ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart60f11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF021243.1|AF021243 Triticum aestivum eukaryotic translation initiation factor 4B (eIF4B) gene, complete cds Length = 4795 Score = 402 bits (203), Expect = e-109 Identities = 239/251 (95%) Strand = Plus / Plus Query: 193 cagcttccccagcctcaaggaggccgtcgtcgccggcggcggcaagcagaagaagaagaa 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 cagcttccccagcctcaaggaggccgtcgtcgccggcggcggcaagcagaagaagaagaa 980 Query: 253 gggcaccaccctctccctctcggagttcaccacctatggggccgccggcgcgcctcgccg 312 ||||||||||||||| ||||| |||||||||||||| || || ||||||||||||||||| Sbjct: 981 gggcaccaccctctcgctctccgagttcaccacctacggcgcggccggcgcgcctcgccg 1040 Query: 313 cgccgcccccgctgagcccaagggcctcaccccgcaggagatgatgatgctccccaccgg 372 || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1041 cgtcgcccccgccgagcccaagggcctcaccccgcaggagatgatgatgctccccaccgg 1100 Query: 373 cccaagggagcactccgaggaagagcaggaccgatcccgcgggttccgctcctatggcgg 432 ||| ||||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 1101 cccgagggagcgctcggaggacgagctggaccgatcccgcgggttccgctcctatggcgg 1160 Query: 433 cgacagggagc 443 ||||||||||| Sbjct: 1161 cgacagggagc 1171 Score = 228 bits (115), Expect = 1e-56 Identities = 128/131 (97%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 1 ccctcgattgttcgctcctgagcaccgacccaaccctagatctcgccagcagcagcgcga 60 |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 730 ccctcgattgttcgctcccgagcaccgacccaaccctagatctcgc-agcagcagcgcga 788 Query: 61 agccgacgccatgggcaagccctggggcggcgtcggcgcctgggcgctcgacgctgagcg 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 agccgacgccatggccaagccctggggcggcgtcggcgcctgggcgctcgacgctgagcg 848 Query: 121 cgaggacgagg 131 ||||||||||| Sbjct: 849 cgaggacgagg 859
>gb|AF136004.1|AF136004 Triticum aestivum eukaryotic initiation factor 4B (Eif4B) mRNA, partial cds Length = 1723 Score = 262 bits (132), Expect = 9e-67 Identities = 168/180 (93%) Strand = Plus / Plus Query: 264 tctccctctcggagttcaccacctatggggccgccggcgcgcctcgccgcgccgcccccg 323 |||| ||||| |||||||||||||| || || ||||||||||||||||||| |||||||| Sbjct: 1 tctcgctctccgagttcaccacctacggcgcggccggcgcgcctcgccgcgtcgcccccg 60 Query: 324 ctgagcccaagggcctcaccccgcaggagatgatgatgctccccaccggcccaagggagc 383 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 61 ccgagcccaagggcctcaccccgcaggagatgatgatgctccccaccggcccgagggagc 120 Query: 384 actccgaggaagagcaggaccgatcccgcgggttccgctcctatggcggcgacagggagc 443 ||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gctcggaggacgagctggaccgatcccgcgggttccgctcctatggcggcgacagggagc 180
>ref|XM_466529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 103 bits (52), Expect = 5e-19 Identities = 114/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 242 aagaagaagaagggcaccaccctctccctctcggagttcaccacctatggggccgccggc 301 |||||||||||||| ||||||||||| ||||| |||||||||||||| || ||||||| | Sbjct: 160 aagaagaagaaggggaccaccctctcgctctccgagttcaccacctacggcgccgccgcc 219 Query: 302 gcgcctcgccgcgccgcc---cccgctgagcccaagggcctcaccccgcaggagatgatg 358 | | || | ||||||| |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 220 gggaggcggcccgccgccgcggccgcggagcccaaggggctcacgccgcaggagatgatg 279 Query: 359 atgctccccaccgg 372 ||||| |||||||| Sbjct: 280 atgctgcccaccgg 293
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 103 bits (52), Expect = 5e-19 Identities = 114/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 242 aagaagaagaagggcaccaccctctccctctcggagttcaccacctatggggccgccggc 301 |||||||||||||| ||||||||||| ||||| |||||||||||||| || ||||||| | Sbjct: 23135891 aagaagaagaaggggaccaccctctcgctctccgagttcaccacctacggcgccgccgcc 23135950 Query: 302 gcgcctcgccgcgccgcc---cccgctgagcccaagggcctcaccccgcaggagatgatg 358 | | || | ||||||| |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 23135951 gggaggcggcccgccgccgcggccgcggagcccaaggggctcacgccgcaggagatgatg 23136010 Query: 359 atgctccccaccgg 372 ||||| |||||||| Sbjct: 23136011 atgctgcccaccgg 23136024 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 ggaggccgtcgtcgccggcggcggca 236 |||||||||| ||||||||||||||| Sbjct: 30124291 ggaggccgtcctcgccggcggcggca 30124316 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 428 ggcggcgacagggagcgcggcg 449 |||||||||||||||||||||| Sbjct: 17905438 ggcggcgacagggagcgcggcg 17905459 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cggcaagcagaagaagaagaaggg 255 ||||||| |||||||||||||||| Sbjct: 29283956 cggcaagaagaagaagaagaaggg 29283979 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 227 ggcggcggcaagcagaagaagaagaagg 254 |||||||||||| || |||||||||||| Sbjct: 5183903 ggcggcggcaagaagcagaagaagaagg 5183876
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 103 bits (52), Expect = 5e-19 Identities = 114/134 (85%), Gaps = 3/134 (2%) Strand = Plus / Plus Query: 242 aagaagaagaagggcaccaccctctccctctcggagttcaccacctatggggccgccggc 301 |||||||||||||| ||||||||||| ||||| |||||||||||||| || ||||||| | Sbjct: 102929 aagaagaagaaggggaccaccctctcgctctccgagttcaccacctacggcgccgccgcc 102988 Query: 302 gcgcctcgccgcgccgcc---cccgctgagcccaagggcctcaccccgcaggagatgatg 358 | | || | ||||||| |||| ||||||||||| ||||| ||||||||||||||| Sbjct: 102989 gggaggcggcccgccgccgcggccgcggagcccaaggggctcacgccgcaggagatgatg 103048 Query: 359 atgctccccaccgg 372 ||||| |||||||| Sbjct: 103049 atgctgcccaccgg 103062
>ref|XM_472902.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1641 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 312 gcgccgcccccgctgagcccaagggcctcaccccgcaggagatgatgatgctccccaccg 371 |||||||||||| || || | ||| |||||||| |||||||||||||||| ||||||| Sbjct: 260 gcgccgcccccgtggatccgagggggctcacccccgaggagatgatgatgctgcccaccg 319 Query: 372 gcccaagggagcactccgaggaagagcaggaccgatcccgcgggttccgctcctatggcg 431 |||| ||||||| ||||| || |||| ||||| ||||| |||||||||||||| |||| Sbjct: 320 gccccagggagcgctccgccgaggagctcgaccgctcccgagggttccgctcctacggcg 379 Query: 432 g 432 | Sbjct: 380 g 380 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 77 aagccctggggcggcgtcggcgcctgggcgctcgacgctgagcgcg 122 ||||||||||| ||||||||||| |||||||| ||||| ||||||| Sbjct: 7 aagccctggggaggcgtcggcgcgtgggcgctggacgcggagcgcg 52 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 227 ggcggcggcaagcagaagaagaagaa---gggcaccaccctctccctctcggagttca 281 ||||| |||||||||||||||||||| |||||||||||| || || || ||||||| Sbjct: 163 ggcgggggcaagcagaagaagaagaacaagggcaccaccctgtcgctgtccgagttca 220
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 312 gcgccgcccccgctgagcccaagggcctcaccccgcaggagatgatgatgctccccaccg 371 |||||||||||| || || | ||| |||||||| |||||||||||||||| ||||||| Sbjct: 153641 gcgccgcccccgtggatccgagggggctcacccccgaggagatgatgatgctgcccaccg 153700 Query: 372 gcccaagggagcactccgaggaagagcaggaccgatcccgcgggttccgctcctatggcg 431 |||| ||||||| ||||| || |||| ||||| ||||| |||||||||||||| |||| Sbjct: 153701 gccccagggagcgctccgccgaggagctcgaccgctcccgagggttccgctcctacggcg 153760 Query: 432 g 432 | Sbjct: 153761 g 153761 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 77 aagccctggggcggcgtcggcgcctgggcgctcgacgctgagcgcg 122 ||||||||||| ||||||||||| |||||||| ||||| ||||||| Sbjct: 153388 aagccctggggaggcgtcggcgcgtgggcgctggacgcggagcgcg 153433 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 227 ggcggcggcaagcagaagaagaagaa---gggcaccaccctctccctctcggagttca 281 ||||| |||||||||||||||||||| |||||||||||| || || || ||||||| Sbjct: 153544 ggcgggggcaagcagaagaagaagaacaagggcaccaccctgtcgctgtccgagttca 153601
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 89.7 bits (45), Expect = 7e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 312 gcgccgcccccgctgagcccaagggcctcaccccgcaggagatgatgatgctccccaccg 371 |||||||||||| || || | ||| |||||||| |||||||||||||||| ||||||| Sbjct: 23988668 gcgccgcccccgtggatccgagggggctcacccccgaggagatgatgatgctgcccaccg 23988727 Query: 372 gcccaagggagcactccgaggaagagcaggaccgatcccgcgggttccgctcctatggcg 431 |||| ||||||| ||||| || |||| ||||| ||||| |||||||||||||| |||| Sbjct: 23988728 gccccagggagcgctccgccgaggagctcgaccgctcccgagggttccgctcctacggcg 23988787 Query: 432 g 432 | Sbjct: 23988788 g 23988788 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 77 aagccctggggcggcgtcggcgcctgggcgctcgacgctgagcgcg 122 ||||||||||| ||||||||||| |||||||| ||||| ||||||| Sbjct: 23988415 aagccctggggaggcgtcggcgcgtgggcgctggacgcggagcgcg 23988460 Score = 48.1 bits (24), Expect = 0.025 Identities = 50/58 (86%), Gaps = 3/58 (5%) Strand = Plus / Plus Query: 227 ggcggcggcaagcagaagaagaagaa---gggcaccaccctctccctctcggagttca 281 ||||| |||||||||||||||||||| |||||||||||| || || || ||||||| Sbjct: 23988571 ggcgggggcaagcagaagaagaagaacaagggcaccaccctgtcgctgtccgagttca 23988628 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ggcggcaagcagaagaagaagaag 253 ||||| |||||||||||||||||| Sbjct: 24487557 ggcgggaagcagaagaagaagaag 24487580
>ref|XM_507607.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA Length = 620 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 134 ccggcggtggcaagcagaagaagaagaag 162
>ref|XM_507335.2| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.14 mRNA Length = 619 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 135 ccggcggtggcaagcagaagaagaagaag 163
>ref|XM_483765.1| Oryza sativa (japonica cultivar-group), mRNA Length = 619 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 135 ccggcggtggcaagcagaagaagaagaag 163
>dbj|AK099010.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F23, full insert sequence Length = 629 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 145 ccggcggtggcaagcagaagaagaagaag 173
>dbj|AK068626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154N05, full insert sequence Length = 619 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 135 ccggcggtggcaagcagaagaagaagaag 163
>dbj|AK059582.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B04, full insert sequence Length = 620 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 134 ccggcggtggcaagcagaagaagaagaag 162
>dbj|AK059234.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E11, full insert sequence Length = 510 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 114 ccggcggtggcaagcagaagaagaagaag 142
>dbj|AK058630.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C09, full insert sequence Length = 604 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| ||||||||||||||||||||| Sbjct: 132 ccggcggaggcaagcagaagaagaagaag 160
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Plus Query: 217 cgtcgtcgccggcggcggcaagc 239 ||||||||||||||||||||||| Sbjct: 256489 cgtcgtcgccggcggcggcaagc 256511
>ref|XM_467553.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1545 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 ggaggccgtcgtcgccggcggcggca 236 |||||||||| ||||||||||||||| Sbjct: 69 ggaggccgtcctcgccggcggcggca 94
>ref|XM_465852.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 428 ggcggcgacagggagcgcggcg 449 |||||||||||||||||||||| Sbjct: 98 ggcggcgacagggagcgcggcg 119
>ref|XM_479551.1| Oryza sativa (japonica cultivar-group), mRNA Length = 852 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gaggccgtcgtcgccggcggcg 233 |||||||||||||||||||||| Sbjct: 303 gaggccgtcgtcgccggcggcg 282
>gb|AC138196.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032M21 map C83B, complete sequence Length = 48636 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 39626 ccggcggaggcaagcagaagaagaag 39651
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 117175 ccggcggaggcaagcagaagaagaag 117150
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ggccgtcgtcgccggcggcggc 235 |||||||||||||||||||||| Sbjct: 2802297 ggccgtcgtcgccggcggcggc 2802318
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ggccgtcgtcgccggcggcggc 235 |||||||||||||||||||||| Sbjct: 984522 ggccgtcgtcgccggcggcggc 984543
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 240 agaagaagaagaagggcaccaccctc 265 |||||||||||||||||| ||||||| Sbjct: 96954 agaagaagaagaagggcatcaccctc 96929
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 240 agaagaagaagaagggcaccaccctc 265 |||||||||||||||||| ||||||| Sbjct: 32919 agaagaagaagaagggcatcaccctc 32944
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 208 caaggaggccgtcgtcgccggcggcggcaa 237 |||||||| |||||||| |||||||||||| Sbjct: 3340900 caaggaggtcgtcgtcgtcggcggcggcaa 3340929
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 ggccgtcgtcgccggcggcggc 235 |||||||||||||||||||||| Sbjct: 1498686 ggccgtcgtcgccggcggcggc 1498665
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 2505229 ccggcggaggcaagcagaagaagaag 2505254
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 22401516 ccggcggtggcaagcagaagaagaag 22401491 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggccgtcgtcgccggcggcg 233 |||||||||||||||||||| Sbjct: 9400315 ggccgtcgtcgccggcggcg 9400296
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 27966001 ccggcggtggcaagcagaagaagaag 27966026 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 aggaggccgtcgtcgccggcggcg 233 |||||| ||||||||||||||||| Sbjct: 20137084 aggaggtcgtcgtcgccggcggcg 20137061 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccgtcgtcgccggcggcggc 235 |||||||||||||||||||| Sbjct: 10207769 ccgtcgtcgccggcggcggc 10207788
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gaggccgtcgtcgccggcggcg 233 |||||||||||||||||||||| Sbjct: 28823987 gaggccgtcgtcgccggcggcg 28823966
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 43493 ccggcggtggcaagcagaagaagaag 43518
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gaggccgtcgtcgccggcggcg 233 |||||||||||||||||||||| Sbjct: 81673 gaggccgtcgtcgccggcggcg 81652
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 ggaggccgtcgtcgccggcggcggca 236 |||||||||| ||||||||||||||| Sbjct: 103888 ggaggccgtcctcgccggcggcggca 103913
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 38005 ccggcggtggcaagcagaagaagaag 37980
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 428 ggcggcgacagggagcgcggcg 449 |||||||||||||||||||||| Sbjct: 40071 ggcggcgacagggagcgcggcg 40092
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654A08 Length = 154812 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 428 ggcggcgacagggagcgcggcg 449 |||||||||||||||||||||| Sbjct: 144969 ggcggcgacagggagcgcggcg 144990
>dbj|AK064745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E04, full insert sequence Length = 852 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 212 gaggccgtcgtcgccggcggcg 233 |||||||||||||||||||||| Sbjct: 303 gaggccgtcgtcgccggcggcg 282
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 ggccgtcgtcgccggcggcggc 235 |||||||||||||||||||||| Sbjct: 2041862 ggccgtcgtcgccggcggcggc 2041841
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaag 250 ||||||| |||||||||||||||||| Sbjct: 2514260 ccggcggaggcaagcagaagaagaag 2514285
>ref|NM_197542.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0040D23.1), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 cctctccctctcggagttcaccacc 286 ||||||||| ||||||||||||||| Sbjct: 852 cctctccctgtcggagttcaccacc 828
>gb|BT017338.1| Zea mays clone EL01N0321D06.c mRNA sequence Length = 620 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 |||| ||||| |||||||||||||||||| Sbjct: 109 ccggaggcgggaagcagaagaagaagaag 137
>gb|AE017356.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 14, complete sequence Length = 762694 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 cccccgctgagcccaagggcctcac 342 ||||||| ||||||||||||||||| Sbjct: 151937 cccccgccgagcccaagggcctcac 151961
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cggcgcgcctcgccgcgccgc 318 ||||||||||||||||||||| Sbjct: 531126 cggcgcgcctcgccgcgccgc 531106
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 ggcggcgacagggagcgcggc 448 ||||||||||||||||||||| Sbjct: 1709359 ggcggcgacagggagcgcggc 1709339
>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic region, partial sequence Length = 161264 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 294 ccgccggcgcgcctcgccgcgccgcccccgctg 326 |||||||| ||||| ||||||||||||||||| Sbjct: 134795 ccgccggcacgcctgcccgcgccgcccccgctg 134763
>ref|NM_001003824.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 2, mRNA Length = 3007 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001003825.2| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 3, mRNA Length = 2992 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006668.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 4, mRNA Length = 2971 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006674.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 6, mRNA Length = 2454 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006669.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 5, mRNA Length = 2899 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006676.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 8, mRNA Length = 1864 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006675.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 7, mRNA Length = 2939 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006678.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 10, mRNA Length = 1274 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006679.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 11, mRNA Length = 1734 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006680.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 12, mRNA Length = 2291 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_001006677.1| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 9, mRNA Length = 2059 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>ref|NM_010611.2| Mus musculus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), transcript variant 1, mRNA Length = 2777 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 87 cgcgccgcccccgctgagccc 107
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 cggcgcgcctcgccgcgccgc 318 ||||||||||||||||||||| Sbjct: 3243952 cggcgcgcctcgccgcgccgc 3243972
>gb|BT013272.1| Lycopersicon esculentum clone 134845F, mRNA sequence Length = 545 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| || |||||||||||||||||| Sbjct: 96 ccggcggtggaaagcagaagaagaagaag 124
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 cgcgcctcgccgcgccgcccccgct 325 ||||||||| ||||||||||||||| Sbjct: 15464696 cgcgcctcgacgcgccgcccccgct 15464672 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ggaggccgtcgtcgccggcggcgg 234 |||||||||||||| ||||||||| Sbjct: 13948216 ggaggccgtcgtcggcggcggcgg 13948239 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgcgcctcgccgcgccgc 318 |||||||||||||||||||| Sbjct: 3085632 ggcgcgcctcgccgcgccgc 3085651
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 cagcagcagcgcgaagccgac 67 ||||||||||||||||||||| Sbjct: 2198169 cagcagcagcgcgaagccgac 2198189
>ref|XM_568572.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide biosynthesis-related protein (CNN00440) partial mRNA Length = 2447 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 318 cccccgctgagcccaagggcctcac 342 ||||||| ||||||||||||||||| Sbjct: 1367 cccccgccgagcccaagggcctcac 1391
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 301 cgcgcctcgccgcgccgcccccgct 325 ||||||||| ||||||||||||||| Sbjct: 36830 cgcgcctcgacgcgccgcccccgct 36854
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 cggcgcgcctcgccgcgccgc 318 ||||||||||||||||||||| Sbjct: 2973775 cggcgcgcctcgccgcgccgc 2973795
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 cctctccctctcggagttcaccacc 286 ||||||||| ||||||||||||||| Sbjct: 87866 cctctccctgtcggagttcaccacc 87842
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 cctctccctctcggagttcaccacc 286 ||||||||| ||||||||||||||| Sbjct: 12512 cctctccctgtcggagttcaccacc 12488
>gb|AE005756.1| Caulobacter crescentus CB15 section 82 of 359 of the complete genome Length = 10951 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 aagccctggggcggcgtcggcgcct 101 ||||||| ||||||||||||||||| Sbjct: 6866 aagcccttgggcggcgtcggcgcct 6890
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 217 cgtcgtcgccggcggcggcaagcag 241 ||||||| ||||||||||||||||| Sbjct: 198846 cgtcgtctccggcggcggcaagcag 198822
>dbj|AK161558.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330409D24 product:potassium voltage-gated channel, subfamily Q, member 2, full insert sequence Length = 5797 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 106 cgcgccgcccccgctgagccc 126
>gb|AF087453.2|AF087453 Rattus norvegicus potassium channel (KCNQ2) mRNA, complete cds Length = 4165 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 76 cgcgccgcccccgctgagccc 96
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 tcgtcgccggcggcggcaagc 239 ||||||||||||||||||||| Sbjct: 181812 tcgtcgccggcggcggcaagc 181792
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaggccgtcgtcgccggcg 230 ||||||||||||||||||||| Sbjct: 5727327 aggaggccgtcgtcgccggcg 5727347 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gccgtcgtcgccggcggcggc 235 ||||||||||||||||||||| Sbjct: 3610422 gccgtcgtcgccggcggcggc 3610442
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 cctctccctctcggagttcaccacc 286 ||||||||| ||||||||||||||| Sbjct: 20372364 cctctccctgtcggagttcaccacc 20372340 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcgccgcgccgcccccgc 324 |||||||||||||||||||| Sbjct: 17721143 cctcgccgcgccgcccccgc 17721124
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 cgcgcctcgccgcgccgcccccgct 325 ||||||||| ||||||||||||||| Sbjct: 15459230 cgcgcctcgacgcgccgcccccgct 15459206 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 ggaggccgtcgtcgccggcggcgg 234 |||||||||||||| ||||||||| Sbjct: 13943191 ggaggccgtcgtcggcggcggcgg 13943214 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgcgcctcgccgcgccgc 318 |||||||||||||||||||| Sbjct: 3085743 ggcgcgcctcgccgcgccgc 3085762
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cggcggcggcaagcagaagaagaag 250 ||||||||||||| ||||||||||| Sbjct: 24567229 cggcggcggcaagaagaagaagaag 24567253 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccgccggcgcgcctcgccg 312 |||||||||||||||||||| Sbjct: 37790573 gccgccggcgcgcctcgccg 37790554 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 gtcgtcgccggcggcggcaa 237 |||||||||||||||||||| Sbjct: 604102 gtcgtcgccggcggcggcaa 604083
>gb|AY553205.1| Rhabdosargus sarba sodium potassium ATPase alpha subunit mRNA, complete cds Length = 3072 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 ggcaagcagaagaagaagaagggca 257 |||||| |||||||||||||||||| Sbjct: 52 ggcaaggagaagaagaagaagggca 76
>gb|AC084556.1|CBRG35F02 Caenorhabditis briggsae cosmid G35F02, complete sequence Length = 41330 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 ggcaagcagaagaagaagaag 253 ||||||||||||||||||||| Sbjct: 38126 ggcaagcagaagaagaagaag 38146
>ref|NM_133322.1| Rattus norvegicus potassium voltage-gated channel, subfamily Q, member 2 (Kcnq2), mRNA Length = 4165 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 76 cgcgccgcccccgctgagccc 96
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 cggcggcggcaagcagaagaagaag 250 ||||||||||||| ||||||||||| Sbjct: 147613 cggcggcggcaagaagaagaagaag 147637
>emb|X76714.1|LERPS25 L.esculentum Mill (cv. Rutgers) mRNA for ribosomal protein S25 Length = 520 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 ||||||| || |||||||||||||||||| Sbjct: 53 ccggcggtggaaagcagaagaagaagaag 81
>dbj|AK110125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-B11, full insert sequence Length = 3706 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 gcaagcagaagaagaagaagggcac 258 ||||| ||||||||||||||||||| Sbjct: 713 gcaagaagaagaagaagaagggcac 737
>gb|AY106520.1| Zea mays PCO097110 mRNA sequence Length = 779 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 |||| ||||| |||||||||||||||||| Sbjct: 200 ccggaggcgggaagcagaagaagaagaag 228
>gb|AY104484.1| Zea mays PCO107854 mRNA sequence Length = 842 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 ggaggccgtcgtcgccggcggcggc 235 |||||||||||||| |||||||||| Sbjct: 181 ggaggccgtcgtcgacggcggcggc 205
>gb|AY105144.1| Zea mays PCO097109 mRNA sequence Length = 682 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 ccggcggcggcaagcagaagaagaagaag 253 |||| ||||| |||||||||||||||||| Sbjct: 190 ccggaggcgggaagcagaagaagaagaag 218
>emb|AL450341.10| Mouse DNA sequence from clone RP23-401L17 on chromosome 2, complete sequence Length = 214573 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 cgcgccgcccccgctgagccc 331 ||||||||||||||||||||| Sbjct: 134276 cgcgccgcccccgctgagccc 134256
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 cggcgcgcctcgccgcgccgc 318 ||||||||||||||||||||| Sbjct: 1898745 cggcgcgcctcgccgcgccgc 1898725
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 262 cctctccctctcggagttcaccacc 286 ||||||||| ||||||||||||||| Sbjct: 20383636 cctctccctgtcggagttcaccacc 20383612 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcgccgcgccgcccccgc 324 |||||||||||||||||||| Sbjct: 17730396 cctcgccgcgccgcccccgc 17730377
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaggccgtcgtcgccggcg 230 ||||||||||||||||||||| Sbjct: 5727320 aggaggccgtcgtcgccggcg 5727340 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 gccgtcgtcgccggcggcggc 235 ||||||||||||||||||||| Sbjct: 3610367 gccgtcgtcgccggcggcggc 3610387
>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159056 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 aggaggccgtcgtcgccggcg 230 ||||||||||||||||||||| Sbjct: 81850 aggaggccgtcgtcgccggcg 81870
>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122128 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 gccgtcgtcgccggcggcggc 235 ||||||||||||||||||||| Sbjct: 79006 gccgtcgtcgccggcggcggc 78986
>gb|AY751581.1| Phytophthora sojae putative nuclear LIM interactor-interacting protein (NIF6) gene, complete cds Length = 1186 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agcagaagaagaagaagggc 256 |||||||||||||||||||| Sbjct: 1077 agcagaagaagaagaagggc 1096
>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete sequence; frRUNX3 (frRUNX3) gene, complete cds; and frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes, complete sequence Length = 271832 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ggcggcaagcagaagaagaagaag 253 ||||||||| |||||||||||||| Sbjct: 141755 ggcggcaagaagaagaagaagaag 141732
>ref|NM_183534.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gtcgtcgccggcggcggcaa 237 |||||||||||||||||||| Sbjct: 542 gtcgtcgccggcggcggcaa 561
>ref|XM_506934.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0060O16.24 mRNA Length = 845 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cggcaagcagaagaagaagaaggg 255 ||||||| |||||||||||||||| Sbjct: 37 cggcaagaagaagaagaagaaggg 14
>ref|XM_464430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 848 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 ggcggcggcaagcagaagaagaagaagg 254 |||||||||||| || |||||||||||| Sbjct: 478 ggcggcggcaagaagcagaagaagaagg 505
>ref|XM_450512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggccgtcgtcgccggcggcg 233 |||||||||||||||||||| Sbjct: 939 ggccgtcgtcgccggcggcg 958
>ref|NM_197051.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0012L23.48), mRNA Length = 2115 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cctcgccgcgccgcccccgc 324 |||||||||||||||||||| Sbjct: 84 cctcgccgcgccgcccccgc 103
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cagcagcagcgcgaagccga 66 |||||||||||||||||||| Sbjct: 916084 cagcagcagcgcgaagccga 916103
>ref|NM_190803.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1647 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccgccggcgcgcctcgccg 312 |||||||||||||||||||| Sbjct: 1458 gccgccggcgcgcctcgccg 1439
>ref|NM_021738.1| Homo sapiens supervillin (SVIL), transcript variant 2, mRNA Length = 8300 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagcagaagaagaagaaggg 255 |||||||||||||||||||| Sbjct: 2030 aagcagaagaagaagaaggg 2049
>gb|DQ205320.1| Coix lacryma-jobi clone GBssrJT149 microsatellite sequence Length = 427 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 ggcggcggcaagcagaagaa 246 |||||||||||||||||||| Sbjct: 101 ggcggcggcaagcagaagaa 120
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gatctcgccagcagcagcgc 58 |||||||||||||||||||| Sbjct: 369118 gatctcgccagcagcagcgc 369099
>gb|AY619292.1| Daphnia pulicaria clone WFms0000283 microsatellite marker Dp274 sequence Length = 182 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 240 agaagaagaagaagggcaccaccc 263 |||||||||||||| ||||||||| Sbjct: 136 agaagaagaagaagcgcaccaccc 113
>gb|AF228660.5| Homo sapiens chromosome 8 clone RP11-37N22 map q24.13, complete sequence Length = 182016 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ccatgggcaagccctggggc 88 |||||||||||||||||||| Sbjct: 138236 ccatgggcaagccctggggc 138255
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 cggcggcaagcagaagaagaagaa 252 ||||||||||||| |||||||||| Sbjct: 3152319 cggcggcaagcaggagaagaagaa 3152296
>ref|XM_743928.1| Aspergillus fumigatus Af293 C6 transcription factor (Afu7g04890) partial mRNA Length = 2112 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 cttccccagcctcaaggagg 215 |||||||||||||||||||| Sbjct: 484 cttccccagcctcaaggagg 465
>ref|XM_388535.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08359.1) partial mRNA Length = 537 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 cggcggcggcaagcagaagaagaa 249 ||||||||||||| |||||||||| Sbjct: 495 cggcggcggcaagaagaagaagaa 518
>gb|AC106820.4| Homo sapiens chromosome 16 clone RP11-715J22, complete sequence Length = 176552 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 cgctcctgagcaccgacccaaccc 36 ||||||||||||||||||| |||| Sbjct: 17896 cgctcctgagcaccgaccccaccc 17919
>ref|XM_803664.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510269.50) partial mRNA Length = 1059 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gcaagcagaagaagaagaag 253 |||||||||||||||||||| Sbjct: 294 gcaagcagaagaagaagaag 313
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 gtcgtcgccggcggcggcaagcag 241 |||||||||||| ||||||||||| Sbjct: 255960 gtcgtcgccggctgcggcaagcag 255983
>gb|AC135907.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1057D12, from chromosome 3, complete sequence Length = 161676 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 ggaggccgtcgtcgccggcggcgg 234 |||||||||||||| ||||||||| Sbjct: 63266 ggaggccgtcgtcggcggcggcgg 63243
>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 agaagaagaagaagggcacc 259 |||||||||||||||||||| Sbjct: 42870 agaagaagaagaagggcacc 42889
>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence Length = 249008 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 ggcaagcagaagaagaagaa 252 |||||||||||||||||||| Sbjct: 91858 ggcaagcagaagaagaagaa 91839
>emb|AL606510.10| Human DNA sequence from clone RP11-435D11 on chromosome 10, complete sequence Length = 99961 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccctctccctctcggagttcacca 284 |||||||||||| ||||||||||| Sbjct: 92193 ccctctccctctgggagttcacca 92170
>emb|AL160060.11| Human DNA sequence from clone RP11-207K8 on chromosome 10 Contains part of the SVIL gene for supervillin (archvillin), complete sequence Length = 171800 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 aagcagaagaagaagaaggg 255 |||||||||||||||||||| Sbjct: 18893 aagcagaagaagaagaaggg 18874
>ref|XM_775916.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 5 (sodium/glucose cotransporter), member 12 (LOC575520), mRNA Length = 366 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cggcggcggcaagcagaaga 245 |||||||||||||||||||| Sbjct: 102 cggcggcggcaagcagaaga 121
>ref|XM_775854.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 5 (sodium/glucose cotransporter), member 12 (LOC575453), mRNA Length = 357 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cggcggcggcaagcagaaga 245 |||||||||||||||||||| Sbjct: 102 cggcggcggcaagcagaaga 121
>ref|XM_968327.1| PREDICTED: Tribolium castaneum similar to CG10206-PA (LOC662214), mRNA Length = 1766 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 caagcagaagaagaagaagg 254 |||||||||||||||||||| Sbjct: 1481 caagcagaagaagaagaagg 1500
>gb|AY992866.1| Uncultured bacterium clone C22_g04 16S ribosomal RNA gene, partial sequence Length = 1370 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gtcgccggcggcggcaagca 240 |||||||||||||||||||| Sbjct: 74 gtcgccggcggcggcaagca 55
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgcgcctcgccgcgccgc 318 |||||||||||||||||||| Sbjct: 8645 ggcgcgcctcgccgcgccgc 8664
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 49 gcagcagcgcgaagccgacgccatgggc 76 ||||||||||||| ||||||||||||| Sbjct: 4795905 gcagcagcgcgaatacgacgccatgggc 4795932
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ccgccggcgcgcctcgccgcgccg 317 ||||||||||||| |||||||||| Sbjct: 218425 ccgccggcgcgccgcgccgcgccg 218402
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cgccagcagcagcgcgaagccgac 67 ||||||||||||||||| |||||| Sbjct: 149020 cgccagcagcagcgcgatgccgac 149043
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ggcggcaagcagaagaagaagaag 253 ||||| |||||||||||||||||| Sbjct: 47188 ggcgggaagcagaagaagaagaag 47211
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aggccgtcgtcgccggcggc 232 |||||||||||||||||||| Sbjct: 1220841 aggccgtcgtcgccggcggc 1220860
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 cctcgccgcgccgcccccgc 324 |||||||||||||||||||| Sbjct: 76263 cctcgccgcgccgcccccgc 76244
>dbj|AK222450.1| Ciona intestinalis mRNA for zinc finger protein, complete cds, clone: cicl018d05 Length = 1121 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gcaagcagaagaagaagaag 253 |||||||||||||||||||| Sbjct: 461 gcaagcagaagaagaagaag 480
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gcagcagcgcgaagccgacg 68 |||||||||||||||||||| Sbjct: 900966 gcagcagcgcgaagccgacg 900985
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gccgtcgtcgccggcggcgg 234 |||||||||||||||||||| Sbjct: 1563515 gccgtcgtcgccggcggcgg 1563534
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ggcgcgcctcgccgcgccgc 318 |||||||||||||||||||| Sbjct: 10629 ggcgcgcctcgccgcgccgc 10610
>gb|AE012510.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 418 of 460 of the complete genome Length = 10648 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccagcagcagcgcgaagccg 65 |||||||||||||||||||| Sbjct: 4191 ccagcagcagcgcgaagccg 4210
>gb|AC090921.7| Homo sapiens chromosome 8, clone RP11-37N22, complete sequence Length = 182041 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ccatgggcaagccctggggc 88 |||||||||||||||||||| Sbjct: 43782 ccatgggcaagccctggggc 43763
>dbj|AK159063.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530047L18 product:unclassifiable, full insert sequence Length = 2525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gcaagcagaagaagaagaag 253 |||||||||||||||||||| Sbjct: 2245 gcaagcagaagaagaagaag 2264
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ccagcagcagcgcgaagccg 65 |||||||||||||||||||| Sbjct: 4696726 ccagcagcagcgcgaagccg 4696745
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gtcgccggcggcggcaagca 240 |||||||||||||||||||| Sbjct: 2633639 gtcgccggcggcggcaagca 2633620 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gccgtcgtcgccggcggcgg 234 |||||||||||||||||||| Sbjct: 1816932 gccgtcgtcgccggcggcgg 1816951
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cggcaagcagaagaagaagaaggg 255 ||||||| |||||||||||||||| Sbjct: 78675 cggcaagaagaagaagaagaaggg 78652
>gb|AC090003.1|CBRG45N09 Caenorhabditis briggsae cosmid G45N09, complete sequence Length = 47452 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagcagaagaagaagaagg 254 |||||||||||||||||||| Sbjct: 41705 caagcagaagaagaagaagg 41686
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cagcagcagcgcgaagccga 66 |||||||||||||||||||| Sbjct: 2871884 cagcagcagcgcgaagccga 2871865 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 agaagaagggcaccaccctc 265 |||||||||||||||||||| Sbjct: 599300 agaagaagggcaccaccctc 599281
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 296 gccggcgcgcctcgccgcgccgcccccg 323 |||||||||| |||||||||||||||| Sbjct: 1381456 gccggcgcgcgccgccgcgccgcccccg 1381429
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccgccggcgcgcctcgccg 312 |||||||||||||||||||| Sbjct: 11929 gccgccggcgcgcctcgccg 11910
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccgccggcgcgcctcgccg 312 |||||||||||||||||||| Sbjct: 118874 gccgccggcgcgcctcgccg 118855
>gb|AC093525.3| Homo sapiens chromosome 16 clone RP11-20I23, complete sequence Length = 157518 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 cgctcctgagcaccgacccaaccc 36 ||||||||||||||||||| |||| Sbjct: 107169 cgctcctgagcaccgaccccaccc 107192
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08 Length = 126263 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ccgtcgtcgccggcggcggc 235 |||||||||||||||||||| Sbjct: 13792 ccgtcgtcgccggcggcggc 13811
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 ccagcagcagcgcgaagccg 65 |||||||||||||||||||| Sbjct: 429588 ccagcagcagcgcgaagccg 429569
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 gtcgtcgccggcggcggcaa 237 |||||||||||||||||||| Sbjct: 78707 gtcgtcgccggcggcggcaa 78688
>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0024J13 Length = 127614 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggccgtcgtcgccggcggcg 233 |||||||||||||||||||| Sbjct: 83729 ggccgtcgtcgccggcggcg 83710
>gb|AE004991.1| Halobacterium sp. NRC-1 section 22 of 170 of the complete genome Length = 10586 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 gtcgtcgccggcggcggcaa 237 |||||||||||||||||||| Sbjct: 10307 gtcgtcgccggcggcggcaa 10288
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 227 ggcggcggcaagcagaagaagaagaagg 254 |||||||||||| || |||||||||||| Sbjct: 77356 ggcggcggcaagaagcagaagaagaagg 77329
>emb|AL928622.9| Zebrafish DNA sequence from clone DKEY-31O13, complete sequence Length = 230557 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gcaagcagaagaagaagaag 253 |||||||||||||||||||| Sbjct: 11287 gcaagcagaagaagaagaag 11306
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 aggaggccgtcgtcgccggcggcg 233 |||||| ||||||||||||||||| Sbjct: 2870 aggaggtcgtcgtcgccggcggcg 2847
>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1188_F05 Length = 117045 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 aggaggccgtcgtcgccggcggcg 233 |||||| ||||||||||||||||| Sbjct: 83630 aggaggtcgtcgtcgccggcggcg 83607
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 cggcaagcagaagaagaagaaggg 255 ||||||| |||||||||||||||| Sbjct: 81301 cggcaagaagaagaagaagaaggg 81324
>dbj|AK109089.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A01, full insert sequence Length = 848 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 227 ggcggcggcaagcagaagaagaagaagg 254 |||||||||||| || |||||||||||| Sbjct: 478 ggcggcggcaagaagcagaagaagaagg 505
>dbj|AK108587.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-B03, full insert sequence Length = 1475 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 gtcgtcgccggcggcggcaa 237 |||||||||||||||||||| Sbjct: 542 gtcgtcgccggcggcggcaa 561
>dbj|AK103248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123K24, full insert sequence Length = 1876 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccgccggcgcgcctcgccg 312 |||||||||||||||||||| Sbjct: 1449 gccgccggcgcgcctcgccg 1430
>dbj|AK071332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089P20, full insert sequence Length = 2530 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cctcgccgcgccgcccccgc 324 |||||||||||||||||||| Sbjct: 189 cctcgccgcgccgcccccgc 208
>dbj|AK070248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041O06, full insert sequence Length = 2761 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgcgcctcgccgcgccgc 318 |||||||||||||||||||| Sbjct: 124 ggcgcgcctcgccgcgccgc 143
>dbj|AK067375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104L22, full insert sequence Length = 2584 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 ggcgcgcctcgccgcgccgc 318 |||||||||||||||||||| Sbjct: 63 ggcgcgcctcgccgcgccgc 82
>dbj|AK064357.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B05, full insert sequence Length = 845 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 cggcaagcagaagaagaagaaggg 255 ||||||| |||||||||||||||| Sbjct: 37 cggcaagaagaagaagaagaaggg 14
>gb|AF109135.1|AF109135 Homo sapiens archvillin (SVIL) mRNA, complete cds Length = 7586 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 aagcagaagaagaagaaggg 255 |||||||||||||||||||| Sbjct: 2030 aagcagaagaagaagaaggg 2049
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cagcagcagcgcgaagccga 66 |||||||||||||||||||| Sbjct: 3467853 cagcagcagcgcgaagccga 3467834
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 ggcggcaagcagaagaagaagaag 253 ||||| |||||||||||||||||| Sbjct: 80879 ggcgggaagcagaagaagaagaag 80902
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 tcgccagcagcagcgcgaag 62 |||||||||||||||||||| Sbjct: 705303 tcgccagcagcagcgcgaag 705322
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 caagcagaagaagaagaagg 254 |||||||||||||||||||| Sbjct: 164546 caagcagaagaagaagaagg 164527
>emb|AL645740.6| Mouse DNA sequence from clone RP23-411H13 on chromosome 4, complete sequence Length = 172665 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gcaagcagaagaagaagaag 253 |||||||||||||||||||| Sbjct: 45883 gcaagcagaagaagaagaag 45864
>dbj|AB070945.1| Streptomyces avermitilis polyketide-5 biosynthetic gene cluster Length = 25150 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 cagcagcagcgcgaagccga 66 |||||||||||||||||||| Sbjct: 22530 cagcagcagcgcgaagccga 22549
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccgccggcgcgcctcgccg 312 |||||||||||||||||||| Sbjct: 49821 gccgccggcgcgcctcgccg 49802 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,555,143 Number of Sequences: 3902068 Number of extensions: 4555143 Number of successful extensions: 670711 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 186 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 659087 Number of HSP's gapped (non-prelim): 11544 length of query: 449 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 427 effective length of database: 17,147,199,772 effective search space: 7321854302644 effective search space used: 7321854302644 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
