ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart61a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF026538.1|AF026538 Hordeum vulgare ABA-responsive protein mR... 666 0.0
2gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence 44 0.35
3gb|AC022308.17|AC022308 Homo sapiens chromosome 15 clone RP11-34... 44 0.35
4gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
5ref|XM_987567.1| PREDICTED: Mus musculus hypothetical protein LO... 42 1.4
6emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome 42 1.4
7gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 42 1.4
8gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 1.4
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
10gb|AC090884.1|AC090884 Homo sapiens chromosome 3 clone RP11-165B... 42 1.4
11gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cance... 42 1.4
12gb|AC004755.2|AC004755 Homo sapiens chromosome 19, fosmid FOS375... 42 1.4
13gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p,... 42 1.4
14gb|AC069462.3| Homo sapiens chromosome 3 clone RP11-271E2 map 3p... 42 1.4
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
16emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chro... 42 1.4
17gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 5.5
18gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome ... 40 5.5
19gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CI... 40 5.5
20emb|AL954664.17| Human DNA sequence from clone LL0YNC03-56G10 on... 40 5.5
21emb|AL354913.11| Human DNA sequence from clone RP11-69O18 on chr... 40 5.5
22gb|AC135611.25| Pan troglodytes clone rp43-14h17, complete sequence 40 5.5
23gb|AF418189.1|AF418189 Desulfonatronum lacustre DSM 10312 dissim... 40 5.5
24emb|BX649323.12| Human DNA sequence from clone WI2-81109H8 on ch... 40 5.5
25gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.5
26gb|AC016830.5| Homo sapiens chromosome 22 clone b81b3 map 22q11,... 40 5.5
27gb|AC016027.15| Homo sapiens chromosome 22 clone b476c20 map 22q... 40 5.5
28emb|CR378267.1| Pinus pinaster SSR, clone PPD2A03 40 5.5
29emb|CR377502.1| Pinus pinaster SSR, clone PPA6D09 40 5.5
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
32gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, r... 40 5.5
33gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, r... 40 5.5
34emb|BX511099.12| Human DNA sequence from clone XX-82516H2 on chr... 40 5.5
35gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484... 40 5.5
36gb|AF215840.1|AF215840 Homo sapiens chromosome Y clone PPP2R3LY,... 40 5.5
37gb|AF215839.1|AF215839 Homo sapiens chromosome X clone PPP2R3LX ... 40 5.5
38gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosom... 40 5.5
39gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complet... 40 5.5
40dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
41dbj|AK070901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
42emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.5
43gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36... 40 5.5
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
45emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.5
46dbj|AB209137.1| Homo sapiens mRNA for NY-REN-8 antigen variant p... 40 5.5 
>gb|AF026538.1|AF026538 Hordeum vulgare ABA-responsive protein mRNA, complete cds
          Length = 1326

 Score =  666 bits (336), Expect = 0.0
 Identities = 351/356 (98%)
 Strand = Plus / Plus

                                                                       
Query: 35  atccaaccacctccaccatcacctccgtgctccccggggcacgcttcccctgtccgtccg 94
           |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| 
Sbjct: 1   atccaaccacctccaccatcacctccgtgctccccgtgccacgcttcccctgtccgtccc 60

                                                                       
Query: 95  agagctccaccagctagcagccatggacggcaagggctacaccacaccgccaaccgcgcc 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61  agagctccaccagctagcagccatggacggcaagggctacaccacaccgccgaccgcgcc 120

                                                                       
Query: 155 tgcgccacaggccgaggcaggagcgcctcacttctatcccccgacggagcacggcaccgc 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgccacaggccgaggcaggagcgcctcacttctatcccccgacggagcacggcaccgc 180

                                                                       
Query: 215 gccacagccgggatcgcaggtctcctatcccccgatgccaaaggccatggatggccagga 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccacagccgggatcgcaggtctcctatcccccgatgccaaaggccatggatggccagga 240

                                                                       
Query: 275 cgccgccgcgccacagccgggagcgccgccgcacccgtcctccccactcacgcagcaggc 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgccgccgcgccacagccgggagcgccgccgcacccgtcctccccactcacgcagcaggc 300

                                                                   
Query: 335 catggagctagagggcaagtacgccgccccacagccgggcactggagctacgccgt 390
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catggagctggagggcaagtacgccgccccacagccgggcactggagctacgccgt 356
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>gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence
          Length = 160981

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 41    ccacctccaccatcacctccgt 62
             ||||||||||||||||||||||
Sbjct: 26657 ccacctccaccatcacctccgt 26636
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>gb|AC022308.17|AC022308 Homo sapiens chromosome 15 clone RP11-34L4, complete sequence
          Length = 166226

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 41     ccacctccaccatcacctccgt 62
              ||||||||||||||||||||||
Sbjct: 158253 ccacctccaccatcacctccgt 158232
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>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18,
              complete sequence
          Length = 143163

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     ccacctccaccatcacctccg 61
              |||||||||||||||||||||
Sbjct: 132774 ccacctccaccatcacctccg 132754
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>ref|XM_987567.1| PREDICTED: Mus musculus hypothetical protein LOC666995 (LOC666995),
           mRNA
          Length = 543

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 40  accacctccaccatcacctcc 60
           |||||||||||||||||||||
Sbjct: 88  accacctccaccatcacctcc 108
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>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 299    gccgccgcacccgtcctccccactc 323
              ||||||||||||| |||||||||||
Sbjct: 235720 gccgccgcacccggcctccccactc 235696
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>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     accacctccaccatcacctcc 60
              |||||||||||||||||||||
Sbjct: 172133 accacctccaccatcacctcc 172113
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     cgccaaccgcgcctgcgccac 162
               |||||||||||||||||||||
Sbjct: 2482029 cgccaaccgcgcctgcgccac 2482009
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 41       ccacctccaccatcacctccg 61
                |||||||||||||||||||||
Sbjct: 12371401 ccacctccaccatcacctccg 12371421
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>gb|AC090884.1|AC090884 Homo sapiens chromosome 3 clone RP11-165B2 map 3p, complete sequence
          Length = 166991

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    accacctccaccatcacctcc 60
             |||||||||||||||||||||
Sbjct: 16435 accacctccaccatcacctcc 16415
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>gb|AC155722.9| Mus musculus 6 BAC RP24-204J8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 198481

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     accacctccaccatcacctcc 60
              |||||||||||||||||||||
Sbjct: 143548 accacctccaccatcacctcc 143568



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     accacctccaccatcacctcc 60
              |||||||||||||||||||||
Sbjct: 143527 accacctccaccatcacctcc 143547
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>gb|AC004755.2|AC004755 Homo sapiens chromosome 19, fosmid FOS37502 (LLfos-27A6) and 3'
            overlapping PCR product, complete sequence
          Length = 41159

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 40   accacctccaccatcacctcc 60
            |||||||||||||||||||||
Sbjct: 2093 accacctccaccatcacctcc 2073
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>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence
          Length = 161014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    accacctccaccatcacctcc 60
             |||||||||||||||||||||
Sbjct: 90471 accacctccaccatcacctcc 90491
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>gb|AC069462.3| Homo sapiens chromosome 3 clone RP11-271E2 map 3p, complete sequence
          Length = 161577

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     accacctccaccatcacctcc 60
              |||||||||||||||||||||
Sbjct: 105648 accacctccaccatcacctcc 105628
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 41       ccacctccaccatcacctccg 61
                |||||||||||||||||||||
Sbjct: 12378741 ccacctccaccatcacctccg 12378761
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>emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chromosome 4, complete
              sequence
          Length = 199350

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     accacctccaccatcacctcc 60
              |||||||||||||||||||||
Sbjct: 121591 accacctccaccatcacctcc 121571
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 316     ccccactcacgcagcaggccatgg 339
               |||||||||||| |||||||||||
Sbjct: 3489223 ccccactcacgcggcaggccatgg 3489246
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>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence
          Length = 233904

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     accacctccaccatcacctc 59
              ||||||||||||||||||||
Sbjct: 118712 accacctccaccatcacctc 118693
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>gb|AC004605.1|HUAC004605 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-248F7, complete
             sequence
          Length = 259474

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ccacctccaccatcacctcc 60
             ||||||||||||||||||||
Sbjct: 51042 ccacctccaccatcacctcc 51023
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>emb|AL954664.17| Human DNA sequence from clone LL0YNC03-56G10 on chromosome X Contains
             the 3' end of the gene for protein phosphatase 2A 48 kDa
             regulatory subunit (PR48), a novel gene and five CpG
             islands, complete sequence
          Length = 39200

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 21315 cacccgtcctccccactcac 21296



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 21266 cacccgtcctccccactcac 21247
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>emb|AL354913.11| Human DNA sequence from clone RP11-69O18 on chromosome 6 Contains a
             pseudogene similar to part of glucosaminyl (N-acetyl)
             transferase 1 (GCNT1), complete sequence
          Length = 106233

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    taatccaaccacctccacca 52
             ||||||||||||||||||||
Sbjct: 86476 taatccaaccacctccacca 86457
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>gb|AC135611.25| Pan troglodytes clone rp43-14h17, complete sequence
          Length = 215721

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    cccacagccgggcactggag 381
              ||||||||||||||||||||
Sbjct: 134261 cccacagccgggcactggag 134280
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>gb|AF418189.1|AF418189 Desulfonatronum lacustre DSM 10312 dissimilatory sulfite reductase
            alpha subunit (dsrA) and dissimilatory sulfite reductase
            beta subunit (dsrB) genes, partial cds
          Length = 1905

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 322  tcacgcagcaggccatggag 341
            ||||||||||||||||||||
Sbjct: 1693 tcacgcagcaggccatggag 1674
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>emb|BX649323.12| Human DNA sequence from clone WI2-81109H8 on chromosome X, complete
             sequence
          Length = 37892

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 16162 cacccgtcctccccactcac 16143



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 16113 cacccgtcctccccactcac 16094
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     cgccgccgcgccacagccgg 294
               ||||||||||||||||||||
Sbjct: 2358409 cgccgccgcgccacagccgg 2358390
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>gb|AC016830.5| Homo sapiens chromosome 22 clone b81b3 map 22q11, complete sequence
          Length = 192720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   cccacagccgggcactggag 381
             ||||||||||||||||||||
Sbjct: 47438 cccacagccgggcactggag 47457
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>gb|AC016027.15| Homo sapiens chromosome 22 clone b476c20 map 22q11, complete sequence
          Length = 174991

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   cccacagccgggcactggag 381
             ||||||||||||||||||||
Sbjct: 42735 cccacagccgggcactggag 42754
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>emb|CR378267.1| Pinus pinaster SSR, clone PPD2A03
          Length = 139

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  ccacctccaccatcacctcc 60
           ||||||||||||||||||||
Sbjct: 129 ccacctccaccatcacctcc 110
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>emb|CR377502.1| Pinus pinaster SSR, clone PPA6D09
          Length = 556

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  ccacctccaccatcacctcc 60
           ||||||||||||||||||||
Sbjct: 370 ccacctccaccatcacctcc 389
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 112      cagccatggacggcaagggctacaccac 139
                |||||||||||||||||| || ||||||
Sbjct: 17506152 cagccatggacggcaaggactccaccac 17506125
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 104      ccagctagcagccatggacg 123
                ||||||||||||||||||||
Sbjct: 21245442 ccagctagcagccatggacg 21245461
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>gb|AC008306.3|AC008306 Drosophila melanogaster, chromosome 2R, region 51B-51B, BAC clone
             BACR27M04, complete sequence
          Length = 169689

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    ccacctccaccatcacctcc 60
             ||||||||||||||||||||
Sbjct: 39331 ccacctccaccatcacctcc 39312
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>gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone
              BACR06D02, complete sequence
          Length = 172791

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ccacctccaccatcacctcc 60
              ||||||||||||||||||||
Sbjct: 107749 ccacctccaccatcacctcc 107730
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>emb|BX511099.12| Human DNA sequence from clone XX-82516H2 on chromosome X, complete
             sequence
          Length = 25946

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 11406 cacccgtcctccccactcac 11425



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 11357 cacccgtcctccccactcac 11376
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>gb|AC009120.8|AC009120 Homo sapiens chromosome 16 clone RP11-484E3, complete sequence
          Length = 195342

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ccacctccaccatcacctcc 60
             ||||||||||||||||||||
Sbjct: 24973 ccacctccaccatcacctcc 24992
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>gb|AF215840.1|AF215840 Homo sapiens chromosome Y clone PPP2R3LY, complete sequence
          Length = 27918

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 19743 cacccgtcctccccactcac 19724



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 19694 cacccgtcctccccactcac 19675
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>gb|AF215839.1|AF215839 Homo sapiens chromosome X clone PPP2R3LX map Xp22, complete sequence
          Length = 42584

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   cacccgtcctccccactcac 325
             ||||||||||||||||||||
Sbjct: 40950 cacccgtcctccccactcac 40931
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>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     accacctccaccatcacctc 59
              ||||||||||||||||||||
Sbjct: 170556 accacctccaccatcacctc 170575
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>gb|AC010093.8| Homo sapiens BAC clone RP11-323O5 from 2, complete sequence
          Length = 160930

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 276   gccgccgcgccacagccgggagcgccgc 303
             |||||||||||| |||||||||| ||||
Sbjct: 12722 gccgccgcgccaaagccgggagccccgc 12695
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>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0656E03
          Length = 181786

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ccagctagcagccatggacg 123
             ||||||||||||||||||||
Sbjct: 40818 ccagctagcagccatggacg 40837
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>dbj|AK070901.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O19, full
           insert sequence
          Length = 457

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 112 cagccatggacggcaagggctacaccac 139
           |||||||||||||||||| || ||||||
Sbjct: 100 cagccatggacggcaaggactccaccac 127
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    ggatggccaggacgccgccg 282
              ||||||||||||||||||||
Sbjct: 403773 ggatggccaggacgccgccg 403792
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>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete
              sequence
          Length = 254438

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ccacctccaccatcacctcc 60
              ||||||||||||||||||||
Sbjct: 143605 ccacctccaccatcacctcc 143586
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 112      cagccatggacggcaagggctacaccac 139
                |||||||||||||||||| || ||||||
Sbjct: 17460523 cagccatggacggcaaggactccaccac 17460496
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>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129619

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 112   cagccatggacggcaagggctacaccac 139
             |||||||||||||||||| || ||||||
Sbjct: 26254 cagccatggacggcaaggactccaccac 26281
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>dbj|AB209137.1| Homo sapiens mRNA for NY-REN-8 antigen variant protein
          Length = 5814

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  cacccgtcctccccactcac 325
            ||||||||||||||||||||
Sbjct: 1516 cacccgtcctccccactcac 1497



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  cacccgtcctccccactcac 325
            ||||||||||||||||||||
Sbjct: 1467 cacccgtcctccccactcac 1448


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,469,550
Number of Sequences: 3902068
Number of extensions: 2469550
Number of successful extensions: 75343
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74862
Number of HSP's gapped (non-prelim): 477
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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