Clone Name | bart60f09 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK121020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049E21, full insert sequence Length = 1265 Score = 426 bits (215), Expect = e-116 Identities = 357/400 (89%), Gaps = 7/400 (1%) Strand = Plus / Plus Query: 35 cctcctcctcggcggccgcct--ccccgcagcccctcccccaa---gccgccgccgccat 89 ||||||| ||||||||||||| |||| | ||||| |||||| |||||||||||||| Sbjct: 71 cctcctcttcggcggccgcctcccccctcccccccttccccaagccgccgccgccgccat 130 Query: 90 ggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgctcac 149 ||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||| Sbjct: 131 ggccatgaagggacccggcctcttctccgacattggcaagagggccaaggatctgctcac 190 Query: 150 cagggactacacctacgaccagaagctctccgtctccaccgtcagctcctccggagtggc 209 || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 191 caaggactacacctatgaccagaagctgaccgtctccaccgtcagctcctccggagtggg 250 Query: 210 cgtcacttccacagctgtgaagaaaggagggctttattctcttgatgt-agcttcagctt 268 | ||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| || Sbjct: 251 cctcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagc-tcagttt 309 Query: 269 acaagtataagaatactcttgttgatgtcaaagtggatacagaatcaaatatctctacta 328 ||||||| |||| |||||| || |||||||||||||| |||||||| ||||||||||||| Sbjct: 310 acaagtacaagagtactctcgtcgatgtcaaagtggacacagaatctaatatctctacta 369 Query: 329 cattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtcaagtttcctg 388 | |||||||| || |||||||| |||||||||||||||||||| ||||||| | |||| Sbjct: 370 ctttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtcaagctgcctg 429 Query: 389 attacaatgctggaaaggtggaggtgcaatacttccatga 428 | |||||| |||||||||||||| |||||||||||||||| Sbjct: 430 actacaattctggaaaggtggagatgcaatacttccatga 469
>gb|AY823551.1| Pennisetum glaucum voltage dependent anion channel protein mRNA, complete cds Length = 1025 Score = 422 bits (213), Expect = e-115 Identities = 309/341 (90%) Strand = Plus / Plus Query: 88 atggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgctc 147 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 atggccatgaagggacccggcctcttctccgacatcggcaagaaggccaaggatctgctc 60 Query: 148 accagggactacacctacgaccagaagctctccgtctccaccgtcagctcctccggagtg 207 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 acgagggactacacctacgaccagaagctgaccgtctccaccgtcagctcctccggagtg 120 Query: 208 gccgtcacttccacagctgtgaagaaaggagggctttattctcttgatgtagcttcagct 267 | | ||||||||||||||||||||||||||||||||||| |||||||||| ||||| | Sbjct: 121 ggcctcacttccacagctgtgaagaaaggagggctttatactcttgatgtcagttcagtt 180 Query: 268 tacaagtataagaatactcttgttgatgtcaaagtggatacagaatcaaatatctctact 327 |||||||| ||||||||| |||||||| | |||||||| || |||||||| ||||||||| Sbjct: 181 tacaagtacaagaatactgttgttgatattaaagtggacacggaatcaaacatctctact 240 Query: 328 acattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtcaagtttcct 387 || |||||||| ||||||| ||||||||||||||||||||||||||| || ||| | ||| Sbjct: 241 accttgactgtgttggatgccctgccatccacaaagcttgtgacgtcggtgaagctgcct 300 Query: 388 gattacaatgctggaaaggtggaggtgcaatacttccatga 428 || |||||| ||||||||||||| | || ||||||||||| Sbjct: 301 gactacaattctggaaaggtggaacttcattacttccatga 341
>gb|AF513381.1| Pennisetum glaucum PgPOR29 (PORIN) mRNA, complete cds; nuclear gene for mitochondrial product Length = 831 Score = 422 bits (213), Expect = e-115 Identities = 309/341 (90%) Strand = Plus / Plus Query: 88 atggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgctc 147 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 atggccatgaagggacccggcctcttctccgacatcggcaagaaggccaaggatctgctc 60 Query: 148 accagggactacacctacgaccagaagctctccgtctccaccgtcagctcctccggagtg 207 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 acgagggactacacctacgaccagaagctgaccgtctccaccgtcagctcctccggagtg 120 Query: 208 gccgtcacttccacagctgtgaagaaaggagggctttattctcttgatgtagcttcagct 267 | | ||||||||||||||||||||||||||||||||||| |||||||||| ||||| | Sbjct: 121 ggcctcacttccacagctgtgaagaaaggagggctttatactcttgatgtcagttcagtt 180 Query: 268 tacaagtataagaatactcttgttgatgtcaaagtggatacagaatcaaatatctctact 327 |||||||| ||||||||| |||||||| | |||||||| || |||||||| ||||||||| Sbjct: 181 tacaagtacaagaatactgttgttgatattaaagtggacacggaatcaaacatctctact 240 Query: 328 acattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtcaagtttcct 387 || |||||||| ||||||| ||||||||||||||||||||||||||| || ||| | ||| Sbjct: 241 accttgactgtgttggatgccctgccatccacaaagcttgtgacgtcggtgaagctgcct 300 Query: 388 gattacaatgctggaaaggtggaggtgcaatacttccatga 428 || |||||| ||||||||||||| | || ||||||||||| Sbjct: 301 gactacaattctggaaaggtggaacttcattacttccatga 341
>gb|AY224468.1| Oryza sativa (japonica cultivar-group) isolate 24162 porin-like protein mRNA, complete cds Length = 834 Score = 400 bits (202), Expect = e-108 Identities = 309/342 (90%), Gaps = 2/342 (0%) Strand = Plus / Plus Query: 88 atggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgctc 147 ||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||| Sbjct: 1 atggccatgaagggacccggcctcttctccgacattggcaagagggccaaggatctgctc 60 Query: 148 accagggactacacctacgaccagaagctctccgtctccaccgtcagctcctccggagtg 207 |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 accaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcctccggagtg 120 Query: 208 gccgtcacttccacagctgtgaagaaaggagggctttattctcttgatgt-agcttcagc 266 | | ||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| Sbjct: 121 ggcctcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagc-tcagt 179 Query: 267 ttacaagtataagaatactcttgttgatgtcaaagtggatacagaatcaaatatctctac 326 ||||||||| |||| |||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 180 ttacaagtacaagagtactctcgtcgatgtcaaagtggacacagaatctaatatctctac 239 Query: 327 tacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtcaagtttcc 386 ||| |||||||| || |||||||| |||||||||||||||||||| ||||||| | || Sbjct: 240 tactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtcaagctgcc 299 Query: 387 tgattacaatgctggaaaggtggaggtgcaatacttccatga 428 ||| |||||| |||||||||||||| |||||||||||||||| Sbjct: 300 tgactacaattctggaaaggtggagatgcaatacttccatga 341
>gb|AY105200.1| Zea mays PCO141157 mRNA sequence Length = 1411 Score = 333 bits (168), Expect = 3e-88 Identities = 308/354 (87%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 75 agccgccgccgccatggccatgaagggaccgggcctcttcaccgacatcggcaagaaggc 134 ||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 232 agccgccgccgcc---gccatgaagggacccggcctcttctccgacatcggcaagaaggc 288 Query: 135 caaggatctgctcaccagggactacacctacgaccagaagctctccgtctccaccgtcag 194 ||||||||| |||| | ||||||||| |||||||||||||| || ||||||||| ||| Sbjct: 289 caaggatctactcagtaaggactacacttacgaccagaagctgaccatctccaccgccag 348 Query: 195 ctcctccggagtggccgtcacttccacagctgtgaagaaaggagggctttattctcttga 254 | |||| ||| ||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 cgcctctggactgggcctgacttccacagctgtgaagaaaggagggctttattctcttga 408 Query: 255 tgtagcttcagcttacaagtataagaatactcttgttgatgtcaaagtggatacagaatc 314 ||| ||||| ||||||||| |||||||| ||||||||| |||||||| || ||||| Sbjct: 409 tgtcagttcagtttacaagtacaagaataccactgttgatgttaaagtggacactgaatc 468 Query: 315 aaatatctctactacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtc 374 ||||||||||||||||||||| || ||||| | | |||||| |||||||||||| || || Sbjct: 469 aaatatctctactacattgaccgtgttggacgccttgccatgcacaaagcttgtcacttc 528 Query: 375 tgtcaagtttcctgattacaatgctggaaaggtggaggtgcaatacttccatga 428 ||| ||| | ||||| |||||| ||||||||||||| |||||||||||||||| Sbjct: 529 tgtgaagctgcctgactacaattatggaaaggtggagctgcaatacttccatga 582
>gb|AY823552.1| Pennisetum glaucum voltage dependent anion channel protein gene, complete cds Length = 2967 Score = 123 bits (62), Expect = 5e-25 Identities = 95/106 (89%) Strand = Plus / Plus Query: 212 tcacttccacagctgtgaagaaaggagggctttattctcttgatgtagcttcagcttaca 271 ||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 1996 tcacttccacagctgtgaagaaaggagggctttatactcttgatgtcagttcagtttaca 2055 Query: 272 agtataagaatactcttgttgatgtcaaagtggatacagaatcaaa 317 |||| ||||||||| |||||||| | |||||||| || |||||||| Sbjct: 2056 agtacaagaatactgttgttgatattaaagtggacacggaatcaaa 2101 Score = 115 bits (58), Expect = 1e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 139 gatctgctcaccagggactacacctacgaccagaagctctccgtctccaccgtcagctcc 198 ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 145 gatctgctcacgagggactacacctacgaccagaagctgaccgtctccaccgtcagctcc 204 Query: 199 tccggagtgg 208 |||||||||| Sbjct: 205 tccggagtgg 214 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 319 atctctactacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtc 378 ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| || Sbjct: 2195 atctctactaccttgactgtgttggatgccctgccatccacaaagcttgtgacgtcggtg 2254 Query: 379 aagtttcctgattacaatgctggaaaggt 407 ||| | ||||| |||||| |||||||||| Sbjct: 2255 aagctgcctgactacaattctggaaaggt 2283 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 88 atggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaagg 139 ||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1 atggccatgaagggacccggcctcttctccgacatcggcaagaaggccaagg 52
>gb|AY104040.1| Zea mays PCO141155 mRNA sequence Length = 973 Score = 115 bits (58), Expect = 1e-22 Identities = 103/117 (88%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 91 gccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgctcacc 150 |||||||||||||| ||||||||| |||||||||||| ||||| |||||||| |||| Sbjct: 157 gccatgaagggacccggcctcttctccgacatcggcaggaagg--aaggatctactcatt 214 Query: 151 agggactacacctacgaccagaagctctccgtctccaccgtcagctcctccggagtg 207 | |||||||||||||||||||||||| ||| ||||||||| |||| |||| |||||| Sbjct: 215 aaggactacacctacgaccagaagctgtccatctccaccgccagcgcctctggagtg 271
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 111 bits (56), Expect = 2e-21 Identities = 94/104 (90%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 212 tcacttccacagctgtgaagaaaggagggctttattctcttgatgt-agcttcagcttac 270 ||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||| Sbjct: 5317836 tcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagc-tcagtttac 5317778 Query: 271 aagtataagaatactcttgttgatgtcaaagtggatacagaatc 314 ||||| |||| |||||| || |||||||||||||| |||||||| Sbjct: 5317777 aagtacaagagtactctcgtcgatgtcaaagtggacacagaatc 5317734 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 139 gatctgctcaccagggactacacctacgaccagaagctctccgtctccaccgtcagctcc 198 ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 5319935 gatctgctcaccaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcc 5319876 Query: 199 tccggagtgg 208 |||||||||| Sbjct: 5319875 tccggagtgg 5319866 Score = 97.6 bits (49), Expect = 3e-17 Identities = 96/110 (87%), Gaps = 5/110 (4%) Strand = Plus / Minus Query: 35 cctcctcctcggcggccgcct--ccccgcagcccctcccccaa---gccgccgccgccat 89 ||||||| ||||||||||||| |||| | ||||| |||||| |||||||||||||| Sbjct: 5320163 cctcctcttcggcggccgcctcccccctcccccccttccccaagccgccgccgccgccat 5320104 Query: 90 ggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaagg 139 ||||||||||||||| ||||||||| ||||||| ||||||| |||||||| Sbjct: 5320103 ggccatgaagggacccggcctcttctccgacattggcaagagggccaagg 5320054 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 319 atctctactacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtc 378 ||||||||||| |||||||| || |||||||| |||||||||||||||||||| |||| Sbjct: 5317644 atctctactactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtc 5317585 Query: 379 aagtttcctgattacaatgctggaaaggt 407 ||| | ||||| |||||| |||||||||| Sbjct: 5317584 aagctgcctgactacaattctggaaaggt 5317556 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 aggtggaggtgcaatacttccatga 428 |||||||| |||||||||||||||| Sbjct: 5317492 aggtggagatgcaatacttccatga 5317468 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 30756539 gccgccgccgccatggccat 30756558 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccg 60 |||||||||||| |||||||||||||| Sbjct: 549032 ctcctcctcctcttcggccgcctccccg 549005
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 111 bits (56), Expect = 2e-21 Identities = 94/104 (90%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 212 tcacttccacagctgtgaagaaaggagggctttattctcttgatgt-agcttcagcttac 270 ||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||| Sbjct: 24004 tcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagc-tcagtttac 23946 Query: 271 aagtataagaatactcttgttgatgtcaaagtggatacagaatc 314 ||||| |||| |||||| || |||||||||||||| |||||||| Sbjct: 23945 aagtacaagagtactctcgtcgatgtcaaagtggacacagaatc 23902 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 139 gatctgctcaccagggactacacctacgaccagaagctctccgtctccaccgtcagctcc 198 ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 26103 gatctgctcaccaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcc 26044 Query: 199 tccggagtgg 208 |||||||||| Sbjct: 26043 tccggagtgg 26034 Score = 97.6 bits (49), Expect = 3e-17 Identities = 96/110 (87%), Gaps = 5/110 (4%) Strand = Plus / Minus Query: 35 cctcctcctcggcggccgcct--ccccgcagcccctcccccaa---gccgccgccgccat 89 ||||||| ||||||||||||| |||| | ||||| |||||| |||||||||||||| Sbjct: 26331 cctcctcttcggcggccgcctcccccctcccccccttccccaagccgccgccgccgccat 26272 Query: 90 ggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaagg 139 ||||||||||||||| ||||||||| ||||||| ||||||| |||||||| Sbjct: 26271 ggccatgaagggacccggcctcttctccgacattggcaagagggccaagg 26222 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 319 atctctactacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtc 378 ||||||||||| |||||||| || |||||||| |||||||||||||||||||| |||| Sbjct: 23812 atctctactactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtc 23753 Query: 379 aagtttcctgattacaatgctggaaaggt 407 ||| | ||||| |||||| |||||||||| Sbjct: 23752 aagctgcctgactacaattctggaaaggt 23724 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 aggtggaggtgcaatacttccatga 428 |||||||| |||||||||||||||| Sbjct: 23660 aggtggagatgcaatacttccatga 23636
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 111 bits (56), Expect = 2e-21 Identities = 94/104 (90%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 212 tcacttccacagctgtgaagaaaggagggctttattctcttgatgt-agcttcagcttac 270 ||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||| Sbjct: 5317051 tcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagc-tcagtttac 5316993 Query: 271 aagtataagaatactcttgttgatgtcaaagtggatacagaatc 314 ||||| |||| |||||| || |||||||||||||| |||||||| Sbjct: 5316992 aagtacaagagtactctcgtcgatgtcaaagtggacacagaatc 5316949 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 139 gatctgctcaccagggactacacctacgaccagaagctctccgtctccaccgtcagctcc 198 ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 5319150 gatctgctcaccaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcc 5319091 Query: 199 tccggagtgg 208 |||||||||| Sbjct: 5319090 tccggagtgg 5319081 Score = 97.6 bits (49), Expect = 3e-17 Identities = 96/110 (87%), Gaps = 5/110 (4%) Strand = Plus / Minus Query: 35 cctcctcctcggcggccgcct--ccccgcagcccctcccccaa---gccgccgccgccat 89 ||||||| ||||||||||||| |||| | ||||| |||||| |||||||||||||| Sbjct: 5319378 cctcctcttcggcggccgcctcccccctcccccccttccccaagccgccgccgccgccat 5319319 Query: 90 ggccatgaagggaccgggcctcttcaccgacatcggcaagaaggccaagg 139 ||||||||||||||| ||||||||| ||||||| ||||||| |||||||| Sbjct: 5319318 ggccatgaagggacccggcctcttctccgacattggcaagagggccaagg 5319269 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 319 atctctactacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtc 378 ||||||||||| |||||||| || |||||||| |||||||||||||||||||| |||| Sbjct: 5316859 atctctactactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtc 5316800 Query: 379 aagtttcctgattacaatgctggaaaggt 407 ||| | ||||| |||||| |||||||||| Sbjct: 5316799 aagctgcctgactacaattctggaaaggt 5316771 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 aggtggaggtgcaatacttccatga 428 |||||||| |||||||||||||||| Sbjct: 5316707 aggtggagatgcaatacttccatga 5316683 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 30847962 gccgccgccgccatggccat 30847981 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccg 60 |||||||||||| |||||||||||||| Sbjct: 549030 ctcctcctcctcttcggccgcctccccg 549003
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 111 bits (56), Expect = 2e-21 Identities = 94/104 (90%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 212 tcacttccacagctgtgaagaaaggagggctttattctcttgatgt-agcttcagcttac 270 ||||||||||||||||||||||||| ||||||||| |||||||||| ||| |||| |||| Sbjct: 38985 tcacttccacagctgtgaagaaaggggggctttatactcttgatgtcagc-tcagtttac 38927 Query: 271 aagtataagaatactcttgttgatgtcaaagtggatacagaatc 314 ||||| |||| |||||| || |||||||||||||| |||||||| Sbjct: 38926 aagtacaagagtactctcgtcgatgtcaaagtggacacagaatc 38883 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 139 gatctgctcaccagggactacacctacgaccagaagctctccgtctccaccgtcagctcc 198 ||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 41021 gatctgctcaccaaggactacacctatgaccagaagctgaccgtctccaccgtcagctcc 40962 Query: 199 tccggagtgg 208 |||||||||| Sbjct: 40961 tccggagtgg 40952 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccatgaagggaccgggcctcttcaccgacatcggcaagaaggcc 135 ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| |||| Sbjct: 41203 gccgccgccgccatggccatgaagggacccggcctcttctccgacattggcaagagggcc 41144 Query: 136 aagg 139 |||| Sbjct: 41143 aagg 41140 Score = 89.7 bits (45), Expect = 8e-15 Identities = 78/89 (87%) Strand = Plus / Minus Query: 319 atctctactacattgactgtcttggatgtcctgccatccacaaagcttgtgacgtctgtc 378 ||||||||||| |||||||| || |||||||| |||||||||||||||||||| |||| Sbjct: 38793 atctctactactttgactgtgtttgatgtccttccatccacaaagcttgtgacaagtgtc 38734 Query: 379 aagtttcctgattacaatgctggaaaggt 407 ||| | ||||| |||||| |||||||||| Sbjct: 38733 aagctgcctgactacaattctggaaaggt 38705 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/55 (87%), Gaps = 2/55 (3%) Strand = Plus / Minus Query: 35 cctcctcctcggcggccgcct--ccccgcagcccctcccccaagccgccgccgcc 87 ||||||| ||||||||||||| |||| | ||||| |||||||||||||||||| Sbjct: 41261 cctcctcttcggcggccgcctcccccctcccccccttccccaagccgccgccgcc 41207 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 404 aggtggaggtgcaatacttccatga 428 |||||||| |||||||||||||||| Sbjct: 38641 aggtggagatgcaatacttccatga 38617
>emb|X82148.1|TAVDAC3 T.aestivum VDAC3 mRNA for voltage dependent anion channel Length = 1208 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 103 ccgggcctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 |||||||||| ||||||||||||||||||| ||| ||||||||| |||||||||| Sbjct: 85 ccgggcctctacaccgacatcggcaagaagaccagagatctgctctacagggactac 141
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 119 acatcggcaagaaggccaaggatctgctcaccagggactacacc 162 |||||||||||||||||| ||||| |||| ||||||||||||| Sbjct: 17 acatcggcaagaaggccagagatctcctcaacagggactacacc 60
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 100 ggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||| ||||||| |||||| |||||||||||| ||| ||||||||| Sbjct: 159 ggaccaggcctctacaccgagatcggcaagaagaccagggatctgct 205
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 100 ggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||| ||||||| |||||| |||||||||||| ||| ||||||||| Sbjct: 154 ggaccaggcctctacaccgagatcggcaagaagaccagggatctgct 200
>gb|AF093538.1|AF093538 Zea mays voltage-dependent anion-selective channel protein mRNA, partial cds Length = 321 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 100 ggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||| ||||||| |||||| |||||||||||| ||| ||||||||| Sbjct: 7 ggaccaggcctctacaccgagatcggcaagaagaccagggatctgct 53
>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence Length = 1209 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 106 ggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||||| |||||| |||||||||||| ||| ||||||||| Sbjct: 1088 ggcctctacaccgagatcggcaagaagaccagggatctgct 1048
>gb|AY316740.1| Lotus corniculatus var. japonicus VDAC2.1 mRNA, complete cds Length = 1108 Score = 50.1 bits (25), Expect = 0.007 Identities = 115/145 (79%) Strand = Plus / Plus Query: 100 ggaccgggcctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 ||||| || |||||| |||| ||||||||||| ||| ||||| | |||| ||||||| Sbjct: 20 ggaccaggtctcttctccgatatcggcaagaaacccagagatcttttgaccaaggactac 79 Query: 160 acctacgaccagaagctctccgtctccaccgtcagctcctccggagtggccgtcacttcc 219 | || ||| ||||| ||| |||| || || |||| || ||||||||||| | ||||| Sbjct: 80 agctccgatcagaaactcaccgtttcttcctacagcaccgccggagtggcccttacttca 139 Query: 220 acagctgtgaagaaaggagggcttt 244 || |||||||| |||||||| |||| Sbjct: 140 actgctgtgaaaaaaggaggacttt 164 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 385 cctgattacaatgctggaaaggtggaggtgcaatacttccatgac 429 |||||||| ||| |||| ||| | ||||| ||||||||||||||| Sbjct: 305 cctgattataattctggcaagttagaggttcaatacttccatgac 349 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 tacaagtataagaatactcttgttgatgtcaaa 300 |||||||||||||| || ||| ||||||||||| Sbjct: 188 tacaagtataagaacacccttattgatgtcaaa 220
>emb|X73429.1|ZMPOR1 Z.mays mRNA for porin Length = 1810 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 106 ggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 21 ggcctctacaccgacatcggcaagaagaccagagatctgct 61
>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1179 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 106 ggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||||| |||||| |||||||||||| ||| ||||||||| Sbjct: 105 ggcctctacaccgagatcggcaagaagaccagggatctgct 145
>gb|AY109870.1| Zea mays CL2099_1 mRNA sequence Length = 1799 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 106 ggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 21 ggcctctacaccgacatcggcaagaagaccagagatctgct 61
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence Length = 926 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 106 ggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||||| ||||||||||||||||||| ||| |||||||| Sbjct: 141 ggcctctacaccgacatcggcaagaagaccagagatctgct 181
>gb|AY104870.1| Zea mays PCO081914 mRNA sequence Length = 1445 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 106 ggcctcttcaccgacatcggcaagaaggccaaggatctgct 146 ||||||| |||||| |||||||||||| ||| ||||||||| Sbjct: 216 ggcctctacaccgagatcggcaagaagaccagggatctgct 256
>ref|NM_126150.2| Arabidopsis thaliana voltage-gated ion-selective channel AT5G67500 mRNA, complete cds Length = 1251 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctg 144 ||||||||||| ||||||||||| ||||| |||||| Sbjct: 79 ctcttcaccgatatcggcaagaaagccaaagatctg 114
>emb|BX831892.1|CNS09ZOZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZD11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1000 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctg 144 ||||||||||| ||||||||||| ||||| |||||| Sbjct: 60 ctcttcaccgatatcggcaagaaagccaaagatctg 95
>gb|AY085100.1| Arabidopsis thaliana clone 12964 mRNA, complete sequence Length = 1106 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctg 144 ||||||||||| ||||||||||| ||||| |||||| Sbjct: 79 ctcttcaccgatatcggcaagaaagccaaagatctg 114
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 121 atcggcaagaaggccaaggatctgctcaccagggactac 159 |||||||||||||||| ||||||||| |||||||||| Sbjct: 117 atcggcaagaaggccagggatctgctgtacagggactac 155
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 |||| ||||||||||||||||||| ||| |||||||| |||||||||| Sbjct: 13 ctctacaccgacatcggcaagaagaccagagatctgctttacagggactac 63
>gb|BT014367.1| Lycopersicon esculentum clone 133653F, mRNA sequence Length = 1204 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 268 tacaagtataagaatactcttgttgatgtcaaagtggatacag 310 ||||| |||||||||||| | ||||||||||||| ||||||| Sbjct: 254 tacaaatataagaatactttaattgatgtcaaagttgatacag 296
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 |||| ||||||||||||||||||| ||| |||||||| |||||||||| Sbjct: 86 ctctacaccgacatcggcaagaagaccagagatctgctttacagggactac 136
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 121 atcggcaagaaggccaaggatctgctcaccagggactac 159 |||||||||||||||| ||||||||| |||||||||| Sbjct: 54 atcggcaagaaggccagggatctgctgtacagggactac 92
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 |||| ||||||||||||||||||| ||| |||||||| |||||||||| Sbjct: 91 ctctacaccgacatcggcaagaagaccagagatctgctttacagggactac 141
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 |||| ||||||||||||||||||| ||| |||||||| |||||||||| Sbjct: 102 ctctacaccgacatcggcaagaagaccagagatctgctttacagggactac 152
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 121 atcggcaagaaggccaaggatctgctcaccagggactac 159 |||||||||||||||| ||||||||| |||||||||| Sbjct: 111 atcggcaagaaggccagggatctgctgtacagggactac 149
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctgctcaccagggactac 159 |||| ||||||||||||||||||| ||| |||||||| |||||||||| Sbjct: 146 ctctacaccgacatcggcaagaagaccagagatctgctttacagggactac 196
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 121 atcggcaagaaggccaaggatctgctcaccagggactac 159 |||||||||||||||| ||||||||| |||||||||| Sbjct: 117 atcggcaagaaggccagggatctgctgtacagggactac 155
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Plus Query: 121 atcggcaagaaggccaaggatctgctcaccagggactac 159 |||||||||||||||| ||||||||| |||||||||| Sbjct: 131 atcggcaagaaggccagggatctgctgtacagggactac 169
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 121 atcggcaagaaggccaaggatct 143 ||||||||||||||||||||||| Sbjct: 79 atcggcaagaaggccaaggatct 101
>gb|BC101817.1| Homo sapiens ornithine aminotransferase-like 1, transcript variant 2, mRNA (cDNA clone MGC:126866 IMAGE:8069323), complete cds Length = 2190 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 137 ctcgctcctcctcctcagcggccgcc 112
>gb|BC101819.1| Homo sapiens ornithine aminotransferase-like 1, transcript variant 2, mRNA (cDNA clone MGC:126868 IMAGE:8069325), complete cds Length = 2190 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 137 ctcgctcctcctcctcagcggccgcc 112
>gb|BC052609.1| Homo sapiens cDNA clone IMAGE:6256605 Length = 2225 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 156 ctcgctcctcctcctcagcggccgcc 131
>ref|XM_528969.1| PREDICTED: Pan troglodytes similar to located at OATL1 (LOC473597), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 100 ctcgctcctcctcctcagcggccgcc 75
>gb|AF196969.3| Homo sapiens chromosome X clone LL0XNC01-30I04 map p11.23, complete sequence Length = 40403 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 18271 ctcgctcctcctcctcagcggccgcc 18246
>ref|NM_002536.1| Homo sapiens ornithine aminotransferase-like 1 (OATL1), transcript variant 2, mRNA Length = 2359 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 133 ctcgctcctcctcctcagcggccgcc 108
>ref|NM_001006113.1| Homo sapiens ornithine aminotransferase-like 1 (OATL1), transcript variant 1, mRNA Length = 2227 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 156 ctcgctcctcctcctcagcggccgcc 131
>ref|XM_990931.1| PREDICTED: Mus musculus kelch repeat and BTB (POZ) domain containing 9 (Kbtbd9), mRNA Length = 6713 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 55 ctcctcctcctccgccgccgcctcccggcagccc 22
>ref|XM_978355.1| PREDICTED: Mus musculus kelch repeat and BTB (POZ) domain containing 9 (Kbtbd9), mRNA Length = 7030 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 373 ctcctcctcctccgccgccgcctcccggcagccc 340
>ref|XM_906219.2| PREDICTED: Mus musculus kelch repeat and BTB (POZ) domain containing 9 (Kbtbd9), mRNA Length = 7030 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 373 ctcctcctcctccgccgccgcctcccggcagccc 340
>gb|BC065168.1| Mus musculus kelch repeat and BTB (POZ) domain containing 9, mRNA (cDNA clone IMAGE:6405859), partial cds Length = 5456 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 387 ctcctcctcctccgccgccgcctcccggcagccc 354
>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds Length = 1203 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctgct 146 |||| ||| |||||||||||||| |||| ||||||||| Sbjct: 98 ctctacactgacatcggcaagaaagccagggatctgct 135 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 398 ctggaaaggtggaggtgcaatacttccatgac 429 |||||||||||||| | |||||||| |||||| Sbjct: 387 ctggaaaggtggagcttcaatacttgcatgac 418
>gb|BC064334.1| Homo sapiens ornithine aminotransferase-like 1, mRNA (cDNA clone IMAGE:5808220), partial cds Length = 2332 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 133 ctcgctcctcctcctcagcggccgcc 108
>ref|XM_533729.2| PREDICTED: Canis familiaris similar to Mitochondrial 28S ribosomal protein S25 (S25mt) (MRP-S25) (LOC476523), mRNA Length = 1035 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccatgaaggg 101 ||||||||||||||| |||||||||| Sbjct: 331 gccgccgccgccatgcccatgaaggg 356
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 ctccccgcagcccctcccccaa 75 |||||||||||||||||||||| Sbjct: 143227 ctccccgcagcccctcccccaa 143248
>gb|BC041614.1| Homo sapiens ornithine aminotransferase-like 1, mRNA (cDNA clone IMAGE:5812218), with apparent retained intron Length = 2332 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 133 ctcgctcctcctcctcagcggccgcc 108
>ref|XM_848594.1| PREDICTED: Canis familiaris similar to crystallin, zeta (LOC610994), mRNA Length = 1590 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 ccccaagccgccgccgccatgg 91 |||||||||||||||||||||| Sbjct: 182 ccccaagccgccgccgccatgg 161
>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence Length = 209280 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 33146 ctcctcctcctccgccgccgcctcccggcagccc 33113
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 cctcctcctcggcggccgcctc 56 |||||||||||||||||||||| Sbjct: 275686 cctcctcctcggcggccgcctc 275707
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 8 ccctctccacccttttcgttcctcgctcctcctc 41 ||||||||| |||| | ||||||||||||||||| Sbjct: 16700144 ccctctccaaccttgttgttcctcgctcctcctc 16700177 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 874162 ccgccgccgccatggccatg 874181
>gb|BC082255.1| Homo sapiens ornithine aminotransferase-like 1, mRNA (cDNA clone IMAGE:6292504) Length = 2332 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcc 54 |||||||||||||||| ||||||||| Sbjct: 133 ctcgctcctcctcctcagcggccgcc 108
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 8 ccctctccacccttttcgttcctcgctcctcctc 41 ||||||||| |||| | ||||||||||||||||| Sbjct: 48838 ccctctccaaccttgttgttcctcgctcctcctc 48871
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 8 ccctctccacccttttcgttcctcgctcctcctc 41 ||||||||| |||| | ||||||||||||||||| Sbjct: 108283 ccctctccaaccttgttgttcctcgctcctcctc 108316
>ref|NM_210813.1| Eremothecium gossypii AFL089Cp (AFL089C), mRNA Length = 501 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 35 cctcctcctcggcggccgcctc 56 |||||||||||||||||||||| Sbjct: 274 cctcctcctcggcggccgcctc 253
>dbj|AK068574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155A20, full insert sequence Length = 2643 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 8 ccctctccacccttttcgttcctcgctcctcctc 41 ||||||||| |||| | ||||||||||||||||| Sbjct: 264 ccctctccaaccttgttgttcctcgctcctcctc 297
>dbj|AK122572.1| Mus musculus mRNA for mKIAA1921 protein Length = 5070 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 40 ctcctcctcctccgccgccgcctcccggcagccc 7
>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete sequence Length = 199060 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctccccgcagccc 66 |||||||||||| || |||||||||| ||||||| Sbjct: 21034 ctcctcctcctccgccgccgcctcccggcagccc 21067
>ref|NM_191023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tcctcctcggcggccgcctcc 57 ||||||||||||||||||||| Sbjct: 466 tcctcctcggcggccgcctcc 446
>gb|BT016509.1| Zea mays clone Contig342 mRNA sequence Length = 1237 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 gctcctcctcctcggcggccg 52 ||||||||||||||||||||| Sbjct: 916 gctcctcctcctcggcggccg 896
>ref|XM_606606.2| PREDICTED: Bos taurus similar to Mitochondrial 28S ribosomal protein S25 (S25mt) (MRP-S25) (LOC528194), mRNA Length = 510 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatgaaggg 101 |||||||||||||| |||||||||| Sbjct: 281 ccgccgccgccatgcccatgaaggg 305
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 18618 gccgccgccgccatggccatg 18638
>ref|XM_363668.1| Magnaporthe grisea 70-15 hypothetical protein (MG01594.4) partial mRNA Length = 990 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 cctcggcggccgcctccccgc 61 ||||||||||||||||||||| Sbjct: 324 cctcggcggccgcctccccgc 344
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 30 tcgctcctcctcctcggcggccgcc 54 ||||||||||||| ||||||||||| Sbjct: 2067243 tcgctcctcctccgcggcggccgcc 2067219
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 131447 gccgccgccgccatggccatg 131467
>ref|NM_018779.1| Mus musculus phosphodiesterase 3A, cGMP inhibited (Pde3a), mRNA Length = 4205 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 621 ctcctcctcctcggccgccgcctcc 597
>ref|XM_446420.1| Candida glabrata CBS138, CAGL0G01342g partial mRNA Length = 3231 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 tctccgtctccaccgtcagct 196 ||||||||||||||||||||| Sbjct: 37 tctccgtctccaccgtcagct 17
>gb|AC123065.3| Mus musculus BAC clone RP23-239F13 from 9, complete sequence Length = 158137 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 gaagaaaggagggctttattctctt 252 ||||||||||||||||| ||||||| Sbjct: 25411 gaagaaaggagggctttcttctctt 25435
>emb|CR663459.2|CNS0FAW9 Tetraodon nigroviridis full-length cDNA Length = 1130 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctcc 57 |||||||||| |||||||||||||| Sbjct: 197 ctcctcctccgcggcggccgcctcc 221
>gb|AC164088.2| Mus musculus BAC clone RP23-65F24 from chromosome 16, complete sequence Length = 240181 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 45 ggcggccgcctccccgcagcccctccccc 73 ||||||||||||||||||| |||| |||| Sbjct: 126416 ggcggccgcctccccgcaggccctgcccc 126444
>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence Length = 145382 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 268 tacaagtataagaatactcttgttgatgtcaaa 300 |||||||||||||| || ||| ||||||||||| Sbjct: 124031 tacaagtataagaacacccttattgatgtcaaa 124063 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 97 aagggaccgggcctcttcaccgacatcggcaagaaggccaa 137 ||||||||||| |||| | |||| ||||||||||| ||||| Sbjct: 122049 aagggaccgggtctctactccgatatcggcaagaaagccaa 122089
>emb|AL390791.15| Human DNA sequence from clone RP11-204A14 on chromosome 9, complete sequence Length = 177425 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 aatgctggaaaggtggaggtg 414 ||||||||||||||||||||| Sbjct: 68745 aatgctggaaaggtggaggtg 68725
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 tctccgtctccaccgtcagct 196 ||||||||||||||||||||| Sbjct: 129374 tctccgtctccaccgtcagct 129394
>tpg|BK000846.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M251, complete sequence Length = 3880 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tcctcctcggcggccgcctcc 57 ||||||||||||||||||||| Sbjct: 2754 tcctcctcggcggccgcctcc 2734
>gb|AF099187.1| Mus musculus cGMP-inhibited phosphodiesterase (PDE3A) mRNA, complete cds Length = 4205 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 621 ctcctcctcctcggccgccgcctcc 597
>gb|AC104798.4| Homo sapiens BAC clone RP11-328N8 from 4, complete sequence Length = 132337 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 tcttgatgtagcttcagctta 269 ||||||||||||||||||||| Sbjct: 3618 tcttgatgtagcttcagctta 3598
>dbj|AK148233.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370062D05 product:hypothetical protein, full insert sequence Length = 2172 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 45 ggcggccgcctccccgcagcccctccccc 73 ||||||||||||||||||| |||| |||| Sbjct: 1266 ggcggccgcctccccgcaggccctgcccc 1294
>dbj|AK148225.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370060F12 product:hypothetical protein, full insert sequence Length = 3004 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 45 ggcggccgcctccccgcagcccctccccc 73 ||||||||||||||||||| |||| |||| Sbjct: 145 ggcggccgcctccccgcaggccctgcccc 173
>ref|NM_017337.1| Rattus norvegicus phosphodiesterase 3A (Pde3a), mRNA Length = 3426 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 300 ctcctcctcctcggccgccgcctcc 276
>gb|BC108214.1| Bos taurus cDNA clone MGC:134542 IMAGE:8066167, complete cds Length = 858 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatgaaggg 101 |||||||||||||| |||||||||| Sbjct: 101 ccgccgccgccatgcccatgaaggg 125
>gb|AC009995.9|AC009995 Homo sapiens chromosome 8, clone RP11-373H15, complete sequence Length = 174037 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 ctctgaccctctccacccttt 22 ||||||||||||||||||||| Sbjct: 130519 ctctgaccctctccacccttt 130499
>dbj|AK089148.1| Mus musculus 10 days neonate olfactory brain cDNA, RIKEN full-length enriched library, clone:E530016L24 product:phosphodiesterase 3A, cGMP inhibited, full insert sequence Length = 1592 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 123 ctcctcctcctcggccgccgcctcc 147
>emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chromosome X, complete sequence Length = 120359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 ataagaatactcttgttgatg 295 ||||||||||||||||||||| Sbjct: 25408 ataagaatactcttgttgatg 25428
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 ctcgctcctcctcctcggcggccgcctcc 57 ||||||||||||||||| |||||||||| Sbjct: 9777126 ctcgctcctcctcctcgcgggccgcctcc 9777154 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 2947602 gccgccgccgccatggccatg 2947582 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cccctcccccaagccgccgccgcc 87 ||||||| |||||||||||||||| Sbjct: 18139700 cccctcctccaagccgccgccgcc 18139723
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 16490848 gccgccgccgccatggccatg 16490868
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cgccgccgccatggccatgaa 98 ||||||||||||||||||||| Sbjct: 1074097 cgccgccgccatggccatgaa 1074077 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 20981267 gccgccgccgccatggccat 20981248
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tcctcctcggcggccgcctcc 57 ||||||||||||||||||||| Sbjct: 34360498 tcctcctcggcggccgcctcc 34360478 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 40096319 tcctcctcctcggcggccgc 40096338 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 ctcttcaccgacatcggcaagaag 132 |||| ||||||||||||||||||| Sbjct: 22906641 ctctacaccgacatcggcaagaag 22906618 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cgctcctcctcctcggcggc 50 |||||||||||||||||||| Sbjct: 22805839 cgctcctcctcctcggcggc 22805820
>gb|AC103831.4| Homo sapiens chromosome 8, clone RP11-1023P17, complete sequence Length = 206357 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ctctgaccctctccacccttt 22 ||||||||||||||||||||| Sbjct: 1845 ctctgaccctctccacccttt 1865
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 194383 ctcctcctcctcggccgccgcctcc 194359
>gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199439 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 24314 ctcctcctcctcggccgccgcctcc 24290
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccatgaagg 100 |||||||||| |||||||||||||| Sbjct: 3106319 gccgccgccgacatggccatgaagg 3106295 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 cctcctcctcggcggccgcct 55 ||||||||||||||||||||| Sbjct: 1599517 cctcctcctcggcggccgcct 1599537 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cctcctcctcggcggccgcc 54 |||||||||||||||||||| Sbjct: 4637685 cctcctcctcggcggccgcc 4637666
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tcctcctcggcggccgcctcc 57 ||||||||||||||||||||| Sbjct: 42842 tcctcctcggcggccgcctcc 42822
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cgccgccgccatggccatgaa 98 ||||||||||||||||||||| Sbjct: 26621 cgccgccgccatggccatgaa 26601
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cgccgccgccatggccatgaa 98 ||||||||||||||||||||| Sbjct: 62805 cgccgccgccatggccatgaa 62785
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 2204971 gccgccgccgccatggccatg 2204951
>dbj|AB013390.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9I9 Length = 51860 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaa 137 ||||||||||| ||||||||||| ||||| Sbjct: 14407 ctcttcaccgatatcggcaagaaagccaa 14435
>dbj|AK119363.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-G10, full insert sequence Length = 3480 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 tcctcctcggcggccgcctcc 57 ||||||||||||||||||||| Sbjct: 3146 tcctcctcggcggccgcctcc 3126
>gb|AC147636.3| Mus musculus BAC clone RP23-201C3 from 9, complete sequence Length = 202197 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 gaagaaaggagggctttattctctt 252 ||||||||||||||||| ||||||| Sbjct: 5082 gaagaaaggagggctttcttctctt 5106
>gb|AY108693.1| Zea mays PCO078930 mRNA sequence Length = 735 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 29 ctcgctcctcctcctcggcggccgcctcc 57 |||||||||||||||| || ||||||||| Sbjct: 529 ctcgctcctcctcctccgccgccgcctcc 501
>emb|AL133445.4|CNS01DV1 Human chromosome 14 DNA sequence BAC R-1046B16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 190946 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 tctctgaccctctccaccctt 21 ||||||||||||||||||||| Sbjct: 153167 tctctgaccctctccaccctt 153187
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 16581853 gccgccgccgccatggccatg 16581873
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 ctcgctcctcctcctcggcggccgcctcc 57 ||||||||||||||||| |||||||||| Sbjct: 9777011 ctcgctcctcctcctcgcgggccgcctcc 9777039 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 2947546 gccgccgccgccatggccatg 2947526 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cccctcccccaagccgccgccgcc 87 ||||||| |||||||||||||||| Sbjct: 18066021 cccctcctccaagccgccgccgcc 18066044
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccatg 96 ||||||||||||||||||||| Sbjct: 68500 gccgccgccgccatggccatg 68520
>emb|AL928779.3|CNS08CC9 Oryza sativa chromosome 12, . BAC OSJNBa0054I14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148089 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 29 ctcgctcctcctcctcggcggccgcctcc 57 ||||||||||||||||| |||||||||| Sbjct: 103083 ctcgctcctcctcctcgcgggccgcctcc 103111
>gb|U38179.1|RNU38179 Rattus norvegicus cyclic nucleotide phosphodiesterase (RNPDE3A) mRNA, complete cds Length = 3426 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctcc 57 ||||||||||||||| ||||||||| Sbjct: 300 ctcctcctcctcggccgccgcctcc 276
>ref|XM_629602.1| Dictyostelium discoideum hypothetical protein (DDB0219746), partial mRNA Length = 1020 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 aatactcttgttgatgtcaaagtg 303 ||||||||||||||||| |||||| Sbjct: 382 aatactcttgttgatgtaaaagtg 359
>ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA Length = 839 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 713 gccgccgccgccatggccat 694
>ref|XM_468567.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 900 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctccccg 60 |||||||||||| |||||||||||||| Sbjct: 81 ctcctcctcctcttcggccgcctccccg 108
>ref|XM_466195.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 100 gccgccgccgccatggccat 119
>ref|XM_449996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1306 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 308 ccgccgccgccatggccatg 327
>ref|XM_507424.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1342 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 341 ccgccgccgccatggccatg 360
>ref|XM_507423.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1346 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 341 ccgccgccgccatggccatg 360
>ref|XM_507422.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1666 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 342 ccgccgccgccatggccatg 361
>ref|XM_506631.2| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA Length = 1347 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 384 ccgccgccgccatggccatg 403
>ref|XM_463619.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3303 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 2192 tcctcctcctcggcggccgc 2173
>ref|NM_192536.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1446 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cgctcctcctcctcggcggc 50 |||||||||||||||||||| Sbjct: 959 cgctcctcctcctcggcggc 978
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 47244 gccgccgccgccatggccat 47225
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 84925 tcctcctcctcggcggccgc 84944
>gb|AC150847.5| Bos taurus BAC CH240-372I17 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 134331 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 acaatgctggaaaggtggag 411 |||||||||||||||||||| Sbjct: 127756 acaatgctggaaaggtggag 127775
>gb|AC008325.5| Drosophila melanogaster clone BACR05M06, complete sequence Length = 166423 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cttttgctgccgccgttggc 456 |||||||||||||||||||| Sbjct: 122166 cttttgctgccgccgttggc 122147
>ref|XM_367703.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07614.4) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 470 tcctcctcctcggcggccgc 451
>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence Length = 153426 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 acgtctgtcaagtttcctga 389 |||||||||||||||||||| Sbjct: 21767 acgtctgtcaagtttcctga 21786
>gb|BC033242.1| Homo sapiens methyl-CpG binding domain protein 1, transcript variant 3, mRNA (cDNA clone MGC:45928 IMAGE:5432943), complete cds Length = 2643 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgcctcc 57 ||||||||||| |||||||||||| Sbjct: 44 tcctcctcctccgcggccgcctcc 21
>ref|XM_954597.1| Neurospora crassa OR74A hypothetical protein (NCU09579.1) partial mRNA Length = 1062 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ccaccgtcagctcctccgga 204 |||||||||||||||||||| Sbjct: 751 ccaccgtcagctcctccgga 732
>ref|XM_329937.1| Neurospora crassa OR74A hypothetical protein (NCU09579.1) partial mRNA Length = 1062 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ccaccgtcagctcctccgga 204 |||||||||||||||||||| Sbjct: 751 ccaccgtcagctcctccgga 732
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aagccgccgccgccatggcc 93 |||||||||||||||||||| Sbjct: 635007 aagccgccgccgccatggcc 634988
>gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS221 mRNA, complete cds Length = 1070 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 742 gccgccgccgccatggccat 723
>gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS217 mRNA, complete cds Length = 1028 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 713 gccgccgccgccatggccat 694
>gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS212 mRNA, complete cds Length = 1095 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 695 gccgccgccgccatggccat 676
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 5852 gccgccgccgccatggccat 5833
>gb|BC063664.1| Homo sapiens DNA2 DNA replication helicase 2-like (yeast), mRNA (cDNA clone IMAGE:3846907), partial cds Length = 3484 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 385 tggatacagaatcaaatatc 366
>ref|XM_542055.2| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 1 (LOC484939), mRNA Length = 1914 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 cctcctcggcggccgcctccccgc 61 |||||||||| ||||||||||||| Sbjct: 210 cctcctcggccgccgcctccccgc 187
>ref|XM_848511.1| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 2 (LOC484939), mRNA Length = 2233 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 cctcctcggcggccgcctccccgc 61 |||||||||| ||||||||||||| Sbjct: 210 cctcctcggccgccgcctccccgc 187
>gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome 3, complete sequence Length = 165047 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tccacagctgtgaagaaagg 236 |||||||||||||||||||| Sbjct: 155884 tccacagctgtgaagaaagg 155865
>gb|AF120979.1|HS1MBD1 Homo sapiens methyl-CpG binding protein 1 (MBD1) gene, exon 1 Length = 1845 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgcctcc 57 ||||||||||| |||||||||||| Sbjct: 910 tcctcctcctccgcggccgcctcc 887
>ref|XM_764947.1| Giardia lamblia ATCC 50803 pyruvate ferredoxin oxidoreductase (GLP_77_30661_27062) partial mRNA Length = 3600 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aggccaaggatctgctcacc 150 |||||||||||||||||||| Sbjct: 2915 aggccaaggatctgctcacc 2934
>gb|AC003078.1| Homo sapiens BAC clone GS1-117O10 from 7, complete sequence Length = 182433 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 acttccacagctgtgaagaaagga 237 |||| ||||||||||||||||||| Sbjct: 109917 acttacacagctgtgaagaaagga 109894
>gb|AC142298.1| Pan troglodytes BAC clone RP43-99N14 from 7, complete sequence Length = 162900 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 acttccacagctgtgaagaaagga 237 |||| ||||||||||||||||||| Sbjct: 95008 acttacacagctgtgaagaaagga 94985
>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence Length = 117113 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agtataagaatactcttgtt 291 |||||||||||||||||||| Sbjct: 45538 agtataagaatactcttgtt 45557
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 4070722 gccgccgccgccatggccat 4070703
>emb|AL136233.14| Human DNA sequence from clone RP11-9E13 on chromosome 10 Contains the 5' end of the RUFY2 gene for RUN and FYVE domain containing 2 (FLJ36895, FLJ10063), the DNA2L gene for DNA2 DNA replication helicase 2-like (yeast) (KIAA0083), a ribosomal protein L26 (RPL26) pseudogene, a novel gene and two CpG islands, complete sequence Length = 138733 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 124171 tggatacagaatcaaatatc 124190
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 65240 gccgccgccgccatggccat 65259
>gb|AC090246.9| Homo sapiens chromosome 18, clone RP11-699C17, complete sequence Length = 176433 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgcctcc 57 ||||||||||| |||||||||||| Sbjct: 10737 tcctcctcctccgcggccgcctcc 10714
>emb|X53837.1|DMNEUROT Drosophila mRNA for neurotactin Length = 3553 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 gctcctcctcctcggcggcc 51 |||||||||||||||||||| Sbjct: 1421 gctcctcctcctcggcggcc 1402
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 acacctacgaccagaagctc 177 |||||||||||||||||||| Sbjct: 211083 acacctacgaccagaagctc 211102
>emb|AJ301641.1|FRU301641 Fugu rubripes ORF1 (partial), ORF2-4 DNA and lsm4 gene Length = 36154 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ctctccgtctccaccgtcagctcc 198 |||||| ||||||||||||||||| Sbjct: 1582 ctctccttctccaccgtcagctcc 1605
>emb|CR858402.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1432 (from clone DKFZp459N1432) Length = 3145 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgcctcc 57 ||||||||||| |||||||||||| Sbjct: 70 tcctcctcctccgcggccgcctcc 47
>gb|AC008733.9| Homo sapiens chromosome 19 clone CTD-2525J15, complete sequence Length = 189486 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cctcccccaagccgccgccg 85 |||||||||||||||||||| Sbjct: 187047 cctcccccaagccgccgccg 187066
>dbj|D42046.1|HUMKIAAJ Homo sapiens KIAA0083 mRNA, partial cds Length = 4207 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 414 tggatacagaatcaaatatc 395
>emb|CR606021.1| full-length cDNA clone CS0DL001YM13 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 2414 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 107 tggatacagaatcaaatatc 88
>gb|AC105227.6| Homo sapiens chromosome 18, clone RP11-1030E3, complete sequence Length = 185568 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgcctcc 57 ||||||||||| |||||||||||| Sbjct: 146172 tcctcctcctccgcggccgcctcc 146149
>dbj|AK147179.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920194N04 product:serine/threonine kinase receptor associated protein, full insert sequence Length = 2647 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 265 cgccgccgccatggccatga 284
>ref|XM_938629.1| PREDICTED: Homo sapiens DNA2 DNA replication helicase 2-like (yeast) (DNA2L), mRNA Length = 4410 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 621 tggatacagaatcaaatatc 602
>ref|XM_166103.6| PREDICTED: Homo sapiens DNA2 DNA replication helicase 2-like (yeast) (DNA2L), mRNA Length = 4410 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 621 tggatacagaatcaaatatc 602
>dbj|AK145971.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530019I23 product:serine/threonine kinase receptor associated protein, full insert sequence Length = 2595 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 216 cgccgccgccatggccatga 235
>gb|AC009194.9| Homo sapiens, clone RP11-44B13, complete sequence Length = 179203 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 cctcccccaagccgccgccg 85 |||||||||||||||||||| Sbjct: 22214 cctcccccaagccgccgccg 22195
>dbj|AK152283.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830058G22 product:serine/threonine kinase receptor associated protein, full insert sequence Length = 1653 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 114 cgccgccgccatggccatga 133
>gb|DQ058201.1| Trifolium pratense clone tp44 microsatellite sequence Length = 275 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 97 aagggaccgggcctcttcaccgacatcggcaagaaggcca 136 ||||||||||| |||| | |||| ||||||||||| |||| Sbjct: 133 aagggaccgggtctctactccgatatcggcaagaaagcca 94
>dbj|AK154158.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630005E11 product:serine/threonine kinase receptor associated protein, full insert sequence Length = 2611 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 232 cgccgccgccatggccatga 251
>gb|AC010632.7| Homo sapiens chromosome 19 clone CTD-2293H3, complete sequence Length = 111221 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cctcccccaagccgccgccg 85 |||||||||||||||||||| Sbjct: 8835 cctcccccaagccgccgccg 8854
>dbj|AK077504.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730424L20 product:serine/threonine kinase receptor associated protein, full insert sequence Length = 1931 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 216 cgccgccgccatggccatga 235
>dbj|AK075804.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810063O13 product:serine/threonine kinase receptor associated protein, full insert sequence Length = 1682 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 222 cgccgccgccatggccatga 241
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 24867720 gccgccgccgccatggccat 24867739
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 24802942 tcctcctcctcggcggccgc 24802961
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 51352 gccgccgccgccatggccat 51371
>emb|BX841617.1|CNS09YKR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB22ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1039 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaagaaggccaaggatctg 144 ||||||||||| |||||||||| ||||| |||||| Sbjct: 38 ctcttcaccgatatcggcaagatagccaaagatctg 73
>ref|NM_174474.1| Bos taurus troponin T1, skeletal, slow (TNNT1), mRNA Length = 887 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctc 56 ||||||||||||||||||| |||| Sbjct: 80 ctcctcctcctcggcggcctcctc 57
>gb|AC137627.10| Homo sapiens 12 BAC RP11-592H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155345 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgcagcccctcccccaagcc 78 |||||||||||||||||||| Sbjct: 34730 cgcagcccctcccccaagcc 34711
>gb|AC007539.8| Homo sapiens 12 BAC RCPI11-935C2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177147 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgcagcccctcccccaagcc 78 |||||||||||||||||||| Sbjct: 110135 cgcagcccctcccccaagcc 110116
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 ctcttcaccgacatcggcaagaag 132 |||| ||||||||||||||||||| Sbjct: 110198 ctctacaccgacatcggcaagaag 110175 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cgctcctcctcctcggcggc 50 |||||||||||||||||||| Sbjct: 9396 cgctcctcctcctcggcggc 9377
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 39403 tcctcctcctcggcggccgc 39422
>ref|XM_575708.1| PREDICTED: Rattus norvegicus serine/threonine kinase receptor associated protein (predicted) (Strap_predicted), mRNA Length = 1732 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 196 cgccgccgccatggccatga 215
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ctcttcaccgacatcggcaa 128 |||||||||||||||||||| Sbjct: 2685151 ctcttcaccgacatcggcaa 2685170
>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0646B04 Length = 178896 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 38289 ccgccgccgccatggccatg 38308
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 cgctcctcctcctcggcggc 50 |||||||||||||||||||| Sbjct: 123228 cgctcctcctcctcggcggc 123209
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 104739 gccgccgccgccatggccat 104720
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 102171 gccgccgccgccatggccat 102190
>dbj|AK121793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095G14, full insert sequence Length = 1347 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 384 ccgccgccgccatggccatg 403
>dbj|AK121341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120M11, full insert sequence Length = 3825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 2376 tcctcctcctcggcggccgc 2357
>dbj|AK120034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B04, full insert sequence Length = 1342 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 341 ccgccgccgccatggccatg 360
>dbj|AK112118.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C11, full insert sequence Length = 932 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 699 gccgccgccgccatggccat 680
>dbj|AK111621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109P12, full insert sequence Length = 931 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 697 gccgccgccgccatggccat 678
>dbj|AK103978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H08, full insert sequence Length = 1306 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 308 ccgccgccgccatggccatg 327
>dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E14, full insert sequence Length = 1284 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 878 gccgccgccgccatggccat 859
>dbj|AK100123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007O11, full insert sequence Length = 1263 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctccccg 60 |||||||||||| |||||||||||||| Sbjct: 163 ctcctcctcctcttcggccgcctccccg 190
>emb|AJ326632.1|HSA326632 Homo sapiens genomic sequence surrounding NotI site, clone NL4-BA17R Length = 612 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cggccgcctccccgcagccc 66 |||||||||||||||||||| Sbjct: 50 cggccgcctccccgcagccc 31
>emb|AJ132338.1|HSA132338 Homo sapiens MBD1 CpG island, subclones P2, P3 and P6, genomic MseI fragments Length = 2951 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgcctcc 57 ||||||||||| |||||||||||| Sbjct: 2016 tcctcctcctccgcggccgcctcc 1993
>dbj|AK072252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008H21, full insert sequence Length = 1961 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 100 gccgccgccgccatggccat 119
>dbj|AK069551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025O15, full insert sequence Length = 1164 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctccccg 60 |||||||||||| |||||||||||||| Sbjct: 167 ctcctcctcctcttcggccgcctccccg 194
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cctcctcggcggccgcctcc 57 |||||||||||||||||||| Sbjct: 3009533 cctcctcggcggccgcctcc 3009552
>dbj|AK068844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163O03, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 342 ccgccgccgccatggccatg 361
>dbj|AK067434.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F19, full insert sequence Length = 3860 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 134 tcctcctcctcggcggccgc 153
>gb|AC137151.3| Mus musculus BAC clone RP24-217N24 from 6, complete sequence Length = 177615 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 62372 cgccgccgccatggccatga 62391
>dbj|AK061402.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H09, full insert sequence Length = 1346 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ccgccgccgccatggccatg 96 |||||||||||||||||||| Sbjct: 341 ccgccgccgccatggccatg 360
>gb|AE003609.4| Drosophila melanogaster chromosome 2L, section 18 of 83 of the complete sequence Length = 319287 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cttttgctgccgccgttggc 456 |||||||||||||||||||| Sbjct: 232405 cttttgctgccgccgttggc 232386
>gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, complete sequence Length = 200020 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cacttccacagctgtgaaga 232 |||||||||||||||||||| Sbjct: 107570 cacttccacagctgtgaaga 107589
>dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like protein, complete cds, clone:E31254 Length = 1175 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 gccgccgccgccatggccat 95 |||||||||||||||||||| Sbjct: 853 gccgccgccgccatggccat 834
>dbj|AB085601.1| Bos taurus Tnnt1 mRNA for troponin T slow skeletal muscle type, complete cds, isoform:sTnT2 Length = 854 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctc 56 ||||||||||||||||||| |||| Sbjct: 80 ctcctcctcctcggcggcctcctc 57
>dbj|AB085600.1| Bos taurus Tnnt1 mRNA for troponin T slow skeletal muscle type, complete cds, isoform:sTnT1 Length = 887 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 ctcctcctcctcggcggccgcctc 56 ||||||||||||||||||| |||| Sbjct: 80 ctcctcctcctcggcggcctcctc 57
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 129441 tcctcctcctcggcggccgc 129460
>gb|AC099722.7| Mus musculus chromosome 3, clone RP23-282E13, complete sequence Length = 233425 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tccacagctgtgaagaaagg 236 |||||||||||||||||||| Sbjct: 50831 tccacagctgtgaagaaagg 50812
>gb|BC111740.1| Homo sapiens DNA2 DNA replication helicase 2-like (yeast), mRNA (cDNA clone MGC:133297 IMAGE:40038149), complete cds Length = 3207 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 tggatacagaatcaaatatc 321 |||||||||||||||||||| Sbjct: 452 tggatacagaatcaaatatc 433
>gb|BC083714.1| Rattus norvegicus serine/threonine kinase receptor associated protein, mRNA (cDNA clone MGC:94605 IMAGE:7190676), complete cds Length = 1755 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 196 cgccgccgccatggccatga 215
>dbj|D45890.1|RICSPS1 Oryza sativa DNA for sucrose phosphate synthase, complete cds Length = 9181 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 7018 tcctcctcctcggcggccgc 6999
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ctacgaccagaagctctccg 181 |||||||||||||||||||| Sbjct: 1976233 ctacgaccagaagctctccg 1976214
>gb|U33175.1|OSU33175 Oryza sativa sucrose phosphate synthase gene, complete cds Length = 7150 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcctcctcctcggcggccgc 53 |||||||||||||||||||| Sbjct: 5477 tcctcctcctcggcggccgc 5458
>ref|NM_001011969.1| Rattus norvegicus serine/threonine kinase receptor associated protein (Strap), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cgccgccgccatggccatga 97 |||||||||||||||||||| Sbjct: 196 cgccgccgccatggccatga 215
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cccctcccccaagccgccgccgcc 87 ||||||| |||||||||||||||| Sbjct: 93378 cccctcctccaagccgccgccgcc 93401
>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence Length = 179585 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 acgtctgtcaagtttcctga 389 |||||||||||||||||||| Sbjct: 24935 acgtctgtcaagtttcctga 24916
>emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chromosome X, complete sequence Length = 208695 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 agaaaggagggctttattct 249 |||||||||||||||||||| Sbjct: 179940 agaaaggagggctttattct 179921
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 33 ctcctcctcctcggcggccgcctccccg 60 |||||||||||| |||||||||||||| Sbjct: 66886 ctcctcctcctcttcggccgcctccccg 66913 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,650,414 Number of Sequences: 3902068 Number of extensions: 5650414 Number of successful extensions: 120802 Number of sequences better than 10.0: 218 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117724 Number of HSP's gapped (non-prelim): 3064 length of query: 466 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 444 effective length of database: 17,147,199,772 effective search space: 7613356698768 effective search space used: 7613356698768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)