>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score = 50.1 bits (25), Expect = 6e-04
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                               
Query: 27 agccggccatctcggtccggtccagctcaggcgagcc 63
          ||||| |||||||| |||| |||||||||||||||||
Sbjct: 1  agccgcccatctcgttccgttccagctcaggcgagcc 37

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      aaagccggccatctcggtcc 44
               ||||||||||||||||||||
Sbjct: 2760161 aaagccggccatctcggtcc 2760142

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aaagccggccatctcggtcc 44
              ||||||||||||||||||||
Sbjct: 280124 aaagccggccatctcggtcc 280143

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete
             sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 0.59
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aaagccggccatctcggtcc 44
             ||||||||||||||||||||
Sbjct: 57436 aaagccggccatctcggtcc 57455

>gb|AC129895.5| Homo sapiens chromosome 11, clone CTD-2634E19, complete sequence
          Length = 140077

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 16     gctcacaccaaagccggccatct 38
              |||||||||| ||||||||||||
Sbjct: 123081 gctcacaccacagccggccatct 123059

>emb|AJ296302.1|HSA296302 Homo sapiens partial TUB gene for mouse tubby homologue, exons 1-9
          Length = 40996

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 16  gctcacaccaaagccggccatct 38
           |||||||||| ||||||||||||
Sbjct: 159 gctcacaccacagccggccatct 137

>emb|AJ277662.1|HSA277662 Homo sapiens partial TUB gene for tubby (mouse) homolog and LMO1 gene
            for LIM domain only 1 protein
          Length = 174986

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 16   gctcacaccaaagccggccatct 38
            |||||||||| ||||||||||||
Sbjct: 6569 gctcacaccacagccggccatct 6591

>gb|AC116456.12| Homo sapiens chromosome 11, clone RP11-236J17, complete sequence
          Length = 146502

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 16     gctcacaccaaagccggccatct 38
              |||||||||| ||||||||||||
Sbjct: 126502 gctcacaccacagccggccatct 126524

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 35     atctcggtccggtccagc 52
              ||||||||||||||||||
Sbjct: 307682 atctcggtccggtccagc 307665

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 40      ggtccggtccagctcagg 57
               ||||||||||||||||||
Sbjct: 3092683 ggtccggtccagctcagg 3092666

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 19      cacaccaaagccggccat 36
               ||||||||||||||||||
Sbjct: 3545896 cacaccaaagccggccat 3545913

>dbj|AB031753.1| Streptomyces prasinopilosus gene for chitinase 19-2, partial cds,
           strain:JCM4404
          Length = 340

 Score = 36.2 bits (18), Expect = 9.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 39  cggtccggtccagctcag 56
           ||||||||||||||||||
Sbjct: 127 cggtccggtccagctcag 144


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 245,463
Number of Sequences: 3902068
Number of extensions: 245463
Number of successful extensions: 16186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16129
Number of HSP's gapped (non-prelim): 57
length of query: 63
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 42
effective length of database: 17,151,101,840
effective search space: 720346277280
effective search space used: 720346277280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)