>ref|XM_475188.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 855

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                               
Query: 330 gaacctggagatgtgcaccgaggcgctcgggtgcgagaccggtggcgtcgac 381
           |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 174 gaacctggagatgtgcaccgaggcgctcgggtgcgagaccggcggcgtcgac 225



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 180 ttcgctgctcgactcgccgccgcag 204
           |||| ||||||||||||||||||||
Sbjct: 6   ttcgttgctcgactcgccgccgcag 30

>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01,
             complete sequence
          Length = 88352

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                                 
Query: 330   gaacctggagatgtgcaccgaggcgctcgggtgcgagaccggtggcgtcgac 381
             |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 80650 gaacctggagatgtgcaccgaggcgctcgggtgcgagaccggcggcgtcgac 80701



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 180   ttcgctgctcgactcgccgccgcag 204
             |||| ||||||||||||||||||||
Sbjct: 80482 ttcgttgctcgactcgccgccgcag 80506

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                                    
Query: 330      gaacctggagatgtgcaccgaggcgctcgggtgcgagaccggtggcgtcgac 381
                |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18775247 gaacctggagatgtgcaccgaggcgctcgggtgcgagaccggcggcgtcgac 18775298



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 180      ttcgctgctcgactcgccgccgcag 204
                |||| ||||||||||||||||||||
Sbjct: 18775079 ttcgttgctcgactcgccgccgcag 18775103

>emb|CR956624.6| Pig DNA sequence from clone CH242-281E17 on chromosome 17, complete
             sequence
          Length = 155839

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 252   tgccaagcctaggcttgtgtc 272
             |||||||||||||||||||||
Sbjct: 68758 tgccaagcctaggcttgtgtc 68738

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     acgaccgtcacctcgaccgt 157
               ||||||||||||||||||||
Sbjct: 1924797 acgaccgtcacctcgaccgt 1924816

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    gcggctgacgacgccgacga 404
              ||||||||||||||||||||
Sbjct: 737413 gcggctgacgacgccgacga 737432

>gb|BC007092.1| Homo sapiens homeobox B13, mRNA (cDNA clone MGC:14711 IMAGE:4250486),
            complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  ccaggaacctgccaagcctaggct 266
            |||||||||||||||||| |||||
Sbjct: 994  ccaggaacctgccaagcccaggct 1017

>gb|AC068531.9| Homo sapiens chromosome 17, clone RP11-463M16, complete sequence
          Length = 182555

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 243   ccaggaacctgccaagcctaggct 266
             |||||||||||||||||| |||||
Sbjct: 21945 ccaggaacctgccaagcccaggct 21922

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 381     cccagcggctgacgacgccg 400
               ||||||||||||||||||||
Sbjct: 2004071 cccagcggctgacgacgccg 2004090

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 385     gcggctgacgacgccgacga 404
               ||||||||||||||||||||
Sbjct: 2057709 gcggctgacgacgccgacga 2057728

>gb|AY937237.1| Homo sapiens PSGD protein (HOXB13) mRNA, complete cds, alternatively
            spliced
          Length = 3056

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  ccaggaacctgccaagcctaggct 266
            |||||||||||||||||| |||||
Sbjct: 1073 ccaggaacctgccaagcccaggct 1096

>gb|AC091179.5| Homo sapiens chromosome 17, clone CTD-2377D24, complete sequence
          Length = 85424

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   ccaggaacctgccaagcctaggct 266
             |||||||||||||||||| |||||
Sbjct: 27968 ccaggaacctgccaagcccaggct 27991

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 387     ggctgacgacgccgacgagc 406
               ||||||||||||||||||||
Sbjct: 1464545 ggctgacgacgccgacgagc 1464564

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    gcggctgacgacgccgacga 404
              ||||||||||||||||||||
Sbjct: 745724 gcggctgacgacgccgacga 745705

>gb|L19650.1|INSISRL1A Rhizobium leguminosarum bv. viciae insertion sequence ISR11, complete
            sequence
          Length = 2495

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 394  gacgccgacgagcgcatcgagcgg 417
            |||||||| |||||||||||||||
Sbjct: 1484 gacgccgatgagcgcatcgagcgg 1461

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 352     gcgctcgggtgcgagaccgg 371
               ||||||||||||||||||||
Sbjct: 2550445 gcgctcgggtgcgagaccgg 2550426

>gb|BC070233.1| Homo sapiens homeobox B13, mRNA (cDNA clone MGC:88215 IMAGE:6668163),
            complete cds
          Length = 1438

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  ccaggaacctgccaagcctaggct 266
            |||||||||||||||||| |||||
Sbjct: 999  ccaggaacctgccaagcccaggct 1022

>ref|NM_006361.5| Homo sapiens homeobox B13 (HOXB13), mRNA
          Length = 3047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  ccaggaacctgccaagcctaggct 266
            |||||||||||||||||| |||||
Sbjct: 1064 ccaggaacctgccaagcccaggct 1087

>gb|U57052.1|HSU57052 Human Hoxb-13 mRNA, complete cds
          Length = 1026

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 243 ccaggaacctgccaagcctaggct 266
           |||||||||||||||||| |||||
Sbjct: 962 ccaggaacctgccaagcccaggct 985

>gb|U09991.1|SVU09991 Streptomyces venezuelae ISP5230 chloramphenicol resistance protein 
           (cmlv) and chloramphenicol phosphotransferase genes,
           complete cds
          Length = 2355

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 385 gcggctgacgacgccgacgagcgc 408
           |||| |||||||||||||||||||
Sbjct: 630 gcgggtgacgacgccgacgagcgc 607


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,096,577
Number of Sequences: 3902068
Number of extensions: 2096577
Number of successful extensions: 38608
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38001
Number of HSP's gapped (non-prelim): 607
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)