ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart61c12 |
|---|---|
| Clone Library Name | barley_pub |
>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell| death-related protein SPL11) Length = 694 Score = 44.3 bits (103), Expect = 2e-04 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = +3 Query: 228 VPREFLCPILGAPMSDPVILPSGRTYERACIQA-CAELFVSPPGLEGDSPASGGVVPIPN 404 +P EF CPI M DPVI+ +G+TYERACI+ A + P + S PN Sbjct: 273 IPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTS---ALTPN 329 Query: 405 DALGAAIRTWSARSGRAP 458 L + I W +G P Sbjct: 330 YVLRSLISQWCETNGMEP 347
>UBE4_CAEEL (Q09349) Probable ubiquitin conjugation factor E4| Length = 980 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/74 (36%), Positives = 39/74 (52%) Frame = +3 Query: 213 DKEENVPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPASGGVV 392 ++ ++VP EF PI+ A M DPV LPSG +RA I+ L +P +P S + Sbjct: 901 EEYDDVPEEFKDPIMDAIMVDPVKLPSGHVMDRAVIE--RHLLSTPNNPFNRAPLSHNEL 958 Query: 393 PIPNDALGAAIRTW 434 P+ L A I+ W Sbjct: 959 S-PDSELKAKIQEW 971
>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box| domain protein 14) Length = 632 Score = 38.9 bits (89), Expect = 0.006 Identities = 24/74 (32%), Positives = 35/74 (47%) Frame = +3 Query: 228 VPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPASGGVVPIPND 407 +P F CPI M DPVI+ +G+TYER+ IQ + ++ G+ PN Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLT--PNY 305 Query: 408 ALGAAIRTWSARSG 449 L + I W +G Sbjct: 306 VLKSLIALWCESNG 319
>RNF37_MOUSE (Q925F4) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (UbcM4-interacting protein 5) (U-box domain-containing protein 5) Length = 539 Score = 35.4 bits (80), Expect = 0.070 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Frame = +3 Query: 219 EENVPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPASGGVV-- 392 E +VP EFL PI M P++LPSG+ +++ ++ C L + G P +G Sbjct: 256 ESDVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKC-NLSEAAWGRVPSDPFTGLAFTP 314 Query: 393 ---PIPNDALGAAI 425 P+P+ +L A I Sbjct: 315 QSQPLPHPSLKARI 328
>RNF39_RAT (Q920M2) RING finger protein 39 (LTP-induced RING finger protein)| Length = 352 Score = 33.9 bits (76), Expect = 0.20 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSP--PGLEGDSPA 377 CP+ G P DPV+L ++ R+C+ C + SP PG E +P+ Sbjct: 20 CPLCGGPFEDPVLLACEHSFCRSCLARC---WGSPAAPGSEEATPS 62
>RNF37_HUMAN (O94941) RING finger protein 37 (Ubiquitin-conjugating enzyme| 7-interacting protein 5) (U-box domain-containing protein 5) Length = 541 Score = 33.9 bits (76), Expect = 0.20 Identities = 14/36 (38%), Positives = 24/36 (66%) Frame = +3 Query: 222 ENVPREFLCPILGAPMSDPVILPSGRTYERACIQAC 329 ++VP EFL PI M P++LPSG+ +++ ++ C Sbjct: 257 QDVPEEFLDPITLEIMPCPMLLPSGKVIDQSTLEKC 292
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 33.1 bits (74), Expect = 0.35 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 Query: 237 EFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSP 350 E LC + P D V L G + R C+ C E+ VSP Sbjct: 18 ELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSP 55
>TRI15_HUMAN (Q9C019) Tripartite motif protein 15 (Zinc finger protein B7) (RING| finger protein 93) (Zinc finger protein 178) Length = 465 Score = 32.3 bits (72), Expect = 0.59 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSPPG-------LEGDSPASGGVVPIPN 404 C + P+ D V +P G T+ R C+ A +++ G + + A + P+P Sbjct: 16 CTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAPVPL 75 Query: 405 DALG 416 LG Sbjct: 76 GPLG 79
>TRI47_MOUSE (Q8C0E3) Tripartite motif protein 47| Length = 641 Score = 32.3 bits (72), Expect = 0.59 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +3 Query: 240 FLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPASGGVVPIP 401 F CPI P+ +PV LP G + AC+ A + P G + SGG P Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGA-----LWPHRSAGGTGGSGGPARCP 55
>TRI15_PANTR (Q7YR33) Tripartite motif protein 15 (Zinc finger protein B7)| Length = 465 Score = 32.0 bits (71), Expect = 0.78 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSPPG-------LEGDSPASGGVVPIPN 404 C + P+ D V +P G T+ R C+ A +++ G + + A + P+P Sbjct: 16 CTLCAGPLEDAVTVPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAPVPL 75 Query: 405 DALG 416 LG Sbjct: 76 GPLG 79
>UBE4A_RAT (Q6P7A2) Ubiquitin conjugation factor E4 A| Length = 1066 Score = 32.0 bits (71), Expect = 0.78 Identities = 14/21 (66%), Positives = 16/21 (76%) Frame = +3 Query: 237 EFLCPILGAPMSDPVILPSGR 299 EFL PI+ MSDPV+LPS R Sbjct: 991 EFLDPIMSTLMSDPVVLPSSR 1011
>UFD2_YEAST (P54860) Ubiquitin conjugation factor E4 (Ubiquitin fusion| degradation protein 2) (UB fusion protein 2) Length = 961 Score = 32.0 bits (71), Expect = 0.78 Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 6/44 (13%) Frame = +3 Query: 213 DKEEN-----VPREFLCPILGAPMSDPVILPSGR-TYERACIQA 326 D+EE+ VP EFL P++ M DPVILP+ + +R+ I+A Sbjct: 871 DEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKA 914
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 26.9 bits (58), Expect(2) = 0.84 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = -3 Query: 330 RMPGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 R P R+RT +P P R R +RSP PP Sbjct: 815 RSPSRSRSRTRSPAAAPPIRRGRSGTRSRSRSYSRSPSPPP 855 Score = 23.5 bits (49), Expect(2) = 0.84 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -1 Query: 449 SRARAPSPDGRSKRVVGYGNHPTRCR 372 SR+ +P P GR + Y P+R R Sbjct: 796 SRSPSPPPRGRGRSYDRYSRSPSRSR 821
>OXAA_RHILO (Q98D88) Inner membrane protein oxaA| Length = 603 Score = 31.6 bits (70), Expect = 1.0 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = -2 Query: 445 ERALQVRMAAPSASLGMGTTPPDAGESPSKPGGETKSSA 329 +R + + AA +A+ G GT P G P+ PGG+T + A Sbjct: 42 QRVEEQKKAAEAANPGAGTPAPAPGTIPNAPGGDTVTVA 80
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 31.2 bits (69), Expect = 1.3 Identities = 35/125 (28%), Positives = 44/125 (35%), Gaps = 4/125 (3%) Frame = -2 Query: 385 PPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGTFSSLSTG 206 PP + SP G +SA A P APS G G FSSLS Sbjct: 33 PPPSAASPGATPGSATASAERASTAAPVASP---------AAPSPGSSGGGGFFSSLSNA 83 Query: 205 DRVAGTDXXXXXXGLEWKGRSFQRHARAAPMLNYQL----GGSGKQSSGALVLLVQ*WTV 38 + Q A AA + Q+ GG+G+ + A VLLV + Sbjct: 84 VK--------------------QTTAAAAATFSEQVGGGSGGAGRGGAAARVLLV----I 119 Query: 37 AHPHT 23 PHT Sbjct: 120 DEPHT 124
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 31.2 bits (69), Expect = 1.3 Identities = 35/125 (28%), Positives = 44/125 (35%), Gaps = 4/125 (3%) Frame = -2 Query: 385 PPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGTFSSLSTG 206 PP A SP G ++A A P APS G G FSSLS Sbjct: 33 PPPAAPSPGATTGPATATAERASSAAPVASP---------AAPSPGSSGGGGFFSSLSNA 83 Query: 205 DRVAGTDXXXXXXGLEWKGRSFQRHARAAPMLNYQL----GGSGKQSSGALVLLVQ*WTV 38 + Q A AA + Q+ GG+G+ + A VLLV + Sbjct: 84 VK--------------------QTTAAAAATFSEQVGGGSGGAGRGGAAARVLLV----I 119 Query: 37 AHPHT 23 PHT Sbjct: 120 DEPHT 124
>Y1738_CHRVO (Q7NX89) UPF0313 protein CV_1738| Length = 758 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -2 Query: 457 GAR-PERALQVRMAAPSASLGMG-------TTPPDAGESPSKPGGETKSS 332 GAR P++ + + AA + G G P AG SP+KPGG+T S Sbjct: 708 GARHPQQGQRAKPAAAVGARGQGGQGGRPGAGKPQAGRSPAKPGGKTSRS 757
>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) (Brain-derived HLMN protein) Length = 5038 Score = 31.2 bits (69), Expect = 1.3 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 285 GSPGRTWARPVSGRGTPVARSPPCPP 208 GSP + RP +G+ TP ++ PP PP Sbjct: 782 GSPTPSGTRPTTGQATPQSQQPPKPP 807
>UBE4B_MOUSE (Q9ES00) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion| degradation protein 2) (Ufd2a) Length = 1173 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 225 NVPREFLCPILGAPMSDPVILPSGRTYERACI 320 + P EF P++ M+DPV LPSG +R+ I Sbjct: 1098 DAPDEFRDPLMDTLMTDPVRLPSGTVMDRSII 1129
>UBE4A_PONPY (Q5R9G3) Ubiquitin conjugation factor E4 A| Length = 1066 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = +3 Query: 237 EFLCPILGAPMSDPVILPSGR-TYERACI 320 EFL PI+ M DPV+LPS R T +R+ I Sbjct: 991 EFLDPIMSTLMCDPVVLPSSRVTVDRSTI 1019
>UBE4A_HUMAN (Q14139) Ubiquitin conjugation factor E4 A| Length = 1066 Score = 31.2 bits (69), Expect = 1.3 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = +3 Query: 237 EFLCPILGAPMSDPVILPSGR-TYERACI 320 EFL PI+ M DPV+LPS R T +R+ I Sbjct: 991 EFLDPIMSTLMCDPVVLPSSRVTVDRSTI 1019
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 31.2 bits (69), Expect = 1.3 Identities = 35/125 (28%), Positives = 44/125 (35%), Gaps = 4/125 (3%) Frame = -2 Query: 385 PPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGTFSSLSTG 206 PP + SP G +SA A P APS G G FSSLS Sbjct: 33 PPPSAASPGATPGSAAASAERASTAAPVASP---------AAPSPGSSGGGGFFSSLSNA 83 Query: 205 DRVAGTDXXXXXXGLEWKGRSFQRHARAAPMLNYQL----GGSGKQSSGALVLLVQ*WTV 38 + Q A AA + Q+ GG+G+ + A VLLV + Sbjct: 84 VK--------------------QTTAAAAATFSEQVGGGSGGAGRGGAAARVLLV----I 119 Query: 37 AHPHT 23 PHT Sbjct: 120 DEPHT 124
>RNF39_MACMU (Q5TM52) RING finger protein 39| Length = 420 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDS-----PASGGVVPIPNDA 410 CP+ G DPV+L ++ RAC+ A + +PP + ++ P G +P P + Sbjct: 88 CPLCGGSFEDPVLLACEHSFCRACL---ARRWGTPPATDTEASPTACPCCG--LPCPRRS 142 Query: 411 LGAAIR 428 L + +R Sbjct: 143 LRSNVR 148
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -3 Query: 342 RKAPRMPGCRRARTSAPTVGSPGRTWARPVSG-RGTPVARSPPCPPG 205 R P PG + VG PG A+ SG +G P A PP PPG Sbjct: 325 RGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPG 371
>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9| Length = 817 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 222 ENVPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPAS 380 E + E CP+ G+ +P+ILP +AC + + V P E +SP S Sbjct: 2 EEMEEELKCPVCGSFYREPIILPCSHNLCQACAR---NILVQTP--ESESPQS 49
>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in| astrocytoma protein) (RING finger protein 100) Length = 638 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 Query: 240 FLCPILGAPMSDPVILPSGRTYERACIQA 326 F CPI P+ +PV LP G + AC+ A Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGA 35
>SECA_TREPA (O83394) Preprotein translocase secA subunit| Length = 916 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = -3 Query: 351 VERRKAPRMPGCRRARTSAPTVGSPGR----TWARPVSGRGTPVARSPPCPPGT 202 +E ++ PR P +A +G PGR A P+ G V R+ PCP G+ Sbjct: 854 MEEQRVPRPPHVAQAAHEFQALGQPGRGHGSLSALPIQA-GAKVGRNTPCPCGS 906
>TRI34_HUMAN (Q9BYJ4) Tripartite motif protein 34 (Interferon-responsive finger| protein 1) (RING finger protein 21) Length = 488 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +3 Query: 225 NVPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPASG 383 NV E CPI +++P+ L G + RACI + V+ G + P G Sbjct: 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCG 60
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3| (EC 2.7.11.1) Length = 1309 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 321 GCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPP 217 GCR + VG+P T +RP+S P A S P Sbjct: 24 GCRSGNRKSLVVGTPSPTLSRPLSPLSVPTAGSSP 58
>UBE4B_HUMAN (O95155) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion| degradation protein 2) (Homozygously deleted in neuroblastoma 1) Length = 1302 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +3 Query: 225 NVPREFLCPILGAPMSDPVILPSGRTYERACI 320 + P EF P++ M+DPV LPSG +R+ I Sbjct: 1227 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSII 1258
>TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacting RING| finger protein) Length = 710 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 222 ENVPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPAS 380 E + E CP+ G+ +P+ILP +AC + + V P E +SP S Sbjct: 2 EEMEEELKCPVCGSFYREPIILPCSHNLCQACAR---NILVQTP--ESESPQS 49
>TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger protein 91)| Length = 710 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +3 Query: 222 ENVPREFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSPPGLEGDSPAS 380 E + E CP+ G+ +P+ILP +AC + + V P E +SP S Sbjct: 2 EEMEEELKCPVCGSFYREPIILPCSHNLCQACAR---NILVQTP--ESESPQS 49
>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived| apoptosis-inducing RBCC protein) (MAIR protein) (Nc8 protein) (Hemopoeitic lineage switch protein 5) Length = 501 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +3 Query: 237 EFLCPILGAPMSDPVILPSGRTYERACIQACAELFVSP 350 E LC + P D V L G + R C+ C E+ +P Sbjct: 18 ELLCAVCYDPFRDAVTLRCGHNFCRRCVSGCWEVQTTP 55
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 30.4 bits (67), Expect = 2.3 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%) Frame = -2 Query: 421 AAPSA-SLGMGTTPPDAGESPSKPG-------GETKSSAHAWMQARSYVRPDGRITGSDM 266 ++PSA ++ TT +SP + G T S + A+ Q S+ P G S + Sbjct: 10 SSPSAFAVSSSTTGTYQTKSPFRFGQPSLFGQNSTPSKSLAFSQVPSFATPSGGSHSSSL 69 Query: 265 GAPSIGQRNSRGTFSSLSTGDRVAGT 188 A + Q +S G FSSL + A T Sbjct: 70 PAFGLTQTSSVGLFSSLESTPSFAAT 95
>LEU21_METKA (Q8TVF2) 3-isopropylmalate dehydratase large subunit 1 (EC| 4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM isomerase 1) (IPMI 1) Length = 418 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/32 (56%), Positives = 19/32 (59%) Frame = +2 Query: 245 LPDTGRAHVRPGDPTVGADVRARLHPGMRGAF 340 LP+ G HVRPGD VGAD H G GAF Sbjct: 105 LPEKG--HVRPGDVIVGADSHTCTH-GALGAF 133
>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor| Length = 476 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 318 CRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCP 211 C+ A PT +PG T P + GTP A S P P Sbjct: 220 CKLANACRPTA-APGTTTTNPPTTTGTPAASSTPSP 254
>UFD2_SCHPO (Q9HE05) Ubiquitin conjugation factor E4 (Ubiquitin fusion| degradation protein 2) (UB fusion protein 2) Length = 1010 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Frame = +3 Query: 225 NVPREFLCPILGAPMSDPVILP-SGRTYERACIQA 326 ++P FL P++ M DPV+LP SG + +R+ I+A Sbjct: 930 DIPDYFLDPLMFTIMKDPVVLPRSGISIDRSTIKA 964
>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)| Length = 579 Score = 30.0 bits (66), Expect = 2.9 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Frame = -2 Query: 457 GARPERALQVRMAAPSASLGMGTTPPDAGESPSKPGGETKSSA--HAWM-QARSYVRPDG 287 G+ P +A + PSASL PP G S S+ G E + SA H + +++S Sbjct: 492 GSSPNQA-----SKPSASLSSHNRPPVQGRSTSQQGEEPQKSASPHPHLNKSQSLTNSLS 546 Query: 286 RITGSDMGAPSIGQ------RNSRGTFSSL 215 S G PS + RN R +F+SL Sbjct: 547 TSDTSHRGTPSEDEAKAETIRNLRKSFASL 576
>FMNL_MOUSE (Q9JL26) Formin-like 1 protein (Formin-related protein)| Length = 1094 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/44 (36%), Positives = 18/44 (40%) Frame = -3 Query: 336 APRMPGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPPG 205 AP +PGC + P G P G PV PP PPG Sbjct: 565 APPLPGCAEPPPAPPLPGDLPPPPPPPPLGTDGPVPPPPPPPPG 608
>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6| Length = 1189 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = -3 Query: 324 PGCRRARTSAPTVGSPGRTWARPVSGR-GTPVARSPPCPPG 205 PG ++ + V PG P +G G PV +SPP PPG Sbjct: 481 PGPNMSQGHSSPVMHPGSPGHHPCAGPPGLPVPQSPPLPPG 521
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/46 (39%), Positives = 20/46 (43%) Frame = -3 Query: 345 RRKAPRMPGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 R AP G R P G P + RP G TP+AR P PP Sbjct: 928 RAPAPTTSGPRSCTPGPP--GQPSPSGWRPPGGGRTPLARRAPQPP 971
>CAC1D_MESAU (Q99244) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide isoform 2) Length = 1610 Score = 30.0 bits (66), Expect = 2.9 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%) Frame = -2 Query: 418 APSASLGMGTTPPDAGESPSKPGGETKSSAHAWMQARSYVR-PDGRITGSDMGAPSIGQR 242 A A+ GT PP +GE P+ +K + +W A R T S P +G Sbjct: 20 ANEANYARGTRPPISGEGPTSQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSL 79 Query: 241 NSR 233 + R Sbjct: 80 SQR 82
>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)| Length = 579 Score = 29.6 bits (65), Expect = 3.8 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%) Frame = -2 Query: 457 GARPERALQVRMAAPSASLGMGTTPPDAGESPSKPGGETKSSA--HAWM-QARSYVRPDG 287 G+ P +A + P+ASL T PP G S S+ G E + +A H + +++S Sbjct: 492 GSSPNQA-----SKPTASLSSHTRPPVQGRSTSQQGEEPQKTASPHPHLNKSQSLTNSLS 546 Query: 286 RITGSDMGAPSIGQ------RNSRGTFSSL 215 S G PS + RN R +F+SL Sbjct: 547 TSDTSHRGTPSEDEAKAETIRNLRKSFASL 576
>GCST_STRCO (O86567) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage| system T protein) Length = 372 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 10/50 (20%) Frame = +2 Query: 203 VPGGQG-GERATGVPLPDTGR---------AHVRPGDPTVGADVRARLHP 322 V GG+ GE +G P P GR AH PG VG D+R P Sbjct: 310 VAGGEVIGEVTSGAPSPTLGRPIAMAYVDPAHAAPGTEGVGVDIRGSHEP 359
>BASP_HUMAN (P80723) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 226 Score = 29.6 bits (65), Expect = 3.8 Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 19/86 (22%) Frame = -2 Query: 454 ARPERALQVRMAAPSASLGMGTTP--------------PDAGESPSKPGGETKSSAHAWM 317 A P +A + AAP + G G P P AGE PSK GE K + Sbjct: 97 AEPPKAPEQEQAAPGPAAG-GEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAA 155 Query: 316 QARSYVRPDGRIT-----GSDMGAPS 254 A + DG GS APS Sbjct: 156 PAAQETKSDGAPASDSKPGSSEAAPS 181
>RNF39_PANTR (Q7YR31) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSPP--GLEGD---SPASGGVVPIPNDA 410 CP+ G DPV+L ++ RAC+ A + +PP G E P G +P P + Sbjct: 88 CPLCGGSFEDPVLLACEHSFCRACL---ARRWGTPPATGTEASPTACPCCG--LPCPRRS 142 Query: 411 LGAAIR 428 L + +R Sbjct: 143 LRSNVR 148
>RNF39_HUMAN (Q9H2S5) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSPP--GLEGD---SPASGGVVPIPNDA 410 CP+ G DPV+L ++ RAC+ A + +PP G E P G +P P + Sbjct: 88 CPLCGGSFEDPVLLACEHSFCRACL---ARRWGTPPATGTEASPTACPCCG--LPCPRRS 142 Query: 411 LGAAIR 428 L + +R Sbjct: 143 LRSNVR 148
>EPLIN_MOUSE (Q9ERG0) Epithelial protein lost in neoplasm (mEPLIN)| Length = 753 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -2 Query: 457 GARPERALQVRMAAPSASLGMGTTPPDAGESPSKPGGETKSSAHAWMQARS 305 G + + L + +LG PP+AGESP PG E A + A S Sbjct: 455 GHKQHKDLWASKSDNEETLGRPAQPPNAGESPHSPGVEDAPIAKVGVLAAS 505
>HMGYA_SOYBN (Q00423) HMG-Y-related protein A (SB16A protein)| Length = 176 Score = 25.4 bits (54), Expect(2) = 4.4 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = -3 Query: 264 ARPVSGRGTPVARSPPCPPGT 202 A P GRG P P PPGT Sbjct: 81 APPKRGRGRPPKPKTPLPPGT 101 Score = 22.7 bits (47), Expect(2) = 4.4 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 6/50 (12%) Frame = -2 Query: 370 ESPSKPGGETKSSAHAWMQARSYVRPDGRITGS------DMGAPSIGQRN 239 E+ ++P G KS+ +++ PD + GS D G S Q N Sbjct: 24 EALNEPNGSNKSAISKYIETTYGELPDATVLGSHLNKMKDSGELSFKQNN 73
>GCST_STRAW (Q82JI2) Aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage| system T protein) Length = 372 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 10/50 (20%) Frame = +2 Query: 203 VPGGQG-GERATGVPLPDTGR---------AHVRPGDPTVGADVRARLHP 322 V GG+ GE +G P P GR AH PG VG D+R P Sbjct: 310 VVGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHAAPGTAGVGVDIRGSHEP 359
>FLGI_WOLSU (Q7M8K6) Flagellar P-ring protein precursor (Basal body P-ring| protein) Length = 349 Score = 29.3 bits (64), Expect = 5.0 Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 10/95 (10%) Frame = -2 Query: 349 GETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRG-----TFSSLSTGDRVAGTD 185 G+ KS + DGRI + GA SIG +N RG + + G + + Sbjct: 110 GDAKSLEGGTLILTPLTGVDGRIYATSQGAISIGGKNERGGGVNHPLAGMLYGGAIIERE 169 Query: 184 -----XXXXXXGLEWKGRSFQRHARAAPMLNYQLG 95 L K +FQ AR LN G Sbjct: 170 IPLDLYSKTGATLSLKSSNFQNAARVQESLNQNFG 204
>FIMA1_SALTI (P37920) Type-1 fimbrial protein, A chain precursor (Type-1A pilin)| Length = 184 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/63 (30%), Positives = 29/63 (46%) Frame = -2 Query: 412 SASLGMGTTPPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSR 233 + + G+G D SP KP G T S+ A ++ + +R R + P GQ N+ Sbjct: 119 TTATGVGIEILDNTSSPLKPDGATFSAKQALVEGTNTLRFTARYKATAAATP--GQANAD 176 Query: 232 GTF 224 TF Sbjct: 177 ATF 179
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 29.3 bits (64), Expect = 5.0 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +3 Query: 213 DKEENVPREFLCPILGAPMSDPVILPSGRTYERACI 320 D+E++ + CP+ + +PVIL G + + CI Sbjct: 151 DEEDDFTEDLTCPLCRSLFKEPVILECGHNFCKHCI 186
>KS6A4_HUMAN (O75676) Ribosomal protein S6 kinase alpha-4 (EC 2.7.11.1) (Nuclear| mitogen-and stress-activated protein kinase 2) (90 kDa ribosomal protein S6 kinase 4) (Ribosomal protein kinase B) (RSKB) Length = 772 Score = 29.3 bits (64), Expect = 5.0 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = -3 Query: 345 RRKAPRMPGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 +R+ ++ +R +P +PGR PV+ +G P + P PP Sbjct: 729 KRRKQKLRSATASRRGSPAPANPGRA---PVASKGAPRRANGPLPP 771
>FUBP1_MOUSE (Q91WJ8) Far upstream element-binding protein 1 (FUSE-binding| protein 1) (FBP) Length = 651 Score = 29.3 bits (64), Expect = 5.0 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Frame = -2 Query: 418 APSASLGMGTTPP----DAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSI 251 AP A G G P A P+K G + S+A A A Y + + GAP+ Sbjct: 499 APYAPQGWGNAYPHWQQQAPPDPAKAGADPNSAAWAAYYAHYYQQQAQPPPAAPAGAPAT 558 Query: 250 GQRNSRG 230 Q N +G Sbjct: 559 TQTNGQG 565
>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9| Length = 728 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/55 (32%), Positives = 24/55 (43%) Frame = -2 Query: 394 GTTPPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRG 230 G TPP G SP+ G + + RP G GS+ +P +G RN G Sbjct: 325 GPTPPGQGPSPTGAYGRNNNPNYNGGYNNRLPRPRGP-PGSNNSSPFLGARNGPG 378
>FOLC_LACCA (P15925) Folylpolyglutamate synthase (EC 6.3.2.17)| (Folylpoly-gamma-glutamate synthetase) (FPGS) (Tetrahydrofolate synthase) (Tetrahydrofolylpolyglutamate synthase) Length = 428 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -2 Query: 340 KSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGTFSSLST 209 K+ H W Q +Y DGRI SD+ P +G R ++ T Sbjct: 230 KAKLHGWGQRFTYEDQDGRI--SDLEVPLVGDYQQRNMAIAIQT 271
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -3 Query: 279 PGRTWAR-PVSGRGTPVARSPPCPPGT 202 PG+T R P RG+P A PP PPG+ Sbjct: 1235 PGQTGNRGPPGSRGSPGAPGPPGPPGS 1261
>PO2F3_MOUSE (P31362) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Epoc-1) Length = 431 Score = 28.9 bits (63), Expect = 6.6 Identities = 21/73 (28%), Positives = 33/73 (45%) Frame = -2 Query: 427 RMAAPSASLGMGTTPPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIG 248 R+ +PS SLG + PP + PG T S + + RP +G +P+ Sbjct: 348 RLVSPSGSLGPLSVPP---VHSTMPGTVTSSCSPG-----NNSRPSSPGSGLHASSPTAS 399 Query: 247 QRNSRGTFSSLST 209 Q NS+ +S S+ Sbjct: 400 QNNSKAAMNSSSS 412
>SYN1_HUMAN (P17600) Synapsin-1 (Synapsin I) (Brain protein 4.1)| Length = 705 Score = 28.9 bits (63), Expect = 6.6 Identities = 33/125 (26%), Positives = 44/125 (35%), Gaps = 4/125 (3%) Frame = -2 Query: 385 PPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGTFSSLSTG 206 PP SP G ++A R G + APS G G FSSLS Sbjct: 33 PPPGAHSPGATPGPGTATAE---------RSSGVAPAASPAAPSPGSSGGGGFFSSLSNA 83 Query: 205 DRVAGTDXXXXXXGLEWKGRSFQRHARAAPMLNYQL----GGSGKQSSGALVLLVQ*WTV 38 + Q A AA + Q+ GG+G+ + + VLLV + Sbjct: 84 VK--------------------QTTAAAAATFSEQVGGGSGGAGRGGAASRVLLV----I 119 Query: 37 AHPHT 23 PHT Sbjct: 120 DEPHT 124
>PO2F3_HUMAN (Q9UKI9) POU domain, class 2, transcription factor 3| (Octamer-binding transcription factor 11) (Oct-11) (Transcription factor Skn-1) (PLA-1 protein) Length = 436 Score = 28.9 bits (63), Expect = 6.6 Identities = 21/73 (28%), Positives = 33/73 (45%) Frame = -2 Query: 427 RMAAPSASLGMGTTPPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIG 248 R+ +PS SLG + PP + PG T S + + RP +G +P+ Sbjct: 355 RLVSPSGSLGPLSVPP---VHSTMPGTVTSSCSPG-----NNSRPSSPGSGLHASSPTAS 406 Query: 247 QRNSRGTFSSLST 209 Q NS+ +S S+ Sbjct: 407 QNNSKAAVNSASS 419
>HNRPK_RAT (P61980) Heterogeneous nuclear ribonucleoprotein K (dC| stretch-binding protein) (CSBP) Length = 463 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 191 PRNPVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRA---RLHPGMR 331 P P GG+GG RA +PLP P P G D+ A R PG R Sbjct: 291 PPPPGRGGRGGSRARNLPLP--------PPPPPRGGDLMAYDRRGRPGDR 332
>HNRPK_RABIT (O19049) Heterogeneous nuclear ribonucleoprotein K (hnRNP K)| Length = 463 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 191 PRNPVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRA---RLHPGMR 331 P P GG+GG RA +PLP P P G D+ A R PG R Sbjct: 291 PPPPGRGGRGGSRARNLPLP--------PPPPPRGGDLMAYDRRGRPGDR 332
>HNRPK_MOUSE (P61979) Heterogeneous nuclear ribonucleoprotein K| Length = 463 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 191 PRNPVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRA---RLHPGMR 331 P P GG+GG RA +PLP P P G D+ A R PG R Sbjct: 291 PPPPGRGGRGGSRARNLPLP--------PPPPPRGGDLMAYDRRGRPGDR 332
>HNRPK_HUMAN (P61978) Heterogeneous nuclear ribonucleoprotein K (hnRNP K)| (Transformation up-regulated nuclear protein) (TUNP) Length = 463 Score = 28.9 bits (63), Expect = 6.6 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 191 PRNPVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRA---RLHPGMR 331 P P GG+GG RA +PLP P P G D+ A R PG R Sbjct: 291 PPPPGRGGRGGSRARNLPLP--------PPPPPRGGDLMAYDRRGRPGDR 332
>FBX42_MOUSE (Q6PDJ6) F-box only protein 42| Length = 717 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/70 (31%), Positives = 28/70 (40%) Frame = -2 Query: 415 PSASLGMGTTPPDAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNS 236 PSAS + P G SPS PG ++ SS +R G G P I +R Sbjct: 571 PSASAALS---PPLGSSPSSPGSQSLSSGETVPNSR-----PGPAQGDGHSLPPIARRLG 622 Query: 235 RGTFSSLSTG 206 SL+ G Sbjct: 623 HHPPQSLNVG 632
>PO5FN_HUMAN (Q9BZW0) POU domain, class 5, transcription factor 1-like protein 3| Length = 286 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = -3 Query: 324 PGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 PG RT G PG P G G+ V PPCPP Sbjct: 20 PGWVDPRTWLSFQGPPGGPGIGPGVGSGSEVWGIPPCPP 58
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -3 Query: 354 QVERRKAPRMPGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCP 211 +++ R +P R AR +A SPG AR S G RSPP P Sbjct: 720 KLKERPSPGPAAGRAARAAAGGTASPGGG-ARRASASGPVPGRSPPAP 766
>YAGQ_ECOLI (P77183) Hypothetical protein yagQ| Length = 318 Score = 28.9 bits (63), Expect = 6.6 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +1 Query: 361 RETRRHRVGWFPYPTTRLERPSGLGARALDAH 456 R + H +GW TT++ P G+ +A DAH Sbjct: 260 RLQKLHELGWSREETTQIRAPVGIFPKARDAH 291
>CI047_HUMAN (Q6ZRZ4) Protein C9orf47 precursor| Length = 202 Score = 28.9 bits (63), Expect = 6.6 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = +2 Query: 185 VRPRNPVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRARLHP-GMRGAFR 343 +RPR PVPG + T L D RPG+ A+ P G+R R Sbjct: 82 LRPRKPVPGTGNRDSGTRRRLQDATEQDPRPGNDVASAETAGPPSPSGIRAQDR 135
>PO5F1_PANTR (Q7YR49) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) Length = 360 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = -3 Query: 324 PGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 PG RT G PG P G G+ V PPCPP Sbjct: 27 PGWVDPRTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPP 65
>PO5F1_HUMAN (Q01860) POU domain, class 5, transcription factor 1| (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) Length = 360 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = -3 Query: 324 PGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 PG RT G PG P G G+ V PPCPP Sbjct: 27 PGWVDPRTWLSFQGPPGGPGIGPGVGPGSEVWGIPPCPP 65
>ATS7_HUMAN (Q9UKP4) ADAMTS-7 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 7) (ADAM-TS 7) (ADAM-TS7) Length = 997 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +2 Query: 200 PVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRARLHPG 325 P G GG GVP P T RPG + G+ PG Sbjct: 794 PASRGPGGGSRGGVPRPSTLHGRSRPGGVSPGSVTEPGSEPG 835
>Y410_VIBPA (Q87SL3) UPF0078 membrane protein VP0410| Length = 203 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/54 (33%), Positives = 25/54 (46%) Frame = +3 Query: 273 DPVILPSGRTYERACIQACAELFVSPPGLEGDSPASGGVVPIPNDALGAAIRTW 434 DP+IL G AC+ +F G +G + A G + PI D G + TW Sbjct: 79 DPIIL--GVIAIAACLGHMYPIFFHFKGGKGVATALGAIAPIGLDLTGLVMLTW 130
>FMNL_HUMAN (O95466) Formin-like 1 protein (Formin-like protein) (Leukocyte| formin) (CLL-associated antigen KW-13) Length = 1100 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 5/49 (10%) Frame = -3 Query: 333 PRMPGCRRARTSAPTV-----GSPGRTWARPVSGRGTPVARSPPCPPGT 202 P +P + A SAP GSP A P+ G P PP PPGT Sbjct: 549 PGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGT 597
>TRI15_MACMU (Q5TM55) Tripartite motif protein 15| Length = 465 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 7/64 (10%) Frame = +3 Query: 246 CPILGAPMSDPVILPSGRTYERACIQACAELFVSPPG-------LEGDSPASGGVVPIPN 404 C + P+ D V P G T+ R C+ +++ G + + A + P+P Sbjct: 16 CTLCVGPLEDAVTAPCGHTFCRLCLPTLSQMGAQSSGKILLCPLCQEEEQAETPMAPVPL 75 Query: 405 DALG 416 LG Sbjct: 76 GPLG 79
>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Frame = +2 Query: 206 PGGQGGERATGVPLPDTGR-----AHVRPGDPTVG 295 PG GG A G P+P G RPG P+VG Sbjct: 724 PGNFGGSNAFGPPIPPPGLGGGAFGDARPGMPSVG 758
>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Frame = +2 Query: 206 PGGQGGERATGVPLPDTGR-----AHVRPGDPTVG 295 PG GG A G P+P G RPG P+VG Sbjct: 724 PGNFGGSNAFGPPIPPPGLGGGAFGDARPGMPSVG 758
>DSRAD_HUMAN (P55265) Double-stranded RNA-specific adenosine deaminase (EC| 3.5.4.-) (DRADA) (136 kDa double-stranded RNA-binding protein) (P136) (K88DSRBP) (Interferon-inducible protein 4) (IFI-4 protein) Length = 1226 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = -2 Query: 334 SAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGT 227 SA AW Q VRPD GS P + +S T Sbjct: 249 SAQAWNQHSGVVRPDSHSQGSPNSDPGLEPEDSNST 284 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -2 Query: 370 ESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSIGQRNSRGT 227 E+ + P + S AW Q VRPDG G+ PS+ + T Sbjct: 188 EAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQGAPNSDPSLEPEDRNST 235
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 Query: 240 FLCPILGAPMSDPVILPSGRTYERACIQAC 329 F CP+ PV +P G + AC+Q C Sbjct: 28 FTCPVCLEVFEKPVQVPCGHVFCSACLQEC 57
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = +3 Query: 240 FLCPILGAPMSDPVILPSGRTYERACIQAC 329 F CP+ PV +P G + AC+Q C Sbjct: 28 FTCPVCLEVFEKPVQVPCGHVFCSACLQEC 57
>FTSK_MYCTU (O33290) DNA translocase ftsK| Length = 831 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = +2 Query: 185 VRPRNPVPGGQGGERATGVPLPDTGRAHVRPGDPTVGADVRARLHP 322 VR P+PG + A G+ +P+T R VR D + R HP Sbjct: 424 VRMLAPIPG----KSAVGIEVPNTDREMVRLADVLTARETRRDHHP 465
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain| associated with RING and Traf domains protein 1) (Malignant 62) (RING finger protein 83) Length = 470 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +3 Query: 222 ENVPREFLCPILGAPMSDPV-ILPSGRTYERACIQ 323 E R LCP+ G PM +PV + G + C+Q Sbjct: 10 EKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQ 44
>PTPA1_GIBZE (Q4I0M9) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 445 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 6/39 (15%) Frame = -3 Query: 300 SAPTVGSPGRT--WAR----PVSGRGTPVARSPPCPPGT 202 +APT PG + WA+ P SG G P +R PP P + Sbjct: 376 AAPTPSGPGTSAPWAQATRMPPSGPGIPYSRMPPPGPNS 414
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = -3 Query: 345 RRKAPRMPGCRRARTSAPTVGSPGRTWARPVSGRGTPVARSPPCPP 208 R AP G R + P SP W P GR TP+AR P PP Sbjct: 928 RVPAPTASGPRSSTPGPPGQPSPSG-WGPPGGGR-TPLARRAPQPP 971
>UBP10_YEAST (P53874) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) (Disrupter of telomere silencing protein 4) Length = 792 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 14/62 (22%) Frame = -2 Query: 406 SLGMGTTPPDAGESPSKPGGETKSSAHAWMQARSYVRP--------------DGRITGSD 269 S + T PP + K G E + + +AR YV P DG G D Sbjct: 118 STELSTEPPSSSSEDDKVGKEEEEEGEIFHEARDYVEPRKASLKERDNADKGDGEDIGED 177 Query: 268 MG 263 +G Sbjct: 178 IG 179
>FUBP1_HUMAN (Q96AE4) Far upstream element-binding protein 1 (FUSE-binding| protein 1) (FBP) (DNA helicase V) (HDH V) Length = 643 Score = 28.5 bits (62), Expect = 8.6 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%) Frame = -2 Query: 418 APSASLGMGTTPP----DAGESPSKPGGETKSSAHAWMQARSYVRPDGRITGSDMGAPSI 251 AP A G G P A P+K G + S+A A A Y + + GAP+ Sbjct: 502 APYAPQGWGNAYPHWQQQAPPDPAKAGTDPNSAAWAAYYAHYYQQQAQPPPAAPAGAPTT 561 Query: 250 GQRNSRG 230 Q N +G Sbjct: 562 TQTNGQG 568 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,870,878 Number of Sequences: 219361 Number of extensions: 1497453 Number of successful extensions: 5961 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 5297 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5941 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
