ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart60h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK122064.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
2dbj|AK102900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
3dbj|AK073252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 347 2e-92
4dbj|AK105427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 291 1e-75
5gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome... 254 2e-64
6gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome... 254 2e-64
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 254 2e-64
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 254 2e-64
9dbj|AK093294.1| Homo sapiens cDNA FLJ35975 fis, clone TESTI2013401 50 0.006
10gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 48 0.025
11ref|NM_018114.4| Homo sapiens DALR anticodon binding domain cont... 46 0.098
12dbj|AK093204.1| Homo sapiens cDNA FLJ35885 fis, clone TESTI2009018 46 0.098
13gb|AC137630.9| Homo sapiens 3 BAC RP13-131K19 (Roswell Park Canc... 46 0.098
14gb|L39210.1|HUMIMPD Homo sapiens inosine monophosphate dehydroge... 46 0.098
15gb|AE004581.1| Pseudomonas aeruginosa PAO1, section 142 of 529 o... 44 0.39
16emb|X12644.1|PAFFS Pseudomonas aeruginosa ffs gene for 4.5S RNA 44 0.39
17emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.5
18gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 6.0
19gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 6.0
20gb|BC002864.2| Homo sapiens Down syndrome critical region gene 1... 40 6.0
21gb|AY325903.1| Homo sapiens calcipressin 1 large isoform (DSCR1)... 40 6.0
22gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.0
23dbj|AK092184.1| Homo sapiens cDNA FLJ34865 fis, clone NT2NE20141... 40 6.0
24dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 6.0
25dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.0
26ref|NM_004414.5| Homo sapiens Down syndrome critical region gene... 40 6.0
27gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosyn... 40 6.0
28emb|AJ332157.1|HSA332157 Homo sapiens genomic sequence surroundi... 40 6.0
29emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 6.0
30dbj|AP000327.3| Homo sapiens genomic DNA, chromosome 21 clone:RP... 40 6.0
31dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.0
32gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.0
33dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 6.0

>dbj|AK122064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115L08, full
           insert sequence
          Length = 1487

 Score =  347 bits (175), Expect = 2e-92
 Identities = 290/326 (88%), Gaps = 3/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 126 atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
           ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 30  atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 89

                                                                       
Query: 186 gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
           |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 90  gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 149

                                                                       
Query: 246 cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
           |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 150 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 209

                                                                       
Query: 306 tccgcgcacgggtccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag 365
           ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tccgcccacggctccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag 269

                                                                       
Query: 366 ctcgaggtgatgtcgccccccgccgagaccccggaccaaggatcagtcgctgtgggagt- 424
           |||||||||||||||||| |||  ||| |||| ||| |||||||  | ||||| ||||| 
Sbjct: 270 ctcgaggtgatgtcgccctccggtgaggcccccgacgaaggatctattgctgt-ggagtt 328

                                     
Query: 425 -cacatgccgcctatctgctccccgc 449
            ||||||||||||||||| |||||||
Sbjct: 329 ccacatgccgcctatctgttccccgc 354



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>dbj|AK102900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113A20, full
           insert sequence
          Length = 1130

 Score =  347 bits (175), Expect = 2e-92
 Identities = 290/326 (88%), Gaps = 3/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 126 atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
           ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 67  atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 126

                                                                       
Query: 186 gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
           |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 127 gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 186

                                                                       
Query: 246 cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
           |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 187 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 246

                                                                       
Query: 306 tccgcgcacgggtccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag 365
           ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tccgcccacggctccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag 306

                                                                       
Query: 366 ctcgaggtgatgtcgccccccgccgagaccccggaccaaggatcagtcgctgtgggagt- 424
           |||||||||||||||||| |||  ||| |||| ||| |||||||  | ||||| ||||| 
Sbjct: 307 ctcgaggtgatgtcgccctccggtgaggcccccgacgaaggatctattgctgt-ggagtt 365

                                     
Query: 425 -cacatgccgcctatctgctccccgc 449
            ||||||||||||||||| |||||||
Sbjct: 366 ccacatgccgcctatctgttccccgc 391



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>dbj|AK073252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023A06, full
           insert sequence
          Length = 1254

 Score =  347 bits (175), Expect = 2e-92
 Identities = 290/326 (88%), Gaps = 3/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 126 atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
           ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 34  atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 93

                                                                       
Query: 186 gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
           |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 94  gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 153

                                                                       
Query: 246 cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
           |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 154 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 213

                                                                       
Query: 306 tccgcgcacgggtccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag 365
           ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tccgcccacggctccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag 273

                                                                       
Query: 366 ctcgaggtgatgtcgccccccgccgagaccccggaccaaggatcagtcgctgtgggagt- 424
           |||||||||||||||||| |||  ||| |||| ||| |||||||  | ||||| ||||| 
Sbjct: 274 ctcgaggtgatgtcgccctccggtgaggcccccgacgaaggatctattgctgt-ggagtt 332

                                     
Query: 425 -cacatgccgcctatctgctccccgc 449
            ||||||||||||||||| |||||||
Sbjct: 333 ccacatgccgcctatctgttccccgc 358



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>dbj|AK105427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D01, full
           insert sequence
          Length = 1271

 Score =  291 bits (147), Expect = 1e-75
 Identities = 232/258 (89%), Gaps = 3/258 (1%)
 Strand = Plus / Plus

                                                                       
Query: 194 ccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccggcccgacgc 253
           |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 89  ccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgccccgacgc 148

                                                                       
Query: 254 ccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcctccgcgca 313
            || |||| |||||| |||||||| ||||||||||| |||| |||||| |||||||| ||
Sbjct: 149 gcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcctccgccca 208

                                                                       
Query: 314 cgggtccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaagctcgaggt 373
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 cggctccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaagctcgaggt 268

                                                                       
Query: 374 gatgtcgccccccgccgagaccccggaccaaggatcagtcgctgtgggagt--cacatgc 431
           |||||||||| |||  ||| |||| ||| |||||||  | ||||| |||||  |||||||
Sbjct: 269 gatgtcgccctccggtgaggcccccgacgaaggatctattgctgt-ggagttccacatgc 327

                             
Query: 432 cgcctatctgctccccgc 449
           |||||||||| |||||||
Sbjct: 328 cgcctatctgttccccgc 345



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>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0046A04, complete sequence
          Length = 141001

 Score =  254 bits (128), Expect = 2e-64
 Identities = 197/220 (89%)
 Strand = Plus / Plus

                                                                         
Query: 126   atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
             ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 82060 atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 82119

                                                                         
Query: 186   gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
             |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 82120 gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 82179

                                                                         
Query: 246   cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
             |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 82180 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 82239

                                                     
Query: 306   tccgcgcacgggtccgccctcgtccgcctcggcgacaccg 345
             ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 82240 tccgcccacggctccgccctcgtccgcctcggcgacaccg 82279



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                         
Query: 345   gccatgctcgcgtcgatcaagctcgaggtgatgtcgccccccgccgagaccccggaccaa 404
             ||||||||||||||||||||||||||||||||||||||| |||  ||| |||| ||| ||
Sbjct: 82394 gccatgctcgcgtcgatcaagctcgaggtgatgtcgccctccggtgaggcccccgacgaa 82453

                  
Query: 405   ggatc 409
             |||||
Sbjct: 82454 ggatc 82458



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 425   cacatgccgcctatctgctccccgc 449
             ||||||||||||||||| |||||||
Sbjct: 82577 cacatgccgcctatctgttccccgc 82601



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>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007C02, complete sequence
          Length = 148265

 Score =  254 bits (128), Expect = 2e-64
 Identities = 197/220 (89%)
 Strand = Plus / Minus

                                                                         
Query: 126   atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
             ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 14129 atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 14070

                                                                         
Query: 186   gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
             |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 14069 gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 14010

                                                                         
Query: 246   cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
             |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 14009 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 13950

                                                     
Query: 306   tccgcgcacgggtccgccctcgtccgcctcggcgacaccg 345
             ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 13949 tccgcccacggctccgccctcgtccgcctcggcgacaccg 13910



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 345   gccatgctcgcgtcgatcaagctcgaggtgatgtcgccccccgccgagaccccggaccaa 404
             ||||||||||||||||||||||||||||||||||||||| |||  ||| |||| ||| ||
Sbjct: 13795 gccatgctcgcgtcgatcaagctcgaggtgatgtcgccctccggtgaggcccccgacgaa 13736

                  
Query: 405   ggatc 409
             |||||
Sbjct: 13735 ggatc 13731



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 425   cacatgccgcctatctgctccccgc 449
             ||||||||||||||||| |||||||
Sbjct: 13612 cacatgccgcctatctgttccccgc 13588



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  254 bits (128), Expect = 2e-64
 Identities = 197/220 (89%)
 Strand = Plus / Plus

                                                                            
Query: 126      atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
                ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 11880333 atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 11880392

                                                                            
Query: 186      gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
                |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 11880393 gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 11880452

                                                                            
Query: 246      cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
                |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 11880453 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 11880512

                                                        
Query: 306      tccgcgcacgggtccgccctcgtccgcctcggcgacaccg 345
                ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 11880513 tccgcccacggctccgccctcgtccgcctcggcgacaccg 11880552



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 345      gccatgctcgcgtcgatcaagctcgaggtgatgtcgccccccgccgagaccccggaccaa 404
                ||||||||||||||||||||||||||||||||||||||| |||  ||| |||| ||| ||
Sbjct: 11880667 gccatgctcgcgtcgatcaagctcgaggtgatgtcgccctccggtgaggcccccgacgaa 11880726

                     
Query: 405      ggatc 409
                |||||
Sbjct: 11880727 ggatc 11880731



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 425      cacatgccgcctatctgctccccgc 449
                ||||||||||||||||| |||||||
Sbjct: 11880850 cacatgccgcctatctgttccccgc 11880874



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  254 bits (128), Expect = 2e-64
 Identities = 197/220 (89%)
 Strand = Plus / Plus

                                                                            
Query: 126      atggccgcggagaccgacgcgacggcgcccggcgggctcgcgggggagatggaggtcgag 185
                ||||| |||||| || | || |||||| ||||||| ||||| || ||||||||||| |||
Sbjct: 11958740 atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag 11958799

                                                                            
Query: 186      gcgtaccgccgcctcttccccctcgcgttcctcgagcgccacctccgcgagtccgtccgg 245
                |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 11958800 gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc 11958859

                                                                            
Query: 246      cccgacgcccgacgcctcgccgaagcccgccccaccaccgtcgcgctcggcgccgtctcc 305
                |||||||| || |||| |||||| |||||||| ||||||||||| |||| |||||| |||
Sbjct: 11958860 cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc 11958919

                                                        
Query: 306      tccgcgcacgggtccgccctcgtccgcctcggcgacaccg 345
                ||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 11958920 tccgcccacggctccgccctcgtccgcctcggcgacaccg 11958959



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 345      gccatgctcgcgtcgatcaagctcgaggtgatgtcgccccccgccgagaccccggaccaa 404
                ||||||||||||||||||||||||||||||||||||||| |||  ||| |||| ||| ||
Sbjct: 11959074 gccatgctcgcgtcgatcaagctcgaggtgatgtcgccctccggtgaggcccccgacgaa 11959133

                     
Query: 405      ggatc 409
                |||||
Sbjct: 11959134 ggatc 11959138



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 425      cacatgccgcctatctgctccccgc 449
                ||||||||||||||||| |||||||
Sbjct: 11959257 cacatgccgcctatctgttccccgc 11959281



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>dbj|AK093294.1| Homo sapiens cDNA FLJ35975 fis, clone TESTI2013401
          Length = 1561

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 265 ccgaagcccgccccaccaccgtcgc 289
           |||||||||||||||||||||||||
Sbjct: 5   ccgaagcccgccccaccaccgtcgc 29



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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 248   cgacgcccgacgcctcgccgaagcccgc 275
             ||||||||||||||||||||| ||||||
Sbjct: 72167 cgacgcccgacgcctcgccgacgcccgc 72194



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>ref|NM_018114.4| Homo sapiens DALR anticodon binding domain containing 3 (DALRD3),
           transcript variant 2, mRNA
          Length = 2242

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 265 ccgaagcccgccccaccaccgtc 287
           |||||||||||||||||||||||
Sbjct: 43  ccgaagcccgccccaccaccgtc 65



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>dbj|AK093204.1| Homo sapiens cDNA FLJ35885 fis, clone TESTI2009018
          Length = 1752

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 265 ccgaagcccgccccaccaccgtc 287
           |||||||||||||||||||||||
Sbjct: 44  ccgaagcccgccccaccaccgtc 66



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>gb|AC137630.9| Homo sapiens 3 BAC RP13-131K19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 120173

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 265   ccgaagcccgccccaccaccgtc 287
             |||||||||||||||||||||||
Sbjct: 69461 ccgaagcccgccccaccaccgtc 69439



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>gb|L39210.1|HUMIMPD Homo sapiens inosine monophosphate dehydrogenase type II gene, complete
             cds
          Length = 10557

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 265   ccgaagcccgccccaccaccgtc 287
             |||||||||||||||||||||||
Sbjct: 10291 ccgaagcccgccccaccaccgtc 10313



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>gb|AE004581.1| Pseudomonas aeruginosa PAO1, section 142 of 529 of the complete genome
          Length = 13203

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 128   ggccgcggagaccgacgcgacg 149
             ||||||||||||||||||||||
Sbjct: 10498 ggccgcggagaccgacgcgacg 10477



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>emb|X12644.1|PAFFS Pseudomonas aeruginosa ffs gene for 4.5S RNA
          Length = 957

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 128 ggccgcggagaccgacgcgacg 149
           ||||||||||||||||||||||
Sbjct: 928 ggccgcggagaccgacgcgacg 907



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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 273    cgccccaccaccgtcgcgctcggcg 297
              ||||||||||||||||| |||||||
Sbjct: 169352 cgccccaccaccgtcgccctcggcg 169328



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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     cgcgacggcgcccggcgggc 162
               ||||||||||||||||||||
Sbjct: 1456935 cgcgacggcgcccggcgggc 1456954



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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   ccgtcgcgctcggcgccgtc 302
             ||||||||||||||||||||
Sbjct: 74916 ccgtcgcgctcggcgccgtc 74897



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>gb|BC002864.2| Homo sapiens Down syndrome critical region gene 1, mRNA (cDNA clone
           MGC:10263 IMAGE:3944959), complete cds
          Length = 2280

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 ccgccctcgtccgcctcggc 338
           ||||||||||||||||||||
Sbjct: 28  ccgccctcgtccgcctcggc 9



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>gb|AY325903.1| Homo sapiens calcipressin 1 large isoform (DSCR1) mRNA, complete
           cds
          Length = 2492

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 ccgccctcgtccgcctcggc 338
           ||||||||||||||||||||
Sbjct: 260 ccgccctcgtccgcctcggc 241



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 335     cggcgacaccgccatgctcg 354
               ||||||||||||||||||||
Sbjct: 3956940 cggcgacaccgccatgctcg 3956959



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>dbj|AK092184.1| Homo sapiens cDNA FLJ34865 fis, clone NT2NE2014104, highly similar
           to DOWN SYNDROME CRITICAL REGION PROTEIN 1
          Length = 2407

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 ccgccctcgtccgcctcggc 338
           ||||||||||||||||||||
Sbjct: 189 ccgccctcgtccgcctcggc 170



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>dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 26/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ccgccctcgtccgcctcggc 338
             ||||||||||||||||||||
Sbjct: 24614 ccgccctcgtccgcctcggc 24633



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 143     cgcgacggcgcccggcgggc 162
               ||||||||||||||||||||
Sbjct: 8315312 cgcgacggcgcccggcgggc 8315293



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 202     tccccctcgcgttcctcgagcgcc 225
               ||||||||||||||| ||||||||
Sbjct: 7491005 tccccctcgcgttccgcgagcgcc 7491028



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>ref|NM_004414.5| Homo sapiens Down syndrome critical region gene 1 (DSCR1),
           transcript variant 1, mRNA
          Length = 2457

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 ccgccctcgtccgcctcggc 338
           ||||||||||||||||||||
Sbjct: 209 ccgccctcgtccgcctcggc 190



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>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete
             cds
          Length = 77457

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   ccgacgcgacggcgcccggc 158
             ||||||||||||||||||||
Sbjct: 25620 ccgacgcgacggcgcccggc 25639



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>emb|AJ332157.1|HSA332157 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-VL15RS
          Length = 818

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 378 tcgccccccgccgagacccc 397
           ||||||||||||||||||||
Sbjct: 80  tcgccccccgccgagacccc 99



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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 319     ccgccctcgtccgcctcggcgaca 342
               |||||||||||| |||||||||||
Sbjct: 1837776 ccgccctcgtcctcctcggcgaca 1837753



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>dbj|AP000327.3| Homo sapiens genomic DNA, chromosome 21 clone:RP1-31L12, complete
             sequence
          Length = 35714

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ccgccctcgtccgcctcggc 338
             ||||||||||||||||||||
Sbjct: 23793 ccgccctcgtccgcctcggc 23812



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>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    ccgccctcgtccgcctcggc 338
              ||||||||||||||||||||
Sbjct: 206823 ccgccctcgtccgcctcggc 206842



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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     gccccaccaccgtcgcgctc 293
               ||||||||||||||||||||
Sbjct: 2297530 gccccaccaccgtcgcgctc 2297549



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     gccccaccaccgtcgcgctc 293
               ||||||||||||||||||||
Sbjct: 2295073 gccccaccaccgtcgcgctc 2295092



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     cgcgacggcgcccggcgggc 162
               ||||||||||||||||||||
Sbjct: 1917016 cgcgacggcgcccggcgggc 1917035



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>dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 6/9, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   ccgccctcgtccgcctcggc 338
             ||||||||||||||||||||
Sbjct: 16582 ccgccctcgtccgcctcggc 16601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,928,116
Number of Sequences: 3902068
Number of extensions: 1928116
Number of successful extensions: 43089
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42384
Number of HSP's gapped (non-prelim): 701
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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