Clone Name | bart61b03 |
---|---|
Clone Library Name | barley_pub |
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 69.3 bits (168), Expect = 4e-12 Identities = 40/79 (50%), Positives = 46/79 (58%), Gaps = 3/79 (3%) Frame = +3 Query: 174 LLCALRHGGAQR---YEAIYSFGDSISDTGNLCVGGCPSWLTTGQSPYGETFFKRPTGRC 344 LLC L A + AI++FGDS SDTG P PYGETFF R TGR Sbjct: 17 LLCMLSLAYASETCDFPAIFNFGDSNSDTGGKAAAFYPL-----NPPYGETFFHRSTGRY 71 Query: 345 SDGRVIVDFLAEHFGLPLL 401 SDGR+I+DF+AE F LP L Sbjct: 72 SDGRLIIDFIAESFNLPYL 90
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 61.2 bits (147), Expect = 1e-09 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +3 Query: 192 HGGAQRYEAIYSFGDSISDTGNLCVGGCPSWLTTGQS--PYGETFFKRPTGRCSDGRVIV 365 H + AI++FGDS SDTG L GQ+ P+G +FF P GR DGR+++ Sbjct: 22 HAHQCHFPAIFNFGDSNSDTGGLSAA-------FGQAGPPHGSSFFGSPAGRYCDGRLVI 74 Query: 366 DFLAEHFGLPLLPA 407 DF+AE GLP L A Sbjct: 75 DFIAESLGLPYLSA 88
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 43.9 bits (102), Expect = 2e-04 Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%) Frame = +3 Query: 216 AIYSFGDSISDTGNLCVGGCPSWLTTGQSPYGETF-FKRPTGRCSDGRVIVDFLAEHFGL 392 A++ FGDS+ DTGN + + + PYG F F+ TGR S+G V D+LA++ G+ Sbjct: 204 AVFFFGDSVFDTGNN--NNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261 Query: 393 -PLLPA 407 ++PA Sbjct: 262 KEIVPA 267
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 40.8 bits (94), Expect = 0.001 Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%) Frame = +3 Query: 216 AIYSFGDSISDTGNLCVGGCPSWLTTGQSPYGETF-FKRPTGRCSDGRVIVDFLAEHFGL 392 A++ FGDSI DTGN + L PYG F TGR S+GRV D+++++ G+ Sbjct: 125 AVFFFGDSIFDTGN--NNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182 Query: 393 -PLLPA 407 ++PA Sbjct: 183 KEIVPA 188
>FA47B_HUMAN (Q8NA70) Protein FAM47B| Length = 645 Score = 30.8 bits (68), Expect = 1.4 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 15/92 (16%) Frame = -1 Query: 385 KCSARKSTMTRPSE--------------QRPVGRLKKVSP*GDCPVVSHDGQPPTQRLPV 248 +C AR+ T P+E + PV RL+ P PV S +PP R+ Sbjct: 165 RCEAREKTTEVPTESGKYPCGESCPRPPETPVSRLRPQLP--KTPVSSRRPEPPKTRVSS 222 Query: 247 SEMESPKL*MASYRCAPP-*RSAHSSTTVPSS 155 E PK ++S PP R++H P + Sbjct: 223 LRPEPPKTRVSSLHPEPPETRASHLRVDPPET 254
>MOAC_BRAJA (P94328) Molybdenum cofactor biosynthesis protein C| Length = 172 Score = 30.8 bits (68), Expect = 1.4 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -1 Query: 376 ARKSTMTRPSEQRPVGRLKKVSP*GDCPVVSHDGQPPTQRLPVSE 242 ARK + TRPS+ + L + G+ +V +P T+RL V+E Sbjct: 2 ARKPSKTRPSKAKSGPALTHIGATGEARMVDVSDKPATERLAVAE 46
>EHMT2_MOUSE (Q9Z148) Histone-lysine N-methyltransferase, H3 lysine-9 specific 3| (EC 2.1.1.43) (Histone H3-K9 methyltransferase 3) (H3-K9-HMTase 3) (Euchromatic histone-lysine N-methyltransferase 2) (HLA-B-associated transcript 8) (Protein G9a) Length = 1263 Score = 29.3 bits (64), Expect = 4.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 418 PAWTAGSSGSPKCSARKSTMTRPSEQRP 335 PA TA G PK + TM++PS +P Sbjct: 222 PATTAAQEGQPKVHRARKTMSKPSNGQP 249
>HBB_EULFU (P02053) Hemoglobin beta subunit (Hemoglobin beta chain)| (Beta-globin) Length = 146 Score = 28.9 bits (63), Expect = 5.3 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 351 GRVIVDFLAEHFGLPLLPAVQA 416 G V+V LAEHFG PAVQA Sbjct: 107 GNVLVVVLAEHFGNAFSPAVQA 128
>EDA_MOUSE (O54693) Ectodysplasin-A (EDA protein homolog) (Tabby protein)| [Contains: Ectodysplasin-A, membrane form; Ectodysplasin-A, secreted form] Length = 391 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/60 (28%), Positives = 22/60 (36%) Frame = -1 Query: 409 TAGSSGSPKCSARKSTMTRPSEQRPVGRLKKVSP*GDCPVVSHDGQPPTQRLPVSEMESP 230 T G P T++ P PVG P+ H GQP Q+ P+ E P Sbjct: 74 TESRLGGPGAPGTSGTLSSPGSLDPVG-----------PITRHLGQPSFQQQPLEPGEDP 122
>PHF22_MOUSE (Q9D168) Integrator complex subunit 12 (PHD finger protein 22)| Length = 461 Score = 28.9 bits (63), Expect = 5.3 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = -1 Query: 427 KSPPAWTAGSSGSPKCSARKSTMTRPSEQRPVGRLKKVSP*GDCPVVSHDGQPPTQRLPV 248 K+ + +GSS +A K + + +E+RP ++K V+ D P +P T+ P+ Sbjct: 72 KTSSSLPSGSSNGKVLTAEK--IKKEAEKRPADKMKDVTEGIDVPKKPRLEKPETRSSPI 129 Query: 247 SEMESPKL*MA 215 + S L MA Sbjct: 130 TVQTSKDLSMA 140
>SYV_HALMA (Q5V1H0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 901 Score = 28.5 bits (62), Expect = 6.9 Identities = 16/53 (30%), Positives = 18/53 (33%) Frame = -1 Query: 418 PAWTAGSSGSPKCSARKSTMTRPSEQRPVGRLKKVSP*GDCPVVSHDGQPPTQ 260 P W G P + R EQ PV L P CP HD P + Sbjct: 444 PVWYCDDCGEPVMAER--------EQLPVDPLSDAPPVDSCPECGHDSLTPEE 488
>HD_FUGRU (P51112) Huntingtin (Huntington disease protein homolog) (HD protein)| Length = 3148 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 208 RCAPP*RSAHSSTTVPSSAALIVAM 134 + +P RSAHS VP S ++IVAM Sbjct: 2937 KASPAARSAHSDPQVPDSESIIVAM 2961
>PHF22_RAT (Q68FR3) Integrator complex subunit 12 (PHD finger protein 22)| Length = 461 Score = 28.1 bits (61), Expect = 9.0 Identities = 19/71 (26%), Positives = 34/71 (47%) Frame = -1 Query: 427 KSPPAWTAGSSGSPKCSARKSTMTRPSEQRPVGRLKKVSP*GDCPVVSHDGQPPTQRLPV 248 K+ + +GSS +A K + + +E+RP ++K + D P +P T+ P+ Sbjct: 72 KTSSSLPSGSSNGKVLAAEK--LKKEAEKRPADKMKDATEGVDVPKKPRLEKPETRSSPI 129 Query: 247 SEMESPKL*MA 215 + S L MA Sbjct: 130 TVQTSKDLAMA 140
>HPS4_MOUSE (Q99KG7) Hermansky-Pudlak syndrome 4 protein homolog (Light-ear| protein) (Le protein) Length = 671 Score = 28.1 bits (61), Expect = 9.0 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -1 Query: 343 QRPVGRLKKVSP*GDCPVVSHDGQPPTQRLPVSEMESPKL*MASYRCAPP*RSA 182 Q PVG V P G+ SH P + R P S SP ++ +P R A Sbjct: 446 QHPVGVEPSVEPYGNGAQESHSALPRSSRSPDSPGPSPSADRTGFKPSPSGRHA 499 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,771,651 Number of Sequences: 219361 Number of extensions: 770651 Number of successful extensions: 2620 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2528 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2614 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)