ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart60f11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DBP_HUMAN (Q10586) D site-binding protein (Albumin D box-binding... 28 8.1

>DBP_HUMAN (Q10586) D site-binding protein (Albumin D box-binding protein)|
           (Albumin D-element-binding protein) (TAXREB302)
          Length = 325

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
 Frame = +1

Query: 334 GPHPAGDDDAPHRPK---GALRGRAGPIPR----VPLLWRR 435
           G   AG  DAP       G+ RGR GP+P      PLLW R
Sbjct: 67  GLETAGPADAPAGAVVGGGSPRGRPGPVPAPGLLAPLLWER 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,921,036
Number of Sequences: 219361
Number of extensions: 544038
Number of successful extensions: 2242
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2242
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top