ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart61b04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1440 Score = 167 bits (84), Expect = 4e-38 Identities = 195/232 (84%) Strand = Plus / Plus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccggtgcattccctgccctc 184 |||||||| ||||||||| |||| |||||||||||||||||||| | || | |||||| Sbjct: 201 ttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcggccctc 260 Query: 185 ttcccggcggtgcagccgccctacggccggaccttcttcggcatgccggccggccggcaa 244 || | | ||||| |||||| | ||||||||||| |||||||||||| ||||||||| Sbjct: 261 atcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggccggttc 320 Query: 245 agcgacggccgcctcaccatcgacttcatggctcaaagcctgggcctccgttacctgagt 304 ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| Sbjct: 321 agcgacggccgcctcaccatcgacttcatggctcagagcctggggattcgttacctcagt 380 Query: 305 gcgtatctggattctctggggagcaacttcacgcagggagccaatttcgcga 356 || || || ||||| | ||||| ||||||| || || ||||||||||||| Sbjct: 381 gcatacctcgattcagttgggagtaacttcagtcaaggtgccaatttcgcga 432
>dbj|AK071404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E11, full insert sequence Length = 1439 Score = 167 bits (84), Expect = 4e-38 Identities = 195/232 (84%) Strand = Plus / Plus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccggtgcattccctgccctc 184 |||||||| ||||||||| |||| |||||||||||||||||||| | || | |||||| Sbjct: 200 ttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcggccctc 259 Query: 185 ttcccggcggtgcagccgccctacggccggaccttcttcggcatgccggccggccggcaa 244 || | | ||||| |||||| | ||||||||||| |||||||||||| ||||||||| Sbjct: 260 atcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggccggttc 319 Query: 245 agcgacggccgcctcaccatcgacttcatggctcaaagcctgggcctccgttacctgagt 304 ||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| Sbjct: 320 agcgacggccgcctcaccatcgacttcatggctcagagcctggggattcgttacctcagt 379 Query: 305 gcgtatctggattctctggggagcaacttcacgcagggagccaatttcgcga 356 || || || ||||| | ||||| ||||||| || || ||||||||||||| Sbjct: 380 gcatacctcgattcagttgggagtaacttcagtcaaggtgccaatttcgcga 431
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 133 bits (67), Expect = 6e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccggtgcattccctgccctc 184 |||||||| ||||||||| |||| |||||||||||||||||||| | || | |||||| Sbjct: 23762681 ttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcggccctc 23762622 Query: 185 ttcccggcggtgcagccgccctacggccggaccttcttcggcatgccggccggccggcaa 244 || | | ||||| |||||| | ||||||||||| |||||||||||| ||||||||| Sbjct: 23762621 atcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggccggttc 23762562 Query: 245 agcgacggccgcctcaccatcgacttcatgg 275 ||||||||||||||||||||||||||||||| Sbjct: 23762561 agcgacggccgcctcaccatcgacttcatgg 23762531 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 199 gccgccctacggccggaccttcttcggcatgccggccggccggcaaagcgacggccgcct 258 ||||||| ||||| ||||||||||||||||||| | |||||| | ||||||||||||| Sbjct: 23769972 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 23769913 Query: 259 caccatcgacttcat 273 | |||||||||||| Sbjct: 23769912 cgtcatcgacttcat 23769898 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 123 gcttcccggccatcttcaacctcggtgactccaactcggacac 165 ||||||||||| | |||||| |||| ||||||||||| ||||| Sbjct: 23770048 gcttcccggccgtgttcaacttcggcgactccaactccgacac 23770006 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 23768416 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 23768358
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 133 bits (67), Expect = 6e-28 Identities = 130/151 (86%) Strand = Plus / Minus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccggtgcattccctgccctc 184 |||||||| ||||||||| |||| |||||||||||||||||||| | || | |||||| Sbjct: 17611 ttcccggcgatcttcaacttcggcgactccaactcggacaccggcgggctctcggccctc 17552 Query: 185 ttcccggcggtgcagccgccctacggccggaccttcttcggcatgccggccggccggcaa 244 || | | ||||| |||||| | ||||||||||| |||||||||||| ||||||||| Sbjct: 17551 atcgccgtggtgccgccgccgttcggccggacctacttcggcatgcccgccggccggttc 17492 Query: 245 agcgacggccgcctcaccatcgacttcatgg 275 ||||||||||||||||||||||||||||||| Sbjct: 17491 agcgacggccgcctcaccatcgacttcatgg 17461 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 199 gccgccctacggccggaccttcttcggcatgccggccggccggcaaagcgacggccgcct 258 ||||||| ||||| ||||||||||||||||||| | |||||| | ||||||||||||| Sbjct: 24902 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 24843 Query: 259 caccatcgacttcat 273 | |||||||||||| Sbjct: 24842 cgtcatcgacttcat 24828 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Minus Query: 123 gcttcccggccatcttcaacctcggtgactccaactcggacac 165 ||||||||||| | |||||| |||| ||||||||||| ||||| Sbjct: 24978 gcttcccggccgtgttcaacttcggcgactccaactccgacac 24936 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 23346 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 23288
>ref|XM_478921.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1757 Score = 93.7 bits (47), Expect = 5e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 199 gccgccctacggccggaccttcttcggcatgccggccggccggcaaagcgacggccgcct 258 ||||||| ||||| ||||||||||||||||||| | |||||| | ||||||||||||| Sbjct: 581 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 640 Query: 259 caccatcgacttcatggctcaaagcctgggcctccgttacctgagtgcgta 309 | |||||||||||| ||| |||||||||| || | |||||| |||||||| Sbjct: 641 cgtcatcgacttcatcgctgaaagcctgggactgccttacctcagtgcgta 691 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 791 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 849 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 123 gcttcccggccatcttcaacctcggtgactccaactcggacac 165 ||||||||||| | |||||| |||| ||||||||||| ||||| Sbjct: 505 gcttcccggccgtgttcaacttcggcgactccaactccgacac 547
>dbj|AK073754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067M09, full insert sequence Length = 1757 Score = 93.7 bits (47), Expect = 5e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 199 gccgccctacggccggaccttcttcggcatgccggccggccggcaaagcgacggccgcct 258 ||||||| ||||| ||||||||||||||||||| | |||||| | ||||||||||||| Sbjct: 581 gccgcccaacggcaggaccttcttcggcatgcccgtcggccgctactgcgacggccgcct 640 Query: 259 caccatcgacttcatggctcaaagcctgggcctccgttacctgagtgcgta 309 | |||||||||||| ||| |||||||||| || | |||||| |||||||| Sbjct: 641 cgtcatcgacttcatcgctgaaagcctgggactgccttacctcagtgcgta 691 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 791 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 849 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 123 gcttcccggccatcttcaacctcggtgactccaactcggacac 165 ||||||||||| | |||||| |||| ||||||||||| ||||| Sbjct: 505 gcttcccggccgtgttcaacttcggcgactccaactccgacac 547
>dbj|AB093208.1| Zea mays ache mRNA for hypothetical protein, complete cds Length = 1471 Score = 83.8 bits (42), Expect = 5e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 199 gccgccctacggccggaccttcttcggcatgccggccggccggcaaagcgacggccgcct 258 ||||||| ||||| ||||||||||||||||||| |||||||| | |||| || ||||| Sbjct: 271 gccgcccaacggcaggaccttcttcggcatgcccgccggccgctactgcgatggtcgcct 330 Query: 259 caccatcgacttcatggctcaaagcctgggcctccgttacctgagtgcgtatctggattc 318 | |||||||||||| ||| |||||||||| || | |||| |||||||| ||| | || Sbjct: 331 cgtcatcgacttcatcgctgaaagcctgggactgactcacctcagtgcgtacctgaactc 390 Query: 319 tctggggagcaacttcacgcagggagccaa 348 | || ||||||||||| ||||||||||| Sbjct: 391 gattggaagcaacttcacacagggagccaa 420 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 124 cttcccggccatcttcaacctcggtgactccaactcggacac 165 |||||||||| | |||||| |||| ||||||||||||||||| Sbjct: 196 cttcccggccgtgttcaacttcggcgactccaactcggacac 237 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctgg 439 ||||||||||||| ||||||||||| ||||| Sbjct: 481 cagccccatttccttggacgtgcagttctgg 511
>gb|AY107095.1| Zea mays PCO131316 mRNA sequence Length = 1042 Score = 83.8 bits (42), Expect = 5e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 199 gccgccctacggccggaccttcttcggcatgccggccggccggcaaagcgacggccgcct 258 ||||||| ||||| ||||||||||||||||||| |||||||| | |||| || ||||| Sbjct: 284 gccgcccaacggcaggaccttcttcggcatgcccgccggccgctactgcgatggtcgcct 343 Query: 259 caccatcgacttcatggctcaaagcctgggcctccgttacctgagtgcgtatctggattc 318 | |||||||||||| ||| |||||||||| || | |||| |||||||| ||| | || Sbjct: 344 cgtcatcgacttcatcgctgaaagcctgggactgactcacctcagtgcgtacctgaactc 403 Query: 319 tctggggagcaacttcacgcagggagccaa 348 | || ||||||||||| ||||||||||| Sbjct: 404 gattggaagcaacttcacacagggagccaa 433 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 124 cttcccggccatcttcaacctcggtgactccaactcggacac 165 |||||||||| | |||||| |||| ||||||||||||||||| Sbjct: 209 cttcccggccgtgttcaacttcggcgactccaactcggacac 250 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctgg 439 ||||||||||||| ||||||||||| ||||| Sbjct: 494 cagccccatttccttggacgtgcagttctgg 524
>ref|NM_185614.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||||||| |||| ||||||||||| |||||||| Sbjct: 135 ttcccggccgtcttcaacttcggcgactccaactccgacaccgg 178
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||||||| |||| ||||||||||| |||||||| Sbjct: 3057875 ttcccggccgtcttcaacttcggcgactccaactccgacaccgg 3057832
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||||||| |||| ||||||||||| |||||||| Sbjct: 12060 ttcccggccgtcttcaacttcggcgactccaactccgacaccgg 12017
>dbj|AK073443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044K03, full insert sequence Length = 1417 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 125 ttcccggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||||||| |||| ||||||||||| |||||||| Sbjct: 135 ttcccggccgtcttcaacttcggcgactccaactccgacaccgg 178
>ref|NM_183855.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 134 atcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||||||||||||||||||| Sbjct: 301 atcttcaacttcggcgactccaactcggacaccgg 335
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 134 atcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||||||||||||||||||| Sbjct: 12717521 atcttcaacttcggcgactccaactcggacaccgg 12717555 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 |||||||||||||||||||||||||| Sbjct: 12725309 gcgacggccgcctcaccatcgacttc 12725334 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 |||||||||||||| |||||||||||| Sbjct: 26196768 cgacggccgcctcatcatcgacttcat 26196794 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 26242957 acggccgcctcatcatcgacttcat 26242981 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 26224252 acggccgcctcatcatcgacttcat 26224276 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 26216198 acggccgcctcatcatcgacttcat 26216222 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacac 165 |||||| |||| ||||||||||||||||| Sbjct: 12725197 ttcaacttcggggactccaactcggacac 12725225 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 6287657 acggccgcctcatcatcgacttcat 6287681 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 29305140 actccaactcggacaccggt 29305121 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccctacggccggaccttcttcggc 226 |||||||||| ||||||||||||| Sbjct: 24309145 ccctacggccagaccttcttcggc 24309168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gcatgccggccggccggcaa 244 |||||||||||||||||||| Sbjct: 8907679 gcatgccggccggccggcaa 8907698
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 134 atcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||||||||||||||||||| Sbjct: 84550 atcttcaacttcggcgactccaactcggacaccgg 84584 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 |||||||||||||||||||||||||| Sbjct: 92338 gcgacggccgcctcaccatcgacttc 92363 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacac 165 |||||| |||| ||||||||||||||||| Sbjct: 92226 ttcaacttcggggactccaactcggacac 92254
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full insert sequence Length = 1895 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 134 atcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||||||||||||||||||| Sbjct: 546 atcttcaacttcggcgactccaactcggacaccgg 580
>dbj|AK105168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-F02, full insert sequence Length = 801 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 134 atcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||||||||||||||||||| Sbjct: 543 atcttcaacttcggcgactccaactcggacaccgg 577
>ref|NM_183857.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 372 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 |||||||||||||||||||||||||| Sbjct: 281 gcgacggccgcctcaccatcgacttc 306 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacac 165 |||||| |||| ||||||||||||||||| Sbjct: 169 ttcaacttcggggactccaactcggacac 197
>dbj|AP003143.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489E06 Length = 140229 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 |||||||||||||||||||||||||| Sbjct: 5708 gcgacggccgcctcaccatcgacttc 5733 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacac 165 |||||| |||| ||||||||||||||||| Sbjct: 5596 ttcaacttcggggactccaactcggacac 5624
>dbj|AK100480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095I15, full insert sequence Length = 2974 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 |||||||||||||||||||||||||| Sbjct: 220 gcgacggccgcctcaccatcgacttc 245 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacac 165 |||||| |||| ||||||||||||||||| Sbjct: 108 ttcaacttcggggactccaactcggacac 136
>ref|XM_466655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1212 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Plus Query: 129 cggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||| ||||||| |||||||||||| Sbjct: 128 cggccatctacaacttcggggactccatctcggacaccgg 167
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 129 cggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||| ||||||| |||||||||||| Sbjct: 23913735 cggccatctacaacttcggggactccatctcggacaccgg 23913696 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 133 catcttcaacctcggtgactccaactcggacaccgg 168 ||||| |||| |||| ||||||| |||||||||||| Sbjct: 23671525 catctacaacttcggggactccatctcggacaccgg 23671560
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 129 cggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||| ||||||| |||||||||||| Sbjct: 135401 cggccatctacaacttcggggactccatctcggacaccgg 135362
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 129 cggccatcttcaacctcggtgactccaactcggacaccgg 168 ||||||||| |||| |||| ||||||| |||||||||||| Sbjct: 47699 cggccatctacaacttcggggactccatctcggacaccgg 47660
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 ||||||||||||| ||||||||||||| Sbjct: 231 cgacggccgcctccccatcgacttcat 257
>ref|XM_478922.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1115 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 140 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 198
>gb|AY566266.1| Avena sativa lipase 1 mRNA, complete cds Length = 1410 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 |||||||||||||| |||||||||||| Sbjct: 237 cgacggccgcctcatcatcgacttcat 263
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08, complete sequence Length = 94286 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 ||||||||||||| ||||||||||||| Sbjct: 58359 cgacggccgcctccccatcgacttcat 58385
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 ||||||||||||| ||||||||||||| Sbjct: 6754098 cgacggccgcctccccatcgacttcat 6754124 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 ||||||||||||||| |||||||||| Sbjct: 19359158 gcgacggccgcctcatcatcgacttc 19359183 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 3446655 ttcaacttcggcgactccaactccgacaccgg 3446624 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 3435970 ttcaacttcggcgactccaactccgacaccgg 3435939
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 |||||||||||||| |||||||||||| Sbjct: 102185 cgacggccgcctcatcatcgacttcat 102211
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 |||||||||||||| |||||||||||| Sbjct: 8999 cgacggccgcctcatcatcgacttcat 9025 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 55638 acggccgcctcatcatcgacttcat 55662 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 36933 acggccgcctcatcatcgacttcat 36957 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 28879 acggccgcctcatcatcgacttcat 28903
>dbj|AK099293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135D02, full insert sequence Length = 1126 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 160 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 218 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Plus Query: 252 gccgcctcaccatcgacttcatggctcaaagcctgggcctccgttacctgagtgcgta 309 |||||||| |||||||||||| ||| ||||||||| || | |||||| |||||||| Sbjct: 3 gccgcctcgtcatcgacttcatcgctggaagcctgggactgccttacctcagtgcgta 60
>dbj|AK060131.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B10, full insert sequence Length = 1117 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 409 cagccccatttccctggacgtgcaggtctggcagctccagcagttcatcaacaggagcc 467 ||||||||||||| ||||||||||| |||| || | | |||||||||||||| |||| Sbjct: 142 cagccccatttccttggacgtgcagtcctgggagtttgaacagttcatcaacagaagcc 200
>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 cgacggccgcctcaccatcgacttcat 273 |||||||||||||| |||||||||||| Sbjct: 37898 cgacggccgcctcatcatcgacttcat 37924 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 57778 acggccgcctcatcatcgacttcat 57802
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 gcgacggccgcctcaccatcgacttc 271 ||||||||||||||| |||||||||| Sbjct: 62507 gcgacggccgcctcatcatcgacttc 62532
>ref|NM_188439.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 230 acggccgcctcatcatcgacttcat 254
>ref|NM_192358.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1203 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 245 acggccgcctcatcatcgacttcat 269
>ref|NM_192360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1269 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 260 acggccgcctcatcatcgacttcat 284
>ref|NM_192363.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 561 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 260 acggccgcctcatcatcgacttcat 284
>gb|AC147563.4| Mus musculus BAC clone RP23-231H21 from chromosome 10, complete sequence Length = 236428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 ctccagcagttcatcaacagg 463 ||||||||||||||||||||| Sbjct: 68266 ctccagcagttcatcaacagg 68286
>ref|XM_717404.1| Candida albicans SC5314 hypothetical protein (CaO19_1447), mRNA Length = 1617 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tgttgctggcggtggtggtgc 80 ||||||||||||||||||||| Sbjct: 255 tgttgctggcggtggtggtgc 235
>ref|XM_717265.1| Candida albicans SC5314 hypothetical protein (CaO19_9022), mRNA Length = 1617 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 tgttgctggcggtggtggtgc 80 ||||||||||||||||||||| Sbjct: 255 tgttgctggcggtggtggtgc 235
>gb|AC122810.4| Mus musculus BAC clone RP23-276H4 from chromosome 10, complete sequence Length = 177681 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 ctccagcagttcatcaacagg 463 ||||||||||||||||||||| Sbjct: 54097 ctccagcagttcatcaacagg 54117
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tccccgtgcggcttcccggcc 133 ||||||||||||||||||||| Sbjct: 4387953 tccccgtgcggcttcccggcc 4387973
>emb|Z24756.1|SPRHP51GA S.pombe rhp51 and rpa1 genes, complete CDS's Length = 2785 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 tcctgttgctggcggtggtggtgct 81 ||||||||||||||||| ||||||| Sbjct: 397 tcctgttgctggcggtgctggtgct 373
>emb|Z22691.1|SPRHP51A S.pombe of rhp51, and rpa1+ genes Length = 2501 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 tcctgttgctggcggtggtggtgct 81 ||||||||||||||||| ||||||| Sbjct: 111 tcctgttgctggcggtgctggtgct 87
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 gccggccggcaaagcgacggc 253 ||||||||||||||||||||| Sbjct: 1304633 gccggccggcaaagcgacggc 1304613
>ref|NM_136440.4| Drosophila melanogaster p47 CG11139-RA (p47), mRNA Length = 1407 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cggtggtggtgctaaagctct 89 ||||||||||||||||||||| Sbjct: 699 cggtggtggtgctaaagctct 719
>gb|AY058260.1| Drosophila melanogaster GH01724 full length cDNA Length = 1422 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cggtggtggtgctaaagctct 89 ||||||||||||||||||||| Sbjct: 699 cggtggtggtgctaaagctct 719
>gb|DQ021381.1| Digitalis lanata lanatoside 15'-O-acetylesterase gene, complete cds Length = 1609 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 130 ggccatcttcaacctcggtgactccaactcggacaccggtg 170 |||||| |||||| |||| ||||||||||| || ||||||| Sbjct: 102 ggccattttcaacttcggggactccaactcagataccggtg 142
>gb|AC008258.4|AC008258 Drosophila melanogaster, chromosome 2R, region 43C-43C, BAC clone BACR04G20, complete sequence Length = 184079 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cggtggtggtgctaaagctct 89 ||||||||||||||||||||| Sbjct: 59581 cggtggtggtgctaaagctct 59561
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 149855 acggccgcctcatcatcgacttcat 149879
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 58723 acggccgcctcatcatcgacttcat 58747
>dbj|AK102591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F21, full insert sequence Length = 2163 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 285 acggccgcctcatcatcgacttcat 309
>dbj|AK100754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118N06, full insert sequence Length = 1294 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 294 acggccgcctcatcatcgacttcat 318
>dbj|AK072891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147C03, full insert sequence Length = 3569 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 258 acggccgcctcatcatcgacttcat 282
>dbj|AK068077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135A09, full insert sequence Length = 1424 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 325 acggccgcctcatcatcgacttcat 349
>dbj|AK064049.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E02, full insert sequence Length = 1453 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 314 acggccgcctcatcatcgacttcat 338
>dbj|AK062640.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-D07, full insert sequence Length = 747 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 255 acggccgcctcatcatcgacttcat 279
>dbj|AK062412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F03, full insert sequence Length = 957 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 acggccgcctcaccatcgacttcat 273 |||||||||||| |||||||||||| Sbjct: 314 acggccgcctcatcatcgacttcat 338
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence Length = 1313 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 196 gcagccgccctacggccggaccttcttcggcatgccg 232 |||||||||||||||| ||||| |||||||| |||| Sbjct: 271 gcagccgccctacggcgagacctacttcggcacgccg 307
>gb|AE003841.5| Drosophila melanogaster chromosome 2R, section 9 of 73 of the complete sequence Length = 266427 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cggtggtggtgctaaagctct 89 ||||||||||||||||||||| Sbjct: 215845 cggtggtggtgctaaagctct 215825
>gb|AC004280.1|AC004280 Drosophila melanogaster DNA sequence (P1 DS01142 (D148)), complete sequence Length = 78174 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cggtggtggtgctaaagctct 89 ||||||||||||||||||||| Sbjct: 23911 cggtggtggtgctaaagctct 23891
>emb|AL772378.8| Mouse DNA sequence from clone RP23-106C4 on chromosome X, complete sequence Length = 109193 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 443 ctccagcagttcatcaacagg 463 ||||||||||||||||||||| Sbjct: 39232 ctccagcagttcatcaacagg 39212
>emb|AJ421480.1| Mus musculus X-inactivation center region; segment 3/3 Length = 214384 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 443 ctccagcagttcatcaacagg 463 ||||||||||||||||||||| Sbjct: 110537 ctccagcagttcatcaacagg 110557
>ref|NM_121376.2| Arabidopsis thaliana SIGD (SIGMA-LIKE FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor AT5G13730 (SIGD) mRNA, complete cds Length = 1785 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gctcatccatccatggcgac 42 |||||||||||||||||||| Sbjct: 79 gctcatccatccatggcgac 98
>gb|BC042513.1| Mus musculus solute carrier family 43, member 2, mRNA (cDNA clone MGC:28931 IMAGE:3964020), complete cds Length = 4389 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 3416 acagccccatttccctggac 3397
>ref|XM_509718.1| PREDICTED: Pan troglodytes similar to voltage gated channel like 1; four repeat voltage-gated ion channel (LOC452643), mRNA Length = 6190 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tgtgtcctgttgctggcggt 72 |||||||||||||||||||| Sbjct: 2376 tgtgtcctgttgctggcggt 2357
>ref|XM_475626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 504 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 358 ttcaacttcggcgactccaactccgacaccgg 389
>ref|XM_475624.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1296 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 304 ttcaacttcggcgactccaactccgacaccgg 335
>ref|XM_466604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 133 catcttcaacctcggtgactccaactcggacaccgg 168 ||||| |||| |||| ||||||| |||||||||||| Sbjct: 150 catctacaacttcggggactccatctcggacaccgg 185
>ref|NM_191652.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3399 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 3062 actccaactcggacaccggt 3043
>ref|NM_192764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccctacggccggaccttcttcggc 226 |||||||||| ||||||||||||| Sbjct: 334 ccctacggccagaccttcttcggc 357
>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017J22, complete sequence Length = 177153 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 76137 ttcaacttcggcgactccaactccgacaccgg 76106 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 65452 ttcaacttcggcgactccaactccgacaccgg 65421
>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0034O12, complete sequence Length = 156263 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 12286 ttcaacttcggcgactccaactccgacaccgg 12255 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 1601 ttcaacttcggcgactccaactccgacaccgg 1570
>ref|XM_364340.1| Magnaporthe grisea 70-15 predicted protein (MG09185.4) partial mRNA Length = 3639 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 198 tgttgctggcggtggtggtg 179
>ref|NM_052867.2| Homo sapiens voltage gated channel like 1 (VGCNL1), mRNA Length = 6923 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tgtgtcctgttgctggcggt 72 |||||||||||||||||||| Sbjct: 2211 tgtgtcctgttgctggcggt 2192
>gb|BC012128.1| Homo sapiens voltage gated channel like 1, mRNA (cDNA clone IMAGE:4551336), with apparent retained intron Length = 2624 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tgtgtcctgttgctggcggt 72 |||||||||||||||||||| Sbjct: 2176 tgtgtcctgttgctggcggt 2157
>gb|AC121564.4| Mus musculus BAC clone RP23-214I6 from 5, complete sequence Length = 190110 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gttgctggcggtggtggtgc 80 |||||||||||||||||||| Sbjct: 97333 gttgctggcggtggtggtgc 97314
>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08, complete sequence Length = 118049 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 13937 ttcaacttcggcgactccaactccgacaccgg 13906 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 3252 ttcaacttcggcgactccaactccgacaccgg 3221
>emb|AL138707.10| Human DNA sequence from clone RP11-430M15 on chromosome 13 Contains the 3' end of a novel gene (FLJ22153) and the 3' end of the gene for a novel protein (ortholog of rat putative four repeat ion channel), complete sequence Length = 181311 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tgtgtcctgttgctggcggt 72 |||||||||||||||||||| Sbjct: 95562 tgtgtcctgttgctggcggt 95581
>gb|AY141972.1| Homo sapiens putative 4 repeat voltage-gated ion channel (VGCNL1) mRNA, complete cds Length = 5347 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 tgtgtcctgttgctggcggt 72 |||||||||||||||||||| Sbjct: 2105 tgtgtcctgttgctggcggt 2086
>emb|AL591440.7| Mouse DNA sequence from clone RP23-136K12 on chromosome 11 Contains the Crk gene for v-crk sarcoma virus CT10 oncogene homolog (avian), the Myo1c gene for myosin IC, the Pps gene for putative phosphatase, the Pitpn gene for phosphatidylinositol transfer protein, a cytochrome c oxidase, subunit VIIc (Cox7c) pseudogene, a novel gene, the 3' end of the gene for a novel protein similar to solute carrier family 43 member 1 Slc43a1 and five CpG islands, complete sequence Length = 157466 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 141998 acagccccatttccctggac 142017
>gb|AC000400.1| Genomic sequence from Mouse 11, complete sequence Length = 78748 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 48164 acagccccatttccctggac 48145
>dbj|AK143773.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430106G01 product:weakly similar to Prostate cancer overexpressed gene 1 (Hypothetical protein) [Mus musculus], full insert sequence Length = 4113 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 3518 acagccccatttccctggac 3499
>gb|AY059907.1| Arabidopsis thaliana sigma-like factor (MSH12.20) mRNA, complete cds Length = 1383 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gctcatccatccatggcgac 42 |||||||||||||||||||| Sbjct: 77 gctcatccatccatggcgac 96
>dbj|AK158440.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930117D19 product:hypothetical protein, full insert sequence Length = 2601 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 2401 acagccccatttccctggac 2382
>tpg|BK005643.1| TPA: TPA_exp: Mus musculus LAT4 mRNA, complete cds Length = 4389 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 3416 acagccccatttccctggac 3397
>gb|DQ012406.1| Digitalis lanata lanatoside 15-O-acetylesterase mRNA, complete cds Length = 1188 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 131 gccatcttcaacctcggtgactccaactcggacaccggtg 170 ||||| |||||| |||| ||||||||||| || ||||||| Sbjct: 120 gccattttcaacttcggggactccaactcagataccggtg 159
>gb|AF181798.1|AF181798 Phoradendron forestierae 26S ribosomal RNA, partial sequence Length = 402 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 gcagctccagcagttcatcaacag 462 ||||||| |||||||||||||||| Sbjct: 266 gcagctcaagcagttcatcaacag 243
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 84003 actccaactcggacaccggt 83984
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 202 actccaactcggacaccggt 183
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gcatgccggccggccggcaa 244 |||||||||||||||||||| Sbjct: 15434 gcatgccggccggccggcaa 15453
>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0469E09 Length = 146081 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gcatgccggccggccggcaa 244 |||||||||||||||||||| Sbjct: 143707 gcatgccggccggccggcaa 143726
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccctacggccggaccttcttcggc 226 |||||||||| ||||||||||||| Sbjct: 133709 ccctacggccagaccttcttcggc 133732
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ccctacggccggaccttcttcggc 226 |||||||||| ||||||||||||| Sbjct: 55049 ccctacggccagaccttcttcggc 55072
>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1669_F01 Length = 140019 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 133 catcttcaacctcggtgactccaactcggacaccgg 168 ||||| |||| |||| ||||||| |||||||||||| Sbjct: 112625 catctacaacttcggggactccatctcggacaccgg 112660
>dbj|AB021119.1| Arabidopsis thaliana sigD gene for RNA polymerase sigma subunit SigD and spliced variant SigD*, complete cds Length = 2975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gctcatccatccatggcgac 42 |||||||||||||||||||| Sbjct: 507 gctcatccatccatggcgac 526
>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12 Length = 79259 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 gctcatccatccatggcgac 42 |||||||||||||||||||| Sbjct: 73962 gctcatccatccatggcgac 73943
>dbj|AK070004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G06, full insert sequence Length = 2363 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 2296 actccaactcggacaccggt 2277
>dbj|AK067837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E10, full insert sequence Length = 1740 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 137 ttcaacctcggtgactccaactcggacaccgg 168 |||||| |||| ||||||||||| |||||||| Sbjct: 396 ttcaacttcggcgactccaactccgacaccgg 427
>dbj|AK066981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092D23, full insert sequence Length = 3863 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 3235 actccaactcggacaccggt 3216
>dbj|AK065826.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036F01, full insert sequence Length = 3286 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 actccaactcggacaccggt 169 |||||||||||||||||||| Sbjct: 3219 actccaactcggacaccggt 3200
>gb|AF101075.1|AF101075 Arabidopsis thaliana sigma-like factor (SIG4) mRNA, complete cds Length = 1350 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gctcatccatccatggcgac 42 |||||||||||||||||||| Sbjct: 79 gctcatccatccatggcgac 98
>ref|NM_173388.1| Mus musculus solute carrier family 43, member 2 (Slc43a2), mRNA Length = 4389 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 acagccccatttccctggac 427 |||||||||||||||||||| Sbjct: 3416 acagccccatttccctggac 3397
>gb|DQ072269.1| Triticum aestivum cultivar Sunco ALMT1 (ALMT1) gene, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>gb|DQ072268.1| Triticum aestivum cultivar Spica ALMT1 (ALMT1) gene, complete cds Length = 3953 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>gb|DQ072267.1| Triticum aestivum cultivar Maringa ALMT1 (ALMT1) gene, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>gb|DQ072266.1| Triticum aestivum cultivar Janz ALMT1 (ALMT1) gene, complete cds Length = 3952 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>gb|DQ072265.1| Triticum aestivum cultivar Halberd ALMT1 (ALMT1) gene, complete cds Length = 3953 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>gb|DQ072262.1| Triticum aestivum cultivar Chinese Spring ALMT1 (ALMT1) gene, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>gb|DQ072261.1| Triticum aestivum cultivar ES8 ALMT1 (ALMT1) gene, complete cds Length = 3951 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 tgttgctggcggtggtggtg 79 |||||||||||||||||||| Sbjct: 2270 tgttgctggcggtggtggtg 2289
>dbj|AP004466.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09C23, TM0001, complete sequence Length = 103397 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 134 atcttcaacctcggtgactccaactcggacac 165 ||||||||| | ||||||||||| |||||||| Sbjct: 35062 atcttcaactttggtgactccaattcggacac 35031 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,300,857 Number of Sequences: 3902068 Number of extensions: 3300857 Number of successful extensions: 73291 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72486 Number of HSP's gapped (non-prelim): 794 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
