 gccacccttccccgccggcgccgtgcccgtgcccgctccgccaggc 436 ||||||| || | |||||| ||||||||||||| ||||||| |||| Sbjct: 63748 gccacccctcactgccggcaccgtgcccgtgcctgctccgcgaggc 63703
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 75 tcgatctctctctccctccacggcaggccg 104 |||||||||||||| ||||||||| ||||| Sbjct: 28538 tcgatctctctctctctccacggccggccg 28509
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctctc 22 |||||||||||||||||||||| Sbjct: 81661 ctcctccccctctttccctctc 81682
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctctc 22 |||||||||||||||||||||| Sbjct: 113824 ctcctccccctctttccctctc 113845
>gb|AY924763.1| Arabidopsis thaliana hypothetical protein (At3g04510) gene, complete cds Length = 606 Score = 44.1 bits (22), Expect = 0.38 Identities = 55/66 (83%) Strand = Plus / Plus Query: 303 tgcagcggcgcccacgtgctggagttcctccgctacctcgaccagttcggcaaaaccaag 362 ||||| ||||| ||||| || || || || || ||||| ||||| |||||||||||||| Sbjct: 181 tgcagtggcgcacacgtcctcgattttctgcgttaccttgaccaattcggcaaaaccaaa 240 Query: 363 gtccac 368 |||||| Sbjct: 241 gtccac 246
>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete sequence Length = 192196 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 ctcctccccctctttccctctc 22 |||||||||||||||||||||| Sbjct: 69205 ctcctccccctctttccctctc 69184
>ref|NM_180043.1| Arabidopsis thaliana unknown protein AT2G42610 transcript variant AT2G42610.2 mRNA, complete cds Length = 989 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 164 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 208
>ref|NM_129822.2| Arabidopsis thaliana unknown protein AT2G42610 transcript variant AT2G42610.1 mRNA, complete cds Length = 999 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 164 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 208
>ref|XM_523597.1| PREDICTED: Pan troglodytes similar to amiloride-sensitive cation channel 1, neuronal (degenerin), two different splice products: MDEG1 and MDEG2; ASIC2a/ASIC2b; Amiloride-sensitive cation channel 1 neuronal (degenerin) two different splice products: MDEG1 and MDEG2; Amilorid... (LOC468206), mRNA Length = 2697 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 cagcccgggggcggctgaggcggcg 206 ||||||||||||||| ||||||||| Sbjct: 109 cagcccgggggcggcagaggcggcg 133
>ref|NM_183377.1| Homo sapiens amiloride-sensitive cation channel 1, neuronal (degenerin) (ACCN1), transcript variant 1, mRNA Length = 3470 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 cagcccgggggcggctgaggcggcg 206 ||||||||||||||| ||||||||| Sbjct: 982 cagcccgggggcggcagaggcggcg 1006
>ref|XM_515553.1| PREDICTED: Pan troglodytes similar to MGC22014 protein (LOC459329), mRNA Length = 5520 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gccgtgcccgtgcccgctccgccag 434 ||||||||||||||| ||||||||| Sbjct: 5302 gccgtgcccgtgccctctccgccag 5278
>gb|AY497393.1| Populus balsamifera subsp. trichocarpa microsatellite ORPM_206 sequence Length = 667 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 336 tacctcgaccagttcggcaaaaccaaggtccac 368 ||||| ||||| |||||||||||||| |||||| Sbjct: 547 tacctagaccaattcggcaaaaccaaagtccac 515
>ref|XM_882884.1| PREDICTED: Bos taurus hypothetical protein LOC617497 (LOC617497), mRNA Length = 225 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 cgggggcggctgaggcggcgg 207 ||||||||||||||||||||| Sbjct: 171 cgggggcggctgaggcggcgg 151
>emb|CR956406.10| Pig DNA sequence from clone CH242-143L3 on chromosome 17, complete sequence Length = 177073 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 ctccctccacggcaggccggc 106 ||||||||||||||||||||| Sbjct: 81133 ctccctccacggcaggccggc 81113
>gb|AC122447.4| Mus musculus BAC clone RP24-240O5 from chromosome 9, complete sequence Length = 158058 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctct 21 ||||||||||||||||||||| Sbjct: 69583 ctcctccccctctttccctct 69603
>gb|BC022243.1| Homo sapiens hypothetical protein MGC22014, mRNA (cDNA clone MGC:22014 IMAGE:4400878), complete cds Length = 3251 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gccgtgcccgtgcccgctccgccag 434 ||||||||||||||| ||||||||| Sbjct: 2626 gccgtgcccgtgccctctccgccag 2602
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 cggcgccgtgcccgtgcccgc 426 ||||||||||||||||||||| Sbjct: 2112057 cggcgccgtgcccgtgcccgc 2112077 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gcaggccggcgtcgtcgatc 116 |||||||||||||||||||| Sbjct: 3470710 gcaggccggcgtcgtcgatc 3470729
>emb|AL834182.1|HSM805478 Homo sapiens mRNA; cDNA DKFZp761M1724 (from clone DKFZp761M1724) Length = 3470 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 cagcccgggggcggctgaggcggcg 206 ||||||||||||||| ||||||||| Sbjct: 982 cagcccgggggcggcagaggcggcg 1006
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 37747 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 37703
>ref|XM_942026.1| PREDICTED: Homo sapiens hypothetical protein MGC22014 (MGC22014), mRNA Length = 6037 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gccgtgcccgtgcccgctccgccag 434 ||||||||||||||| ||||||||| Sbjct: 4945 gccgtgcccgtgccctctccgccag 4921
>ref|XM_371501.3| PREDICTED: Homo sapiens hypothetical protein MGC22014 (MGC22014), mRNA Length = 6073 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gccgtgcccgtgcccgctccgccag 434 ||||||||||||||| ||||||||| Sbjct: 4981 gccgtgcccgtgccctctccgccag 4957
>gb|AC025898.10| Homo sapiens chromosome 17, clone RP11-421O15, complete sequence Length = 184875 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 cagcccgggggcggctgaggcggcg 206 ||||||||||||||| ||||||||| Sbjct: 125753 cagcccgggggcggcagaggcggcg 125729
>dbj|AK164968.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130014L21 product:RNA binding motif protein 5, full insert sequence Length = 3176 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 tctgaggtcaaagcaggagga 151 ||||||||||||||||||||| Sbjct: 1335 tctgaggtcaaagcaggagga 1355
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 tctgaggtcaaagcaggagga 151 ||||||||||||||||||||| Sbjct: 81370 tctgaggtcaaagcaggagga 81390
>gb|AC008834.7| Homo sapiens chromosome 5 clone CTD-2147G20, complete sequence Length = 191096 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ctcctccccctctttccctct 21 ||||||||||||||||||||| Sbjct: 133814 ctcctccccctctttccctct 133794
>emb|BX819693.1|CNS0AA0L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2405 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 141 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 185
>gb|AC073263.5| Homo sapiens BAC clone RP11-287D1 from 2, complete sequence Length = 183279 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gccgtgcccgtgcccgctccgccag 434 ||||||||||||||| ||||||||| Sbjct: 30441 gccgtgcccgtgccctctccgccag 30417
>gb|BT003740.1| Arabidopsis thaliana At2g42610 mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 76 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 120
>dbj|AK119048.1| Arabidopsis thaliana At2g42610 mRNA for unknown protein, complete cds, clone: RAFL21-38-B17 Length = 908 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 164 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 208
>dbj|AK118714.1| Arabidopsis thaliana At2g42610 mRNA for unknown protein, complete cds, clone: RAFL21-02-J18 Length = 944 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 157 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 201
>gb|AF218765.1|AF218765 Arabidopsis thaliana 177 protein mRNA, complete cds Length = 910 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 222 tacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 ||||||||||||||| | || |||||| |||| ||||| |||||| Sbjct: 150 tacgagtcgcagaagagacgtgactggaacactttcggacagtac 194
>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete sequence Length = 182503 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 tctgaggtcaaagcaggagga 151 ||||||||||||||||||||| Sbjct: 31092 tctgaggtcaaagcaggagga 31072
>gb|AC155338.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH138P04, complete sequence Length = 137697 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 216 agcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtacct 268 |||||||||||||| ||||| || || |||||| ||||||| ||||||||| Sbjct: 23356 agcaggtacgagtcacagaaacgacgtgactggaccacgttcttgcagtacct 23304
>dbj|AB007861.1| Homo sapiens KIAA0401 mRNA, partial cds Length = 6454 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gccgtgcccgtgcccgctccgccag 434 ||||||||||||||| ||||||||| Sbjct: 819 gccgtgcccgtgccctctccgccag 795
>ref|NM_125236.1| Arabidopsis thaliana unknown protein AT5G58500 mRNA, complete cds Length = 549 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 |||||||||||||| || || ||||| ||||| ||| ||| || ||||||||||| Sbjct: 172 tacctcgaccagtttggtaagaccaaagtccatgccacggcttgtcccttcttcgg 227
>ref|XM_480977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 642 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 405 ccggcgccgtgcccgtgcccgctccgccaggc 436 |||| |||||||||||||| ||||||||||| Sbjct: 85 ccggtgccgtgcccgtgccttctccgccaggc 116
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctc 20 |||||||||||||||||||| Sbjct: 1982917 ctcctccccctctttccctc 1982936
>ref|XM_864942.1| PREDICTED: Bos taurus similar to AT rich interactive domain 1B (SWI1-like) isoform 3 (LOC613807), partial mRNA Length = 288 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 gcccgggggcggctgaggcggcgg 207 ||||||||||||| |||||||||| Sbjct: 210 gcccgggggcggcggaggcggcgg 233
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gcggcgcccacgtgctggag 326 |||||||||||||||||||| Sbjct: 1870022 gcggcgcccacgtgctggag 1870041
>gb|AC164589.6| Mus musculus chromosome 8, clone RP24-363C11, complete sequence Length = 197883 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 67902 cctccccctctttccctctc 67921
>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence Length = 226878 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 9991 cctccccctctttccctctc 9972
>gb|AC124992.14| Mus musculus chromosome 10, clone RP23-149L10, complete sequence Length = 194736 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 93513 cctccccctctttccctctc 93494
>ref|XM_804790.1| Trypanosoma cruzi strain CL Brener kinetoplast DNA-associated protein (Tc00.1047053504625.70) partial mRNA Length = 3354 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 373 cgggctgccccttcttcggccacc 396 |||||||||||||| ||||||||| Sbjct: 1205 cgggctgccccttcctcggccacc 1182
>gb|AC131652.2| Mus musculus BAC clone RP23-216A20 from 16, complete sequence Length = 184989 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 130984 cctccccctctttccctctc 131003
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctc 20 |||||||||||||||||||| Sbjct: 74944 ctcctccccctctttccctc 74963
>gb|BT010401.1| Arabidopsis thaliana At5g58500 gene, complete cds Length = 549 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 |||||||||||||| || || ||||| ||||| ||| ||| || ||||||||||| Sbjct: 172 tacctcgaccagtttggtaagaccaaagtccatgccacggcttgtcccttcttcgg 227
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccacgcacccgctgctcgct 60 |||||||||||||||||||| Sbjct: 2672077 ccacgcacccgctgctcgct 2672058
>emb|X60063.1|GDJUNDG G.domesticus junD gene Length = 2988 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 gggcggctgaggcggcggtgcggc 213 |||||||||||| ||||||||||| Sbjct: 726 gggcggctgagggggcggtgcggc 703
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gcggcgcccacgtgctggag 326 |||||||||||||||||||| Sbjct: 31000 gcggcgcccacgtgctggag 31019
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 aggtccacgccccgggctgc 380 |||||||||||||||||||| Sbjct: 16701 aggtccacgccccgggctgc 16720
>gb|AC084706.11| Homo sapiens chromosome , clone RP11-91P17, complete sequence Length = 146810 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 ctctttccctctcgccaccacacccagt 37 ||||||||||||| | |||||||||||| Sbjct: 125871 ctctttccctctccctaccacacccagt 125844
>emb|CR857916.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1030 (from clone DKFZp459N1030) Length = 4891 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gaggcggcggtgcggccgag 217 |||||||||||||||||||| Sbjct: 20 gaggcggcggtgcggccgag 1
>gb|AE011639.1| Xanthomonas axonopodis pv. citri str. 306, section 17 of 469 of the complete genome Length = 12548 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ccacggcaggccggcgtcgt 111 |||||||||||||||||||| Sbjct: 11999 ccacggcaggccggcgtcgt 11980
>tpg|BK000912.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M305, complete sequence Length = 11131 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tcgatctctctctccctccacggc 98 |||||||||||||| ||||||||| Sbjct: 5967 tcgatctctctctctctccacggc 5944
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 ccggcgccgtgcccgtgccc 424 |||||||||||||||||||| Sbjct: 3749173 ccggcgccgtgcccgtgccc 3749192
>gb|AC034214.5| Homo sapiens chromosome 5 clone CTD-2001E22, complete sequence Length = 108661 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctctcgccaccacacccag 36 |||||||||||||||||||| Sbjct: 45959 cctctcgccaccacacccag 45978
>gb|AC024270.6| Homo sapiens chromosome 15, clone RP11-382A20, complete sequence Length = 184113 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctctcgccaccacacccag 36 |||||||||||||||||||| Sbjct: 134957 cctctcgccaccacacccag 134938
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gcaggccggcgtcgtcgatc 116 |||||||||||||||||||| Sbjct: 3669901 gcaggccggcgtcgtcgatc 3669882
>gb|AC026787.5| Homo sapiens chromosome 5 clone CTD-2143L24, complete sequence Length = 146296 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctctcgccaccacacccag 36 |||||||||||||||||||| Sbjct: 8579 cctctcgccaccacacccag 8560
>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctc 20 |||||||||||||||||||| Sbjct: 105085 ctcctccccctctttccctc 105104
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gcggcgcccacgtgctggag 326 |||||||||||||||||||| Sbjct: 32021 gcggcgcccacgtgctggag 32040
>emb|AL113545.1|CNS01AY9 Botrytis cinerea strain T4 cDNA library Length = 720 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctcctccccctctttccctc 20 |||||||||||||||||||| Sbjct: 663 ctcctccccctctttccctc 682
>gb|AC010616.5|AC010616 Homo sapiens chromosome 19 clone CTD-2575K13, complete sequence Length = 171849 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 94791 cctccccctctttccctctc 94772
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgccggcgccgtgcccgtgc 422 |||||||||||||||||||| Sbjct: 7426117 cgccggcgccgtgcccgtgc 7426098
>gb|AE004733.1| Pseudomonas aeruginosa PAO1, section 294 of 529 of the complete genome Length = 11180 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gcaggccggcgtcgtcgatc 116 |||||||||||||||||||| Sbjct: 6807 gcaggccggcgtcgtcgatc 6826
>dbj|AP005495.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0003H03 Length = 157905 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 405 ccggcgccgtgcccgtgcccgctccgccaggc 436 |||| |||||||||||||| ||||||||||| Sbjct: 35239 ccggtgccgtgcccgtgccttctccgccaggc 35208
>dbj|AP005064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0049G15 Length = 155303 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 405 ccggcgccgtgcccgtgcccgctccgccaggc 436 |||| |||||||||||||| ||||||||||| Sbjct: 126591 ccggtgccgtgcccgtgccttctccgccaggc 126560
>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1115_C05 Length = 146585 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tcgatctctctctccctccacggc 98 |||||||||||||| ||||||||| Sbjct: 132042 tcgatctctctctctctccacggc 132019
>dbj|AP003806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1103_E04 Length = 111354 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tcgatctctctctccctccacggc 98 |||||||||||||| ||||||||| Sbjct: 8697 tcgatctctctctctctccacggc 8674
>dbj|AB025632.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ2 Length = 51440 Score = 40.1 bits (20), Expect = 5.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 336 tacctcgaccagttcggcaaaaccaaggtccacgccccgggctgccccttcttcgg 391 |||||||||||||| || || ||||| ||||| ||| ||| || ||||||||||| Sbjct: 31950 tacctcgaccagtttggtaagaccaaagtccatgccacggcttgtcccttcttcgg 31895
>gb|AC003015.1|AC003015 Human BAC clone GS1-113H23 from 5p15.2, complete sequence Length = 132953 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctctcgccaccacacccag 36 |||||||||||||||||||| Sbjct: 96106 cctctcgccaccacacccag 96125
>gb|AC113082.6| Mus musculus chromosome 9, clone RP23-291C4, complete sequence Length = 218087 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 117238 cctccccctctttccctctc 117219
>gb|DQ180312.1| Fragaria x ananassa clone PBCESTFXA7 SSR marker Length = 961 Score = 40.1 bits (20), Expect = 5.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 215 gagcaggtacgagtcgcagaagcgccgggactggcacacgttcgggcagtac 266 |||| ||||||||||||| ||| | |||| ||| |||| |||||||||||| Sbjct: 288 gagccggtacgagtcgcaaaagaggagggattggaacaccttcgggcagtac 339
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cggcaggccggcgtcgtcga 114 |||||||||||||||||||| Sbjct: 926594 cggcaggccggcgtcgtcga 926575 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gcaggccggcgtcgtcgatc 116 |||||||||||||||||||| Sbjct: 179708 gcaggccggcgtcgtcgatc 179689
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgccggcgccgtgcccgtgc 422 |||||||||||||||||||| Sbjct: 7425996 cgccggcgccgtgcccgtgc 7425977
>emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC OJ1220_D01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 98782 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgccggcgccgtgcccgtgc 422 |||||||||||||||||||| Sbjct: 15793 cgccggcgccgtgcccgtgc 15774
>gb|AC154234.1| Mus musculus BAC clone RP24-345H5 from 16, complete sequence Length = 161505 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 7735 cctccccctctttccctctc 7754
>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence Length = 215121 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 197069 cctccccctctttccctctc 197088
>emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on chromosome 2, complete sequence Length = 214642 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctcctccccctctttccctc 20 |||||||||||||||||||| Sbjct: 129040 ctcctccccctctttccctc 129021
>gb|AC099723.16| Mus musculus chromosome 8, clone RP23-369P21, complete sequence Length = 184770 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 52363 cctccccctctttccctctc 52382
>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctcctccccctctttccctc 20 |||||||||||||||||||| Sbjct: 7057 ctcctccccctctttccctc 7038
>emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chromosome 2, complete sequence Length = 237055 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctccccctctttccctctc 22 |||||||||||||||||||| Sbjct: 120405 cctccccctctttccctctc 120424
>dbj|AB028210.1| Streptomyces griseus hya and kan genes for hyaluronidase and aminoglycoside 3-N-acetyltransferase, complete cds Length = 4265 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 187 cgggggcggctgaggcggcggtgc 210 |||||||||| ||||||||||||| Sbjct: 389 cgggggcggcggaggcggcggtgc 366 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,730,496 Number of Sequences: 3902068 Number of extensions: 3730496 Number of successful extensions: 224257 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 221085 Number of HSP's gapped (non-prelim): 3165 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
